id category name description provided_by BFO:0000002 biolink:NamedThing continuant An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts. NMDCO_relaxed.owl BFO:0000001 biolink:NamedThing entity NMDCO_relaxed.owl BFO:0000003 biolink:NamedThing occurrent An entity that has temporal parts and that happens, unfolds or develops through time. NMDCO_relaxed.owl GO:0005326 biolink:NamedThing neurotransmitter transmembrane transporter activity Enables the directed movement of a neurotransmitter into, out of or within a cell, or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell. NMDCO_relaxed.owl NCBITaxon:Union_0000023 biolink:NamedThing NMDCO_relaxed.owl NCBITaxon:Union_0000030 biolink:NamedThing NMDCO_relaxed.owl RO:0002532 biolink:NamedThing sequentially ordered entity Any entity that is ordered in discrete units along a linear axis. NMDCO_relaxed.owl SO:0000704 biolink:NamedThing NMDCO_relaxed.owl foaf:image biolink:NamedThing NMDCO_relaxed.owl BFO:0000004 biolink:NamedThing independent continuant A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything.|b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002]) NMDCO_relaxed.owl BFO:0000020 biolink:NamedThing characteristic A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same.|b is a relational specifically dependent continuant = Def. b is a specifically dependent continuant and there are n > 1 independent continuants c1, … cn which are not spatial regions are such that for all 1 i < j n, ci and cj share no common parts, are such that for each 1 i n, b s-depends_on ci at every time t during the course of b’s existence (axiom label in BFO2 Reference: [131-004])|b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003]) NMDCO_relaxed.owl BFO:0000031 biolink:NamedThing generically dependent continuant A continuant that is dependent on one or other independent continuant bearers. For every instance of A requires some instance of (an independent continuant type) B but which instance of B serves can change from time to time.|b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001]) NMDCO_relaxed.owl BFO:0000006 biolink:NamedThing spatial region NMDCO_relaxed.owl BFO:0000141 biolink:NamedThing immaterial entity NMDCO_relaxed.owl BFO:0000029 biolink:NamedThing site NMDCO_relaxed.owl BFO:0000140 biolink:NamedThing continuant fiat boundary b is a continuant fiat boundary = Def. b is an immaterial entity that is of zero, one or two dimensions and does not include a spatial region as part. (axiom label in BFO2 Reference: [029-001]) NMDCO_relaxed.owl UBERON:0000466 biolink:NamedThing immaterial anatomical entity Anatomical entity that has no mass. NMDCO_relaxed.owl BFO:0000008 biolink:NamedThing temporal region NMDCO_relaxed.owl BFO:0000011 biolink:NamedThing spatiotemporal region NMDCO_relaxed.owl BFO:0000015 biolink:NamedThing process An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t.|p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003]) NMDCO_relaxed.owl BFO:0000035 biolink:NamedThing process boundary p is a process boundary =Def. p is a temporal part of a process & p has no proper temporal parts. (axiom label in BFO2 Reference: [084-001]) NMDCO_relaxed.owl GO:0042391 biolink:NamedThing regulation of membrane potential Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane. NMDCO_relaxed.owl UBERON:0000000 biolink:NamedThing processual entity An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity. NMDCO_relaxed.owl BFO:0000016 biolink:NamedThing disposition NMDCO_relaxed.owl BFO:0000017 biolink:NamedThing realizable entity A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances. NMDCO_relaxed.owl BFO:0000023 biolink:NamedThing role A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts. NMDCO_relaxed.owl CHEBI:24432 biolink:NamedThing biological role A role played by the molecular entity or part thereof within a biological context. NMDCO_relaxed.owl CHEBI:33232 biolink:NamedThing application Intended use of the molecular entity or part thereof by humans. NMDCO_relaxed.owl CHEBI:51086 biolink:NamedThing chemical role A role played by the molecular entity or part thereof within a chemical context. NMDCO_relaxed.owl ENVO:01000665 biolink:NamedThing waste role A role that is realized in some process wherein the bearer is discarded or not utilized further. NMDCO_relaxed.owl ENVO:01001303 biolink:NamedThing environmental role A role which is may be realised by an environmental system NMDCO_relaxed.owl ENVO:06105109 biolink:NamedThing litter role A role which 1) inheres in a material entity 2) is realised when that entity is discarded outside waste management systems by humans or their technologies. NMDCO_relaxed.owl BFO:0000019 biolink:NamedThing quality NMDCO_relaxed.owl PATO:0000001 biolink:NamedThing quality A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities NMDCO_relaxed.owl BFO:0000024 biolink:NamedThing fiat object part NMDCO_relaxed.owl BFO:0000040 biolink:NamedThing material entity An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time. NMDCO_relaxed.owl BFO:0000027 biolink:NamedThing object aggregate NMDCO_relaxed.owl BFO:0000030 biolink:NamedThing object NMDCO_relaxed.owl CHEBI:24431 biolink:NamedThing chemical entity A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances. NMDCO_relaxed.owl CHEBI:36342 biolink:NamedThing subatomic particle A particle smaller than an atom. NMDCO_relaxed.owl ENVO:00000070 biolink:NamedThing human construction A construction that has been assembled by deliberate human effort. NMDCO_relaxed.owl ENVO:00003074 biolink:NamedThing manufactured product A material entity that has been processed by humans or their technology in any way, including intermediate products as well as final products. NMDCO_relaxed.owl ENVO:00010483 biolink:NamedThing environmental material A material entity which other material entities in an environmental system are primarily or partially composed of. NMDCO_relaxed.owl ENVO:01000281 biolink:NamedThing layer A material entity which 1) is spatially continuous, 2) is composed of material of comparable thickness, composition, and physical properties, and 3) is physically distinct from adjacent portions of environmental material. NMDCO_relaxed.owl ENVO:01000813 biolink:NamedThing astronomical body part A material part of an astronomical body. NMDCO_relaxed.owl ENVO:01001813 biolink:NamedThing construction A material entity which has been assembled through the intentional, instinctual, or deliberately programmed efforts of an organism or machine. NMDCO_relaxed.owl ENVO:03500005 biolink:NamedThing anthropogenic litter A material entity which has been discarded outside waste management systems by humans or their technologies. NMDCO_relaxed.owl GO:0005575 biolink:NamedThing cellular_component A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex). NMDCO_relaxed.owl GO:0005634 biolink:NamedThing nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. NMDCO_relaxed.owl NCBITaxon:1 biolink:NamedThing root NMDCO_relaxed.owl OBI:0000047 biolink:NamedThing processed material Is a material entity that is created or changed during material processing. NMDCO_relaxed.owl OBI:0100026 biolink:NamedThing organism A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs. NMDCO_relaxed.owl PCO:0000031 biolink:NamedThing organismal entity A material entity that is one or more organisms, viruses or viroids. NMDCO_relaxed.owl PO:0025131 biolink:NamedThing plant anatomical entity An anatomical entity that is or was part of a plant. NMDCO_relaxed.owl PR:000050567 biolink:NamedThing protein-containing material entity A material entity that minimally consists of a protein. NMDCO_relaxed.owl RO:0002577 biolink:NamedThing system A material entity consisting of multiple components that are causally integrated. NMDCO_relaxed.owl UBERON:0000465 biolink:NamedThing material anatomical entity Anatomical entity that has mass. NMDCO_relaxed.owl BFO:0000034 biolink:NamedThing function NMDCO_relaxed.owl ENVO:01000452 biolink:NamedThing environmental disposition A disposition which is realised by an environmental system or system parts thereof. NMDCO_relaxed.owl ENVO:01003001 biolink:NamedThing water-holding capacity A disposition of a material entity which is realised when it is saturated with liquid water. NMDCO_relaxed.owl ENVO:06105002 biolink:NamedThing thermoplasticity A disposition inhering in a bearer by virtue of that bearer's ability to, repeatedly, become plastic on heating and harden again on cooling. NMDCO_relaxed.owl ENVO:06105004 biolink:NamedThing thermosetting disposition A disposition which inheres in materials capable of becoming rigid when cured by heating. NMDCO_relaxed.owl ENVO:2000015 biolink:NamedThing energy A disposition which is realized during the execution of work, the emission of heat, or the possession of mass. NMDCO_relaxed.owl OGMS:0000031 biolink:NamedThing disease A disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism. NMDCO_relaxed.owl BFO:0000038 biolink:NamedThing one-dimensional temporal region NMDCO_relaxed.owl CHEBI:142163 biolink:NamedThing 24G7 epitope An antigenic epitope recognized by an anti-bilirubin monoclonal antibody designated 24G7. A substructure of bilirubin IXalpha, it is the region containing the oxo group at C-1, the methyl group at C-2, C-(4, 5, 6, 9), and N-21 and -22. NMDCO_relaxed.owl CHEBI:15355 biolink:NamedThing acetylcholine Actylcholine is an ester of acetic acid and choline, which acts as a neurotransmitter. NMDCO_relaxed.owl CHEBI:15379 biolink:NamedThing dioxygen NMDCO_relaxed.owl CHEBI:16134 biolink:NamedThing ammonia An azane that consists of a single nitrogen atom covelently bonded to three hydrogen atoms. NMDCO_relaxed.owl CHEBI:16189 biolink:NamedThing sulfate A sulfur oxoanion obtained by deprotonation of both OH groups of sulfuric acid. NMDCO_relaxed.owl CHEBI:16336 biolink:NamedThing hyaluronic acid A mucopolysaccharide composed of N-acetylglucosamine and glucuronic acid subunits. It is found in the connective tissues of vertebrates. A principal constituent of the extracellular matrix (ECM), it mediates the growth and metastasis of tumour cells. NMDCO_relaxed.owl CHEBI:16991 biolink:NamedThing deoxyribonucleic acid High molecular weight, linear polymers, composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contain the genetic information of organisms. NMDCO_relaxed.owl CHEBI:17234 biolink:NamedThing glucose An aldohexose used as a source of energy and metabolic intermediate. NMDCO_relaxed.owl CHEBI:17544 biolink:NamedThing hydrogencarbonate The carbon oxoanion resulting from the removal of a proton from carbonic acid. NMDCO_relaxed.owl CHEBI:22315 biolink:NamedThing alkaloid Any of the naturally occurring, basic nitrogen compounds (mostly heterocyclic) occurring mostly in the plant kingdom, but also found in bacteria, fungi, and animals. By extension, certain neutral compounds biogenetically related to basic alkaloids are also classed as alkaloids. Amino acids, peptides, proteins, nucleotides, nucleic acids, amino sugars and antibiotics are not normally regarded as alkaloids. Compounds in which the nitrogen is exocyclic (dopamine, mescaline, serotonin, etc.) are usually classed as amines rather than alkaloids. NMDCO_relaxed.owl CHEBI:24833 biolink:NamedThing oxoacid A compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons). NMDCO_relaxed.owl CHEBI:25555 biolink:NamedThing nitrogen atom NMDCO_relaxed.owl CHEBI:25805 biolink:NamedThing oxygen atom NMDCO_relaxed.owl CHEBI:26708 biolink:NamedThing sodium atom NMDCO_relaxed.owl CHEBI:26764 biolink:NamedThing steroid hormone Any steroid that acts as hormone. NMDCO_relaxed.owl CHEBI:26833 biolink:NamedThing sulfur atom NMDCO_relaxed.owl CHEBI:27594 biolink:NamedThing carbon atom NMDCO_relaxed.owl CHEBI:28087 biolink:NamedThing glycogen A polydisperse, highly branched glucan composed of chains of D-glucopyranose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages. A small number of alpha(1->3) glycosidic linkages and some cumulative alpha(1->6) links also may occur. The branches in glycogen typically contain 8 to 12 glucose residues. NMDCO_relaxed.owl CHEBI:28659 biolink:NamedThing phosphorus atom NMDCO_relaxed.owl CHEBI:28938 biolink:NamedThing ammonium An onium cation obtained by protonation of ammonia. NMDCO_relaxed.owl CHEBI:29101 biolink:NamedThing sodium(1+) A monoatomic monocation obtained from sodium. NMDCO_relaxed.owl CHEBI:30089 biolink:NamedThing acetate A monocarboxylic acid anion resulting from the removal of a proton from the carboxy group of acetic acid. NMDCO_relaxed.owl CHEBI:350546 biolink:NamedThing serotonin(1+) An ammonium ion that is the conjugate acid of serotonin; major species at pH 7.3. NMDCO_relaxed.owl CHEBI:35780 biolink:NamedThing phosphate ion A phosphorus oxoanion that is the conjugate base of phosphoric acid. NMDCO_relaxed.owl CHEBI:49637 biolink:NamedThing hydrogen atom NMDCO_relaxed.owl CHEBI:50047 biolink:NamedThing organic amino compound A compound formally derived from ammonia by replacing one, two or three hydrogen atoms by organyl groups. NMDCO_relaxed.owl CHEBI:57887 biolink:NamedThing tryptaminium An ammonium ion that is the conjugate acid of tryptamine arising from protonation of the primary amino group; major species at pH 7.3. NMDCO_relaxed.owl CHEBI:57977 biolink:NamedThing bilirubin(2-) A dicarboxylic acid dianion obtained by deprotonation of the two carboxy groups of bilirubin; major species at pH 7.3. NMDCO_relaxed.owl CHEBI:72587 biolink:NamedThing (R)-noradrenaline(1+) An organic cation that is the conjugate acid of (R)-noradrenaline, obtained by protonation of the priamry amino group; major species at pH 7.3. NMDCO_relaxed.owl UBERON:0001062 biolink:NamedThing anatomical entity Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species. NMDCO_relaxed.owl BFO:0000142 biolink:NamedThing one-dimensional continuant fiat boundary NMDCO_relaxed.owl BFO:0000146 biolink:NamedThing two-dimensional continuant fiat boundary NMDCO_relaxed.owl CHEBI:10545 biolink:NamedThing electron Elementary particle not affected by the strong force having a spin 1/2, a negative elementary charge and a rest mass of 0.000548579903(13) u, or 0.51099906(15) MeV. NMDCO_relaxed.owl CHEBI:36338 biolink:NamedThing lepton Lepton is a fermion that does not experience the strong force (strong interaction). The term is derived from the Greek lambdaepsilonpitauomicronsigma (small, thin). NMDCO_relaxed.owl CHEBI:30225 biolink:NamedThing positron NMDCO_relaxed.owl CHEBI:36352 biolink:NamedThing neutrino NMDCO_relaxed.owl CHEBI:131621 biolink:NamedThing C19-steroid NMDCO_relaxed.owl CHEBI:35341 biolink:NamedThing steroid Any of naturally occurring compounds and synthetic analogues, based on the cyclopenta[a]phenanthrene carbon skeleton, partially or completely hydrogenated; there are usually methyl groups at C-10 and C-13, and often an alkyl group at C-17. By extension, one or more bond scissions, ring expansions and/or ring contractions of the skeleton may have occurred. Natural steroids are derived biogenetically from squalene which is a triterpene. NMDCO_relaxed.owl CHEBI:136889 biolink:NamedThing 5beta steroid Any steroid that has beta-configuration at position 5. NMDCO_relaxed.owl CHEBI:35350 biolink:NamedThing hydroxy steroid NMDCO_relaxed.owl CHEBI:35508 biolink:NamedThing steroid fundamental parent NMDCO_relaxed.owl CHEBI:35789 biolink:NamedThing oxo steroid NMDCO_relaxed.owl CHEBI:36078 biolink:NamedThing cholanoid NMDCO_relaxed.owl CHEBI:47891 biolink:NamedThing steroid acid Any steroid substituted by at least one carboxy group. NMDCO_relaxed.owl CHEBI:50402 biolink:NamedThing androstanoid NMDCO_relaxed.owl CHEBI:131927 biolink:NamedThing dicarboxylic acids and O-substituted derivatives A class of carbonyl compound encompassing dicarboxylic acids and any derivatives obtained by substitution of either one or both of the carboxy hydrogens. NMDCO_relaxed.owl CHEBI:36586 biolink:NamedThing carbonyl compound Any compound containing the carbonyl group, C=O. The term is commonly used in the restricted sense of aldehydes and ketones, although it actually includes carboxylic acids and derivatives. NMDCO_relaxed.owl CHEBI:17087 biolink:NamedThing ketone A compound in which a carbonyl group is bonded to two carbon atoms: R2C=O (neither R may be H). NMDCO_relaxed.owl CHEBI:17478 biolink:NamedThing aldehyde NMDCO_relaxed.owl CHEBI:33308 biolink:NamedThing carboxylic ester An ester of a carboxylic acid, R(1)C(=O)OR(2), where R(1) = H or organyl and R(2) = organyl. NMDCO_relaxed.owl CHEBI:33575 biolink:NamedThing carboxylic acid A carbon oxoacid acid carrying at least one -C(=O)OH group and having the structure RC(=O)OH, where R is any any monovalent functional group. Carboxylic acids are the most common type of organic acid. NMDCO_relaxed.owl CHEBI:132153 biolink:NamedThing hyaluronate A carbohydrate acid derivative anion obtained by deprotonation of the carboxy groups of hyaluronic acid; major species at pH 7.3. NMDCO_relaxed.owl CHEBI:61469 biolink:NamedThing polyanionic polymer A polymer, composed of polyanion macromolecules. NMDCO_relaxed.owl CHEBI:63551 biolink:NamedThing carbohydrate acid derivative anion A carboxylic acid anion resulting from the deprotonation of the carboxy group of a carbohydrate acid derivative. NMDCO_relaxed.owl CHEBI:133331 biolink:NamedThing metal oxide NMDCO_relaxed.owl CHEBI:24836 biolink:NamedThing inorganic oxide NMDCO_relaxed.owl CHEBI:24837 biolink:NamedThing inorganic peroxide NMDCO_relaxed.owl CHEBI:33327 biolink:NamedThing silicon oxide NMDCO_relaxed.owl CHEBI:35196 biolink:NamedThing nitrogen oxide NMDCO_relaxed.owl CHEBI:48154 biolink:NamedThing sulfur oxide NMDCO_relaxed.owl CHEBI:13389 biolink:NamedThing NAD NMDCO_relaxed.owl CHEBI:25524 biolink:NamedThing NAD(P) NMDCO_relaxed.owl CHEBI:13392 biolink:NamedThing NAD(P)H NMDCO_relaxed.owl CHEBI:25523 biolink:NamedThing NADP NMDCO_relaxed.owl CHEBI:134024 biolink:NamedThing chlorofluorocarbon NMDCO_relaxed.owl CHEBI:134179 biolink:NamedThing volatile organic compound NMDCO_relaxed.owl CHEBI:16236 biolink:NamedThing ethanol NMDCO_relaxed.owl CHEBI:16716 biolink:NamedThing benzene NMDCO_relaxed.owl CHEBI:17578 biolink:NamedThing toluene NMDCO_relaxed.owl CHEBI:17790 biolink:NamedThing methanol NMDCO_relaxed.owl CHEBI:27338 biolink:NamedThing xylene NMDCO_relaxed.owl CHEBI:43098 biolink:NamedThing heptane NMDCO_relaxed.owl CHEBI:47032 biolink:NamedThing 1,4-dioxane NMDCO_relaxed.owl CHEBI:36683 biolink:NamedThing organochlorine compound NMDCO_relaxed.owl CHEBI:39285 biolink:NamedThing chloropicrin NMDCO_relaxed.owl CHEBI:37143 biolink:NamedThing organofluorine compound NMDCO_relaxed.owl CHEBI:72695 biolink:NamedThing organic molecule Any molecule that consists of at least one carbon atom as part of the electrically neutral entity. NMDCO_relaxed.owl CHEBI:25701 biolink:NamedThing organic oxide NMDCO_relaxed.owl CHEBI:33832 biolink:NamedThing organic cyclic compound Any organic molecule that consists of atoms connected in the form of a ring. NMDCO_relaxed.owl CHEBI:35716 biolink:NamedThing C-nitro compound NMDCO_relaxed.owl CHEBI:36587 biolink:NamedThing organic oxo compound Organic compounds containing an oxygen atom, =O, doubly bonded to carbon or another element. NMDCO_relaxed.owl CHEBI:51151 biolink:NamedThing dipolar compound An organic molecule that is electrically neutral carrying a positive and a negative charge in one of its major canonical descriptions. In most dipolar compounds the charges are delocalized; however the term is also applied to species where this is not the case. NMDCO_relaxed.owl CHEBI:134438 biolink:NamedThing titanium oxides NMDCO_relaxed.owl CHEBI:37217 biolink:NamedThing titanium molecular entity NMDCO_relaxed.owl CHEBI:13643 biolink:NamedThing glycol NMDCO_relaxed.owl CHEBI:23824 biolink:NamedThing diol NMDCO_relaxed.owl CHEBI:136861 biolink:NamedThing pyrrolopurine NMDCO_relaxed.owl CHEBI:26979 biolink:NamedThing organic heterotricyclic compound NMDCO_relaxed.owl CHEBI:38101 biolink:NamedThing organonitrogen heterocyclic compound Any organonitrogen compound containing a cyclic component with nitrogen and at least one other element as ring member atoms. NMDCO_relaxed.owl CHEBI:18282 biolink:NamedThing nucleobase That part of DNA or RNA that may be involved in pairing. NMDCO_relaxed.owl CHEBI:22728 biolink:NamedThing benzopyrrole NMDCO_relaxed.owl CHEBI:26421 biolink:NamedThing pyridines NMDCO_relaxed.owl CHEBI:35875 biolink:NamedThing imidazopyrimidine NMDCO_relaxed.owl CHEBI:38077 biolink:NamedThing polypyrrole A compound composed of two or more pyrrole units. NMDCO_relaxed.owl CHEBI:38295 biolink:NamedThing azabicycloalkane NMDCO_relaxed.owl CHEBI:38669 biolink:NamedThing pyrazolopyrimidine NMDCO_relaxed.owl CHEBI:137980 biolink:NamedThing metalloid atom NMDCO_relaxed.owl CHEBI:33250 biolink:NamedThing atom A chemical entity constituting the smallest component of an element having the chemical properties of the element. NMDCO_relaxed.owl CHEBI:25585 biolink:NamedThing nonmetal atom NMDCO_relaxed.owl CHEBI:33318 biolink:NamedThing main group element atom An atom belonging to one of the main groups (found in the s- and p- blocks) of the periodic table. NMDCO_relaxed.owl CHEBI:33521 biolink:NamedThing metal atom An atom of an element that exhibits typical metallic properties, being typically shiny, with high electrical and thermal conductivity. NMDCO_relaxed.owl CHEBI:33559 biolink:NamedThing s-block element atom NMDCO_relaxed.owl CHEBI:138103 biolink:NamedThing inorganic acid A Bronsted acid derived from one or more inorganic compounds. Inorganic acids (also known as mineral acids) form hydrons and conjugate base ions when dissolved in water. NMDCO_relaxed.owl CHEBI:39141 biolink:NamedThing Bronsted acid A molecular entity capable of donating a hydron to an acceptor (Bronsted base). NMDCO_relaxed.owl CHEBI:48356 biolink:NamedThing protic solvent A polar solvent that is capable of acting as a hydron (proton) donor. NMDCO_relaxed.owl CHEBI:138366 biolink:NamedThing bile acids Any member of a group of hydroxy steroids occuring in bile, where they are present as the sodium salts of their amides with glycine or taurine. In mammals bile acids almost invariably have 5beta-configuration, while in lower vertebrates, some bile acids, known as allo-bile acids, have 5alpha-configuration. NMDCO_relaxed.owl CHEBI:25384 biolink:NamedThing monocarboxylic acid An oxoacid containing a single carboxy group. NMDCO_relaxed.owl CHEBI:15366 biolink:NamedThing acetic acid A simple monocarboxylic acid containing two carbons. NMDCO_relaxed.owl CHEBI:30751 biolink:NamedThing formic acid NMDCO_relaxed.owl CHEBI:35366 biolink:NamedThing fatty acid NMDCO_relaxed.owl CHEBI:36838 biolink:NamedThing 17-hydroxy steroid NMDCO_relaxed.owl CHEBI:22868 biolink:NamedThing bile salt A sodium salt of the conjugate of any bile acid with either glycine or taurine. NMDCO_relaxed.owl CHEBI:36277 biolink:NamedThing bile acid salt A salt of a bile acid. NMDCO_relaxed.owl CHEBI:36278 biolink:NamedThing cholanic acids NMDCO_relaxed.owl CHEBI:138675 biolink:NamedThing gas molecular entity Any main group molecular entity that is gaseous at standard temperature and pressure (STP; 0degreeC and 100 kPa). NMDCO_relaxed.owl CHEBI:33579 biolink:NamedThing main group molecular entity A molecular entity containing one or more atoms from any of groups 1, 2, 13, 14, 15, 16, 17, and 18 of the periodic table. NMDCO_relaxed.owl CHEBI:33583 biolink:NamedThing noble gas molecular entity NMDCO_relaxed.owl CHEBI:33674 biolink:NamedThing s-block molecular entity An s-block molecular entity is a molecular entity containing one or more atoms of an s-block element. NMDCO_relaxed.owl CHEBI:33675 biolink:NamedThing p-block molecular entity A main group molecular entity that contains one or more atoms of a p-block element. NMDCO_relaxed.owl CHEBI:36562 biolink:NamedThing main-group coordination entity NMDCO_relaxed.owl CHEBI:139120 biolink:NamedThing carotenoid beta-end derivative NMDCO_relaxed.owl CHEBI:23044 biolink:NamedThing carotenoid NMDCO_relaxed.owl CHEBI:27325 biolink:NamedThing xanthophyll NMDCO_relaxed.owl CHEBI:139291 biolink:NamedThing chlorophyll(1-) NMDCO_relaxed.owl CHEBI:58941 biolink:NamedThing cyclic tetrapyrrole anion NMDCO_relaxed.owl CHEBI:139292 biolink:NamedThing chlorophyllide(2-) NMDCO_relaxed.owl CHEBI:35757 biolink:NamedThing monocarboxylic acid anion A carboxylic acid anion formed when the carboxy group of a monocarboxylic acid is deprotonated. NMDCO_relaxed.owl CHEBI:16454 biolink:NamedThing pantothenate NMDCO_relaxed.owl CHEBI:22718 biolink:NamedThing benzoates NMDCO_relaxed.owl CHEBI:28868 biolink:NamedThing fatty acid anion NMDCO_relaxed.owl CHEBI:36059 biolink:NamedThing hydroxy monocarboxylic acid anion NMDCO_relaxed.owl CHEBI:36125 biolink:NamedThing cyclitol carboxylic acid anion NMDCO_relaxed.owl CHEBI:36235 biolink:NamedThing bile acid anion NMDCO_relaxed.owl CHEBI:38773 biolink:NamedThing quinolinemonocarboxylate NMDCO_relaxed.owl CHEBI:13941 biolink:NamedThing carbamate NMDCO_relaxed.owl CHEBI:37022 biolink:NamedThing amino-acid anion NMDCO_relaxed.owl CHEBI:33558 biolink:NamedThing alpha-amino-acid anion An amino-acid anion obtained by deprotonation of any alpha-amino acid. NMDCO_relaxed.owl CHEBI:63471 biolink:NamedThing branched-chain amino-acid anion NMDCO_relaxed.owl CHEBI:140503 biolink:NamedThing kaolin NMDCO_relaxed.owl CHEBI:48730 biolink:NamedThing aluminosilicate mineral NMDCO_relaxed.owl CHEBI:60004 biolink:NamedThing mixture A mixture is a chemical substance composed of multiple molecules, at least two of which are of a different kind. NMDCO_relaxed.owl CHEBI:166975 biolink:NamedThing soybean oil NMDCO_relaxed.owl CHEBI:60027 biolink:NamedThing polymer A polymer is a mixture, which is composed of macromolecules of different kinds and which may be differentiated by composition, length, degree of branching etc.. NMDCO_relaxed.owl CHEBI:24433 biolink:NamedThing group A defined linked collection of atoms or a single atom within a molecular entity. NMDCO_relaxed.owl CHEBI:33246 biolink:NamedThing inorganic group Any substituent group which does not contain carbon. NMDCO_relaxed.owl CHEBI:33247 biolink:NamedThing organic group Any substituent group or skeleton containing carbon. NMDCO_relaxed.owl CHEBI:143004 biolink:NamedThing ultra-long-chain fatty acid NMDCO_relaxed.owl CHEBI:27283 biolink:NamedThing very long-chain fatty acid NMDCO_relaxed.owl CHEBI:143005 biolink:NamedThing ultra-long-chain fatty acid anion NMDCO_relaxed.owl CHEBI:58950 biolink:NamedThing very long-chain fatty acid anion NMDCO_relaxed.owl CHEBI:143901 biolink:NamedThing manganese dihydroxide NMDCO_relaxed.owl CHEBI:143907 biolink:NamedThing manganese hydroxide NMDCO_relaxed.owl CHEBI:25154 biolink:NamedThing manganese molecular entity NMDCO_relaxed.owl CHEBI:15022 biolink:NamedThing electron donor NMDCO_relaxed.owl CHEBI:17891 biolink:NamedThing donor A molecular entity that can transfer ("donate") an electron, a pair of electrons, an atom or a group to another molecular entity. NMDCO_relaxed.owl CHEBI:39144 biolink:NamedThing Lewis base A molecular entity able to provide a pair of electrons and thus capable of forming a covalent bond with an electron-pair acceptor (Lewis acid), thereby producing a Lewis adduct. NMDCO_relaxed.owl CHEBI:15339 biolink:NamedThing acceptor A molecular entity that can accept an electron, a pair of electrons, an atom or a group from another molecular entity. NMDCO_relaxed.owl CHEBI:22586 biolink:NamedThing antioxidant A substance that opposes oxidation or inhibits reactions brought about by dioxygen or peroxides. NMDCO_relaxed.owl CHEBI:22695 biolink:NamedThing base A molecular entity having an available pair of electrons capable of forming a covalent bond with a hydron (Bronsted base) or with the vacant orbital of some other molecular entity (Lewis base). NMDCO_relaxed.owl CHEBI:35223 biolink:NamedThing catalyst A substance that increases the rate of a reaction without modifying the overall standard Gibbs energy change in the reaction. NMDCO_relaxed.owl CHEBI:37527 biolink:NamedThing acid An acid is a molecular entity capable of donating a hydron (Bronsted acid) or capable of forming a covalent bond with an electron pair (Lewis acid). NMDCO_relaxed.owl CHEBI:46787 biolink:NamedThing solvent A liquid that can dissolve other substances (solutes) without any change in their chemical composition. NMDCO_relaxed.owl CHEBI:52214 biolink:NamedThing ligand NMDCO_relaxed.owl CHEBI:63046 biolink:NamedThing emulsifier NMDCO_relaxed.owl CHEBI:63248 biolink:NamedThing oxidising agent A substance that removes electrons from another reactant in a redox reaction. NMDCO_relaxed.owl CHEBI:76413 biolink:NamedThing greenhouse gas NMDCO_relaxed.owl CHEBI:78298 biolink:NamedThing environmental contaminant NMDCO_relaxed.owl CHEBI:35287 biolink:NamedThing acylcholine A choline ester formed from choline and a carboxylic acid. NMDCO_relaxed.owl CHEBI:47622 biolink:NamedThing acetate ester Any carboxylic ester where the carboxylic acid component is acetic acid. NMDCO_relaxed.owl CHEBI:5186 biolink:NamedThing fucoxanthin NMDCO_relaxed.owl CHEBI:15368 biolink:NamedThing acrolein NMDCO_relaxed.owl CHEBI:51688 biolink:NamedThing enal NMDCO_relaxed.owl CHEBI:15377 biolink:NamedThing water NMDCO_relaxed.owl CHEBI:33693 biolink:NamedThing oxygen hydride NMDCO_relaxed.owl CHEBI:16234 biolink:NamedThing hydroxide NMDCO_relaxed.owl CHEBI:29412 biolink:NamedThing oxonium NMDCO_relaxed.owl CHEBI:29793 biolink:NamedThing hydridodioxygen(1+) NMDCO_relaxed.owl CHEBI:37176 biolink:NamedThing mononuclear parent hydride NMDCO_relaxed.owl CHEBI:16136 biolink:NamedThing hydrogen sulfide NMDCO_relaxed.owl CHEBI:16183 biolink:NamedThing methane NMDCO_relaxed.owl CHEBI:17883 biolink:NamedThing hydrogen chloride NMDCO_relaxed.owl CHEBI:29228 biolink:NamedThing hydrogen fluoride NMDCO_relaxed.owl CHEBI:52625 biolink:NamedThing inorganic hydroxy compound NMDCO_relaxed.owl CHEBI:15378 biolink:NamedThing hydron NMDCO_relaxed.owl CHEBI:25414 biolink:NamedThing monoatomic monocation NMDCO_relaxed.owl CHEBI:33251 biolink:NamedThing monoatomic hydrogen NMDCO_relaxed.owl CHEBI:33252 biolink:NamedThing atomic nucleus A nucleus is the positively charged central portion of an atom, excluding the orbital electrons. NMDCO_relaxed.owl CHEBI:30216 biolink:NamedThing alpha-particle NMDCO_relaxed.owl CHEBI:60242 biolink:NamedThing monovalent inorganic cation An atom or small molecule with a positive charge that does not contain carbon in covalent linkage, with a valency of one. NMDCO_relaxed.owl CHEBI:16526 biolink:NamedThing carbon dioxide NMDCO_relaxed.owl CHEBI:17045 biolink:NamedThing dinitrogen oxide NMDCO_relaxed.owl CHEBI:17245 biolink:NamedThing carbon monoxide NMDCO_relaxed.owl CHEBI:17997 biolink:NamedThing dinitrogen NMDCO_relaxed.owl CHEBI:18276 biolink:NamedThing dihydrogen NMDCO_relaxed.owl CHEBI:25812 biolink:NamedThing ozone NMDCO_relaxed.owl CHEBI:33309 biolink:NamedThing noble gas atom NMDCO_relaxed.owl CHEBI:25362 biolink:NamedThing elemental molecule A molecule all atoms of which have the same atomic number. NMDCO_relaxed.owl CHEBI:33263 biolink:NamedThing diatomic oxygen NMDCO_relaxed.owl CHEBI:15422 biolink:NamedThing ATP NMDCO_relaxed.owl CHEBI:37045 biolink:NamedThing purine ribonucleoside 5'-triphosphate NMDCO_relaxed.owl CHEBI:15996 biolink:NamedThing GTP NMDCO_relaxed.owl CHEBI:37096 biolink:NamedThing adenosine 5'-phosphate NMDCO_relaxed.owl CHEBI:155827 biolink:NamedThing argon-39 atom NMDCO_relaxed.owl CHEBI:49475 biolink:NamedThing argon atom NMDCO_relaxed.owl CHEBI:155903 biolink:NamedThing copper(II) phthalocyanine NMDCO_relaxed.owl CHEBI:155908 biolink:NamedThing copper tetrapyrrole NMDCO_relaxed.owl CHEBI:51585 biolink:NamedThing metallophthalocyanine NMDCO_relaxed.owl CHEBI:33909 biolink:NamedThing metallotetrapyrrole NMDCO_relaxed.owl CHEBI:25216 biolink:NamedThing metalloporphyrin NMDCO_relaxed.owl CHEBI:38251 biolink:NamedThing magnesium tetrapyrrole NMDCO_relaxed.owl CHEBI:51584 biolink:NamedThing metallophthalocyanines NMDCO_relaxed.owl CHEBI:37403 biolink:NamedThing copper coordination entity NMDCO_relaxed.owl CHEBI:15611 biolink:NamedThing sarcosine NMDCO_relaxed.owl CHEBI:21760 biolink:NamedThing N-methyl-amino acid NMDCO_relaxed.owl CHEBI:21766 biolink:NamedThing N-methylglycines NMDCO_relaxed.owl CHEBI:15693 biolink:NamedThing aldose Aldehydic parent sugars (polyhydroxy aldehydes H[CH(OH)]nC(=O)H, n >= 2) and their intramolecular hemiacetals. NMDCO_relaxed.owl CHEBI:35381 biolink:NamedThing monosaccharide Parent monosaccharides are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H-[CHOH]n-C(=O)[CHOH]m-H with three or more carbon atoms. The generic term 'monosaccharide' (as opposed to oligosaccharide or polysaccharide) denotes a single unit, without glycosidic connection to other such units. It includes aldoses, dialdoses, aldoketoses, ketoses and diketoses, as well as deoxy sugars, provided that the parent compound has a (potential) carbonyl group. NMDCO_relaxed.owl CHEBI:18133 biolink:NamedThing hexose Any six-carbon monosaccharide which in its linear form contains either an aldehyde group at position 1 (aldohexose) or a ketone group at position 2 (ketohexose). NMDCO_relaxed.owl CHEBI:15734 biolink:NamedThing primary alcohol NMDCO_relaxed.owl CHEBI:30879 biolink:NamedThing alcohol NMDCO_relaxed.owl CHEBI:2571 biolink:NamedThing aliphatic alcohol NMDCO_relaxed.owl CHEBI:26878 biolink:NamedThing tertiary alcohol NMDCO_relaxed.owl CHEBI:35681 biolink:NamedThing secondary alcohol NMDCO_relaxed.owl CHEBI:63732 biolink:NamedThing 1,1-diol NMDCO_relaxed.owl CHEBI:15841 biolink:NamedThing polypeptide A peptide containing ten or more amino acid residues. NMDCO_relaxed.owl CHEBI:16670 biolink:NamedThing peptide Amide derived from two or more amino carboxylic acid molecules (the same or different) by formation of a covalent bond from the carbonyl carbon of one to the nitrogen atom of another with formal loss of water. The term is usually applied to structures formed from alpha-amino acids, but it includes those derived from any amino carboxylic acid. X = OH, OR, NH2, NHR, etc. NMDCO_relaxed.owl CHEBI:23449 biolink:NamedThing cyclic peptide NMDCO_relaxed.owl CHEBI:25905 biolink:NamedThing peptide hormone Any peptide with hormonal activity in animals, whether endocrine, neuroendocrine, or paracrine. NMDCO_relaxed.owl CHEBI:33839 biolink:NamedThing macromolecule A macromolecule is a molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. NMDCO_relaxed.owl CHEBI:26178 biolink:NamedThing polyester macromolecule NMDCO_relaxed.owl CHEBI:33694 biolink:NamedThing biomacromolecule A macromolecule formed by a living organism. NMDCO_relaxed.owl CHEBI:37997 biolink:NamedThing homopolymer macromolecule NMDCO_relaxed.owl CHEBI:53310 biolink:NamedThing copolymer macromolecule NMDCO_relaxed.owl CHEBI:53368 biolink:NamedThing ionic macromolecule A macromolecule containing ionic groups. NMDCO_relaxed.owl CHEBI:15986 biolink:NamedThing polynucleotide A nucleobase-containing molecular entity with a polymeric structure comprised of a linear sequence of 13 or more nucleotide residues. NMDCO_relaxed.owl CHEBI:33695 biolink:NamedThing information biomacromolecule NMDCO_relaxed.owl CHEBI:36080 biolink:NamedThing protein A biological macromolecule minimally consisting of one polypeptide chain synthesized at the ribosome. NMDCO_relaxed.owl CHEBI:61120 biolink:NamedThing nucleobase-containing molecular entity Any compound that has a nucleobase as a part. NMDCO_relaxed.owl CHEBI:25608 biolink:NamedThing nucleoside phosphate NMDCO_relaxed.owl CHEBI:37121 biolink:NamedThing guanosine 5'-phosphate NMDCO_relaxed.owl CHEBI:16042 biolink:NamedThing halide anion NMDCO_relaxed.owl CHEBI:33429 biolink:NamedThing monoatomic monoanion NMDCO_relaxed.owl CHEBI:79389 biolink:NamedThing monovalent inorganic anion Any inorganic anion with a valency of one. NMDCO_relaxed.owl CHEBI:16301 biolink:NamedThing nitrite NMDCO_relaxed.owl CHEBI:17632 biolink:NamedThing nitrate NMDCO_relaxed.owl CHEBI:29337 biolink:NamedThing azanide NMDCO_relaxed.owl CHEBI:39745 biolink:NamedThing dihydrogenphosphate A monovalent inorganic anion that consists of phosphoric acid in which one of the three OH groups has been deprotonated. NMDCO_relaxed.owl CHEBI:35107 biolink:NamedThing azane Saturated acyclic nitrogen hydrides having the general formula NnHn+2. NMDCO_relaxed.owl CHEBI:33405 biolink:NamedThing hydracid NMDCO_relaxed.owl CHEBI:18140 biolink:NamedThing hydrogen halide NMDCO_relaxed.owl CHEBI:18407 biolink:NamedThing hydrogen cyanide NMDCO_relaxed.owl CHEBI:33535 biolink:NamedThing sulfur hydride NMDCO_relaxed.owl CHEBI:29919 biolink:NamedThing hydrosulfide NMDCO_relaxed.owl CHEBI:18310 biolink:NamedThing alkane NMDCO_relaxed.owl CHEBI:64708 biolink:NamedThing one-carbon compound An organic molecular entity containing a single carbon atom (C1). NMDCO_relaxed.owl CHEBI:16199 biolink:NamedThing urea NMDCO_relaxed.owl CHEBI:16842 biolink:NamedThing formaldehyde NMDCO_relaxed.owl CHEBI:27376 biolink:NamedThing methanesulfonic acid NMDCO_relaxed.owl CHEBI:28616 biolink:NamedThing carbamic acid A one-carbon compound that is ammonia in which one of the hydrogens is replaced by a carboxy group. Although carbamic acid derivatives are common, carbamic acid itself has never been synthesised. NMDCO_relaxed.owl CHEBI:3311 biolink:NamedThing calcium carbonate NMDCO_relaxed.owl CHEBI:33482 biolink:NamedThing sulfur oxoanion NMDCO_relaxed.owl CHEBI:45696 biolink:NamedThing hydrogensulfate NMDCO_relaxed.owl CHEBI:58958 biolink:NamedThing organosulfate oxoanion An organic anion of general formula RS(=O)2O(-) where R is an organyl group. NMDCO_relaxed.owl CHEBI:18422 biolink:NamedThing sulfur dioxide NMDCO_relaxed.owl CHEBI:79388 biolink:NamedThing divalent inorganic anion Any inorganic anion with a valency of two. NMDCO_relaxed.owl CHEBI:29340 biolink:NamedThing hydridonitrate(2-) A divalent inorganic anion resulting from the removal of two protons from ammonia. NMDCO_relaxed.owl CHEBI:35404 biolink:NamedThing chromate(2-) NMDCO_relaxed.owl CHEBI:43474 biolink:NamedThing hydrogenphosphate A phosphate ion that is the conjugate base of dihydrogenphosphate. NMDCO_relaxed.owl CHEBI:29347 biolink:NamedThing monocarboxylic acid amide NMDCO_relaxed.owl CHEBI:27856 biolink:NamedThing acetamide NMDCO_relaxed.owl CHEBI:23982 biolink:NamedThing ethanols NMDCO_relaxed.owl CHEBI:50584 biolink:NamedThing alkyl alcohol NMDCO_relaxed.owl CHEBI:16240 biolink:NamedThing hydrogen peroxide NMDCO_relaxed.owl CHEBI:26523 biolink:NamedThing reactive oxygen species NMDCO_relaxed.owl CHEBI:16261 biolink:NamedThing chitosan NMDCO_relaxed.owl CHEBI:22506 biolink:NamedThing aminoglycan NMDCO_relaxed.owl CHEBI:17029 biolink:NamedThing chitin NMDCO_relaxed.owl CHEBI:18085 biolink:NamedThing glycosaminoglycan Any polysaccharide containing a substantial proportion of aminomonosaccharide residues. NMDCO_relaxed.owl CHEBI:72813 biolink:NamedThing exopolysaccharide A biomacromolecule composed of carbohydrate residues which is secreted by a microorganism into the surrounding environment. NMDCO_relaxed.owl CHEBI:17548 biolink:NamedThing alginic acid NMDCO_relaxed.owl CHEBI:62967 biolink:NamedThing amorphous cellulose NMDCO_relaxed.owl CHEBI:62968 biolink:NamedThing crystalline cellulose NMDCO_relaxed.owl CHEBI:33458 biolink:NamedThing nitrogen oxoanion NMDCO_relaxed.owl CHEBI:62764 biolink:NamedThing reactive nitrogen species NMDCO_relaxed.owl CHEBI:37395 biolink:NamedThing mucopolysaccharide Any of the group of polysaccharides composed of alternating units from uronic acids and glycosamines, and commonly partially esterified with sulfuric acid. NMDCO_relaxed.owl CHEBI:16474 biolink:NamedThing NADPH NMDCO_relaxed.owl CHEBI:16908 biolink:NamedThing NADH NMDCO_relaxed.owl CHEBI:16482 biolink:NamedThing naphthalene NMDCO_relaxed.owl CHEBI:25477 biolink:NamedThing naphthalenes NMDCO_relaxed.owl CHEBI:35426 biolink:NamedThing ortho-fused bicyclic arene NMDCO_relaxed.owl CHEBI:23014 biolink:NamedThing carbon oxide NMDCO_relaxed.owl CHEBI:16541 biolink:NamedThing protein polypeptide chain A naturally occurring polypeptide synthesized at the ribosome. NMDCO_relaxed.owl CHEBI:16646 biolink:NamedThing carbohydrate Any member of the class of organooxygen compounds that is a polyhydroxy-aldehyde or -ketone or a lactol resulting from their intramolecular condensation (monosaccharides); substances derived from these by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom; and polymeric products arising by intermolecular acetal formation between two or more such molecules (disaccharides, polysaccharides and oligosaccharides). Carbohydrates contain only carbon, hydrogen and oxygen atoms; prior to any oxidation or reduction, most have the empirical formula Cm(H2O)n. Compounds obtained from carbohydrates by substitution, etc., are known as carbohydrate derivatives and may contain other elements. Cyclitols are generally not regarded as carbohydrates. NMDCO_relaxed.owl CHEBI:78616 biolink:NamedThing carbohydrates and carbohydrate derivatives Any organooxygen compound that is a polyhydroxy-aldehyde or -ketone, or a compound derived from one. Carbohydrates contain only carbon, hydrogen and oxygen and usually have an empirical formula Cm(H2O)n; carbohydrate derivatives may contain other elements by substitution or condensation. NMDCO_relaxed.owl CHEBI:167559 biolink:NamedThing glycan Any oligosaccharide, polysaccharide or their derivatives consisting of monosaccharides or monosaccharide derivatives linked by glycosidic bonds. See also http://www.ontobee.org/ontology/GNO?iri=http://purl.obolibrary.org/obo/GNO_00000001. NMDCO_relaxed.owl CHEBI:63299 biolink:NamedThing carbohydrate derivative Any organooxygen compound derived from a carbohydrate by replacement of one or more hydroxy group(s) by an amino group, a thiol group or similar heteroatomic groups. The term also includes derivatives of these compounds. NMDCO_relaxed.owl CHEBI:37622 biolink:NamedThing carboxamide An amide of a carboxylic acid, having the structure RC(=O)NR2. The term is used as a suffix in systematic name formation to denote the -C(=O)NH2 group including its carbon atom. NMDCO_relaxed.owl CHEBI:22160 biolink:NamedThing acetamides NMDCO_relaxed.owl CHEBI:83628 biolink:NamedThing N-acylammonia NMDCO_relaxed.owl CHEBI:32952 biolink:NamedThing amine A compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups. NMDCO_relaxed.owl CHEBI:33709 biolink:NamedThing amino acid A carboxylic acid containing one or more amino groups. NMDCO_relaxed.owl CHEBI:50994 biolink:NamedThing primary amino compound A compound formally derived from ammonia by replacing one hydrogen atom by an organyl group. NMDCO_relaxed.owl CHEBI:50996 biolink:NamedThing tertiary amino compound NMDCO_relaxed.owl CHEBI:64365 biolink:NamedThing aralkylamino compound An organic amino compound in which an aminoalkyl group is linked to an arene. NMDCO_relaxed.owl PR:000018263 biolink:NamedThing amino acid chain An organic amino compound that consists of amino acid residues (unmodified amino-acid residues and/or modified amino-acid residues) linked by peptide bonds or derivatives of such bonds. NMDCO_relaxed.owl CHEBI:166902 biolink:NamedThing noradrenaline(1+) NMDCO_relaxed.owl CHEBI:25697 biolink:NamedThing organic cation Any organic ion with a net positive charge. NMDCO_relaxed.owl CHEBI:35267 biolink:NamedThing quaternary ammonium ion A derivative of ammonium, NH4(+), in which all four of the hydrogens bonded to nitrogen have been replaced with univalent (usually organyl) groups. NMDCO_relaxed.owl CHEBI:58072 biolink:NamedThing carbon monoxide(1+) NMDCO_relaxed.owl CHEBI:65296 biolink:NamedThing primary ammonium ion An ammonium ion derivative resulting from the protonation of the nitrogen atom of a primary amino compound. Major species at pH 7.3. NMDCO_relaxed.owl CHEBI:35274 biolink:NamedThing ammonium ion derivative A derivative of ammonium, NH4(+), in which one (or more) of the hydrogens bonded to the nitrogen have been replaced with univalent organyl groups. The substituting carbon of the organyl group must not itself be directly attached to a heteroatom (thereby excluding protonated amides, hemiaminals, etc). NMDCO_relaxed.owl CHEBI:16701 biolink:NamedThing nucleoside 5'-phosphate NMDCO_relaxed.owl CHEBI:29075 biolink:NamedThing mononucleotide NMDCO_relaxed.owl CHEBI:22712 biolink:NamedThing benzenes NMDCO_relaxed.owl CHEBI:27024 biolink:NamedThing toluenes NMDCO_relaxed.owl CHEBI:38976 biolink:NamedThing alkylbenzene NMDCO_relaxed.owl CHEBI:48109 biolink:NamedThing nitrobenzenes NMDCO_relaxed.owl CHEBI:33842 biolink:NamedThing aromatic annulene NMDCO_relaxed.owl CHEBI:167164 biolink:NamedThing mineral nutrient NMDCO_relaxed.owl CHEBI:46662 biolink:NamedThing mineral In general, a mineral is a chemical substance that is normally crystalline formed and has been formed as a result of geological processes. The term also includes metamict substances (naturally occurring, formerly crystalline substances whose crystallinity has been destroyed by ionising radiation) and can include naturally occurring amorphous substances that have never been crystalline ('mineraloids') such as georgite and calciouranoite as well as substances formed by the action of geological processes on bigenic compounds ('biogenic minerals'). NMDCO_relaxed.owl CHEBI:46663 biolink:NamedThing silicate mineral NMDCO_relaxed.owl CHEBI:46717 biolink:NamedThing sulfide mineral NMDCO_relaxed.owl CHEBI:82661 biolink:NamedThing diatomaceous earth NMDCO_relaxed.owl CHEBI:167564 biolink:NamedThing paralytic shellfish toxin NMDCO_relaxed.owl CHEBI:37332 biolink:NamedThing tropane alkaloid NMDCO_relaxed.owl CHEBI:38958 biolink:NamedThing indole alkaloid An alkaloid containing an indole skeleton. NMDCO_relaxed.owl CHEBI:24436 biolink:NamedThing guanidines NMDCO_relaxed.owl CHEBI:63734 biolink:NamedThing ketone hydrate NMDCO_relaxed.owl CHEBI:16765 biolink:NamedThing tryptamine An aminoalkylindole consisting of indole having a 2-aminoethyl group at the 3-position. NMDCO_relaxed.owl CHEBI:27162 biolink:NamedThing tryptamines Tryptamine and its substitution derivatives. NMDCO_relaxed.owl CHEBI:28790 biolink:NamedThing serotonin A primary amino compound that is the 5-hydroxy derivative of tryptamine. NMDCO_relaxed.owl CHEBI:38631 biolink:NamedThing aminoalkylindole NMDCO_relaxed.owl CHEBI:63534 biolink:NamedThing monoamine An aralylamino compound which contains one amino group connected to an aromatic ring by a two-carbon chain. Monoamines are derived from aromatic amino acids like phenylalanine, tyrosine, tryptophan, and the thyroid hormones by the action of aromatic amino acid decarboxylase enzymes. NMDCO_relaxed.owl CHEBI:51718 biolink:NamedThing alpha,beta-unsaturated aldehyde NMDCO_relaxed.owl CHEBI:16900 biolink:NamedThing chlorophyllide a NMDCO_relaxed.owl CHEBI:25248 biolink:NamedThing methyl ester NMDCO_relaxed.owl CHEBI:18230 biolink:NamedThing chlorophyll a NMDCO_relaxed.owl CHEBI:30033 biolink:NamedThing bacteriochlorophyll a NMDCO_relaxed.owl CHEBI:73113 biolink:NamedThing divinyl chlorophyll a NMDCO_relaxed.owl CHEBI:73115 biolink:NamedThing divinyl chlorophyll b NMDCO_relaxed.owl CHEBI:36244 biolink:NamedThing dicarboxylic acid monoester NMDCO_relaxed.owl CHEBI:38206 biolink:NamedThing chlorophyllide NMDCO_relaxed.owl CHEBI:16966 biolink:NamedThing heteroglycan NMDCO_relaxed.owl CHEBI:18154 biolink:NamedThing polysaccharide A biomacromolecule consisting of large numbers of monosaccharide residues linked glycosidically. This term is commonly used only for those containing more than ten monosaccharide residues. NMDCO_relaxed.owl CHEBI:37164 biolink:NamedThing homopolysaccharide Glycans composed of a single type of monosaccharide residue. They are named by replacing the ending '-ose' of the sugar by '-an'. NMDCO_relaxed.owl CHEBI:16990 biolink:NamedThing bilirubin IXalpha A member of the class of biladienes that is a linear tetrapyrrole with the dipyrrole units being of both exovinyl and endovinyl type. A product of heme degradation, it is produced in the reticuloendothelial system by the reduction of biliverdin and transported to the liver as a complex with serum albumin. NMDCO_relaxed.owl CHEBI:35692 biolink:NamedThing dicarboxylic acid Any carboxylic acid containing two carboxy groups. NMDCO_relaxed.owl CHEBI:36735 biolink:NamedThing biladienes Compounds based on a biladiene skeleton. NMDCO_relaxed.owl CHEBI:33696 biolink:NamedThing nucleic acid A macromolecule made up of nucleotide units and hydrolysable into certain pyrimidine or purine bases (usually adenine, cytosine, guanine, thymine, uracil), D-ribose or 2-deoxy-D-ribose and phosphoric acid. NMDCO_relaxed.owl CHEBI:33697 biolink:NamedThing ribonucleic acid High molecular weight, linear polymers, composed of nucleotides containing ribose and linked by phosphodiester bonds; RNA is central to the synthesis of proteins. NMDCO_relaxed.owl CHEBI:16997 biolink:NamedThing propane-1,2-diol NMDCO_relaxed.owl CHEBI:26284 biolink:NamedThing propane-1,2-diols NMDCO_relaxed.owl CHEBI:21638 biolink:NamedThing N-acylglucosamine NMDCO_relaxed.owl CHEBI:17051 biolink:NamedThing fluoride NMDCO_relaxed.owl CHEBI:17996 biolink:NamedThing chloride NMDCO_relaxed.owl CHEBI:36895 biolink:NamedThing monoatomic fluorine NMDCO_relaxed.owl CHEBI:17089 biolink:NamedThing glycoprotein A compound in which a carbohydrate component is covalently bound to a protein component. NMDCO_relaxed.owl CHEBI:33837 biolink:NamedThing conjugated protein Conjugated protein is a protein that contains a non-peptide component, usually in stoichiometric proportion. NMDCO_relaxed.owl CHEBI:26816 biolink:NamedThing carbohydrate phosphate NMDCO_relaxed.owl CHEBI:28963 biolink:NamedThing amino sugar NMDCO_relaxed.owl CHEBI:35724 biolink:NamedThing carbohydrate sulfate NMDCO_relaxed.owl CHEBI:63367 biolink:NamedThing monosaccharide derivative NMDCO_relaxed.owl CHEBI:63436 biolink:NamedThing carbohydrate acid derivative A carbohydrate derivative that is formally obtained from a carbohydrate acid. NMDCO_relaxed.owl CHEBI:65212 biolink:NamedThing polysaccharide derivative A carbohydrate derivative that is any derivative of a polysaccharide. NMDCO_relaxed.owl CHEBI:33917 biolink:NamedThing aldohexose A hexose with a (potential) aldehyde group at one end. NMDCO_relaxed.owl CHEBI:17326 biolink:NamedThing nucleoside 5'-triphoshate NMDCO_relaxed.owl CHEBI:36976 biolink:NamedThing nucleotide NMDCO_relaxed.owl CHEBI:17347 biolink:NamedThing testosterone NMDCO_relaxed.owl CHEBI:35343 biolink:NamedThing 17beta-hydroxy steroid NMDCO_relaxed.owl CHEBI:47909 biolink:NamedThing 3-oxo-Delta(4) steroid NMDCO_relaxed.owl CHEBI:35604 biolink:NamedThing carbon oxoanion A negative ion consisting solely of carbon and oxygen atoms, and therefore having the general formula CxOy(n-) for some integers x, y and n. NMDCO_relaxed.owl CHEBI:41609 biolink:NamedThing carbonate NMDCO_relaxed.owl CHEBI:38975 biolink:NamedThing methylbenzene NMDCO_relaxed.owl CHEBI:17579 biolink:NamedThing beta-carotene NMDCO_relaxed.owl CHEBI:28425 biolink:NamedThing alpha-carotene NMDCO_relaxed.owl CHEBI:35163 biolink:NamedThing cyclic carotene NMDCO_relaxed.owl CHEBI:17654 biolink:NamedThing electron acceptor NMDCO_relaxed.owl CHEBI:39142 biolink:NamedThing Bronsted base A molecular entity capable of accepting a hydron from a donor (Bronsted acid). NMDCO_relaxed.owl CHEBI:39143 biolink:NamedThing Lewis acid NMDCO_relaxed.owl CHEBI:17792 biolink:NamedThing organohalogen compound NMDCO_relaxed.owl CHEBI:33285 biolink:NamedThing heteroorganic entity A heteroorganic entity is an organic molecular entity in which carbon atoms or organic groups are bonded directly to one or more heteroatoms. NMDCO_relaxed.owl CHEBI:24532 biolink:NamedThing organic heterocyclic compound A cyclic compound having as ring members atoms of carbon and at least of one other element. NMDCO_relaxed.owl CHEBI:25710 biolink:NamedThing organophosphorus compound NMDCO_relaxed.owl CHEBI:35352 biolink:NamedThing organonitrogen compound Any heteroorganic entity containing at least one carbon-nitrogen bond. NMDCO_relaxed.owl CHEBI:36962 biolink:NamedThing organochalcogen compound An organochalcogen compound is a compound containing at least one carbon-chalcogen bond. NMDCO_relaxed.owl CHEBI:37578 biolink:NamedThing halide NMDCO_relaxed.owl CHEBI:33958 biolink:NamedThing halide salt NMDCO_relaxed.owl CHEBI:23117 biolink:NamedThing chlorine molecular entity NMDCO_relaxed.owl CHEBI:23114 biolink:NamedThing chloride salt NMDCO_relaxed.owl CHEBI:33431 biolink:NamedThing elemental chlorine NMDCO_relaxed.owl CHEBI:17972 biolink:NamedThing ribonucleoside triphosphate NMDCO_relaxed.owl CHEBI:26393 biolink:NamedThing purine nucleoside triphosphate NMDCO_relaxed.owl CHEBI:33432 biolink:NamedThing monoatomic chlorine NMDCO_relaxed.owl CHEBI:33266 biolink:NamedThing diatomic nitrogen NMDCO_relaxed.owl CHEBI:18059 biolink:NamedThing lipid 'Lipids' is a loosely defined term for substances of biological origin that are soluble in nonpolar solvents. They consist of saponifiable lipids, such as glycerides (fats and oils) and phospholipids, as well as nonsaponifiable lipids, principally steroids. NMDCO_relaxed.owl CHEBI:50860 biolink:NamedThing organic molecular entity Any molecular entity that contains carbon. NMDCO_relaxed.owl CHEBI:25699 biolink:NamedThing organic ion NMDCO_relaxed.owl CHEBI:32178 biolink:NamedThing Talc NMDCO_relaxed.owl CHEBI:33245 biolink:NamedThing organic fundamental parent An organic fundamental parent is a structure used as a basis for substitutive names in organic nomenclature, containing, in addition to one or more hydrogen atoms, a single atom of an element, a number of atoms (alike or different) linked together to form an unbranched chain, a monocyclic or polycyclic ring system, or a ring assembly or ring/chain system. NMDCO_relaxed.owl CHEBI:33415 biolink:NamedThing elemental carbon NMDCO_relaxed.owl CHEBI:33653 biolink:NamedThing aliphatic compound NMDCO_relaxed.owl CHEBI:33822 biolink:NamedThing organic hydroxy compound An organic compound having at least one hydroxy group attached to a carbon atom. NMDCO_relaxed.owl CHEBI:64709 biolink:NamedThing organic acid Any organic molecular entity that is acidic and contains carbon in covalent linkage. NMDCO_relaxed.owl CHEBI:78840 biolink:NamedThing olefinic compound NMDCO_relaxed.owl CHEBI:18139 biolink:NamedThing trimethylamine NMDCO_relaxed.owl CHEBI:25274 biolink:NamedThing methylamines NMDCO_relaxed.owl CHEBI:32876 biolink:NamedThing tertiary amine NMDCO_relaxed.owl CHEBI:33720 biolink:NamedThing carbohydrate acid NMDCO_relaxed.owl CHEBI:28966 biolink:NamedThing chlorophyll NMDCO_relaxed.owl CHEBI:27888 biolink:NamedThing chlorophyll b NMDCO_relaxed.owl CHEBI:38201 biolink:NamedThing bacteriochlorophyll NMDCO_relaxed.owl CHEBI:18246 biolink:NamedThing (1->4)-beta-D-glucan NMDCO_relaxed.owl CHEBI:28793 biolink:NamedThing beta-D-glucan NMDCO_relaxed.owl CHEBI:53448 biolink:NamedThing methyl cellulose NMDCO_relaxed.owl CHEBI:18248 biolink:NamedThing iron atom An iron group element atom that has atomic number 26. NMDCO_relaxed.owl CHEBI:33356 biolink:NamedThing iron group element atom NMDCO_relaxed.owl CHEBI:33260 biolink:NamedThing elemental hydrogen NMDCO_relaxed.owl CHEBI:18291 biolink:NamedThing manganese atom NMDCO_relaxed.owl CHEBI:33352 biolink:NamedThing manganese group element atom NMDCO_relaxed.owl CHEBI:24632 biolink:NamedThing hydrocarbon NMDCO_relaxed.owl CHEBI:33641 biolink:NamedThing olefin NMDCO_relaxed.owl CHEBI:33663 biolink:NamedThing cyclic hydrocarbon NMDCO_relaxed.owl CHEBI:35186 biolink:NamedThing terpene NMDCO_relaxed.owl CHEBI:18357 biolink:NamedThing (R)-noradrenaline The R-enantiomer of noradrenaline. NMDCO_relaxed.owl CHEBI:33569 biolink:NamedThing noradrenaline A catecholamine in which C-1 of the aminoethyl side-chain is hydroxy-substituted. NMDCO_relaxed.owl CHEBI:33571 biolink:NamedThing (S)-noradrenaline The S-enantiomer of noradrenaline. NMDCO_relaxed.owl CHEBI:18367 biolink:NamedThing phosphate(3-) A phosphate ion that is the conjugate base of hydrogenphosphate. NMDCO_relaxed.owl CHEBI:79387 biolink:NamedThing trivalent inorganic anion Any inorganic anion with a valency of three. NMDCO_relaxed.owl CHEBI:190295 biolink:NamedThing inorganic calcium salt NMDCO_relaxed.owl CHEBI:24839 biolink:NamedThing inorganic salt NMDCO_relaxed.owl CHEBI:24840 biolink:NamedThing inorganic sulfate salt NMDCO_relaxed.owl CHEBI:36093 biolink:NamedThing inorganic chloride NMDCO_relaxed.owl CHEBI:38702 biolink:NamedThing inorganic sodium salt NMDCO_relaxed.owl CHEBI:51084 biolink:NamedThing inorganic nitrate salt NMDCO_relaxed.owl CHEBI:20664 biolink:NamedThing 5beta-cholane NMDCO_relaxed.owl CHEBI:35519 biolink:NamedThing cholane NMDCO_relaxed.owl CHEBI:21656 biolink:NamedThing N-acyl-hexosamine NMDCO_relaxed.owl CHEBI:24271 biolink:NamedThing glucosamines NMDCO_relaxed.owl CHEBI:24586 biolink:NamedThing hexosamine NMDCO_relaxed.owl CHEBI:83821 biolink:NamedThing amino acid derivative NMDCO_relaxed.owl CHEBI:83811 biolink:NamedThing proteinogenic amino acid derivative NMDCO_relaxed.owl CHEBI:66933 biolink:NamedThing N-alkylglycine NMDCO_relaxed.owl CHEBI:22221 biolink:NamedThing acyl group An organic group formed by removing one or more hydroxy groups from an oxoacid that has the general structure RkE(=O)l(OH)m (l =/= 0). Although the term is almost always applied to organic compounds, with carboxylic acid as the oxoacid, acyl groups can in principle be derived from other types of acids such as sulfonic acids or phosphonic acids. NMDCO_relaxed.owl CHEBI:33708 biolink:NamedThing amino-acid residue When two or more amino acids combine to form a peptide, the elements of water are removed, and what remains of each amino acid is called an amino-acid residue. NMDCO_relaxed.owl CHEBI:50319 biolink:NamedThing nucleotide residue NMDCO_relaxed.owl CHEBI:50320 biolink:NamedThing nucleoside residue NMDCO_relaxed.owl CHEBI:51446 biolink:NamedThing organic divalent group NMDCO_relaxed.owl CHEBI:51447 biolink:NamedThing organic univalent group NMDCO_relaxed.owl CHEBI:52845 biolink:NamedThing cyclic organic group An organic group that consists of a closed ring. It may be a substituent or a skeleton. NMDCO_relaxed.owl CHEBI:22256 biolink:NamedThing adenosine phosphate NMDCO_relaxed.owl CHEBI:61296 biolink:NamedThing adenyl ribonucleotide NMDCO_relaxed.owl CHEBI:22313 biolink:NamedThing alkaline earth metal atom NMDCO_relaxed.owl CHEBI:22314 biolink:NamedThing alkali metal atom NMDCO_relaxed.owl CHEBI:33560 biolink:NamedThing p-block element atom Any main group element atom belonging to the p-block of the periodic table. NMDCO_relaxed.owl CHEBI:25016 biolink:NamedThing lead atom NMDCO_relaxed.owl CHEBI:27007 biolink:NamedThing tin atom NMDCO_relaxed.owl CHEBI:27081 biolink:NamedThing transition element atom An element whose atom has an incomplete d sub-shell, or which can give rise to cations with an incomplete d sub-shell. NMDCO_relaxed.owl CHEBI:88184 biolink:NamedThing metal allergen NMDCO_relaxed.owl CHEBI:30217 biolink:NamedThing helium atom NMDCO_relaxed.owl CHEBI:50335 biolink:NamedThing organic nitrogen anion NMDCO_relaxed.owl CHEBI:22323 biolink:NamedThing alkyl group NMDCO_relaxed.owl CHEBI:33248 biolink:NamedThing hydrocarbyl group NMDCO_relaxed.owl CHEBI:22331 biolink:NamedThing alkylamines NMDCO_relaxed.owl CHEBI:22563 biolink:NamedThing anion A monoatomic or polyatomic species having one or more elementary charges of the electron. NMDCO_relaxed.owl CHEBI:24870 biolink:NamedThing ion A molecular entity having a net electric charge. NMDCO_relaxed.owl CHEBI:24867 biolink:NamedThing monoatomic ion NMDCO_relaxed.owl CHEBI:36358 biolink:NamedThing polyatomic ion An ion consisting of more than one atom. NMDCO_relaxed.owl CHEBI:36875 biolink:NamedThing radical ion NMDCO_relaxed.owl CHEBI:36914 biolink:NamedThing inorganic ion NMDCO_relaxed.owl CHEBI:36916 biolink:NamedThing cation A monoatomic or polyatomic species having one or more elementary charges of the proton. NMDCO_relaxed.owl ENVO:06105236 biolink:NamedThing exchangeable ion An ion which is 1) adsorbed onto the surfaces of materials with an opposing charge, 2) are readily displaced by other ions, 3) may be displaced and absorbed by organisms. NMDCO_relaxed.owl CHEBI:22629 biolink:NamedThing arsenate ion NMDCO_relaxed.owl CHEBI:35776 biolink:NamedThing arsenic oxoanion NMDCO_relaxed.owl CHEBI:22632 biolink:NamedThing arsenic molecular entity NMDCO_relaxed.owl CHEBI:33302 biolink:NamedThing pnictogen molecular entity A p-block molecular entity containing any pnictogen. NMDCO_relaxed.owl CHEBI:26082 biolink:NamedThing phosphorus molecular entity NMDCO_relaxed.owl CHEBI:33408 biolink:NamedThing pnictogen oxoacid NMDCO_relaxed.owl CHEBI:33459 biolink:NamedThing pnictogen oxoanion NMDCO_relaxed.owl CHEBI:33465 biolink:NamedThing elemental pnictogen NMDCO_relaxed.owl CHEBI:35881 biolink:NamedThing pnictogen hydride NMDCO_relaxed.owl CHEBI:51143 biolink:NamedThing nitrogen molecular entity NMDCO_relaxed.owl CHEBI:33836 biolink:NamedThing benzenoid aromatic compound NMDCO_relaxed.owl CHEBI:91007 biolink:NamedThing aromatic carboxylate NMDCO_relaxed.owl CHEBI:27171 biolink:NamedThing organic heterobicyclic compound NMDCO_relaxed.owl CHEBI:38180 biolink:NamedThing polycyclic heteroarene NMDCO_relaxed.owl CHEBI:38700 biolink:NamedThing organic sodium salt NMDCO_relaxed.owl CHEBI:22918 biolink:NamedThing branched-chain amino acid NMDCO_relaxed.owl CHEBI:26167 biolink:NamedThing polar amino acid NMDCO_relaxed.owl CHEBI:33704 biolink:NamedThing alpha-amino acid An amino acid in which the amino group is located on the carbon atom at the position alpha to the carboxy group. NMDCO_relaxed.owl CHEBI:83820 biolink:NamedThing non-proteinogenic amino acid NMDCO_relaxed.owl CHEBI:22927 biolink:NamedThing bromine atom NMDCO_relaxed.owl CHEBI:24473 biolink:NamedThing halogen NMDCO_relaxed.owl CHEBI:23116 biolink:NamedThing chlorine atom NMDCO_relaxed.owl CHEBI:24061 biolink:NamedThing fluorine atom NMDCO_relaxed.owl CHEBI:22977 biolink:NamedThing cadmium atom NMDCO_relaxed.owl CHEBI:33340 biolink:NamedThing zinc group element atom NMDCO_relaxed.owl CHEBI:27363 biolink:NamedThing zinc atom NMDCO_relaxed.owl CHEBI:22984 biolink:NamedThing calcium atom NMDCO_relaxed.owl CHEBI:25107 biolink:NamedThing magnesium atom NMDCO_relaxed.owl CHEBI:32594 biolink:NamedThing barium atom NMDCO_relaxed.owl CHEBI:33324 biolink:NamedThing strontium atom NMDCO_relaxed.owl CHEBI:22985 biolink:NamedThing calcium molecular entity NMDCO_relaxed.owl CHEBI:33299 biolink:NamedThing alkaline earth molecular entity NMDCO_relaxed.owl CHEBI:25108 biolink:NamedThing magnesium molecular entity NMDCO_relaxed.owl CHEBI:35217 biolink:NamedThing alkaline earth coordination entity NMDCO_relaxed.owl CHEBI:36364 biolink:NamedThing alkaline earth salt NMDCO_relaxed.owl CHEBI:37133 biolink:NamedThing barium molecular entity NMDCO_relaxed.owl CHEBI:23003 biolink:NamedThing carbamate ester NMDCO_relaxed.owl CHEBI:23004 biolink:NamedThing carbamoyl group The univalent carboacyl group formed by loss of -OH from the carboxy group of carbamic acid. NMDCO_relaxed.owl CHEBI:27207 biolink:NamedThing univalent carboacyl group A univalent carboacyl group is a group formed by loss of OH from the carboxy group of a carboxylic acid. NMDCO_relaxed.owl CHEBI:36963 biolink:NamedThing organooxygen compound An organochalcogen compound containing at least one carbon-oxygen bond. NMDCO_relaxed.owl CHEBI:23016 biolink:NamedThing carbonates NMDCO_relaxed.owl CHEBI:25698 biolink:NamedThing ether NMDCO_relaxed.owl CHEBI:35605 biolink:NamedThing carbon oxoacid NMDCO_relaxed.owl CHEBI:35701 biolink:NamedThing ester A compound formally derived from an oxoacid RkE(=O)l(OH)m (l > 0) and an alcohol, phenol, heteroarenol, or enol by linking with formal loss of water from an acidic hydroxy group of the former and a hydroxy group of the latter. NMDCO_relaxed.owl CHEBI:38104 biolink:NamedThing oxacycle NMDCO_relaxed.owl CHEBI:23019 biolink:NamedThing carbonyl group NMDCO_relaxed.owl CHEBI:51422 biolink:NamedThing organodiyl group Any organic substituent group, regardless of functional type, having two free valences at carbon atom(s). NMDCO_relaxed.owl CHEBI:23042 biolink:NamedThing carotene NMDCO_relaxed.owl CHEBI:35193 biolink:NamedThing tetraterpene NMDCO_relaxed.owl CHEBI:23043 biolink:NamedThing epoxycarotenoid NMDCO_relaxed.owl CHEBI:23045 biolink:NamedThing carotenol NMDCO_relaxed.owl CHEBI:32955 biolink:NamedThing epoxide NMDCO_relaxed.owl CHEBI:26935 biolink:NamedThing tetraterpenoid NMDCO_relaxed.owl CHEBI:24471 biolink:NamedThing halogen molecular entity NMDCO_relaxed.owl CHEBI:24062 biolink:NamedThing fluorine molecular entity NMDCO_relaxed.owl CHEBI:23237 biolink:NamedThing chromium molecular entity NMDCO_relaxed.owl CHEBI:33741 biolink:NamedThing chromium group molecular entity NMDCO_relaxed.owl CHEBI:23357 biolink:NamedThing cofactor An organic molecule or ion (usually a metal ion) that is required by an enzyme for its activity. It may be attached either loosely (coenzyme) or tightly (prosthetic group). NMDCO_relaxed.owl CHEBI:52206 biolink:NamedThing biochemical role A biological role played by the molecular entity or part thereof within a biochemical context. NMDCO_relaxed.owl CHEBI:23924 biolink:NamedThing enzyme inhibitor A compound or agent that combines with an enzyme in such a manner as to prevent the normal substrate-enzyme combination and the catalytic reaction. NMDCO_relaxed.owl CHEBI:25212 biolink:NamedThing metabolite Any intermediate or product resulting from metabolism. The term 'metabolite' subsumes the classes commonly known as primary and secondary metabolites. NMDCO_relaxed.owl CHEBI:23367 biolink:NamedThing molecular entity Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity. NMDCO_relaxed.owl CHEBI:59999 biolink:NamedThing chemical substance A chemical substance is a portion of matter of constant composition, composed of molecular entities of the same type or of different types. NMDCO_relaxed.owl CHEBI:23377 biolink:NamedThing copper molecular entity NMDCO_relaxed.owl CHEBI:33745 biolink:NamedThing copper group molecular entity NMDCO_relaxed.owl CHEBI:33969 biolink:NamedThing gold molecular entity NMDCO_relaxed.owl CHEBI:26191 biolink:NamedThing polyol NMDCO_relaxed.owl CHEBI:8006 biolink:NamedThing Peptidoglycan(N-acetyl-D-glucosamine) NMDCO_relaxed.owl CHEBI:23888 biolink:NamedThing drug Any substance which when absorbed into a living organism may modify one or more of its functions. The term is generally accepted for a substance taken for a therapeutic purpose, but is also commonly used for abused substances. NMDCO_relaxed.owl CHEBI:52217 biolink:NamedThing pharmaceutical Any substance introduced into a living organism with therapeutic or diagnostic purpose. NMDCO_relaxed.owl CHEBI:23905 biolink:NamedThing monoatomic anion NMDCO_relaxed.owl CHEBI:24834 biolink:NamedThing inorganic anion NMDCO_relaxed.owl CHEBI:25696 biolink:NamedThing organic anion Any organic ion with a net negative charge. NMDCO_relaxed.owl CHEBI:33273 biolink:NamedThing polyatomic anion An anion consisting of more than one atom. NMDCO_relaxed.owl CHEBI:36830 biolink:NamedThing monoanion NMDCO_relaxed.owl CHEBI:23906 biolink:NamedThing monoatomic cation NMDCO_relaxed.owl CHEBI:33702 biolink:NamedThing polyatomic cation A cation consisting of more than one atom. NMDCO_relaxed.owl CHEBI:36874 biolink:NamedThing radical cation NMDCO_relaxed.owl CHEBI:36915 biolink:NamedThing inorganic cation NMDCO_relaxed.owl CHEBI:35222 biolink:NamedThing inhibitor A substance that diminishes the rate of a chemical reaction. NMDCO_relaxed.owl CHEBI:24373 biolink:NamedThing glycine derivative NMDCO_relaxed.owl CHEBI:24384 biolink:NamedThing glycogens NMDCO_relaxed.owl CHEBI:37163 biolink:NamedThing glucan A polysaccharide composed of glucose residues. NMDCO_relaxed.owl CHEBI:50906 biolink:NamedThing role A role is particular behaviour which a material entity may exhibit. NMDCO_relaxed.owl PATO:0000068 biolink:NamedThing qualitative NMDCO_relaxed.owl PATO:0000402 biolink:NamedThing branched A branchiness quality inhering in a bearer by virtue of the bearer's having branches. NMDCO_relaxed.owl PATO:0001199 biolink:NamedThing linear A shape quality inhering in a bearer by virtue of the bearer's being narrow, with the two opposite margins parallel. NMDCO_relaxed.owl PATO:0001236 biolink:NamedThing process quality A quality which inheres in an process. NMDCO_relaxed.owl PATO:0001241 biolink:NamedThing physical object quality A quality which inheres in a continuant. NMDCO_relaxed.owl PATO:0001303 biolink:NamedThing variability A quality inhering in a bearer by virtue of the bearer's disposition to varying or changing. NMDCO_relaxed.owl PATO:0002124 biolink:NamedThing laminar A quality inhering in a bearer by virtue of the bearer's processing the form of a thin plate sheet or layer. NMDCO_relaxed.owl UPHENO:0001001 biolink:NamedThing phenotype NMDCO_relaxed.owl CHEBI:24455 biolink:NamedThing guanosine phosphate NMDCO_relaxed.owl CHEBI:61295 biolink:NamedThing guanyl ribonucleotide NMDCO_relaxed.owl CHEBI:33304 biolink:NamedThing chalcogen molecular entity Any p-block molecular entity containing a chalcogen. NMDCO_relaxed.owl CHEBI:33581 biolink:NamedThing boron group molecular entity NMDCO_relaxed.owl CHEBI:33582 biolink:NamedThing carbon group molecular entity NMDCO_relaxed.owl CHEBI:27560 biolink:NamedThing boron atom NMDCO_relaxed.owl CHEBI:27573 biolink:NamedThing silicon atom NMDCO_relaxed.owl CHEBI:33300 biolink:NamedThing pnictogen Any p-block element atom that is in group 15 of the periodic table: nitrogen, phosphorus, arsenic, antimony and bismuth. NMDCO_relaxed.owl CHEBI:33303 biolink:NamedThing chalcogen Any p-block element belonging to the group 16 family of the periodic table. NMDCO_relaxed.owl CHEBI:33306 biolink:NamedThing carbon group element atom NMDCO_relaxed.owl CHEBI:33317 biolink:NamedThing boron group element atom NMDCO_relaxed.owl CHEBI:33598 biolink:NamedThing carbocyclic compound NMDCO_relaxed.owl CHEBI:33659 biolink:NamedThing organic aromatic compound NMDCO_relaxed.owl CHEBI:51958 biolink:NamedThing organic polycyclic compound NMDCO_relaxed.owl CHEBI:5686 biolink:NamedThing heterocyclic compound A cyclic compound having as ring members atoms of at least two different elements. NMDCO_relaxed.owl CHEBI:33670 biolink:NamedThing heteromonocyclic compound NMDCO_relaxed.owl CHEBI:33671 biolink:NamedThing heteropolycyclic compound A polycyclic compound in which at least one of the rings contains at least one non-carbon atom. NMDCO_relaxed.owl CHEBI:33672 biolink:NamedThing heterobicyclic compound A bicyclic compound in which at least one of the rings contains at least one skeletal heteroatom. NMDCO_relaxed.owl CHEBI:24533 biolink:NamedThing heterodetic cyclic peptide A heterodetic cyclic peptide is a peptide consisting only of amino-acid residues, but in which the linkages forming the ring are not solely peptide bonds; one or more is an isopeptide, disulfide, ester, or other bond. NMDCO_relaxed.owl CHEBI:60926 biolink:NamedThing amino monosaccharide NMDCO_relaxed.owl CHEBI:24621 biolink:NamedThing hormone Originally referring to an endogenous compound that is formed in specialized organ or group of cells and carried to another organ or group of cells, in the same organism, upon which it has a specific regulatory function, the term is now commonly used to include non-endogenous, semi-synthetic and fully synthetic analogues of such compounds. NMDCO_relaxed.owl CHEBI:33280 biolink:NamedThing molecular messenger NMDCO_relaxed.owl CHEBI:25512 biolink:NamedThing neurotransmitter An endogenous compound that is used to transmit information across the synapse between a neuron and another cell. NMDCO_relaxed.owl CHEBI:62488 biolink:NamedThing signalling molecule NMDCO_relaxed.owl CHEBI:48705 biolink:NamedThing agonist Substance which binds to cell receptors normally responding to naturally occurring substances and which produces a response of its own. NMDCO_relaxed.owl CHEBI:35507 biolink:NamedThing natural product fundamental parent NMDCO_relaxed.owl CHEBI:35552 biolink:NamedThing heterocyclic organic fundamental parent NMDCO_relaxed.owl CHEBI:24636 biolink:NamedThing proton NMDCO_relaxed.owl CHEBI:29233 biolink:NamedThing deuteron NMDCO_relaxed.owl CHEBI:33253 biolink:NamedThing nucleon Heavy nuclear particle: proton or neutron. NMDCO_relaxed.owl CHEBI:30222 biolink:NamedThing neutron NMDCO_relaxed.owl CHEBI:24651 biolink:NamedThing hydroxides Hydroxides are chemical compounds containing a hydroxy group or salts containing hydroxide (OH(-)). NMDCO_relaxed.owl CHEBI:25806 biolink:NamedThing oxygen molecular entity NMDCO_relaxed.owl CHEBI:25741 biolink:NamedThing oxide An oxide is a chemical compound of oxygen with other chemical elements. NMDCO_relaxed.owl CHEBI:33262 biolink:NamedThing elemental oxygen NMDCO_relaxed.owl CHEBI:33608 biolink:NamedThing hydrogen molecular entity NMDCO_relaxed.owl CHEBI:33692 biolink:NamedThing hydrides Hydrides are chemical compounds of hydrogen with other chemical elements. NMDCO_relaxed.owl CHEBI:37577 biolink:NamedThing heteroatomic molecular entity A molecular entity consisting of two or more chemical elements. NMDCO_relaxed.owl CHEBI:24866 biolink:NamedThing salt A salt is an assembly of cations and anions. NMDCO_relaxed.owl CHEBI:33240 biolink:NamedThing coordination entity NMDCO_relaxed.owl CHEBI:33241 biolink:NamedThing oxoacid derivative NMDCO_relaxed.owl CHEBI:50312 biolink:NamedThing onium compound NMDCO_relaxed.owl CHEBI:24663 biolink:NamedThing hydroxy-5beta-cholanic acid Any member of the class of 5beta-cholanic acids carrying at least one hydroxy group at unspecified position. NMDCO_relaxed.owl CHEBI:33853 biolink:NamedThing phenols Organic aromatic compounds having one or more hydroxy groups attached to a benzene or other arene ring. NMDCO_relaxed.owl CHEBI:84729 biolink:NamedThing hydroxyindoles Any member of the class of indoles carrying at least one hydroxy group. NMDCO_relaxed.owl CHEBI:36248 biolink:NamedThing 5beta-cholanic acids Members of the class of cholanic acids based on a 5beta-cholane skeleton. NMDCO_relaxed.owl CHEBI:36238 biolink:NamedThing 5beta-cholanic acid NMDCO_relaxed.owl CHEBI:24675 biolink:NamedThing hydroxybenzoate NMDCO_relaxed.owl CHEBI:24828 biolink:NamedThing indoles Any compound containing an indole skeleton. NMDCO_relaxed.owl CHEBI:60272 biolink:NamedThing aluminium ion NMDCO_relaxed.owl CHEBI:24835 biolink:NamedThing inorganic molecular entity A molecular entity that contains no carbon. NMDCO_relaxed.owl CHEBI:26519 biolink:NamedThing radical NMDCO_relaxed.owl CHEBI:33259 biolink:NamedThing elemental molecular entity A molecular entity all atoms of which have the same atomic number. NMDCO_relaxed.owl CHEBI:33497 biolink:NamedThing transition element molecular entity A molecular entity containing one or more atoms of a transition element. NMDCO_relaxed.owl CHEBI:36357 biolink:NamedThing polyatomic entity Any molecular entity consisting of more than one atom. NMDCO_relaxed.owl CHEBI:33242 biolink:NamedThing inorganic hydride NMDCO_relaxed.owl CHEBI:33628 biolink:NamedThing elemental aluminium NMDCO_relaxed.owl CHEBI:36871 biolink:NamedThing inorganic radical NMDCO_relaxed.owl CHEBI:25940 biolink:NamedThing peroxides NMDCO_relaxed.owl CHEBI:35406 biolink:NamedThing oxoanion An oxoanion is an anion derived from an oxoacid by loss of hydron(s) bound to oxygen. NMDCO_relaxed.owl CHEBI:24868 biolink:NamedThing organic salt NMDCO_relaxed.owl CHEBI:35175 biolink:NamedThing sulfate salt NMDCO_relaxed.owl CHEBI:35479 biolink:NamedThing alkali metal salt NMDCO_relaxed.owl CHEBI:46718 biolink:NamedThing sulfide salt NMDCO_relaxed.owl CHEBI:51082 biolink:NamedThing nitrate salt NMDCO_relaxed.owl CHEBI:33238 biolink:NamedThing monoatomic entity A monoatomic entity is a molecular entity consisting of a single atom. NMDCO_relaxed.owl CHEBI:33315 biolink:NamedThing monoatomic helium NMDCO_relaxed.owl CHEBI:33433 biolink:NamedThing monoatomic halogen NMDCO_relaxed.owl CHEBI:33627 biolink:NamedThing monoatomic aluminium NMDCO_relaxed.owl CHEBI:49987 biolink:NamedThing monoatomic krypton NMDCO_relaxed.owl CHEBI:49990 biolink:NamedThing monoatomic argon NMDCO_relaxed.owl CHEBI:49994 biolink:NamedThing monoatomic neon NMDCO_relaxed.owl CHEBI:24873 biolink:NamedThing iron molecular entity NMDCO_relaxed.owl CHEBI:33744 biolink:NamedThing iron group molecular entity NMDCO_relaxed.owl CHEBI:24913 biolink:NamedThing isoprenoid NMDCO_relaxed.owl CHEBI:25017 biolink:NamedThing leucine NMDCO_relaxed.owl CHEBI:38263 biolink:NamedThing 2-amino-3-hydroxybutanoic acid NMDCO_relaxed.owl CHEBI:83925 biolink:NamedThing non-proteinogenic alpha-amino acid NMDCO_relaxed.owl CHEBI:25046 biolink:NamedThing linear tetrapyrrole NMDCO_relaxed.owl CHEBI:26932 biolink:NamedThing tetrapyrrole A natural pigment containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next. NMDCO_relaxed.owl CHEBI:36309 biolink:NamedThing cyclic tetrapyrrole NMDCO_relaxed.owl CHEBI:25111 biolink:NamedThing magnesium porphyrin NMDCO_relaxed.owl CHEBI:33743 biolink:NamedThing manganese group molecular entity NMDCO_relaxed.owl CHEBI:25213 biolink:NamedThing metal cation NMDCO_relaxed.owl CHEBI:25430 biolink:NamedThing monoatomic polycation NMDCO_relaxed.owl CHEBI:30412 biolink:NamedThing monoatomic dication NMDCO_relaxed.owl CHEBI:64712 biolink:NamedThing trivalent inorganic cation NMDCO_relaxed.owl CHEBI:26214 biolink:NamedThing porphyrins NMDCO_relaxed.owl CHEBI:33861 biolink:NamedThing transition element coordination entity NMDCO_relaxed.owl CHEBI:25355 biolink:NamedThing mitochondrial respiratory-chain inhibitor NMDCO_relaxed.owl CHEBI:38497 biolink:NamedThing respiratory-chain inhibitor NMDCO_relaxed.owl CHEBI:25367 biolink:NamedThing molecule Any polyatomic entity that is an electrically neutral entity consisting of more than one atom. NMDCO_relaxed.owl CHEBI:33595 biolink:NamedThing cyclic compound Any molecule that consists of a series of atoms joined together to form a ring. NMDCO_relaxed.owl CHEBI:33434 biolink:NamedThing elemental halogen NMDCO_relaxed.owl CHEBI:82663 biolink:NamedThing elemental iron NMDCO_relaxed.owl CHEBI:50795 biolink:NamedThing nanostructure NMDCO_relaxed.owl CHEBI:25375 biolink:NamedThing monoamine molecular messenger A group of neurotransmitters and neuromodulators that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan. NMDCO_relaxed.owl CHEBI:25388 biolink:NamedThing monohydroxybenzoate NMDCO_relaxed.owl CHEBI:25435 biolink:NamedThing mutagen NMDCO_relaxed.owl CHEBI:50902 biolink:NamedThing genotoxin NMDCO_relaxed.owl CHEBI:25442 biolink:NamedThing mycotoxin NMDCO_relaxed.owl CHEBI:27026 biolink:NamedThing toxin NMDCO_relaxed.owl CHEBI:76946 biolink:NamedThing fungal metabolite Any eukaryotic metabolite produced during a metabolic reaction in fungi, the kingdom that includes microorganisms such as the yeasts and moulds. NMDCO_relaxed.owl CHEBI:75772 biolink:NamedThing Saccharomyces cerevisiae metabolite Any fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae). NMDCO_relaxed.owl CHEBI:36785 biolink:NamedThing carbobicyclic compound NMDCO_relaxed.owl CHEBI:35428 biolink:NamedThing ortho-fused bicyclic hydrocarbon NMDCO_relaxed.owl CHEBI:25501 biolink:NamedThing neoxanthin NMDCO_relaxed.owl CHEBI:35307 biolink:NamedThing epoxycarotenol NMDCO_relaxed.owl CHEBI:27295 biolink:NamedThing violaxanthin NMDCO_relaxed.owl CHEBI:44882 biolink:NamedThing peridinin NMDCO_relaxed.owl CHEBI:37602 biolink:NamedThing allenes NMDCO_relaxed.owl CHEBI:37007 biolink:NamedThing nicotinamide dinucleotide NMDCO_relaxed.owl CHEBI:61293 biolink:NamedThing adenyl nucleotide NMDCO_relaxed.owl CHEBI:25527 biolink:NamedThing nicotinamide nucleotide NMDCO_relaxed.owl CHEBI:36980 biolink:NamedThing pyridine nucleotide NMDCO_relaxed.owl CHEBI:27563 biolink:NamedThing arsenic atom NMDCO_relaxed.owl CHEBI:30513 biolink:NamedThing antimony atom NMDCO_relaxed.owl CHEBI:25567 biolink:NamedThing nitrous acid NMDCO_relaxed.owl CHEBI:33455 biolink:NamedThing nitrogen oxoacid NMDCO_relaxed.owl CHEBI:48107 biolink:NamedThing nitric acid NMDCO_relaxed.owl CHEBI:25703 biolink:NamedThing organic phosphate NMDCO_relaxed.owl CHEBI:37734 biolink:NamedThing phosphoric ester NMDCO_relaxed.owl CHEBI:25693 biolink:NamedThing organic heteromonocyclic compound NMDCO_relaxed.owl CHEBI:33833 biolink:NamedThing heteroarene A heterocyclic compound formally derived from an arene by replacement of one or more methine (-C=) and/or vinylene (-CH=CH-) groups by trivalent or divalent heteroatoms, respectively, in such a way as to maintain the continuous pi-electron system characteristic of aromatic systems and a number of out-of-plane pi-electrons corresponding to the Hueckel rule (4n+2). NMDCO_relaxed.owl CHEBI:38166 biolink:NamedThing organic heteropolycyclic compound NMDCO_relaxed.owl CHEBI:26020 biolink:NamedThing phosphate Salts and esters of phosphoric and oligophosphoric acids and their chalcogen analogues. In inorganic chemistry, the term is also used to describe anionic coordination entities with phosphorus as central atom. NMDCO_relaxed.owl CHEBI:25704 biolink:NamedThing organic sulfate Compounds of the general formula SO3HOR where R is an organyl group NMDCO_relaxed.owl CHEBI:26820 biolink:NamedThing sulfates Salts and esters of sulfuric acid NMDCO_relaxed.owl CHEBI:33461 biolink:NamedThing phosphorus oxoanion NMDCO_relaxed.owl CHEBI:36360 biolink:NamedThing phosphorus oxoacids and derivatives NMDCO_relaxed.owl CHEBI:37349 biolink:NamedThing phosphorus oxide NMDCO_relaxed.owl CHEBI:26835 biolink:NamedThing sulfur molecular entity NMDCO_relaxed.owl CHEBI:36902 biolink:NamedThing chalcogen hydride NMDCO_relaxed.owl CHEBI:33265 biolink:NamedThing triatomic oxygen NMDCO_relaxed.owl CHEBI:25900 biolink:NamedThing aldopentose phosphate NMDCO_relaxed.owl CHEBI:35131 biolink:NamedThing aldose phosphate NMDCO_relaxed.owl CHEBI:84055 biolink:NamedThing pentose phosphate NMDCO_relaxed.owl CHEBI:25944 biolink:NamedThing pesticide NMDCO_relaxed.owl CHEBI:27780 biolink:NamedThing detergent NMDCO_relaxed.owl CHEBI:33286 biolink:NamedThing agrochemical An agrochemical is a substance that is used in agriculture or horticulture. NMDCO_relaxed.owl CHEBI:33292 biolink:NamedThing fuel NMDCO_relaxed.owl CHEBI:33893 biolink:NamedThing reagent A substance used in a chemical reaction to detect, measure, examine, or produce other substances. NMDCO_relaxed.owl CHEBI:35204 biolink:NamedThing tracer NMDCO_relaxed.owl CHEBI:35209 biolink:NamedThing label NMDCO_relaxed.owl CHEBI:47867 biolink:NamedThing indicator NMDCO_relaxed.owl CHEBI:50406 biolink:NamedThing probe NMDCO_relaxed.owl CHEBI:64047 biolink:NamedThing food additive Any substance which is added to food to preserve or enhance its flavour and/or appearance. NMDCO_relaxed.owl CHEBI:67079 biolink:NamedThing anti-inflammatory agent Any compound that has anti-inflammatory effects. NMDCO_relaxed.owl CHEBI:76414 biolink:NamedThing propellant NMDCO_relaxed.owl CHEBI:78433 biolink:NamedThing refrigerant A substance used in a thermodynamic heat pump cycle or refrigeration cycle that undergoes a phase change from a gas to a liquid and back. Refrigerants are used in air-conditioning systems and freezers or refrigerators and are assigned a "R" number (by ASHRAE - formerly the American Society of Heating, Refrigerating and Air Conditioning Engineers), which is determined systematically according to their molecular structure. NMDCO_relaxed.owl CHEBI:26079 biolink:NamedThing phosphoric acid derivative NMDCO_relaxed.owl CHEBI:26078 biolink:NamedThing phosphoric acid A phosphorus oxoacid that consists of one oxo and three hydroxy groups joined covalently to a central phosphorus atom. NMDCO_relaxed.owl CHEBI:59698 biolink:NamedThing phosphoric acids Compounds containing one or more phosphoric acid units. NMDCO_relaxed.owl CHEBI:36359 biolink:NamedThing phosphorus oxoacid derivative NMDCO_relaxed.owl CHEBI:26130 biolink:NamedThing biological pigment NMDCO_relaxed.owl CHEBI:52208 biolink:NamedThing biophysical role NMDCO_relaxed.owl CHEBI:26819 biolink:NamedThing sulfuric ester An ester of an alcohol and sulfuric acid. NMDCO_relaxed.owl CHEBI:38252 biolink:NamedThing phorbines NMDCO_relaxed.owl CHEBI:51580 biolink:NamedThing phthalocyanines NMDCO_relaxed.owl CHEBI:26216 biolink:NamedThing potassium atom NMDCO_relaxed.owl CHEBI:30145 biolink:NamedThing lithium atom NMDCO_relaxed.owl CHEBI:30514 biolink:NamedThing caesium atom NMDCO_relaxed.owl CHEBI:26217 biolink:NamedThing potassium molecular entity NMDCO_relaxed.owl CHEBI:33296 biolink:NamedThing alkali metal molecular entity A molecular entity containing one or more atoms of an alkali metal. NMDCO_relaxed.owl CHEBI:26712 biolink:NamedThing sodium molecular entity NMDCO_relaxed.owl CHEBI:26288 biolink:NamedThing propanediol NMDCO_relaxed.owl CHEBI:26395 biolink:NamedThing purine nucleotide NMDCO_relaxed.owl CHEBI:26401 biolink:NamedThing purines NMDCO_relaxed.owl CHEBI:26561 biolink:NamedThing ribonucleotide NMDCO_relaxed.owl CHEBI:47885 biolink:NamedThing dinucleotide NMDCO_relaxed.owl CHEBI:26398 biolink:NamedThing purine ribonucleoside triphosphate NMDCO_relaxed.owl CHEBI:26400 biolink:NamedThing purine ribonucleotide NMDCO_relaxed.owl CHEBI:61292 biolink:NamedThing guanyl nucleotide NMDCO_relaxed.owl CHEBI:37015 biolink:NamedThing ribonucleoside 5'-phosphate NMDCO_relaxed.owl CHEBI:36389 biolink:NamedThing saturated organic heteromonocyclic parent NMDCO_relaxed.owl CHEBI:46926 biolink:NamedThing dioxanes NMDCO_relaxed.owl CHEBI:26490 biolink:NamedThing quinate NMDCO_relaxed.owl CHEBI:26562 biolink:NamedThing ribose phosphate NMDCO_relaxed.owl CHEBI:26607 biolink:NamedThing saturated fatty acid NMDCO_relaxed.owl CHEBI:59202 biolink:NamedThing straight-chain fatty acid NMDCO_relaxed.owl CHEBI:26675 biolink:NamedThing silicic acid NMDCO_relaxed.owl CHEBI:33328 biolink:NamedThing silicon oxoacid NMDCO_relaxed.owl CHEBI:26677 biolink:NamedThing silicon molecular entity NMDCO_relaxed.owl CHEBI:33585 biolink:NamedThing lead molecular entity NMDCO_relaxed.owl CHEBI:26710 biolink:NamedThing sodium chloride NMDCO_relaxed.owl CHEBI:49976 biolink:NamedThing zinc dichloride NMDCO_relaxed.owl CHEBI:26714 biolink:NamedThing sodium salt Any alkali metal salt having sodium(1+) as the cation. NMDCO_relaxed.owl CHEBI:37246 biolink:NamedThing elemental sodium NMDCO_relaxed.owl CHEBI:37826 biolink:NamedThing sulfuric acid derivative NMDCO_relaxed.owl CHEBI:26822 biolink:NamedThing sulfide NMDCO_relaxed.owl CHEBI:33261 biolink:NamedThing organosulfur compound NMDCO_relaxed.owl CHEBI:33402 biolink:NamedThing sulfur oxoacid NMDCO_relaxed.owl CHEBI:33424 biolink:NamedThing sulfur oxoacid derivative NMDCO_relaxed.owl CHEBI:50094 biolink:NamedThing sulfur coordination entity NMDCO_relaxed.owl CHEBI:26836 biolink:NamedThing sulfuric acid A sulfur oxoacid that consists of two oxo and two hydroxy groups joined covalently to a central sulfur atom. NMDCO_relaxed.owl CHEBI:26873 biolink:NamedThing terpenoid NMDCO_relaxed.owl CHEBI:47882 biolink:NamedThing cyclic polypyrrole NMDCO_relaxed.owl CHEBI:36688 biolink:NamedThing heterotricyclic compound NMDCO_relaxed.owl CHEBI:36468 biolink:NamedThing polycyclic ether NMDCO_relaxed.owl CHEBI:51959 biolink:NamedThing organic tricyclic compound NMDCO_relaxed.owl CHEBI:26986 biolink:NamedThing threonine NMDCO_relaxed.owl CHEBI:75763 biolink:NamedThing eukaryotic metabolite Any metabolite produced during a metabolic reaction in eukaryotes, the taxon that include members of the fungi, plantae and animalia kingdoms. NMDCO_relaxed.owl CHEBI:75787 biolink:NamedThing prokaryotic metabolite Any metabolite produced during a metabolic reaction in prokaryotes, the taxon that include members of domains such as the bacteria and archaea. NMDCO_relaxed.owl CHEBI:76206 biolink:NamedThing xenobiotic metabolite Any metabolite produced by metabolism of a xenobiotic compound. NMDCO_relaxed.owl CHEBI:78675 biolink:NamedThing fundamental metabolite Any metabolite produced by all living cells. NMDCO_relaxed.owl CHEBI:64909 biolink:NamedThing poison Any substance that causes disturbance to organisms by chemical reaction or other activity on the molecular scale, when a sufficient quantity is absorbed by the organism. NMDCO_relaxed.owl CHEBI:50910 biolink:NamedThing neurotoxin A poison that interferes with the functions of the nervous system. NMDCO_relaxed.owl CHEBI:27027 biolink:NamedThing micronutrient Any nutrient required in small quantities by organisms throughout their life in order to orchestrate a range of physiological functions. NMDCO_relaxed.owl CHEBI:33284 biolink:NamedThing nutrient A nutrient is a food component that an organism uses to survive and grow. NMDCO_relaxed.owl CHEBI:33937 biolink:NamedThing macronutrient Any nutrient required in large quantities by organisms throughout their life in order to orchestrate a range of physiological functions. Macronutrients are usually chemical elements (carbon, hydrogen, nitrogen, oxygen, phosphorus and sulfur) that humans consume in the largest quantities. Calcium, sodium, magnesium and potassium are sometimes included as macronutrients because they are required in relatively large quantities compared with other vitamins and minerals. NMDCO_relaxed.owl CHEBI:2706 biolink:NamedThing Anatoxin a NMDCO_relaxed.owl CHEBI:27153 biolink:NamedThing monoatomic trication NMDCO_relaxed.owl CHEBI:38460 biolink:NamedThing methylindole NMDCO_relaxed.owl CHEBI:37838 biolink:NamedThing carboacyl group A carboacyl group is a group formed by loss of at least one OH from the carboxy group of a carboxylic acid. NMDCO_relaxed.owl CHEBI:27275 biolink:NamedThing vanadium molecular entity NMDCO_relaxed.owl CHEBI:33746 biolink:NamedThing vanadium group molecular entity NMDCO_relaxed.owl CHEBI:27364 biolink:NamedThing zinc molecular entity NMDCO_relaxed.owl CHEBI:33673 biolink:NamedThing zinc group molecular entity NMDCO_relaxed.owl CHEBI:27369 biolink:NamedThing zwitterion A neutral compound having formal unit electrical charges of opposite sign on non-adjacent atoms. Sometimes referred to as inner salts, dipolar ions (a misnomer). NMDCO_relaxed.owl CHEBI:47901 biolink:NamedThing alkanesulfonic acid NMDCO_relaxed.owl CHEBI:27547 biolink:NamedThing zeaxanthin NMDCO_relaxed.owl CHEBI:28838 biolink:NamedThing lutein NMDCO_relaxed.owl CHEBI:30440 biolink:NamedThing thallium NMDCO_relaxed.owl CHEBI:27638 biolink:NamedThing cobalt atom NMDCO_relaxed.owl CHEBI:33358 biolink:NamedThing cobalt group element atom NMDCO_relaxed.owl CHEBI:28073 biolink:NamedThing chromium atom NMDCO_relaxed.owl CHEBI:28112 biolink:NamedThing nickel atom NMDCO_relaxed.owl CHEBI:28694 biolink:NamedThing copper atom NMDCO_relaxed.owl CHEBI:35195 biolink:NamedThing surfactant NMDCO_relaxed.owl CHEBI:27798 biolink:NamedThing nitrobenzene NMDCO_relaxed.owl CHEBI:51132 biolink:NamedThing nitroarene NMDCO_relaxed.owl CHEBI:27889 biolink:NamedThing lead(0) NMDCO_relaxed.owl CHEBI:37193 biolink:NamedThing elemental lead NMDCO_relaxed.owl CHEBI:33350 biolink:NamedThing chromium group element atom NMDCO_relaxed.owl CHEBI:28685 biolink:NamedThing molybdenum atom NMDCO_relaxed.owl CHEBI:33362 biolink:NamedThing nickel group element atom NMDCO_relaxed.owl CHEBI:28315 biolink:NamedThing alloxanthine NMDCO_relaxed.owl CHEBI:28976 biolink:NamedThing carbonic acid NMDCO_relaxed.owl CHEBI:33366 biolink:NamedThing copper group element atom NMDCO_relaxed.owl CHEBI:30512 biolink:NamedThing silver atom NMDCO_relaxed.owl CHEBI:33567 biolink:NamedThing catecholamine 4-(2-Aminoethyl)pyrocatechol [4-(2-aminoethyl)benzene-1,2-diol] and derivatives formed by substitution. NMDCO_relaxed.owl CHEBI:33570 biolink:NamedThing benzenediols NMDCO_relaxed.owl CHEBI:28798 biolink:NamedThing rubber particle NMDCO_relaxed.owl CHEBI:60029 biolink:NamedThing homopolymer NMDCO_relaxed.owl CHEBI:60160 biolink:NamedThing polyester polymer NMDCO_relaxed.owl CHEBI:60164 biolink:NamedThing ionic polymer An ionic polymer is a polymer, composed of ionic macromolecules. NMDCO_relaxed.owl ENVO:06105005 biolink:NamedThing thermoset polymer A polymer which has been irreversibly hardened by heat-induced curing. NMDCO_relaxed.owl ENVO:06105122 biolink:NamedThing biopolymer A polymer which is the output of a biological process. NMDCO_relaxed.owl ENVO:06105123 biolink:NamedThing synthetic polymer A polymer which is the output of a manufacturing process. NMDCO_relaxed.owl CHEBI:35106 biolink:NamedThing nitrogen hydride NMDCO_relaxed.owl CHEBI:50313 biolink:NamedThing onium cation Mononuclear cations derived by addition of a hydron to a mononuclear parent hydride of the pnictogen, chalcogen and halogen families. NMDCO_relaxed.owl CHEBI:28965 biolink:NamedThing dicarboxylic acid dianion A carboxylic acid dianion obtained by deprotonation of both carboxy groups of any dicarboxylic acid. NMDCO_relaxed.owl CHEBI:35693 biolink:NamedThing dicarboxylic acid anion NMDCO_relaxed.owl CHEBI:38716 biolink:NamedThing carboxylic acid dianion Any dianion containing at least one carboxy group. NMDCO_relaxed.owl CHEBI:36961 biolink:NamedThing chalcocarbonic acid NMDCO_relaxed.owl CHEBI:29067 biolink:NamedThing carboxylic acid anion The conjugate base formed when the carboxy group of a carboxylic acid is deprotonated. NMDCO_relaxed.owl CHEBI:38222 biolink:NamedThing hydrocarbyl anion NMDCO_relaxed.owl CHEBI:59252 biolink:NamedThing linear tetrapyrrole anion An organic anion arising from deprotonation of a acyclic tetrapyrrole compound. NMDCO_relaxed.owl CHEBI:33485 biolink:NamedThing chalcogen oxoanion NMDCO_relaxed.owl CHEBI:35405 biolink:NamedThing transition element oxoanion NMDCO_relaxed.owl CHEBI:37191 biolink:NamedThing silicon oxoanion NMDCO_relaxed.owl CHEBI:33504 biolink:NamedThing alkali metal cation NMDCO_relaxed.owl CHEBI:29125 biolink:NamedThing arsenate(3-) NMDCO_relaxed.owl CHEBI:29237 biolink:NamedThing deuterium atom NMDCO_relaxed.owl CHEBI:29238 biolink:NamedThing tritium atom NMDCO_relaxed.owl CHEBI:29241 biolink:NamedThing silicate(4-) NMDCO_relaxed.owl CHEBI:48123 biolink:NamedThing silicate ion NMDCO_relaxed.owl CHEBI:29438 biolink:NamedThing methanide NMDCO_relaxed.owl CHEBI:30050 biolink:NamedThing gold(0) NMDCO_relaxed.owl CHEBI:33970 biolink:NamedThing elemental gold NMDCO_relaxed.owl CHEBI:30052 biolink:NamedThing copper(0) NMDCO_relaxed.owl CHEBI:37404 biolink:NamedThing elemental copper NMDCO_relaxed.owl CHEBI:30187 biolink:NamedThing aluminium oxide NMDCO_relaxed.owl CHEBI:33623 biolink:NamedThing aluminium oxides NMDCO_relaxed.owl CHEBI:30212 biolink:NamedThing photon Particle of zero charge, zero rest mass, spin quantum number 1, energy hnu and momentum hnu/c (h is the Planck constant, nu the frequency of radiation and c the speed of light), carrier of electromagnetic force. NMDCO_relaxed.owl CHEBI:36341 biolink:NamedThing boson Particle of integer spin quantum number following Bose-Einstein statistics. Bosons are named after Satyendra Nath Bose. NMDCO_relaxed.owl CHEBI:33316 biolink:NamedThing helium(2+) NMDCO_relaxed.owl CHEBI:30218 biolink:NamedThing helium-3 atom NMDCO_relaxed.owl CHEBI:30356 biolink:NamedThing isobutyl group NMDCO_relaxed.owl CHEBI:50325 biolink:NamedThing proteinogenic amino-acid side-chain group NMDCO_relaxed.owl CHEBI:30496 biolink:NamedThing sulfur hexafluoride NMDCO_relaxed.owl CHEBI:30563 biolink:NamedThing silicon dioxide NMDCO_relaxed.owl CHEBI:30762 biolink:NamedThing salicylate NMDCO_relaxed.owl CHEBI:3098 biolink:NamedThing bile acid Any member of a group of hydroxy-5beta-cholanic acids occuring in bile, where they are present as the sodium salts of their amides with glycine or taurine. In mammals bile acids almost invariably have 5beta-configuration. NMDCO_relaxed.owl CHEBI:31001 biolink:NamedThing octacosanoic acid NMDCO_relaxed.owl CHEBI:39418 biolink:NamedThing straight-chain saturated fatty acid NMDCO_relaxed.owl CHEBI:31002 biolink:NamedThing octacosanoate NMDCO_relaxed.owl CHEBI:58954 biolink:NamedThing straight-chain saturated fatty acid anion NMDCO_relaxed.owl CHEBI:78130 biolink:NamedThing fatty acid anion 28:0 NMDCO_relaxed.owl CHEBI:32234 biolink:NamedThing titanium dioxide NMDCO_relaxed.owl CHEBI:32627 biolink:NamedThing leucinate NMDCO_relaxed.owl CHEBI:32628 biolink:NamedThing leucinium NMDCO_relaxed.owl CHEBI:33719 biolink:NamedThing alpha-amino-acid cation NMDCO_relaxed.owl CHEBI:37407 biolink:NamedThing cyclic ether NMDCO_relaxed.owl CHEBI:32988 biolink:NamedThing amide An amide is a derivative of an oxoacid RkE(=O)l(OH)m (l =/= 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group. NMDCO_relaxed.owl CHEBI:33267 biolink:NamedThing elemental nitrogen NMDCO_relaxed.owl CHEBI:35715 biolink:NamedThing nitro compound NMDCO_relaxed.owl CHEBI:32999 biolink:NamedThing europium atom NMDCO_relaxed.owl CHEBI:33319 biolink:NamedThing lanthanoid atom NMDCO_relaxed.owl CHEBI:33336 biolink:NamedThing lanthanum atom NMDCO_relaxed.owl CHEBI:33369 biolink:NamedThing cerium NMDCO_relaxed.owl CHEBI:33372 biolink:NamedThing neodymium atom NMDCO_relaxed.owl CHEBI:33374 biolink:NamedThing samarium atom NMDCO_relaxed.owl CHEBI:33375 biolink:NamedThing gadolinium atom NMDCO_relaxed.owl CHEBI:33377 biolink:NamedThing dysprosium atom NMDCO_relaxed.owl CHEBI:49828 biolink:NamedThing praseodymium atom NMDCO_relaxed.owl CHEBI:33562 biolink:NamedThing f-block element atom NMDCO_relaxed.owl CHEBI:35156 biolink:NamedThing calcium salt NMDCO_relaxed.owl CHEBI:46721 biolink:NamedThing carbonate salt NMDCO_relaxed.owl CHEBI:33233 biolink:NamedThing fundamental particle A particle not known to have substructure. NMDCO_relaxed.owl CHEBI:36340 biolink:NamedThing fermion Particle of half-integer spin quantum number following Fermi-Dirac statistics. Fermions are named after Enrico Fermi. NMDCO_relaxed.owl CHEBI:36343 biolink:NamedThing composite particle A subatomic particle known to have substructure (i.e. consisting of smaller particles). NMDCO_relaxed.owl CHEBI:36347 biolink:NamedThing nuclear particle A nucleus or any of its constituents in any of their energy states. NMDCO_relaxed.owl CHEBI:37175 biolink:NamedThing organic hydride NMDCO_relaxed.owl CHEBI:33249 biolink:NamedThing organyl group Any organic substituent group, regardless of functional type, having one free valence at a carbon atom. NMDCO_relaxed.owl CHEBI:46883 biolink:NamedThing carboxy group NMDCO_relaxed.owl CHEBI:36339 biolink:NamedThing baryon Baryon is a fermion that does experience the strong force (strong interaction). The term is derived from the Greek betaalpharhoupsilonsigma (heavy). NMDCO_relaxed.owl CHEBI:33256 biolink:NamedThing primary amide A derivative of an oxoacid RkE(=O)l(OH)m (l =/= 0) in which an acidic hydroxy group has been replaced by an amino or substituted amino group. NMDCO_relaxed.owl CHEBI:33281 biolink:NamedThing antimicrobial agent A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans. NMDCO_relaxed.owl CHEBI:52209 biolink:NamedThing aetiopathogenetic role A role played by the molecular entity or part thereof which causes the development of a pathological process. NMDCO_relaxed.owl CHEBI:52210 biolink:NamedThing pharmacological role A biological role which describes how a drug interacts within a biological system and how the interactions affect its medicinal properties. NMDCO_relaxed.owl CHEBI:52211 biolink:NamedThing physiological role NMDCO_relaxed.owl CHEBI:53000 biolink:NamedThing epitope The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds. NMDCO_relaxed.owl CHEBI:78295 biolink:NamedThing food component A physiological role played by any substance that is distributed in foodstuffs. It includes materials derived from plants or animals, such as vitamins or minerals, as well as environmental contaminants. NMDCO_relaxed.owl CHEBI:33287 biolink:NamedThing fertilizer A fertilizer is any substance that is added to soil or water to assist the growth of plants. NMDCO_relaxed.owl CHEBI:33290 biolink:NamedThing food NMDCO_relaxed.owl CHEBI:33679 biolink:NamedThing helium molecular entity NMDCO_relaxed.owl CHEBI:33680 biolink:NamedThing elemental helium NMDCO_relaxed.owl CHEBI:33687 biolink:NamedThing diatomic helium NMDCO_relaxed.owl CHEBI:33321 biolink:NamedThing rare earth metal atom NMDCO_relaxed.owl CHEBI:33331 biolink:NamedThing yttrium atom NMDCO_relaxed.owl CHEBI:33335 biolink:NamedThing scandium group element atom NMDCO_relaxed.owl CHEBI:33561 biolink:NamedThing d-block element atom NMDCO_relaxed.owl CHEBI:37190 biolink:NamedThing silicon coordination entity NMDCO_relaxed.owl CHEBI:46890 biolink:NamedThing silicon hydroxide NMDCO_relaxed.owl CHEBI:33484 biolink:NamedThing chalcogen oxoacid NMDCO_relaxed.owl CHEBI:33345 biolink:NamedThing titanium group element atom NMDCO_relaxed.owl CHEBI:33347 biolink:NamedThing vanadium group element atom NMDCO_relaxed.owl CHEBI:33341 biolink:NamedThing titanium atom NMDCO_relaxed.owl CHEBI:33344 biolink:NamedThing niobium atom NMDCO_relaxed.owl CHEBI:33400 biolink:NamedThing platinum(0) NMDCO_relaxed.owl CHEBI:49202 biolink:NamedThing elemental platinum NMDCO_relaxed.owl CHEBI:36892 biolink:NamedThing elemental fluorine NMDCO_relaxed.owl CHEBI:33447 biolink:NamedThing phospho sugar NMDCO_relaxed.owl CHEBI:63409 biolink:NamedThing pentose derivative NMDCO_relaxed.owl CHEBI:33457 biolink:NamedThing phosphorus oxoacid A pnictogen oxoacid which contains phosphorus and oxygen, at least one hydrogen atom bound to oxygen, and forms an ion by the loss of one or more protons. NMDCO_relaxed.owl CHEBI:33498 biolink:NamedThing actinoid molecular entity NMDCO_relaxed.owl CHEBI:33677 biolink:NamedThing f-block molecular entity NMDCO_relaxed.owl CHEBI:33499 biolink:NamedThing uranium molecular entity NMDCO_relaxed.owl CHEBI:63062 biolink:NamedThing aluminium cation NMDCO_relaxed.owl CHEBI:33551 biolink:NamedThing organosulfonic acid NMDCO_relaxed.owl CHEBI:33552 biolink:NamedThing sulfonic acid derivative NMDCO_relaxed.owl CHEBI:33566 biolink:NamedThing catechols Any compound containing an o-diphenol component. NMDCO_relaxed.owl CHEBI:33597 biolink:NamedThing homocyclic compound NMDCO_relaxed.owl CHEBI:33635 biolink:NamedThing polycyclic compound NMDCO_relaxed.owl CHEBI:33636 biolink:NamedThing bicyclic compound A molecule that features two fused rings. NMDCO_relaxed.owl CHEBI:33655 biolink:NamedThing aromatic compound A cyclically conjugated molecular entity with a stability (due to delocalization) significantly greater than that of a hypothetical localized structure (e.g. Kekule structure) is said to possess aromatic character. NMDCO_relaxed.owl CHEBI:33661 biolink:NamedThing monocyclic compound NMDCO_relaxed.owl CHEBI:35295 biolink:NamedThing homopolycyclic compound NMDCO_relaxed.owl CHEBI:33620 biolink:NamedThing aluminium molecular entity NMDCO_relaxed.owl CHEBI:33637 biolink:NamedThing ortho-fused compound NMDCO_relaxed.owl CHEBI:35293 biolink:NamedThing fused compound NMDCO_relaxed.owl CHEBI:51689 biolink:NamedThing enone NMDCO_relaxed.owl CHEBI:33645 biolink:NamedThing acyclic olefin NMDCO_relaxed.owl CHEBI:33646 biolink:NamedThing alkadiene NMDCO_relaxed.owl CHEBI:33658 biolink:NamedThing arene NMDCO_relaxed.owl CHEBI:33664 biolink:NamedThing monocyclic hydrocarbon NMDCO_relaxed.owl CHEBI:33666 biolink:NamedThing polycyclic hydrocarbon NMDCO_relaxed.owl CHEBI:33662 biolink:NamedThing annulene NMDCO_relaxed.owl CHEBI:35294 biolink:NamedThing carbopolycyclic compound NMDCO_relaxed.owl CHEBI:33676 biolink:NamedThing d-block molecular entity A d-block molecular entity is a molecular entity containing one or more atoms of a d-block element. NMDCO_relaxed.owl CHEBI:33747 biolink:NamedThing nickel group molecular entity NMDCO_relaxed.owl CHEBI:33768 biolink:NamedThing titanium group molecular entity NMDCO_relaxed.owl CHEBI:36907 biolink:NamedThing neon molecular entity NMDCO_relaxed.owl CHEBI:36908 biolink:NamedThing argon molecular entity NMDCO_relaxed.owl CHEBI:36909 biolink:NamedThing krypton molecular entity NMDCO_relaxed.owl CHEBI:33700 biolink:NamedThing proteinogenic amino-acid residue NMDCO_relaxed.owl CHEBI:33710 biolink:NamedThing alpha-amino-acid residue NMDCO_relaxed.owl CHEBI:33703 biolink:NamedThing amino-acid cation NMDCO_relaxed.owl CHEBI:33721 biolink:NamedThing carbohydrate acid anion NMDCO_relaxed.owl CHEBI:50160 biolink:NamedThing steroid acid anion Any anion formed by loss of a proton from a steroid acid. NMDCO_relaxed.owl CHEBI:33749 biolink:NamedThing platinum molecular entity NMDCO_relaxed.owl CHEBI:33791 biolink:NamedThing canonical nucleoside residue NMDCO_relaxed.owl CHEBI:33792 biolink:NamedThing canonical ribonucleoside residue NMDCO_relaxed.owl CHEBI:33793 biolink:NamedThing canonical deoxyribonucleoside residue NMDCO_relaxed.owl CHEBI:33847 biolink:NamedThing monocyclic arene NMDCO_relaxed.owl CHEBI:33848 biolink:NamedThing polycyclic arene NMDCO_relaxed.owl CHEBI:33976 biolink:NamedThing magnesium coordination entity NMDCO_relaxed.owl CHEBI:34970 biolink:NamedThing saxitoxin NMDCO_relaxed.owl CHEBI:35170 biolink:NamedThing vanadium(0) NMDCO_relaxed.owl CHEBI:35171 biolink:NamedThing elemental vanadium NMDCO_relaxed.owl CHEBI:35230 biolink:NamedThing fossil fuel NMDCO_relaxed.owl CHEBI:35238 biolink:NamedThing amino acid zwitterion The zwitterionic form of an amino acid having a negatively charged carboxyl group and a positively charged amino group. NMDCO_relaxed.owl CHEBI:60466 biolink:NamedThing peptide zwitterion Zwitterionic form of any peptide where, in general, the amino terminus is positively charged and the carboxy terminus is negatively charged. NMDCO_relaxed.owl CHEBI:35296 biolink:NamedThing ortho-fused polycyclic arene NMDCO_relaxed.owl CHEBI:35427 biolink:NamedThing ortho-fused polycyclic hydrocarbon NMDCO_relaxed.owl CHEBI:35402 biolink:NamedThing chromium oxoanion NMDCO_relaxed.owl CHEBI:35403 biolink:NamedThing chromium coordination entity NMDCO_relaxed.owl CHEBI:35441 biolink:NamedThing antiinfective agent NMDCO_relaxed.owl CHEBI:35472 biolink:NamedThing anti-inflammatory drug A substance that reduces or suppresses inflammation. NMDCO_relaxed.owl CHEBI:35480 biolink:NamedThing analgesic NMDCO_relaxed.owl CHEBI:35554 biolink:NamedThing cardiovascular drug A drug that affects the rate or intensity of cardiac contraction, blood vessel diameter or blood volume. NMDCO_relaxed.owl CHEBI:35942 biolink:NamedThing neurotransmitter agent A substance used for its pharmacological action on any aspect of neurotransmitter systems. Neurotransmitter agents include agonists, antagonists, degradation inhibitors, uptake inhibitors, depleters, precursors, and modulators of receptor function. NMDCO_relaxed.owl CHEBI:38867 biolink:NamedThing anaesthetic NMDCO_relaxed.owl CHEBI:48706 biolink:NamedThing antagonist NMDCO_relaxed.owl CHEBI:35524 biolink:NamedThing sympathomimetic agent A drug that mimics the effects of stimulating postganglionic adrenergic sympathetic nerves. Included in this class are drugs that directly stimulate adrenergic receptors and drugs that act indirectly by provoking the release of adrenergic transmitters. NMDCO_relaxed.owl CHEBI:37962 biolink:NamedThing adrenergic agent Any agent that acts on an adrenergic receptor or affects the life cycle of an adrenergic transmitter. NMDCO_relaxed.owl CHEBI:37886 biolink:NamedThing adrenergic agonist An agent that selectively binds to and activates adrenergic receptors. NMDCO_relaxed.owl CHEBI:48539 biolink:NamedThing alpha-adrenergic drug Any drug that acts on an alpha-adrenergic receptor. NMDCO_relaxed.owl CHEBI:35569 biolink:NamedThing alpha-adrenergic agonist An agent that selectively binds to and activates alpha-adrenergic receptors. NMDCO_relaxed.owl CHEBI:35620 biolink:NamedThing vasodilator agent A drug used to cause dilation of the blood vessels. NMDCO_relaxed.owl CHEBI:50514 biolink:NamedThing vasoconstrictor agent Drug used to cause constriction of the blood vessels. NMDCO_relaxed.owl CHEBI:35722 biolink:NamedThing sulfated glycosaminoglycan NMDCO_relaxed.owl CHEBI:3992 biolink:NamedThing cyclic ketone NMDCO_relaxed.owl CHEBI:51721 biolink:NamedThing alpha,beta-unsaturated ketone NMDCO_relaxed.owl CHEBI:36237 biolink:NamedThing cholanic acid A steroid acid that consists of cholane having a carboxy group in place of the methyl group at position 24. NMDCO_relaxed.owl CHEBI:36344 biolink:NamedThing hadron Hadron is a subatomic particle which experiences the strong force. NMDCO_relaxed.owl CHEBI:36388 biolink:NamedThing saturated organic heterocyclic parent NMDCO_relaxed.owl CHEBI:36878 biolink:NamedThing inorganic radical ion NMDCO_relaxed.owl CHEBI:36879 biolink:NamedThing inorganic radical cation NMDCO_relaxed.owl CHEBI:36927 biolink:NamedThing carbon-14 atom NMDCO_relaxed.owl CHEBI:36928 biolink:NamedThing carbon-13 atom NMDCO_relaxed.owl CHEBI:36934 biolink:NamedThing nitrogen-15 atom NMDCO_relaxed.owl CHEBI:37076 biolink:NamedThing ribonucleoside 5'-triphosphate NMDCO_relaxed.owl CHEBI:37134 biolink:NamedThing elemental barium NMDCO_relaxed.owl CHEBI:37376 biolink:NamedThing tetraphosphorus decaoxide NMDCO_relaxed.owl CHEBI:80043 biolink:NamedThing Nodularin NMDCO_relaxed.owl CHEBI:38323 biolink:NamedThing cholinergic drug Any drug used for its actions on cholinergic systems. Included here are agonists and antagonists, drugs that affect the life cycle of acetylcholine, and drugs that affect the survival of cholinergic neurons. NMDCO_relaxed.owl CHEBI:38324 biolink:NamedThing cholinergic agonist Any drug that binds to and activates cholinergic receptors. NMDCO_relaxed.owl CHEBI:38325 biolink:NamedThing muscarinic agonist Any drug that binds to and activates a muscarinic cholinergic receptor. NMDCO_relaxed.owl CHEBI:38496 biolink:NamedThing electron-transport chain inhibitor NMDCO_relaxed.owl CHEBI:76932 biolink:NamedThing pathway inhibitor NMDCO_relaxed.owl CHEBI:38869 biolink:NamedThing general anaesthetic NMDCO_relaxed.owl CHEBI:38870 biolink:NamedThing inhalation anaesthetic NMDCO_relaxed.owl CHEBI:51129 biolink:NamedThing nitrohydrocarbon NMDCO_relaxed.owl CHEBI:39478 biolink:NamedThing buta-1,3-diene NMDCO_relaxed.owl CHEBI:39479 biolink:NamedThing butadiene NMDCO_relaxed.owl CHEBI:43176 biolink:NamedThing hydroxy group NMDCO_relaxed.owl CHEBI:46629 biolink:NamedThing oxo group NMDCO_relaxed.owl CHEBI:46661 biolink:NamedThing asbestos NMDCO_relaxed.owl CHEBI:46665 biolink:NamedThing riebeckite NMDCO_relaxed.owl CHEBI:46670 biolink:NamedThing serpentine mineral NMDCO_relaxed.owl CHEBI:46679 biolink:NamedThing gruenerite NMDCO_relaxed.owl CHEBI:46681 biolink:NamedThing anthophyllite NMDCO_relaxed.owl CHEBI:46683 biolink:NamedThing actinolite NMDCO_relaxed.owl CHEBI:46664 biolink:NamedThing chrysotile NMDCO_relaxed.owl CHEBI:46680 biolink:NamedThing serpentine asbestos NMDCO_relaxed.owl CHEBI:46666 biolink:NamedThing crocidolite asbestos NMDCO_relaxed.owl CHEBI:46677 biolink:NamedThing amphibole asbestos NMDCO_relaxed.owl CHEBI:46676 biolink:NamedThing tremolite asbestos NMDCO_relaxed.owl CHEBI:46678 biolink:NamedThing amosite asbestos NMDCO_relaxed.owl CHEBI:46682 biolink:NamedThing anthophyllite asbestos NMDCO_relaxed.owl CHEBI:46684 biolink:NamedThing actinolite asbestos NMDCO_relaxed.owl CHEBI:46923 biolink:NamedThing dioxane NMDCO_relaxed.owl CHEBI:47788 biolink:NamedThing 3-oxo steroid NMDCO_relaxed.owl CHEBI:48041 biolink:NamedThing microcystin NMDCO_relaxed.owl CHEBI:64628 biolink:NamedThing somatostatin A fourteen-membered heterodetic cyclic peptide comprising the sequence Ala-Gly-Cys-Lys-Asn-Phe-Phe-Trp-Lys-Thr-Phe-Thr-Ser-Cys cyclised by a disulfide bridge between the two Cys residues at positions 3 and 14. NMDCO_relaxed.owl CHEBI:48218 biolink:NamedThing antiseptic drug NMDCO_relaxed.owl CHEBI:48219 biolink:NamedThing disinfectant NMDCO_relaxed.owl CHEBI:65256 biolink:NamedThing antimicrobial food preservative A food preservative which prevents decomposition of food by preventing the growth of fungi or bacteria. In European countries, E-numbers for permitted food preservatives are from E200 to E299, divided into sorbates (E200-209), benzoates (E210-219), sulfites (E220-229), phenols and formates (E230-239), nitrates (E240-259), acetates (E260-269), lactates (E270-279), propionates (E280-289) and others (E290-299). NMDCO_relaxed.owl CHEBI:48354 biolink:NamedThing polar solvent A solvent that is composed of polar molecules. Polar solvents can dissolve ionic compounds or ionisable covalent compounds. NMDCO_relaxed.owl CHEBI:48359 biolink:NamedThing protophilic solvent NMDCO_relaxed.owl CHEBI:48360 biolink:NamedThing amphiprotic solvent NMDCO_relaxed.owl CHEBI:49470 biolink:NamedThing aluminium(3+) NMDCO_relaxed.owl CHEBI:49936 biolink:NamedThing uranium(0) NMDCO_relaxed.owl CHEBI:50558 biolink:NamedThing monoatomic uranium NMDCO_relaxed.owl CHEBI:49986 biolink:NamedThing elemental krypton NMDCO_relaxed.owl CHEBI:49991 biolink:NamedThing elemental argon NMDCO_relaxed.owl CHEBI:49992 biolink:NamedThing argon(.1+) NMDCO_relaxed.owl CHEBI:49995 biolink:NamedThing elemental neon NMDCO_relaxed.owl CHEBI:50183 biolink:NamedThing P450 inhibitor NMDCO_relaxed.owl CHEBI:76898 biolink:NamedThing EC 1.14.14.1 (unspecific monooxygenase) inhibitor NMDCO_relaxed.owl CHEBI:50297 biolink:NamedThing canonical nucleotide residue NMDCO_relaxed.owl CHEBI:50298 biolink:NamedThing canonical deoxyribonucleotide residue NMDCO_relaxed.owl CHEBI:50299 biolink:NamedThing canonical ribonucleotide residue NMDCO_relaxed.owl CHEBI:50559 biolink:NamedThing elemental uranium NMDCO_relaxed.owl CHEBI:50594 biolink:NamedThing carbon nanotube NMDCO_relaxed.owl CHEBI:50796 biolink:NamedThing nanotube NMDCO_relaxed.owl CHEBI:50812 biolink:NamedThing carbon nanostructure NMDCO_relaxed.owl CHEBI:50816 biolink:NamedThing iron oxide NMDCO_relaxed.owl CHEBI:75896 biolink:NamedThing iron sulfides NMDCO_relaxed.owl CHEBI:50904 biolink:NamedThing allergen NMDCO_relaxed.owl CHEBI:53225 biolink:NamedThing poly(alkylene) macromolecule NMDCO_relaxed.owl CHEBI:53226 biolink:NamedThing polyethylene macromolecule NMDCO_relaxed.owl CHEBI:53242 biolink:NamedThing vinyl polymer macromolecule NMDCO_relaxed.owl CHEBI:53550 biolink:NamedThing poly(propylene) NMDCO_relaxed.owl CHEBI:53243 biolink:NamedThing poly(vinyl chloride) NMDCO_relaxed.owl CHEBI:53309 biolink:NamedThing polyanionic macromolecule A polymer carrying multiple negative charges. NMDCO_relaxed.owl CHEBI:53387 biolink:NamedThing poly(hydroxyalkanoate) NMDCO_relaxed.owl CHEBI:53388 biolink:NamedThing poly(hydroxybutyrate) NMDCO_relaxed.owl CHEBI:5391 biolink:NamedThing glucagon A 29-amino acid peptide hormone consisting of His, Ser, Gln, Gly, Thr, Phe, Thr, Ser, Asp, Tyr, Ser, Lys, Tyr, Leu, Asp, Ser, Arg, Arg, Ala, Gln, Asp, Phe, Val, Gln, Trp, Leu, Met, Asn and Thr residues joined in sequence. NMDCO_relaxed.owl CHEBI:58416 biolink:NamedThing chlorophyll a(1-) NMDCO_relaxed.owl CHEBI:58454 biolink:NamedThing kynurenate NMDCO_relaxed.owl CHEBI:58953 biolink:NamedThing saturated fatty acid anion NMDCO_relaxed.owl CHEBI:59163 biolink:NamedThing biomarker NMDCO_relaxed.owl CHEBI:59739 biolink:NamedThing electrophilic reagent NMDCO_relaxed.owl CHEBI:59740 biolink:NamedThing nucleophilic reagent A reagent that forms a bond to its reaction partner (the electrophile) by donating both bonding electrons. NMDCO_relaxed.owl CHEBI:60031 biolink:NamedThing poly(alkylene) polymer NMDCO_relaxed.owl CHEBI:60737 biolink:NamedThing polyurethane polymer NMDCO_relaxed.owl CHEBI:60034 biolink:NamedThing polyethylene polymer NMDCO_relaxed.owl CHEBI:60643 biolink:NamedThing NMDA receptor antagonist NMDCO_relaxed.owl CHEBI:60798 biolink:NamedThing excitatory amino acid antagonist NMDCO_relaxed.owl CHEBI:61250 biolink:NamedThing brevetoxin A NMDCO_relaxed.owl CHEBI:61275 biolink:NamedThing ciguatoxin NMDCO_relaxed.owl CHEBI:80770 biolink:NamedThing Brevetoxin B NMDCO_relaxed.owl CHEBI:61452 biolink:NamedThing poly(ethylene terephthalate) polymer NMDCO_relaxed.owl CHEBI:61614 biolink:NamedThing vinyl polymer NMDCO_relaxed.owl CHEBI:61642 biolink:NamedThing polystyrene polymer NMDCO_relaxed.owl CHEBI:64049 biolink:NamedThing food acidity regulator A food additive that is used to change or otherwise control the acidity or alkalinity of foods. They may be acids, bases, neutralising agents or buffering agents. NMDCO_relaxed.owl CHEBI:65255 biolink:NamedThing food preservative Substances which are added to food in order to prevent decomposition caused by microbial growth or by undesirable chemical changes. NMDCO_relaxed.owl CHEBI:77971 biolink:NamedThing raising agent NMDCO_relaxed.owl CHEBI:77974 biolink:NamedThing food packaging gas A food additive that is a (generally inert) gas which is used to envelop foodstuffs during packing and so protect them from unwanted chemical reactions such as food spoilage or oxidation during subsequent transport and storage. The term includes propellant gases, used to expel foods from a container. NMDCO_relaxed.owl CHEBI:78017 biolink:NamedThing food propellant NMDCO_relaxed.owl CHEBI:73398 biolink:NamedThing indole skeleton A mancude heterobicyclic organic group consisting of a benzene ring fused to a pyrrole ring. NMDCO_relaxed.owl CHEBI:73541 biolink:NamedThing organic heterobicyclic ring A bicyclic organic group that contains both carbon and hetero atoms. NMDCO_relaxed.owl CHEBI:75767 biolink:NamedThing animal metabolite Any eukaryotic metabolite produced during a metabolic reaction in animals that include diverse creatures from sponges, insects to mammals. NMDCO_relaxed.owl CHEBI:76924 biolink:NamedThing plant metabolite Any eukaryotic metabolite produced during a metabolic reaction in plants, the kingdom that include flowering plants, conifers and other gymnosperms. NMDCO_relaxed.owl CHEBI:84735 biolink:NamedThing algal metabolite Any eukaryotic metabolite produced during a metabolic reaction in algae including unicellular organisms like chlorella and diatoms to multicellular organisms like giant kelps and brown algae. NMDCO_relaxed.owl CHEBI:75768 biolink:NamedThing mammalian metabolite Any animal metabolite produced during a metabolic reaction in mammals. NMDCO_relaxed.owl CHEBI:83039 biolink:NamedThing crustacean metabolite An animal metabolite produced by arthropods such as crabs, lobsters, crayfish, shrimps and krill. NMDCO_relaxed.owl CHEBI:75771 biolink:NamedThing mouse metabolite Any mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus). NMDCO_relaxed.owl CHEBI:77746 biolink:NamedThing human metabolite Any mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens). NMDCO_relaxed.owl CHEBI:75897 biolink:NamedThing iron(2+) sulfides NMDCO_relaxed.owl CHEBI:76725 biolink:NamedThing EC 1.* (oxidoreductase) inhibitor NMDCO_relaxed.owl CHEBI:76759 biolink:NamedThing EC 3.* (hydrolase) inhibitor Any enzyme inhibitor that interferes with the action of a hydrolase (EC 3.*.*.*). NMDCO_relaxed.owl CHEBI:76741 biolink:NamedThing EC 1.14.* (oxidoreductase acting on paired donors, with incorporation or reduction of molecular oxygen) inhibitor NMDCO_relaxed.owl CHEBI:76764 biolink:NamedThing EC 3.5.* (hydrolases acting on non-peptide C-N bonds) inhibitor Any hydrolase inhibitor that interferes with the action of a hydrolase acting on C-N bonds, other than peptide bonds (EC 3.5.*.*). NMDCO_relaxed.owl CHEBI:76807 biolink:NamedThing EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitor An EC 3.5.* (hydrolases acting on non-peptide C-N bonds) inhibitor that interferes with the action of any non-peptide linear amide C-N hydrolase (EC 3.5.1.*). NMDCO_relaxed.owl CHEBI:76838 biolink:NamedThing EC 1.14.14.* (oxidoreductase acting on paired donors, incorporating of 1 atom of oxygen, with reduced flavin or flavoprotein as one donor) inhibitor NMDCO_relaxed.owl CHEBI:76967 biolink:NamedThing human xenobiotic metabolite Any human metabolite produced by metabolism of a xenobiotic compound in humans. NMDCO_relaxed.owl CHEBI:76969 biolink:NamedThing bacterial metabolite Any prokaryotic metabolite produced during a metabolic reaction in bacteria. NMDCO_relaxed.owl CHEBI:76971 biolink:NamedThing Escherichia coli metabolite Any bacterial metabolite produced during a metabolic reaction in Escherichia coli. NMDCO_relaxed.owl CHEBI:77941 biolink:NamedThing EC 3.5.1.4 (amidase) inhibitor An EC 3.5.1.* (non-peptide linear amide C-N hydrolase) inhibitor that interferes with the action of amidase (EC 3.5.1.4). NMDCO_relaxed.owl CHEBI:78608 biolink:NamedThing alpha-amino acid zwitterion An amino acid zwitterion obtained by transfer of a proton from the carboxy to the amino group of any alpha-amino acid; major species at pH 7.3. NMDCO_relaxed.owl CHEBI:8108 biolink:NamedThing pheophytin NMDCO_relaxed.owl CHEBI:82664 biolink:NamedThing iron(0) NMDCO_relaxed.owl CHEBI:83056 biolink:NamedThing Daphnia magna metabolite A Daphnia metabolite produced by the species Daphnia magna. NMDCO_relaxed.owl CHEBI:83057 biolink:NamedThing Daphnia metabolite A crustacean metabolite produced by the genus of small planktonic arthropods, Daphnia NMDCO_relaxed.owl CHEBI:83348 biolink:NamedThing chlorophyllide a(2-) NMDCO_relaxed.owl CHEBI:86471 biolink:NamedThing pyrite NMDCO_relaxed.owl CHEBI:9171 biolink:NamedThing skatole NMDCO_relaxed.owl CL:0000000 biolink:NamedThing cell A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.|A material entity that has a plasma membrane and results from cellular division. NMDCO_relaxed.owl UBERON:0000061 biolink:NamedThing anatomical structure Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome. NMDCO_relaxed.owl FAO:0000001 biolink:NamedThing fungal structure An anatomical structure that forms all or part of a fungus. NMDCO_relaxed.owl GO:0110165 biolink:NamedThing cellular anatomical entity A part of a cellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex but below that of an anatomical system. Or, a substance produced by a cellular organism with granularity above the level of a protein complex. NMDCO_relaxed.owl UBERON:0000045 biolink:NamedThing ganglion A biological tissue mass, most commonly a mass of nerve cell bodies. NMDCO_relaxed.owl UBERON:0000077 biolink:NamedThing mixed endoderm/mesoderm-derived structure An anatomical structure that develops from the endoderm and the mesoderm. NMDCO_relaxed.owl UBERON:0000078 biolink:NamedThing mixed ectoderm/mesoderm/endoderm-derived structure An anatomical structure that develops from the ectoderm, mesoderm and endoderm. NMDCO_relaxed.owl UBERON:0000122 biolink:NamedThing neuron projection bundle A fasciculated bundle of neuron projections (GO:0043005), largely or completely lacking synapses. NMDCO_relaxed.owl UBERON:0000467 biolink:NamedThing anatomical system Multicellular, connected anatomical structure that has multiple organs as parts and whose parts work together to achieve some shared function. NMDCO_relaxed.owl UBERON:0000476 biolink:NamedThing acellular anatomical structure Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue. NMDCO_relaxed.owl UBERON:0003037 biolink:NamedThing septum A wall, dividing a cavity or structure into smaller ones[WP]. NMDCO_relaxed.owl UBERON:0003102 biolink:NamedThing surface structure Anatomical structure that overlaps the outer epithelial layer and is adjacent to the space surrounding the organism. NMDCO_relaxed.owl UBERON:0004119 biolink:NamedThing endoderm-derived structure An anatomical structure that develops (entirely or partially) from the endoderm. NMDCO_relaxed.owl UBERON:0004120 biolink:NamedThing mesoderm-derived structure An anatomical structure that develops (entirely or partially) from the mesoderm. NMDCO_relaxed.owl UBERON:0004121 biolink:NamedThing ectoderm-derived structure An anatomical structure that develops (entirely or partially) from the ectoderm. NMDCO_relaxed.owl UBERON:0004716 biolink:NamedThing conceptus The embryo and its adnexa (appendages or adjunct parts) or associated membranes (i.e. the products of conception) The conceptus includes all structures that develop from the zygote, both embryonic and extraembryonic. It includes the embryo as well as the embryonic part of the placenta and its associated membranes - amnion, chorion (gestational sac), and yolk sac[WP]. NMDCO_relaxed.owl UBERON:0005090 biolink:NamedThing muscle structure Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms[GO]. NMDCO_relaxed.owl UBERON:0005162 biolink:NamedThing multi cell part structure A structure consisting of multiple cell components but which is not itself a cell and does not have (complete) cells as a part. NMDCO_relaxed.owl UBERON:0005389 biolink:NamedThing transparent eye structure A transparent structure that is part of a visual sense organ, the function of which is to direct or focus light onto a photoreceptor array. NMDCO_relaxed.owl UBERON:0007651 biolink:NamedThing anatomical junction An anatomical structure that connects two structures. NMDCO_relaxed.owl UBERON:0009856 biolink:NamedThing sac NMDCO_relaxed.owl UBERON:0010000 biolink:NamedThing multicellular anatomical structure An anatomical structure that has more than one cell as a part. NMDCO_relaxed.owl UBERON:0010313 biolink:NamedThing neural crest-derived structure An anatomical structure that develops from the neural crest. NMDCO_relaxed.owl UBERON:0010314 biolink:NamedThing structure with developmental contribution from neural crest An anatomical structure that has some part that develops from the neural crest. NMDCO_relaxed.owl UBERON:0011585 biolink:NamedThing cell condensation Anatomical structure that is an aggregation of similar cells from which cartilages and bones form, and from which chondrogenesis and osteogenesis are initiated during repair and/or regeneration. (Hall and Miyake 1995). NMDCO_relaxed.owl UBERON:0014402 biolink:NamedThing sex-specific anatomical structure A part of the body present only in a specific gender. NMDCO_relaxed.owl UBERON:0015212 biolink:NamedThing lateral structure Any structure that is placed on one side of the left-right axis of a bilaterian. NMDCO_relaxed.owl UBERON:0018254 biolink:NamedThing skeletal musculature NMDCO_relaxed.owl UBERON:0034768 biolink:NamedThing morphological feature A part of an organism or organ that is continuous with its surroundings and distinguished from its surroundings based on morphology. NMDCO_relaxed.owl UBERON:0035118 biolink:NamedThing material entity in digestive tract Any material entity that is located in the digestive tract. This includes undigested food and liquid as well as unexcreted waste products. It also includes other entities such as ingested stones used to aid digestion. Any microbial cells or cell populations are also included. NMDCO_relaxed.owl CL:0000005 biolink:NamedThing fibroblast neural crest derived Any fibroblast that is deriived from the neural crest. NMDCO_relaxed.owl CL:0000057 biolink:NamedThing fibroblast A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. Flattened and irregular in outline with branching processes; appear fusiform or spindle-shaped. NMDCO_relaxed.owl CL:0002240 biolink:NamedThing marrow fibroblast A fibroblast in the bone marrow. NMDCO_relaxed.owl CL:0002363 biolink:NamedThing keratocyte A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate. NMDCO_relaxed.owl CL:0002548 biolink:NamedThing fibroblast of cardiac tissue A fibroblast that is part of the heart. NMDCO_relaxed.owl CL:0002553 biolink:NamedThing fibroblast of lung A fibroblast that is part of lung. NMDCO_relaxed.owl CL:0002557 biolink:NamedThing fibroblast of pulmonary artery A fibroblast of pulmonary artery. NMDCO_relaxed.owl CL:0002620 biolink:NamedThing skin fibroblast A fibroblast of skin. NMDCO_relaxed.owl CL:0009100 biolink:NamedThing hepatic portal fibroblast A fibroblast located in the portal triad. Hepatic portal fibroblast are a non-parenchymal cell population located adjacent to bile duct epithelia in liver and are distinct from stellate cells. They differentiate into fibrogenic myofibroblasts during chronic injury states producing high levels of collagen. NMDCO_relaxed.owl CL:0011021 biolink:NamedThing fibroblast of upper back skin A fibroblast that is part of upper back skin. NMDCO_relaxed.owl CL:0011022 biolink:NamedThing fibroblast of skin of back A fibroblast that is part of skin of back. NMDCO_relaxed.owl CL:0011027 biolink:NamedThing skeletal muscle fibroblast Any fibroblast that is part of skeletal muscle tissue. NMDCO_relaxed.owl CL:1000303 biolink:NamedThing fibroblast of areolar connective tissue A fibroblast that is part of the areolar connective tissue. NMDCO_relaxed.owl CL:1000306 biolink:NamedThing fibroblast of tunica adventitia of artery A fibroblast that is part of the tunica adventitia of artery. NMDCO_relaxed.owl CL:1000307 biolink:NamedThing fibroblast of dense regular elastic tissue A fibroblast that is part of the dense regular elastic tissue. NMDCO_relaxed.owl CL:1001609 biolink:NamedThing muscle fibroblast Fibroblast from muscle organ. NMDCO_relaxed.owl CL:2000042 biolink:NamedThing embryonic fibroblast Any fibroblast that is part of a embryo. NMDCO_relaxed.owl CL:2000051 biolink:NamedThing splenic fibroblast Any fibroblast that is part of a spleen. NMDCO_relaxed.owl CL:2000063 biolink:NamedThing ovarian fibroblast Any fibroblast that is part of a female gonad. NMDCO_relaxed.owl CL:2000066 biolink:NamedThing cardiac ventricle fibroblast Any fibroblast that is part of a cardiac ventricle. NMDCO_relaxed.owl CL:2000067 biolink:NamedThing cardiac atrium fibroblast Any fibroblast that is part of a cardiac atrium. NMDCO_relaxed.owl CL:2000068 biolink:NamedThing pericardium fibroblast Any fibroblast that is part of a pericardium. NMDCO_relaxed.owl CL:2000069 biolink:NamedThing gallbladder fibroblast Any fibroblast that is part of a gallbladder. NMDCO_relaxed.owl CL:2000070 biolink:NamedThing optic choroid fibroblast Any fibroblast that is part of a optic choroid. NMDCO_relaxed.owl CL:0000027 biolink:NamedThing smooth muscle cell neural crest derived A smooth muscle cell derived from the neural crest. NMDCO_relaxed.owl CL:0000029 biolink:NamedThing neural crest derived neuron NMDCO_relaxed.owl CL:0000333 biolink:NamedThing migratory neural crest cell A cell derived from the specialized ectoderm flanking each side of the embryonic neural plate, which after the closure of the neural tube, forms masses of cells that migrate out from the dorsal aspect of the neural tube to spread throughout the body. NMDCO_relaxed.owl CL:0000347 biolink:NamedThing scleral cell A cell of the sclera of the eye. NMDCO_relaxed.owl CL:0000348 biolink:NamedThing choroidal cell of the eye A structural cell that is part of optic choroid. NMDCO_relaxed.owl CL:0000575 biolink:NamedThing corneal epithelial cell An epithelial cell of the cornea. NMDCO_relaxed.owl CL:0002333 biolink:NamedThing neural crest derived adipocyte An adipocyte derived from a neural crest cell. NMDCO_relaxed.owl CL:0002676 biolink:NamedThing neural crest derived neuroblast A neuroblast derived from a neural crest cell. NMDCO_relaxed.owl UBERON:0000964 biolink:NamedThing cornea The transparent anterior portion of the fibrous coat of the eye that serves as the chief refractory structure. NMDCO_relaxed.owl UBERON:0001675 biolink:NamedThing trigeminal ganglion The cranial ganglion that is associated with and extends fibers into the trigeminal nerve. NMDCO_relaxed.owl UBERON:0001697 biolink:NamedThing orbit of skull Subdivision of skeleton that is an anterolateral part of the cranium and structurally supports the eye. Includes bones formed and located in sclerotic layer of eyeball. NMDCO_relaxed.owl UBERON:0001708 biolink:NamedThing jaw skeleton Subdivision of skeleton which includes upper and lower jaw skeletons. NMDCO_relaxed.owl UBERON:0001772 biolink:NamedThing corneal epithelium The smooth stratified squamous epithelium that covers the outer surface of the cornea. NMDCO_relaxed.owl UBERON:0001773 biolink:NamedThing sclera Opaque fibrous outer layer of the eyeball[ZFA,Kardong,WP]. NMDCO_relaxed.owl UBERON:0001777 biolink:NamedThing substantia propria of cornea The lamellated connective tissue of the cornea between the Bowman and Descemet membranes. NMDCO_relaxed.owl UBERON:0001806 biolink:NamedThing sympathetic ganglion A ganglion of the sympathetic nervous system. Examples: paravertebral and the prevertebral ganglia, which include the sympathetic chain ganglia, the superior, middle, and inferior cervical ganglia, and the aorticorenal, celiac, and stellate ganglia. NMDCO_relaxed.owl UBERON:0001985 biolink:NamedThing corneal endothelium A monolayer of specialized, flattened, mitochondria-rich cells that lines the posterior surface of the cornea and faces the anterior chamber of the eye[WP]. NMDCO_relaxed.owl UBERON:0002443 biolink:NamedThing choroidal blood vessel A blood vessel that is part of a choroid [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003277 biolink:NamedThing skeleton of upper jaw A subdivision of the skeleton that corresponds to the upper part of the mouth. The lower jaw skeleton includes the following elements, when present: upper jaw teeth, the maxilla and other lower jaw bones. NMDCO_relaxed.owl UBERON:0003278 biolink:NamedThing skeleton of lower jaw A subdivision of the skeleton that corresponds to the lower part of the mouth. The lower jaw skeleton includes the following elements, when present: lower jaw teeth, the mandible and other lower jaw bones, and Meckel's cartilage. NMDCO_relaxed.owl UBERON:0003462 biolink:NamedThing facial bone A bone that is part of a facial skeleton [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003500 biolink:NamedThing corneal blood vessel A blood vessel that is part of a cornea [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003501 biolink:NamedThing retina blood vessel A blood vessel that is part of a retina [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003511 biolink:NamedThing iris blood vessel A blood vessel that is part of a iris [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003585 biolink:NamedThing dermis connective tissue A portion of connective tissue that is part of a dermis [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003952 biolink:NamedThing anterior stroma of cornea The anterior segment of the lamellated connective tissue layer of the cornea. NMDCO_relaxed.owl UBERON:0003953 biolink:NamedThing posterior stroma of cornea The posterior segment of the lamellated connective tissue layer of the cornea. NMDCO_relaxed.owl UBERON:0004367 biolink:NamedThing Descemet's membrane A transparent homogeneous acellular layer found between the substantia propria and the endothelial layer of the cornea[MP]. NMDCO_relaxed.owl UBERON:0004370 biolink:NamedThing anterior limiting lamina of cornea A transparent homogeneous acellular layer, 6 to 9 um thick, lying between the basal lamina of the outer layer of stratified epithelium and the substantia propria of the cornea; it is considered to be a basement membrane. NMDCO_relaxed.owl UBERON:0004666 biolink:NamedThing interventricular septum membranous part The membranous portion of the wall between the two lower chambers of the heart. NMDCO_relaxed.owl UBERON:0005427 biolink:NamedThing corneal primordium Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea. NMDCO_relaxed.owl UBERON:0005446 biolink:NamedThing foramen rotundum The foramen rotundum is a circular hole in the sphenoid bone that connects the middle cranial fossa and the pterygopalatine fossa. NMDCO_relaxed.owl UBERON:0005989 biolink:NamedThing atrioventricular septum The wall of the heart that separates the right atrium and left ventricle; and is located just above the septal cusp of the tricuspid valve. NMDCO_relaxed.owl UBERON:0006207 biolink:NamedThing aortico-pulmonary spiral septum The spiral septum that separates the truncus arteriosus into a ventral pulmonary trunk and the dorsal aorta[MP]. The aorticopulmonary septum is developmentally formed from neural crest, specifically the cardiac neural crest, and actively separates the aorta and pulmonary arteries and fuses with the interventricular septum within the heart during development. The actual mechanism of septation of the outflow tract is poorly understood, but is recognized as a dynamic process with contributions from contractile, hemodynamic, and extracellular matrix interactions. NMDCO_relaxed.owl UBERON:0006271 biolink:NamedThing orbital fissure Either of two openings transmitting nerves and blood vessels to or from the orbit. NMDCO_relaxed.owl UBERON:0010291 biolink:NamedThing layer of sclera NMDCO_relaxed.owl UBERON:0010321 biolink:NamedThing skeletal element of eye region A skeletal element that is part of a orbital region. NMDCO_relaxed.owl UBERON:0011085 biolink:NamedThing palatoquadrate arch The dorsal portion of the first pharyngeal arch, comprising the upper jaw[ZFIN,VHOG]. NMDCO_relaxed.owl UBERON:0011156 biolink:NamedThing facial skeleton Subdivision of skull that consists of the facial bones. NMDCO_relaxed.owl UBERON:0011865 biolink:NamedThing corneal stroma collagen fibril The connective tissue bundles in the extracellular matrix of corneal stroma that are composed of collagen, and play a role in tissue strength and elasticity. NMDCO_relaxed.owl UBERON:0014387 biolink:NamedThing mesenchyme derived from neural crest Mesenchyme that develops_from the neural crest[Automatically generated definition]. NMDCO_relaxed.owl UBERON:0015060 biolink:NamedThing sphenoid endochondral element A sphenoid bone or its cartilage or pre-cartilage precursor. NMDCO_relaxed.owl UBERON:0018415 biolink:NamedThing ethmoid foramen An bone foramen in the ethmoid bone. NMDCO_relaxed.owl UBERON:0037089 biolink:NamedThing wall of orbit NMDCO_relaxed.owl CL:0000006 biolink:NamedThing neuronal receptor cell NMDCO_relaxed.owl CL:0000101 biolink:NamedThing sensory neuron Any neuron having a sensory function; an afferent neuron conveying sensory impulses. NMDCO_relaxed.owl CL:0009000 biolink:NamedThing sensory neuron of spinal nerve A sensory neuron of the spinal nerve that senses body position and sends information about how much the muscle is stretched to the spinal cord. NMDCO_relaxed.owl CL:3000004 biolink:NamedThing peripheral sensory neuron Peripheral sensory neuron. NMDCO_relaxed.owl CL:0000197 biolink:NamedThing sensory receptor cell A cell that is capable of detection of a stimulus involved in sensory perception. NMDCO_relaxed.owl CL:0000098 biolink:NamedThing sensory epithelial cell A specialized epithelial cell involved in sensory perception. Restricted to special sense organs of the olfactory, gustatory, and vestibulocochlear receptor systems; contain sensory cells surrounded by supportive, non-receptive cells. NMDCO_relaxed.owl CL:0000206 biolink:NamedThing chemoreceptor cell A cell specialized to detect chemical substances and relay that information centrally in the nervous system. Chemoreceptors may monitor external stimuli, as in taste and olfaction, or internal stimuli, such as the concentrations of oxygen and carbon dioxide in the blood. NMDCO_relaxed.owl CL:0000540 biolink:NamedThing neuron The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system. NMDCO_relaxed.owl CL:0000099 biolink:NamedThing interneuron Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions. NMDCO_relaxed.owl CL:0000107 biolink:NamedThing autonomic neuron A neuron whose cell body is within an autonomic ganglion. NMDCO_relaxed.owl CL:0000108 biolink:NamedThing cholinergic neuron A neuron that uses acetylcholine as a vesicular neurotransmitter. NMDCO_relaxed.owl CL:0000117 biolink:NamedThing CNS neuron (sensu Vertebrata) NMDCO_relaxed.owl CL:0000165 biolink:NamedThing neuroendocrine cell A neuron that is capable of some hormone secretion in response to neuronal signals. NMDCO_relaxed.owl CL:0000210 biolink:NamedThing photoreceptor cell A cell specialized to detect and transduce light. NMDCO_relaxed.owl CL:0000526 biolink:NamedThing afferent neuron A neuron which conveys sensory information centrally from the periphery. NMDCO_relaxed.owl CL:0000527 biolink:NamedThing efferent neuron A neuron which sends impulses peripherally to activate muscles or secretory cells. NMDCO_relaxed.owl CL:0000850 biolink:NamedThing serotonergic neuron A neuron that releases serotonin as a neurotransmitter. NMDCO_relaxed.owl CL:0008025 biolink:NamedThing noradrenergic neuron A neuron that release noradrenaline (noriphinephrine) as a neurotransmitter. NMDCO_relaxed.owl CL:0008028 biolink:NamedThing visual system neuron NMDCO_relaxed.owl CL:0010022 biolink:NamedThing cardiac neuron A neuron that has its soma in the heart. NMDCO_relaxed.owl CL:2000029 biolink:NamedThing central nervous system neuron Any neuron that is part of a central nervous system. NMDCO_relaxed.owl CL:2000032 biolink:NamedThing peripheral nervous system neuron A neuron that is part of a peripheral nervous system. NMDCO_relaxed.owl CL:4023079 biolink:NamedThing midbrain-derived inhibitory neuron A GABAergic inhibitory neuron that is derived from the midbrain. NMDCO_relaxed.owl CL:4023168 biolink:NamedThing somatosensory neuron A neuron that is part of the somatic sensory system. Somatosensory neurons innervate the skin or integument to detect different types of thermal, chemical, and mechanical touch stimuli. NMDCO_relaxed.owl CL:4033050 biolink:NamedThing catecholaminergic neuron A neuron that releases catecholamine as a neurotransmitter. NMDCO_relaxed.owl CL:0000007 biolink:NamedThing early embryonic cell (metazoa) A cell found in the embryo before the formation of all the gem layers is complete. NMDCO_relaxed.owl CL:0002321 biolink:NamedThing embryonic cell (metazoa) A cell of the embryo. NMDCO_relaxed.owl CL:0000221 biolink:NamedThing ectodermal cell A cell of the outer of the three germ layers of the embryo. NMDCO_relaxed.owl CL:0000222 biolink:NamedThing mesodermal cell A cell of the middle germ layer of the embryo. NMDCO_relaxed.owl CL:0000223 biolink:NamedThing endodermal cell A cell of the inner of the three germ layers of the embryo. NMDCO_relaxed.owl CL:0011012 biolink:NamedThing neural crest cell A cell of the neural crest. Neural crest cells are multipotent. Premigratory neural crest cells are found at the neural plate boarder, some of which will undergo ectomesynchymal transition and delamination to form migratory neural crest cells. NMDCO_relaxed.owl CL:0000008 biolink:NamedThing migratory cranial neural crest cell Cell that is part of the migratory cranial neural crest population. Migratory cranial neural crest cells develop from premigratory cranial neural crest cells and have undergone epithelial to mesenchymal transition and delamination. NMDCO_relaxed.owl CL:0000011 biolink:NamedThing migratory trunk neural crest cell Cell that is part of the migratory trunk neural crest population. Migratory trunk neural crest cells develop from premigratory trunk neural crest cells and have undergone epithelial to mesenchymal transition and delamination. NMDCO_relaxed.owl CL:2000073 biolink:NamedThing migratory cardiac neural crest cell Any migratory neural crest cell that is part of a cardiac neural crest. NMDCO_relaxed.owl CL:0000014 biolink:NamedThing germ line stem cell A stem cell that is the precursor of gametes. NMDCO_relaxed.owl CL:0000034 biolink:NamedThing stem cell A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. NMDCO_relaxed.owl CL:0000048 biolink:NamedThing multi fate stem cell A stem cell that can give rise to multiple lineages of cells. NMDCO_relaxed.owl CL:0000723 biolink:NamedThing somatic stem cell A stem cell that can give rise to cell types of the body other than those of the germ-line. NMDCO_relaxed.owl CL:0000039 biolink:NamedThing germ line cell A cell that is within the developmental lineage of gametes and is able to pass along its genetic material to offspring. NMDCO_relaxed.owl CL:0000586 biolink:NamedThing germ cell The reproductive cell in multicellular organisms. NMDCO_relaxed.owl CL:0000670 biolink:NamedThing primordial germ cell A primordial germ cell is a diploid germ cell precursors that transiently exist in the embryo before they enter into close association with the somatic cells of the gonad and become irreversibly committed as germ cells. NMDCO_relaxed.owl CL:0000021 biolink:NamedThing female germ cell Female germ cell is a germ cell that supports female gamete production. NMDCO_relaxed.owl CL:0000300 biolink:NamedThing gamete A mature sexual reproductive cell having a single set of unpaired chromosomes. NMDCO_relaxed.owl CL:0000022 biolink:NamedThing female germ line stem cell A stem cell that is the precursor of female gametes. NMDCO_relaxed.owl CL:0000023 biolink:NamedThing oocyte A female germ cell that has entered meiosis. NMDCO_relaxed.owl CL:0000024 biolink:NamedThing oogonial cell An undifferentiated germ cell that proliferates rapidly and gives rise to oocytes. NMDCO_relaxed.owl CL:0000675 biolink:NamedThing female gamete A mature sexual reproductive cell of the female germline. NMDCO_relaxed.owl CL:0000255 biolink:NamedThing eukaryotic cell NMDCO_relaxed.owl CL:0000031 biolink:NamedThing neuroblast (sensu Vertebrata) A cell that will develop into a neuron often after a migration phase. NMDCO_relaxed.owl CL:0000257 biolink:NamedThing Eumycetozoan cell NMDCO_relaxed.owl CL:0000365 biolink:NamedThing animal zygote Diploid cell produced by the fusion of sperm cell nucleus and egg cell. NMDCO_relaxed.owl CL:0000521 biolink:NamedThing fungal cell NMDCO_relaxed.owl CL:0000738 biolink:NamedThing leukocyte An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue. NMDCO_relaxed.owl CL:0000025 biolink:NamedThing egg cell A female gamete where meiosis has progressed to metaphase II and is able to participate in fertilization. NMDCO_relaxed.owl CL:0000192 biolink:NamedThing smooth muscle cell A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast). NMDCO_relaxed.owl CL:0000358 biolink:NamedThing sphincter associated smooth muscle cell A smooth muscle cell that is part of a sphincter. A sphincter is a typically circular muscle that normally maintains constriction of a natural body passage or orifice and which relaxes as required by normal physiological functioning. NMDCO_relaxed.owl CL:0000359 biolink:NamedThing vascular associated smooth muscle cell A smooth muscle cell associated with the vasculature. NMDCO_relaxed.owl CL:0002243 biolink:NamedThing smooth muscle cell of sphincter of pupil A circular smooth muscle cell of the iris, innervated by the ciliary nerves (parasympathetic), and acting to contract the pupil. This muscle cell derives from neuroectoderm. This smooth muscle cell results from transformation of epithelial cells to smooth muscle cells. NMDCO_relaxed.owl CL:0002504 biolink:NamedThing enteric smooth muscle cell A smooth muscle cell of the intestine. NMDCO_relaxed.owl CL:0002599 biolink:NamedThing smooth muscle cell of the esophagus A smooth muscle cell of the esophagus. NMDCO_relaxed.owl CL:0009052 biolink:NamedThing smooth muscle cell of anorectum A smooth muscle cell that is located in the anorectum. NMDCO_relaxed.owl CL:0019018 biolink:NamedThing blood vessel smooth muscle cell A smooth muscle cell that is part of any blood vessel. NMDCO_relaxed.owl CL:1000281 biolink:NamedThing smooth muscle cell of cecum A smooth muscle cell that is part of the cecum. NMDCO_relaxed.owl CL:1000286 biolink:NamedThing smooth muscle cell of rectum A smooth muscle cell that is part of the rectum. NMDCO_relaxed.owl CL:1000443 biolink:NamedThing ciliary muscle cell A smooth muscle cell that is part of the ciliary body. NMDCO_relaxed.owl CL:0000055 biolink:NamedThing non-terminally differentiated cell A precursor cell with a limited number of potential fates. NMDCO_relaxed.owl CL:0000058 biolink:NamedThing chondroblast Skeletogenic cell that is typically non-terminally differentiated, secretes an avascular, GAG rich matrix; is not buried in cartilage tissue matrix, retains the ability to divide, located adjacent to cartilage tissue (including within the perichondrium), and develops from prechondroblast (and thus prechondrogenic) cell. NMDCO_relaxed.owl CL:0000680 biolink:NamedThing muscle precursor cell A non-terminally differentiated cell that is capable of developing into a muscle cell. NMDCO_relaxed.owl CL:0007009 biolink:NamedThing prechondroblast Skeletogenic cell that has the potential to develop into a chondroblast; and arises from neural crest, meseosdermal and notochordal and connective tissue cells. NMDCO_relaxed.owl CL:0000035 biolink:NamedThing single fate stem cell A stem cell that self-renews as well as give rise to a single mature cell type. NMDCO_relaxed.owl CL:0000064 biolink:NamedThing ciliated cell A cell that has a filiform extrusion of the cell surface. NMDCO_relaxed.owl CL:0000066 biolink:NamedThing epithelial cell A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where apical part is directed towards the lumen and the basal part to the basal lamina. NMDCO_relaxed.owl CL:0000080 biolink:NamedThing circulating cell A cell which moves among different tissues of the body, via blood, lymph, or other medium. NMDCO_relaxed.owl CL:0000151 biolink:NamedThing secretory cell A cell that specializes in controlled release of one or more substances. NMDCO_relaxed.owl CL:0000163 biolink:NamedThing endocrine cell A cell of an endocrine gland, ductless glands that secrete substances which are released directly into the circulation and which influence metabolism and other body functions. NMDCO_relaxed.owl CL:0000183 biolink:NamedThing contractile cell A cell whose primary function is to shorten. NMDCO_relaxed.owl CL:0000188 biolink:NamedThing cell of skeletal muscle A somatic cell located in skeletal muscle. NMDCO_relaxed.owl CL:0000211 biolink:NamedThing electrically active cell A cell whose function is determined by the generation or the reception of an electric signal. NMDCO_relaxed.owl CL:0000215 biolink:NamedThing barrier cell A cell whose primary function is to prevent the transport of stuff across compartments. NMDCO_relaxed.owl CL:0000219 biolink:NamedThing motile cell A cell that moves by its own activities. NMDCO_relaxed.owl CL:0000225 biolink:NamedThing anucleate cell A cell that lacks a nucleus. NMDCO_relaxed.owl CL:0000226 biolink:NamedThing single nucleate cell A cell with a single nucleus. NMDCO_relaxed.owl CL:0000227 biolink:NamedThing binucleate cell NMDCO_relaxed.owl CL:0000228 biolink:NamedThing multinucleate cell A cell with more than one nucleus. NMDCO_relaxed.owl CL:0000293 biolink:NamedThing structural cell A cell whose primary function is to provide structural support, to provide strength and physical integrity to the organism. NMDCO_relaxed.owl CL:0000325 biolink:NamedThing stuff accumulating cell A cell that is specialised to accumulate a particular substance(s). NMDCO_relaxed.owl CL:0000329 biolink:NamedThing oxygen accumulating cell NMDCO_relaxed.owl CL:0000349 biolink:NamedThing extraembryonic cell NMDCO_relaxed.owl CL:0000412 biolink:NamedThing polyploid cell A cell that contains more than two haploid sets of chromosomes. NMDCO_relaxed.owl CL:0000413 biolink:NamedThing haploid cell A cell whose nucleus contains a single haploid genome. NMDCO_relaxed.owl CL:0000630 biolink:NamedThing supporting cell A cell whose primary function is to support other cell types. NMDCO_relaxed.owl CL:0000988 biolink:NamedThing hematopoietic cell A cell of a hematopoietic lineage. NMDCO_relaxed.owl CL:0001035 biolink:NamedThing bone cell A connective tissue cell found in bone. NMDCO_relaxed.owl CL:0002242 biolink:NamedThing nucleate cell A cell containing at least one nucleus. NMDCO_relaxed.owl CL:0002319 biolink:NamedThing neural cell A cell that is part of the nervous system. NMDCO_relaxed.owl CL:0002320 biolink:NamedThing connective tissue cell A cell of the supporting or framework tissue of the body, arising chiefly from the embryonic mesoderm and including adipose tissue, cartilage, and bone. NMDCO_relaxed.owl CL:0002494 biolink:NamedThing cardiocyte A cell located in the heart, including both muscle and non muscle cells. NMDCO_relaxed.owl CL:0007001 biolink:NamedThing skeletogenic cell Cell that has the potential to form a skeletal cell type (e.g. cells in periosteum, cells in marrow) and produce extracellular matrix (often mineralized) and skeletal tissue (often mineralized). NMDCO_relaxed.owl CL:0009001 biolink:NamedThing compound eye retinal cell Any cell in the compound eye, a light sensing organ composed of ommatidia. NMDCO_relaxed.owl CL:0010007 biolink:NamedThing His-Purkinje system cell NMDCO_relaxed.owl CL:0010017 biolink:NamedThing zygote A zygote in a plant or an animal. NMDCO_relaxed.owl CL:0011115 biolink:NamedThing precursor cell A cell that, by division or terminal differentiation, can give rise to other cell types. NMDCO_relaxed.owl CL:2000020 biolink:NamedThing inner cell mass cell Any native cell that is part of a inner cell mass. NMDCO_relaxed.owl CL:2000022 biolink:NamedThing cardiac septum cell Any native cell that is part of a cardiac septum. NMDCO_relaxed.owl CL:4023072 biolink:NamedThing brain vascular cell A cell that is part of the brain vasculature. NMDCO_relaxed.owl CL:4033054 biolink:NamedThing perivascular cell A cell that is adjacent to a vessel. A perivascular cell plays a crucial role in maintaining vascular function and tissue homeostasis. This cell type regulates vessel integrity and flow dynamics. NMDCO_relaxed.owl CL:0011026 biolink:NamedThing progenitor cell A precursor cell that has a tendency to differentiate into a specific type of cell. They are descendants of stem cells, only they are more constrained in their differentiation potential or capacity for self-renewal, and are often more limited in both senses. NMDCO_relaxed.owl CL:0000037 biolink:NamedThing hematopoietic stem cell A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. Hematopoietic stem cells lack cell markers of effector cells (lin-negative). Lin-negative is defined by lacking one or more of the following cell surface markers: CD2, CD3 epsilon, CD4, CD5 ,CD8 alpha chain, CD11b, CD14, CD19, CD20, CD56, ly6G, ter119. NMDCO_relaxed.owl CL:0000052 biolink:NamedThing totipotent stem cell A stem cell from which all cells of the body can form. NMDCO_relaxed.owl CL:1000428 biolink:NamedThing stem cell of epidermis A somatic stem cell that is part of the epidermis. NMDCO_relaxed.owl CL:0000081 biolink:NamedThing blood cell A cell found predominately in the blood. NMDCO_relaxed.owl CL:0000763 biolink:NamedThing myeloid cell A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage. NMDCO_relaxed.owl CL:0000837 biolink:NamedThing hematopoietic multipotent progenitor cell A hematopoietic multipotent progenitor cell is multipotent, but not capable of long-term self-renewal. These cells are characterized as lacking lineage cell surface markers and being CD34-positive in both mice and humans. NMDCO_relaxed.owl CL:0002031 biolink:NamedThing hematopoietic lineage restricted progenitor cell A hematopoietic progenitor cell that is capable of developing into only one lineage of hematopoietic cells. NMDCO_relaxed.owl CL:0002032 biolink:NamedThing hematopoietic oligopotent progenitor cell A hematopoietic oligopotent progenitor cell that has the ability to differentiate into limited cell types but lacks lineage cell markers and self renewal capabilities. NMDCO_relaxed.owl CL:0008001 biolink:NamedThing hematopoietic precursor cell Any hematopoietic cell that is a precursor of some other hematopoietic cell type. NMDCO_relaxed.owl CL:1001610 biolink:NamedThing bone marrow hematopoietic cell Hematopoietic cells resident in the bone marrow. Include: hematopoietic stem cells (lymphoid stem cells and myeloid stem cells) and the precursor cells for thrombocytes, erythrocytes, basophils, neutrophils, eosinophils, monocytes and lymphocytes. NMDCO_relaxed.owl CL:0000050 biolink:NamedThing megakaryocyte-erythroid progenitor cell A progenitor cell committed to the megakaryocyte and erythroid lineages. NMDCO_relaxed.owl CL:0000515 biolink:NamedThing skeletal muscle myoblast A myoblast that differentiates into skeletal muscle fibers. NMDCO_relaxed.owl CL:0000566 biolink:NamedThing angioblastic mesenchymal cell A mesenchymal stem cell capable of developing into blood vessel endothelium. NMDCO_relaxed.owl CL:0000765 biolink:NamedThing erythroblast A nucleated precursor of an erythrocyte that lacks hematopoietic lineage markers. NMDCO_relaxed.owl CL:0000839 biolink:NamedThing myeloid lineage restricted progenitor cell A progenitor cell restricted to the myeloid lineage. NMDCO_relaxed.owl CL:0002351 biolink:NamedThing progenitor cell of endocrine pancreas A progenitor cell that is able to differentiate into the pancreas alpha, beta and delta endocrine cells. This cell type expresses neurogenin-3 and Isl-1. NMDCO_relaxed.owl CL:0000038 biolink:NamedThing erythroid progenitor cell A progenitor cell committed to the erythroid lineage. NMDCO_relaxed.owl CL:0000764 biolink:NamedThing erythroid lineage cell A immature or mature cell in the lineage leading to and including erythrocytes. NMDCO_relaxed.owl CL:0000232 biolink:NamedThing erythrocyte A red blood cell. In mammals, mature erythrocytes are biconcave disks containing hemoglobin whose function is to transport oxygen. NMDCO_relaxed.owl CL:0000547 biolink:NamedThing proerythroblast An immature, nucleated erythrocyte occupying the stage of erythropoeisis that follows formation of erythroid progenitor cells. This cell is CD71-positive, has both a nucleus and a nucleolus, and lacks hematopoeitic lineage markers. NMDCO_relaxed.owl CL:0000558 biolink:NamedThing reticulocyte An immature erythrocyte that changes the protein composition of its plasma membrane by exosome formation and extrusion. The types of protein removed differ between species though removal of the transferrin receptor is apparent in mammals and birds. NMDCO_relaxed.owl CL:0000553 biolink:NamedThing megakaryocyte progenitor cell The earliest cytologically identifiable precursor in the thrombocytic series. This cell is capable of endomitosis and lacks expression of hematopoieitic lineage markers (lin-negative). NMDCO_relaxed.owl CL:0000049 biolink:NamedThing common myeloid progenitor A progenitor cell committed to myeloid lineage, including the megakaryocyte and erythroid lineages. NMDCO_relaxed.owl CL:0001060 biolink:NamedThing hematopoietic oligopotent progenitor cell, lineage-negative A hematopoietic oligopotent progenitor cell that has the ability to differentiate into limited cell types but lacks lineage cell markers and self renewal capabilities. Cell lacks hematopoeitic lineage markers. NMDCO_relaxed.owl CL:0000556 biolink:NamedThing megakaryocyte A large hematopoietic cell (50 to 100 micron) with a lobated nucleus. Once mature, this cell undergoes multiple rounds of endomitosis and cytoplasmic restructuring to allow platelet formation and release. NMDCO_relaxed.owl CL:0000766 biolink:NamedThing myeloid leukocyte A cell of the monocyte, granulocyte, or mast cell lineage. NMDCO_relaxed.owl CL:0000056 biolink:NamedThing myoblast A cell that is commited to differentiating into a muscle cell. Embryonic myoblasts develop from the mesoderm. They undergo proliferation, migrate to their various sites, and then differentiate into the appropriate form of myocytes. Myoblasts also occur as transient populations of cells in muscles undergoing repair. NMDCO_relaxed.owl CL:0000134 biolink:NamedThing mesenchymal stem cell A connective tissue cell that normally gives rise to other cells that are organized as three-dimensional masses. In humans, this cell type is CD73-positive, CD90-positive, CD105-positive, CD45-negative, CD34-negative, and MHCII-negative. They may further differentiate into osteoblasts, adipocytes, myocytes, neurons, or chondroblasts in vitro. Originally described as residing in the bone marrow, this cell type is now known to reside in many, if not all, adult organs. NMDCO_relaxed.owl CL:0000136 biolink:NamedThing adipocyte A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides. NMDCO_relaxed.owl CL:0000499 biolink:NamedThing stromal cell A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere. NMDCO_relaxed.owl CL:0002503 biolink:NamedThing adventitial cell A cell of the adventitial layer of ductal structures such as the uterer, defent duct, biliary duct, etc NMDCO_relaxed.owl CL:2000072 biolink:NamedThing adipose microvascular endothelial cell Any microvascular endothelial cell that is part of a adipose tissue. NMDCO_relaxed.owl CL:4033018 biolink:NamedThing lung megakaryocyte A megakaryocyte that is resident in the lung connective tissue. NMDCO_relaxed.owl CL:0000549 biolink:NamedThing basophilic erythroblast A nucleated immature erythrocyte, having cytoplasm generally similar to that of the earlier proerythroblast but sometimes even more basophilic, and usually regular in outline. The nucleus is still relatively large, but the chromatin strands are thicker and more deeply staining, giving a coarser appearance; the nucleoli have disappeared. This cell is CD71-positive and lacks hematopoeitic lineage markers. NMDCO_relaxed.owl CL:0000550 biolink:NamedThing polychromatophilic erythroblast A nucleated, immature erythrocyte in which the nucleus occupies a relatively smaller part of the cell than in its precursor, the basophilic erythroblast. The cytoplasm is beginning to acquire hemoglobin and thus is no longer a purely basophilic, but takes on acidophilic aspects, which becomes progressively more marked as the cell matures. The chromatin of the nucleus is arranged in coarse, deeply staining clumps. This cell is CD71-positive and lacks hematopoeitic lineage markers. NMDCO_relaxed.owl CL:0001066 biolink:NamedThing erythroid progenitor cell, mammalian A progenitor cell committed to the erythroid lineage. This cell is ter119-positive but lacks expression of other hematopoietic lineage markers (lin-negative). NMDCO_relaxed.owl GO:0005840 biolink:NamedThing ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. NMDCO_relaxed.owl GO:0005929 biolink:NamedThing cilium A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body. NMDCO_relaxed.owl GO:0032991 biolink:NamedThing protein-containing complex A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together. NMDCO_relaxed.owl GO:0098644 biolink:NamedThing complex of collagen trimers A complex of collagen trimers such as a fibril or collagen network. NMDCO_relaxed.owl PR:000000001 biolink:NamedThing protein An amino acid chain that is produced de novo by ribosome-mediated translation of a genetically-encoded mRNA, and any derivatives thereof. NMDCO_relaxed.owl UBERON:0000014 biolink:NamedThing zone of skin Any portion of the organ that covers that body and consists of a layer of epidermis and a layer of dermis. NMDCO_relaxed.owl UBERON:0000042 biolink:NamedThing serous membrane Multi-tissue structure that is comprised of a secretory epithelial layer (mesothelium) and a connective tissue layer. NMDCO_relaxed.owl UBERON:0000058 biolink:NamedThing duct A tubular structure that transports secreted or excreted substances. NMDCO_relaxed.owl UBERON:0000094 biolink:NamedThing membrane organ Nonparenchymatous organ that primarily consists of dense connective tissue organized into a sheet which interconnects two or more organs, separates two or more body spaces from one another, or surrounds an organ or body part. Examples: interosseous membrane of forearm, obturator membrane, tympanic membrane, fibrous pericardium, fascia lata, dura mater. [FMA]. NMDCO_relaxed.owl UBERON:0000117 biolink:NamedThing respiratory tube A tube in the respiratory system. Examples: bronchus, bronchiole, trachea. NMDCO_relaxed.owl UBERON:0000178 biolink:NamedThing blood A fluid that is composed of blood plasma and erythrocytes. NMDCO_relaxed.owl UBERON:0000304 biolink:NamedThing tendon sheath A layer of membrane around a tendon. It has 2 layers: synovial sheath + fibrous tendon sheath. NMDCO_relaxed.owl UBERON:0000344 biolink:NamedThing mucosa A lining of mostly endodermal origin, covered in epithelium, which is involved in absorption and secretion. They line various body cavities that are exposed to the external environment and internal organs. It is at several places continuous with skin: at the nostrils, the lips, the ears, the genital area, and the anus. The sticky, thick fluid secreted by the mucous membranes and gland is termed mucus. The term mucous membrane refers to where they are found in the body and not every mucous membrane secretes mucus[WP]. NMDCO_relaxed.owl UBERON:0000483 biolink:NamedThing epithelium Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium[CARO]. NMDCO_relaxed.owl UBERON:0001166 biolink:NamedThing pylorus The stomach tissue region surrounding and controlling the distal outlet of the stomach, which opens into the duodenum. NMDCO_relaxed.owl UBERON:0001173 biolink:NamedThing biliary tree A complex network of conduits that begins with the canals of Hering (intralobar bile duct) and progressively merges into a system of interlobular, septal, and major ducts which then coalesce to form the extrahepatic bile ducts, which finally deliver bile to the intestine, and in some species to the gallbladder. NMDCO_relaxed.owl UBERON:0001213 biolink:NamedThing intestinal villus The tiny hair-like projections that protrude from the inside of the small intestine that contain blood vessels that capture digested nutrients that are absorbed through the intestinal wall; the villi increase the absorptive surface area of the small intestine by approximately 30-fold. NMDCO_relaxed.owl UBERON:0001279 biolink:NamedThing portal triad A multi-organ-part structure that consists of three vessels of the portal lobule including the bile duct, a terminal branch of the hepatic artery and portal vein, and may also include a lymphatic vessel. NMDCO_relaxed.owl UBERON:0001804 biolink:NamedThing capsule of lens The elastic, clear, membrane-like structure, that is outer most layer of the lens. NMDCO_relaxed.owl UBERON:0001969 biolink:NamedThing blood plasma The liquid component of blood, in which erythrocytes are suspended. NMDCO_relaxed.owl UBERON:0001981 biolink:NamedThing blood vessel A vessel through which blood circulates in the body. NMDCO_relaxed.owl UBERON:0002067 biolink:NamedThing dermis The dermis is a layer of skin between the epidermis (with which it makes up the skin) and subcutaneous tissues, and is composed of two layers, the papillary and reticular dermis[WP]. NMDCO_relaxed.owl UBERON:0002072 biolink:NamedThing hypodermis Lowermost layer of the integumentary system in vertebrates. Types of cells that are found in the hypodermis are fibroblasts, adipose cells, and macrophages. It is derived from the mesoderm, but unlike the dermis, it is not derived from the dermatome region of the mesoderm. The hypodermis is used mainly for fat storage[WP]. NMDCO_relaxed.owl UBERON:0002097 biolink:NamedThing skin of body The organ covering the body that consists of the dermis and epidermis. NMDCO_relaxed.owl UBERON:0002199 biolink:NamedThing integument The dermis, epidermis and hypodermis. NMDCO_relaxed.owl UBERON:0002294 biolink:NamedThing biliary system Organ system subdivision that consists of the organs and ducts that are involved in the production and transportation of bile. In most species this is the gallbladder and the bile ducts (biliary tree). NMDCO_relaxed.owl UBERON:0002330 biolink:NamedThing exocrine system Anatomical system that consists of the glands and parts of glands that produce exocrine secretions and help to integrate and control bodily metabolic activity. Exocrine glands are glands that secrete their products (hormones) into ducts (duct glands). They are the counterparts to endocrine glands, which secrete their products (hormones) directly into the bloodstream (ductless glands) or release hormones (paracrines) that affect only target cells nearby the release site. [Wikipedia]. NMDCO_relaxed.owl UBERON:0002365 biolink:NamedThing exocrine gland A gland that secretes products (excluding hormones and other chemical messengers) into ducts (duct glands) which lead directly into the external environment[WP]. Typical exocrine glands include sweat glands, salivary glands, mammary glands, stomach, liver, pancreas. NMDCO_relaxed.owl UBERON:0002407 biolink:NamedThing pericardium The combination of pericardial sac (a double-walled sac containing the heart and the roots of the great vessels) plus fibrous pericardium. NMDCO_relaxed.owl UBERON:0002416 biolink:NamedThing integumental system Connected anatomical system that forms a barrier between an animal and its environment. In vertebrates, the integumental system consists of the epidermis, dermis plus associated glands and adnexa such as hair and scales. In invertebrates, the integumental system may include cuticle. NMDCO_relaxed.owl UBERON:0002423 biolink:NamedThing hepatobiliary system The part of the digestive system that contains the liver and the biliary system. NMDCO_relaxed.owl UBERON:0002523 biolink:NamedThing tunica intima The innermost layer of a blood vessel which is a lining of endothelial cells facing the lumen[Kardong]. NMDCO_relaxed.owl UBERON:0004535 biolink:NamedThing cardiovascular system Anatomical system that has as its parts the heart and blood vessels. NMDCO_relaxed.owl UBERON:0004537 biolink:NamedThing blood vasculature A vascular network consisting of blood vessels. NMDCO_relaxed.owl UBERON:0004572 biolink:NamedThing arterial system The part of the cardiovascular system consisting of all arteries. NMDCO_relaxed.owl UBERON:0004582 biolink:NamedThing venous system The part of the cardiovascular system consisting of all venous vessels. In vertebrates with a double circulation, this can be divided into systemic and pulmonary portions. NMDCO_relaxed.owl UBERON:0004708 biolink:NamedThing paired limb/fin An appendage that is part of an appendage girdle complex. NMDCO_relaxed.owl UBERON:0005734 biolink:NamedThing tunica adventitia of blood vessel The outermost layer of a blood vessel, composed mainly of fibrous tissue. NMDCO_relaxed.owl UBERON:0005769 biolink:NamedThing basement membrane of epithelium An acellular membrane that is part of the epithelium, lies adjacent to the epithelial cells, and is the fusion of the the basal lamina and the reticular lamina. NMDCO_relaxed.owl UBERON:0005906 biolink:NamedThing serous sac Organ with organ cavity, which has as parts a serous membrane and a serous cavity . Examples: pleural sac, pericardial sac, tendon sheath, bursa.[FMA]. NMDCO_relaxed.owl UBERON:0006965 biolink:NamedThing vascular cord The vascular cord is the primordial vasculature that will develop into blood vessels by the process of tubulogenesis[GO]. The vascular cord is composed of angioblast or vascular endothelial cells in a solid linear mass called a cord. The cord then undergoes tubulogenesis to form the lumen of the vessels[ZFA]. NMDCO_relaxed.owl UBERON:0007195 biolink:NamedThing stroma of bone marrow The stroma of the bone marrow is all tissue not directly involved in the primary function of hematopoiesis. The yellow bone marrow belongs here, and makes the majority of the bone marrow stroma, in addition to stromal cells located in the red bone marrow. Yellow bone marrow is found in the Medullary cavity. Still, the stroma is indirectly involved in hematopoiesis, since it provides the hematopoietic microenvironment that facilitates hematopoiesis by the parenchymal cells. For instance, they generate colony stimulating factors, affecting hematopoiesis. NMDCO_relaxed.owl UBERON:0007324 biolink:NamedThing pancreatic lobule A dense accumulation of exocrine glands in the pancreas often surrounding islets of Langerhans. NMDCO_relaxed.owl UBERON:0007845 biolink:NamedThing regular connective tissue Connective tissue, which consists of fibroblasts, the intercellular matrix of which contains a regular network of collagen and elastic fiber bundles. Examples: bone (tissue), cartilage (tissue), dense regular connective tissue. NMDCO_relaxed.owl UBERON:0008886 biolink:NamedThing pulmonary vascular system The part of the cardiovascular system consisting of all pulmonary arteries and all pulmonary veins. NMDCO_relaxed.owl UBERON:0010190 biolink:NamedThing pair of dorsal aortae The paired arterial structures of the embryo that supplies each developing somite via efferent segmental arteries; the dorsal aortae articulate with the umbilical arteries, which return mixed blood to the villi of the chorion for reoxygenation. NMDCO_relaxed.owl UBERON:0011234 biolink:NamedThing fibrous membrane of synovial tendon sheath NMDCO_relaxed.owl UBERON:0011823 biolink:NamedThing dense connective tissue Dense connective tissue is mainly composed of collagen type I. Crowded between the collagen fibers are rows of fibroblasts, fiber-forming cells, that manufacture the fibers. Dense connective tissue forms strong, rope-like structures such as tendons and ligaments. Tendons attach skeletal muscles to bones; ligaments connect bones to bones at joints. Ligaments are more stretchy and contain more elastic fibers than tendons. Dense connective tissue also make up the lower layers of the skin (dermis), where it is arranged in sheets. NMDCO_relaxed.owl UBERON:0011860 biolink:NamedThing collection of collagen fibrils NMDCO_relaxed.owl UBERON:0011953 biolink:NamedThing stomach glandular region A region of the stomach that is lined with glandular epithelium. NMDCO_relaxed.owl UBERON:0012430 biolink:NamedThing tunica fibrosa of eyeball The sclera and cornea form the fibrous tunic of the bulb of the eye; the sclera is opaque, and constitutes the posterior five-sixths of the tunic; the cornea is transparent, and forms the anterior sixth. NMDCO_relaxed.owl UBERON:0034929 biolink:NamedThing external soft tissue zone A region or zone on the surface of an organism that encompasses skin and any adnexa, down through muscles and bounded by underlying skeletal support structures. NMDCO_relaxed.owl CL:0000067 biolink:NamedThing ciliated epithelial cell An epithelial cell that has a cilia. NMDCO_relaxed.owl CL:1000271 biolink:NamedThing lung ciliated cell NMDCO_relaxed.owl CL:4030034 biolink:NamedThing respiratory ciliated cell A ciliated cell of the respiratory system. Ciliated cells are present in airway epithelium. NMDCO_relaxed.owl CL:0000068 biolink:NamedThing duct epithelial cell An epithelial cell that is part of a duct. NMDCO_relaxed.owl CL:0000075 biolink:NamedThing columnar/cuboidal epithelial cell A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. NMDCO_relaxed.owl CL:0000076 biolink:NamedThing squamous epithelial cell NMDCO_relaxed.owl CL:0000082 biolink:NamedThing epithelial cell of lung An epithelial cell of the lung. NMDCO_relaxed.owl CL:0000083 biolink:NamedThing epithelial cell of pancreas An epithelial cell of the pancreas. NMDCO_relaxed.owl CL:0000150 biolink:NamedThing glandular epithelial cell A specialized epithelial cell that is capable of synthesizing and secreting certain biomolecules. NMDCO_relaxed.owl CL:0000182 biolink:NamedThing hepatocyte The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules. Majority of cell population of liver, polygonal in shape, arranged in plates or trabeculae between sinusoids; may have single nucleus or binucleated. NMDCO_relaxed.owl CL:0000362 biolink:NamedThing epidermal cell An epithelial cell of the integument (the outer layer of an organism). NMDCO_relaxed.owl CL:0002076 biolink:NamedThing endo-epithelial cell An epithelial cell derived from endoderm. NMDCO_relaxed.owl CL:0002077 biolink:NamedThing ecto-epithelial cell An epithelial cell derived from ectoderm. NMDCO_relaxed.owl CL:0002078 biolink:NamedThing meso-epithelial cell Epithelial cell derived from mesoderm or mesenchyme. NMDCO_relaxed.owl CL:0002178 biolink:NamedThing epithelial cell of stomach An epithelial cell found in the lining of the stomach. NMDCO_relaxed.owl CL:0002222 biolink:NamedThing vertebrate lens cell A cell comprising the transparent, biconvex body separating the posterior chamber and vitreous body, and constituting part of the refracting mechanism of the mammalian eye. NMDCO_relaxed.owl CL:0002251 biolink:NamedThing epithelial cell of alimentary canal An epithelial cell of the musculomembranous digestive tube extending from the mouth to the anus. NMDCO_relaxed.owl CL:0002252 biolink:NamedThing epithelial cell of esophagus An epithelial cell of the esophagus. NMDCO_relaxed.owl CL:0002308 biolink:NamedThing epithelial cell of skin gland An epithelial cell of a skin gland. NMDCO_relaxed.owl CL:0002563 biolink:NamedThing intestinal epithelial cell An epithelial cell of the intestine. NMDCO_relaxed.owl CL:0011108 biolink:NamedThing colon epithelial cell Epithelial cell that is part of the colon epithelium. NMDCO_relaxed.owl CL:1000415 biolink:NamedThing epithelial cell of gallbladder An epithelial cell that is part of the gallbladder. NMDCO_relaxed.owl CL:1001433 biolink:NamedThing epithelial cell of exocrine pancreas An epithelial cell of the exocrine pancreas. NMDCO_relaxed.owl CL:2000064 biolink:NamedThing ovarian surface epithelial cell Any epithelial cell that is part of a female gonad. NMDCO_relaxed.owl CL:0000069 biolink:NamedThing branched duct epithelial cell NMDCO_relaxed.owl CL:0000071 biolink:NamedThing blood vessel endothelial cell An endothelial cell that lines the vasculature. NMDCO_relaxed.owl CL:0000077 biolink:NamedThing mesothelial cell A flattened epithelial cell of mesenchymal origin that lines the serous cavity. NMDCO_relaxed.owl CL:1001576 biolink:NamedThing oral mucosa squamous cell Squamous cell of oral epithelium. NMDCO_relaxed.owl CL:0002139 biolink:NamedThing endothelial cell of vascular tree An endothelial cell of the vascular tree, which includes blood vessels and lymphatic vessels. NMDCO_relaxed.owl CL:1000414 biolink:NamedThing endothelial cell of venule An endothelial cell that is part of the venule. NMDCO_relaxed.owl CL:1001567 biolink:NamedThing lung endothelial cell NMDCO_relaxed.owl CL:1001568 biolink:NamedThing pulmonary artery endothelial cell NMDCO_relaxed.owl CL:0000213 biolink:NamedThing lining cell A cell within an epithelial cell sheet whose main function is to act as an internal or external covering for a tissue or an organism. NMDCO_relaxed.owl CL:0000115 biolink:NamedThing endothelial cell An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. In mammals, endothelial cell has vimentin filaments and is derived from the mesoderm. NMDCO_relaxed.owl CL:0000214 biolink:NamedThing synovial cell A cell located in the synovial joint. NMDCO_relaxed.owl CL:0002195 biolink:NamedThing hepatic stem cell A stem cell that can give rise to the cells of the liver. The term usually refers to the self-renewing pool of hepatocyte precursors in the adult liver (differently from 'hepatoblast', often used for fetal precursors of hepatocytes). NMDCO_relaxed.owl CL:1000272 biolink:NamedThing lung secretory cell NMDCO_relaxed.owl CL:1000488 biolink:NamedThing cholangiocyte An epithelial cell that is part of the bile duct. Cholangiocytes contribute to bile secretion via net release of bicarbonate and water. They are cuboidal epithelium in the small interlobular bile ducts, but become columnar and mucus secreting in larger bile ducts approaching the porta hepatis and the extrahepatic ducts. NMDCO_relaxed.owl UBERON:0000006 biolink:NamedThing islet of Langerhans The clusters of hormone-producing cells that are scattered throughout the pancreas. NMDCO_relaxed.owl UBERON:0000016 biolink:NamedThing endocrine pancreas The part of the pancreas that is part of the endocrine system and is made up of islet cells, which produce insulin, glucagon and somatostatin. NMDCO_relaxed.owl UBERON:0000017 biolink:NamedThing exocrine pancreas The part of the pancreas that is part of the exocrine system and which produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells [GO]. NMDCO_relaxed.owl UBERON:0000065 biolink:NamedThing respiratory tract Anatomical structure that is part of the respiratory system. In mammals consists of upper and lower tracts. NMDCO_relaxed.owl UBERON:0000072 biolink:NamedThing proximo-distal subdivision of respiratory tract An section of a respiratory tract. NMDCO_relaxed.owl UBERON:0000101 biolink:NamedThing lobe of lung A lung lobe is one of the rounded projections that compose the lung[GO]. NMDCO_relaxed.owl UBERON:0001113 biolink:NamedThing lobe of liver Traditional gross anatomy divided the liver into four lobes based on surface features. The falciform ligament is visible on the front (anterior side) of the liver. This divides the liver into a left anatomical lobe, and a right anatomical lobe. NMDCO_relaxed.owl UBERON:0001171 biolink:NamedThing portal lobule The triangular region on the periphery of the liver lobules that contain a bile duct and a terminal branch of the hepatic artery and portal vein, and may also include a lymphatic vessel. NMDCO_relaxed.owl UBERON:0001172 biolink:NamedThing hepatic acinus The functional unit of the liver, consisting of a mass of hepatocytes from adjacent liver lobules aligned around the hepatic arterioles and portal venules just as they anastomose into sinusoids. NMDCO_relaxed.owl UBERON:0001263 biolink:NamedThing pancreatic acinus The secretory units of the exocrine pancreas, where fluid containing digestive enzymes is produced; consists of a group of secretory cells surrounding a luminal space that connects to the pancreatic duct. NMDCO_relaxed.owl UBERON:0001280 biolink:NamedThing liver parenchyma The functional units of the liver including the lobules. NMDCO_relaxed.owl UBERON:0002048 biolink:NamedThing lung Respiration organ that develops as an outpocketing of the esophagus. NMDCO_relaxed.owl UBERON:0002107 biolink:NamedThing liver An exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes[GO]. NMDCO_relaxed.owl UBERON:0002110 biolink:NamedThing gallbladder An organ that aids digestion and stores bile produced by the liver[WP]. NMDCO_relaxed.owl UBERON:0002394 biolink:NamedThing bile duct Any of the ducts that form the biliary tree, carrying bile from the liver to the small intestine. NMDCO_relaxed.owl UBERON:0003580 biolink:NamedThing lower respiratory tract connective tissue A portion of connective tissue that is part of a lower respiratory tract [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003603 biolink:NamedThing lower respiratory tract cartilage A cartilage that is part of a lower respiratory tract [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004058 biolink:NamedThing biliary ductule One of the fine terminal elements of the bile duct system, leaving the portal canal, and pursuing a course at the periphery of a lobule of the liver[BTO]. the excretory ducts of the liver that connect the interlobular ductules to the right or left hepatic duct[MP]. NMDCO_relaxed.owl UBERON:0004185 biolink:NamedThing endodermal part of digestive tract A portions of the gut that is derived from endoderm. NMDCO_relaxed.owl UBERON:0004647 biolink:NamedThing liver lobule The polygonal structure of the liver that consists of hepatocytes radiating outward from a hepatic vein. NMDCO_relaxed.owl UBERON:0004781 biolink:NamedThing gallbladder lamina propria A lamina propria that is part of a gallbladder [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004915 biolink:NamedThing sphincter of hepatopancreatic ampulla Muscular valve that controls the flow of digestive juices (bile and pancreatic juice) through the ampulla of Vater into the second part of the duodenum. Relaxed by the hormone Cholecystokinin (CCK) via vasoactive intestinal polypeptide (VIP).[WP]. NMDCO_relaxed.owl UBERON:0004938 biolink:NamedThing submucosa of biliary tree A submucosa that is part of a biliary tree [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004999 biolink:NamedThing mucosa of biliary tree A mucosa that is part of a biliary tree [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005033 biolink:NamedThing mucosa of gallbladder A mucosa that is part of a gallbladder [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005911 biolink:NamedThing endo-epithelium Epithelium that derives from the endoderm. Examples: urothelium, transitional epithelium of ureter, epithelium of prostatic gland.[FMA]. NMDCO_relaxed.owl UBERON:0007329 biolink:NamedThing pancreatic duct A duct that collects and carries secretions of the exocrine pancreas to the intestine. NMDCO_relaxed.owl UBERON:0008946 biolink:NamedThing lung parenchyma A parenchyma that is part of a lung. NMDCO_relaxed.owl UBERON:0009708 biolink:NamedThing dorsal pancreas NMDCO_relaxed.owl UBERON:0009709 biolink:NamedThing ventral pancreas NMDCO_relaxed.owl UBERON:0009778 biolink:NamedThing pleural sac A serous sac that has the pleura and the pleural cavity as parts. NMDCO_relaxed.owl UBERON:0010183 biolink:NamedThing liver trabecula A trabecula that is part of a liver. NMDCO_relaxed.owl UBERON:0010368 biolink:NamedThing pulmonary lobule The smallest anatomical unit of the lung, measuring 0.50 to 2.00 cm in diameter. Each lobule is composed of 4-8 terminal bronchioles and their distal alveolar ducts and sacs. The lobules are separated by fibrous interlobular septa. NMDCO_relaxed.owl UBERON:0011862 biolink:NamedThing pulmonary collagen fibril The connective tissue bundles in the extracellular matrix of pulmonary tissue that are composed of collagen, and play a role in tissue strength and elasticity. NMDCO_relaxed.owl UBERON:0016478 biolink:NamedThing liver stroma A stroma that is part of a liver. NMDCO_relaxed.owl UBERON:0019190 biolink:NamedThing mucous gland of lung NMDCO_relaxed.owl UBERON:0022361 biolink:NamedThing lung field A specific region of the foregut into the area in which the lung will develop. NMDCO_relaxed.owl UBERON:0036343 biolink:NamedThing wall of gallbladder NMDCO_relaxed.owl UBERON:8400023 biolink:NamedThing liver subserosa Subserosal tissue of liver. A zone of areolar connective tissue lying beneath the serous coat of the liver and distinguished with difficulty from the fibrous capsule of Glisson. NMDCO_relaxed.owl UBERON:8410077 biolink:NamedThing airway submucosal gland A submucosal gland found in a respiratory tract. NMDCO_relaxed.owl UBERON:8600017 biolink:NamedThing bronchopulmonary segment A discrete anatomical unit of the lung that is composed of a segmental bronchus and the lung tissue supplied by that bronchus. A bronchopulmonary segment exhibits a pyramidal shape, with its apex pointing towards the center of the lung and its base toward the pleural surface. NMDCO_relaxed.owl CL:0000095 biolink:NamedThing neuron associated cell NMDCO_relaxed.owl CL:0002590 biolink:NamedThing smooth muscle cell of the brain vasculature A vascular associated smooth muscle cell of the brain vasculature. NMDCO_relaxed.owl CL:0009004 biolink:NamedThing retinal cell Any cell in the retina, the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. NMDCO_relaxed.owl CL:2000044 biolink:NamedThing brain microvascular endothelial cell Any microvascular endothelial cell that is part of a brain. NMDCO_relaxed.owl CL:0002585 biolink:NamedThing retinal blood vessel endothelial cell A blood vessel endothelial cell that is part of the retina. NMDCO_relaxed.owl CL:0002672 biolink:NamedThing retinal progenitor cell A multi-fate stem cell that can give rise to different retinal cell types including rod and cone cells. NMDCO_relaxed.owl CL:0007004 biolink:NamedThing premigratory neural crest cell Cell that is part of the neural crest region of the neuroepithelium, prior to migration. Note that not all premigratory neural crest cells may become migratory neural crest cells. NMDCO_relaxed.owl CL:0010009 biolink:NamedThing camera-type eye photoreceptor cell NMDCO_relaxed.owl CL:1000444 biolink:NamedThing mesothelial cell of anterior chamber of eye A mesothelial cell that is part of the anterior chamber of eyeball. NMDCO_relaxed.owl CL:2000010 biolink:NamedThing dermis blood vessel endothelial cell Any blood vessel endothelial cell that is part of a dermis. NMDCO_relaxed.owl GO:0097386 biolink:NamedThing glial cell projection A prolongation or process extending from a glial cell. NMDCO_relaxed.owl UBERON:0000019 biolink:NamedThing camera-type eye An organ of sight that includes the camera-type eyeball and supporting structures such as the lacrimal apparatus, the conjunctiva, the eyelid. NMDCO_relaxed.owl UBERON:0000022 biolink:NamedThing feather One of the epidermal growths that form the distinctive outer covering, or plumage, on birds. Feathers are formed in tiny follicles in the epidermis, or outer skin layer, that produce keratin proteins. NMDCO_relaxed.owl UBERON:0000095 biolink:NamedThing cardiac neural crest Portion of neural crest that develops from the dorsal neural tube. It overlaps the vagal neural crest and migrates to populate the pharyngeal arches 3, 4 and 6 (producing structures in the head) and to the heart, forming connective tissue that separates the great vessels of the heart. [Wikipedia]. NMDCO_relaxed.owl UBERON:0000159 biolink:NamedThing anal canal The terminal part of the large intestine, continuous proximally with the rectum and distally terminates with the anus. NMDCO_relaxed.owl UBERON:0000349 biolink:NamedThing limbic system A set of midline structures surrounding the brainstem of the mammalian brain, originally described anatomically, e.g., hippocampal formation, amygdala, hypothalamus, cingulate cortex. Although the original designation was anatomical, the limbic system has come to be associated with the system in the brain subserving emotional functions. As such, it is very poorly defined and doesn't correspond closely to the anatomical meaning any longer. [BirnLex]. NMDCO_relaxed.owl UBERON:0000389 biolink:NamedThing lens cortex Tissue that surrounds the lens nucleus. NMDCO_relaxed.owl UBERON:0000390 biolink:NamedThing lens nucleus The core of the crystalline lens, surrounded by the cortex. NMDCO_relaxed.owl UBERON:0000955 biolink:NamedThing brain The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP]. NMDCO_relaxed.owl UBERON:0000965 biolink:NamedThing lens of camera-type eye A transparent and refractive lens located posterior to the iris. The lens of camera-type eye refracts light to be focused on the retina.|Transparent part of camera-type eye that helps to refract light to be focused on the retina. NMDCO_relaxed.owl UBERON:0000966 biolink:NamedThing retina The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. NMDCO_relaxed.owl UBERON:0001017 biolink:NamedThing central nervous system The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. NMDCO_relaxed.owl UBERON:0001245 biolink:NamedThing anus Orifice at the opposite end of an animal's digestive tract from the mouth. Its function is to expel feces, unwanted semi-solid matter produced during digestion, which, depending on the type of animal, may be one or more of: matter which the animal cannot digest, such as bones; food material after all the nutrients have been extracted, for example cellulose or lignin; ingested matter which would be toxic if it remained in the digestive tract; and dead or excess gut bacteria and other endosymbionts. NMDCO_relaxed.owl UBERON:0001768 biolink:NamedThing uvea The pigmented middle of the three concentric layers that make up an eye, consisting of the iris, ciliary body and choroid[WP,edited]. NMDCO_relaxed.owl UBERON:0001769 biolink:NamedThing iris The adjustable membrane, composed of the stroma and pigmented epithelium, located just in front of the crystalline lens within the eye. NMDCO_relaxed.owl UBERON:0001775 biolink:NamedThing ciliary body The thickened portion of the vascular tunic, which lies between the choroid and the iris, composed of ciliary muscle and ciliary processes. NMDCO_relaxed.owl UBERON:0001779 biolink:NamedThing iris stroma The delicate vascular connective tissue that lies between the anterior surface of the iris and the pars iridica retinae. NMDCO_relaxed.owl UBERON:0001781 biolink:NamedThing layer of retina Any of the layers that make up the retina[MP]. NMDCO_relaxed.owl UBERON:0001798 biolink:NamedThing vitreous body Gelatinous mucoid tissue that is composed of vitreous humor and fills the cavity behind the crystalline lens of the eye and in front of the retina[MP,modified]. NMDCO_relaxed.owl UBERON:0001801 biolink:NamedThing anterior segment of eyeball Any of the parts of the eye that lie in front of, or ventral to, the lens (inclusive). NMDCO_relaxed.owl UBERON:0001802 biolink:NamedThing posterior segment of eyeball Any of the parts of the eye that lie in back of, or dorsal to, the lens (but not inclusive). NMDCO_relaxed.owl UBERON:0001896 biolink:NamedThing medulla oblongata Organ component of neuraxis that has as its parts the medullary reticular formation, inferior olivary complex and cochlear nuclear complex, among other structures[FMA]. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate[GO]. NMDCO_relaxed.owl UBERON:0001948 biolink:NamedThing regional part of spinal cord A multi-tissue structure that is part of a spinal cord. NMDCO_relaxed.owl UBERON:0002240 biolink:NamedThing spinal cord Part of the central nervous system located in the vertebral canal continuous with and caudal to the brain; demarcated from brain by plane of foramen magnum. It is composed of an inner core of gray matter in which nerve cells predominate, and an outer layer of white matter in which myelinated nerve fibers predominate, and surrounds the central canal. (CUMBO). NMDCO_relaxed.owl UBERON:0002271 biolink:NamedThing periventricular zone of hypothalamus NMDCO_relaxed.owl UBERON:0002328 biolink:NamedThing notochord A flexible rod-shaped body found in embryos of all chordates. It is composed of cells derived from the mesoderm and defines the primitive axis of the embryo. In some chordates, it persists throughout life as the main axial support of the body, while in most vertebrates it becomes the nucleus pulposus of the intervertebral disc. The notochord is found ventral to the neural tube. NMDCO_relaxed.owl UBERON:0002342 biolink:NamedThing neural crest A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP]. NMDCO_relaxed.owl UBERON:0002346 biolink:NamedThing neurectoderm Embryonic ectoderm that gives rise to nervous tissue. NMDCO_relaxed.owl UBERON:0002419 biolink:NamedThing skin gland A gland that is part of a skin of body [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0002616 biolink:NamedThing regional part of brain Anatomical divisons of the brain according to one or more criteria, e.g. cytoarchitectural, gross anatomy. Parts may be contiguous in 3D or not, e.g., basal ganglia. NMDCO_relaxed.owl UBERON:0003023 biolink:NamedThing pontine tegmentum Dorsal portion of the pons, containing cranial nervee nuclei, ascending and descending tracts and reticular nuclei. It is continuous with the reticular formation of the medulla (Carpenter, A Core Text of Neuroanatomy, 3rd ed, 1985, pg 133). NMDCO_relaxed.owl UBERON:0003052 biolink:NamedThing midbrain-hindbrain boundary The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate. NMDCO_relaxed.owl UBERON:0003056 biolink:NamedThing pre-chordal neural plate The portion of neural plate anterior to the mid-hindbrain junction. NMDCO_relaxed.owl UBERON:0003072 biolink:NamedThing optic cup Multi-tissue structure that is comprised of neural and non-neural epithelial layers which will form the retina and retinal pigmented epithelium of the mature eye[ZFA]. double walled structured formed by expansion and invagination of the distal end of the optic vesicle that develops into the pigmented and sensory layers of the retina while the mouth of the optic cup eventually forms the pupil of the eye[MP]. NMDCO_relaxed.owl UBERON:0003083 biolink:NamedThing trunk neural crest Trunk portion of the neural crest. The trunk neural crest lies between the vagal and sacral neural crest and gives rise to two groups of cells. One group migrates dorsolateral and populates the skin, forming pigment cells and the other migrates ventrolateral through the anterior sclerotome to become the epinephrine-producing cells of the adrenal gland and the neurons of the sympathetic nervous system. Some cells remain in the sclerotome to form the dorsal root ganglia [Wikipedia]. NMDCO_relaxed.owl UBERON:0003099 biolink:NamedThing cranial neural crest Neural crest cells (NCCs) originating in the anterior part of the developing embryo and residing between the mid-diencephalon and the forming hindbrain; cranial NCCs migrate dorsolaterally to form the craniofacial mesenchyme that differentiates into various craniofacial cartilages and bones, cranial neurons, glia, and connective tissues of the face; these cells enter the pharyngeal pouches and arches where they give rise to thymic cells, bones of the middle ear and jaw (mandible), and the odontoblasts of the tooth primordia; like their counterparts in the trunk, cranial NCCs also contribute to the developing peripheral nervous system, along with the pigmented cell (i.e. melanocyte) lineage. NMDCO_relaxed.owl UBERON:0003269 biolink:NamedThing skeletal muscle tissue of eye A portion of skeletal muscle tissue that is part of a eye [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003329 biolink:NamedThing submucosa of anal canal A submucosa that is part of an anal canal [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003339 biolink:NamedThing ganglion of central nervous system A ganglion that is part of a central nervous system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003342 biolink:NamedThing mucosa of anal canal A mucosa that is part of an anal canal [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003386 biolink:NamedThing smooth muscle of eye Any of the striated muscles that move the eye and include: superior rectus, inferior rectus, medial rectus, lateral rectus, superior oblique, inferior oblique, retractor bulbi. NMDCO_relaxed.owl UBERON:0003499 biolink:NamedThing brain blood vessel A blood vessel that is part of a brain [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003947 biolink:NamedThing brain ventricle/choroid plexus The brain ventricles or their associated choroid plexuses. NMDCO_relaxed.owl UBERON:0003967 biolink:NamedThing cutaneous elastic tissue The slender connective tissue fiber in the extracellular matrix of skin tissue that is composed of microfibrils and amorphous elastin and is characterized by great elasticity. NMDCO_relaxed.owl UBERON:0004062 biolink:NamedThing neural tube marginal layer The outermost layer of the neural tube that consists of axons from the developing mantle layer and will form the white matter. NMDCO_relaxed.owl UBERON:0004064 biolink:NamedThing neural tube basal plate The region of the mantle layer of the neural tube that lies ventral to the sulcus limitans and contains primarily motor neurons and interneurons. NMDCO_relaxed.owl UBERON:0004128 biolink:NamedThing optic vesicle The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup[GO]. Portion of tissue that is comprised of neuroepitheium which has pinched off from the anterior neural keel and will form the optic cup[ZFA]. NMDCO_relaxed.owl UBERON:0004277 biolink:NamedThing eye muscle A muscle that is part of the eye region. NMDCO_relaxed.owl UBERON:0004731 biolink:NamedThing neuromere A transverse unitary subdivision of the neural tube that shares a common dorsoventral structure (floor, basal, alar, and roof plates), but each having differential molecular identities and fates; they comprise the secondary prosencephalon, diencephalon (prosomeres), the midbrain (mesomeres), and the hindbrain (rhombomeres). NMDCO_relaxed.owl UBERON:0004733 biolink:NamedThing segmental subdivision of hindbrain An organ subunit that is part of a hindbrain [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004756 biolink:NamedThing dermal skeletal element Dermis-derived entity that is made of skeletal tissue. NMDCO_relaxed.owl UBERON:0004760 biolink:NamedThing gland of anal canal A gland that is part of an anal canal [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004906 biolink:NamedThing ectodermal part of digestive tract A portion of the gut that is derived from ectoderm. NMDCO_relaxed.owl UBERON:0005076 biolink:NamedThing hindbrain-spinal cord boundary An anatomical boundary that adjacent_to a hindbrain and adjacent_to a spinal cord. NMDCO_relaxed.owl UBERON:0005158 biolink:NamedThing parenchyma of central nervous system The functional tissue of the central nervous system consisting of neurons and glial cells. NMDCO_relaxed.owl UBERON:0005281 biolink:NamedThing ventricular system of central nervous system A set of structures containing cerebrospinal fluid in the brain. It is continuous with the central canal of the spinal cord[WP]. NMDCO_relaxed.owl UBERON:0005282 biolink:NamedThing ventricular system of brain NMDCO_relaxed.owl UBERON:0005289 biolink:NamedThing tela choroidea of telencephalic ventricle Tela chorioidea that lines the telencephalic ventricle. NMDCO_relaxed.owl UBERON:0005426 biolink:NamedThing lens vesicle Portion of tissue that gives rise to the lens. NMDCO_relaxed.owl UBERON:0005428 biolink:NamedThing vagal neural crest Vagal neural crest is adjacent to the first seven somites gives rise to both ganglionic and ectomesenchymal derivatives[ZFA]. NMDCO_relaxed.owl UBERON:0005496 biolink:NamedThing neural tube lateral wall Portion of tissue on the side of the lumen of the neural tube. NMDCO_relaxed.owl UBERON:0005497 biolink:NamedThing non-neural ectoderm NMDCO_relaxed.owl UBERON:0005711 biolink:NamedThing foregut duodenum mesentery A mesentery of duodenum that is part of a foregut. NMDCO_relaxed.owl UBERON:0005712 biolink:NamedThing midgut duodenum mesentery A mesentery of duodenum that is part of a midgut. NMDCO_relaxed.owl UBERON:0005720 biolink:NamedThing hindbrain venous system A venous system that is part of a hindbrain. NMDCO_relaxed.owl UBERON:0006311 biolink:NamedThing chamber of eyeball A segment of the eyeball that is filled with refractive media. NMDCO_relaxed.owl UBERON:0006574 biolink:NamedThing pectinate line The pectinate line (anocutaneous line, dentate line, anorectal junction) is a line which divides the upper 2/3rds and lower 1/3rd of the anal canal. Developmentally, this line represents the hindgut-proctodeum junction. It is an important anatomical landmark, and several distinctions can be made based upon the location of a structure relative to this line:. NMDCO_relaxed.owl UBERON:0006761 biolink:NamedThing corneo-scleral junction The edge of the cornea where it joins the sclera; the limbus is a common site for the occurrence of corneal epithelial neoplasm. NMDCO_relaxed.owl UBERON:0009127 biolink:NamedThing epibranchial ganglion Cranial ganglion which develops from an epibranchial placode. NMDCO_relaxed.owl UBERON:0010230 biolink:NamedThing eyeball of camera-type eye The core globe-shaped component of the camera-type eye. NMDCO_relaxed.owl UBERON:0010286 biolink:NamedThing midbrain neural tube Portion of neural tube that gives rise to the midbrain. NMDCO_relaxed.owl UBERON:0010371 biolink:NamedThing ecto-epithelium Epithelium composed of cells that develops from the ectoderm[FMA,modified]. NMDCO_relaxed.owl UBERON:0010409 biolink:NamedThing ocular surface region The integrated unit (of the eye) that consists of the conjunctiva, the corneal surface, and the ocular mucosal adnexa including the lid margins and the meibomian gland openings, the lacrimal glands and the lacrimal drainage system, all which are critical to maintain ocular surface integrity and provide protection from external antigens and pathogenic microorganisms. NMDCO_relaxed.owl UBERON:0010427 biolink:NamedThing ciliary processes The ciliary processes are formed by the inward folding of the various layers of the choroid, i.e. , the choroid proper and the lamina basalis, and are received between corresponding foldings of the suspensory ligament of the lens. NMDCO_relaxed.owl UBERON:0011215 biolink:NamedThing central nervous system cell part cluster A multi cell part structure that is part of a central nervous system. NMDCO_relaxed.owl UBERON:0011892 biolink:NamedThing anterior uvea Front (ventral) portion of the vascular, pigmentary, or middle coat of the eye, including the ciliary body and the iris. NMDCO_relaxed.owl UBERON:0012490 biolink:NamedThing muscle layer of anal canal A muscular coat that is part of a anal canal. NMDCO_relaxed.owl UBERON:0013704 biolink:NamedThing notochordal canal A tubular passage that extends from the primitive pit into the head process during the early stages of embryonic development in mammals. It perforates the splanchnopleure layer so that the yolk sac and the amnion are connected temporarily. NMDCO_relaxed.owl UBERON:0016854 biolink:NamedThing dorsal part of optic cup The dorsal region of the optic cup that gives rise to the dorsal part of the retina. NMDCO_relaxed.owl UBERON:0018239 biolink:NamedThing rhombomere boundary A boundary delimiting a rhombomere. NMDCO_relaxed.owl UBERON:0019207 biolink:NamedThing chorioretinal region The part of the eye that consists of both the retina and the optic choroid. NMDCO_relaxed.owl UBERON:0036362 biolink:NamedThing wall of anal canal NMDCO_relaxed.owl UBERON:0036661 biolink:NamedThing wall of ventricular system of brain NMDCO_relaxed.owl UBERON:0036925 biolink:NamedThing wall of eyeball NMDCO_relaxed.owl CL:0000100 biolink:NamedThing motor neuron An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes or inhibits movement. NMDCO_relaxed.owl CL:0000152 biolink:NamedThing exocrine cell A cell of an exocrine gland; i.e. a gland that discharges its secretion via a duct. NMDCO_relaxed.owl CL:0000154 biolink:NamedThing protein secreting cell NMDCO_relaxed.owl CL:0000159 biolink:NamedThing seromucus secreting cell NMDCO_relaxed.owl CL:0000167 biolink:NamedThing peptide hormone secreting cell NMDCO_relaxed.owl CL:0000168 biolink:NamedThing insulin secreting cell NMDCO_relaxed.owl CL:0000170 biolink:NamedThing glucagon secreting cell A cell that secretes glucagon. NMDCO_relaxed.owl CL:0000172 biolink:NamedThing somatostatin secreting cell NMDCO_relaxed.owl CL:0000174 biolink:NamedThing steroid hormone secreting cell NMDCO_relaxed.owl CL:0000319 biolink:NamedThing mucus secreting cell NMDCO_relaxed.owl CL:0000447 biolink:NamedThing carbohydrate secreting cell NMDCO_relaxed.owl CL:0000457 biolink:NamedThing biogenic amine secreting cell NMDCO_relaxed.owl CL:0000458 biolink:NamedThing serotonin secreting cell A cell type that secretes 5-Hydroxytryptamine (serotonin). NMDCO_relaxed.owl CL:0000459 biolink:NamedThing noradrenergic cell A cell capable of producting norepiniphrine. Norepiniphrine is a catecholamine with multiple roles including as a hormone and a neurotransmitter. In addition, epiniphrine is synthesized from norepiniphrine by the actions of the phenylethanolamine N-methyltransferase enzyme. NMDCO_relaxed.owl CL:0000593 biolink:NamedThing androgen secreting cell A steroid hormone secreting cell that secretes androgen. NMDCO_relaxed.owl CL:0000125 biolink:NamedThing glial cell A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons. NMDCO_relaxed.owl CL:0000133 biolink:NamedThing neurectodermal cell Ectoderm destined to be nervous tissue. NMDCO_relaxed.owl CL:0000355 biolink:NamedThing multi-potent skeletal muscle stem cell A multifate stem cell found in skeletal muscle than can differentiate into many different cell types, including muscle. Distinct cell type from satellite cell. NMDCO_relaxed.owl CL:0002183 biolink:NamedThing stem cell of gastric gland A stomach epithelial cell that is olumnar in form with a few short apical microvilli; relatively undifferentiated mitotic cell from which other types of gland are derived; few in number, situated in the isthmus region of the gland and base of the gastric pit. NMDCO_relaxed.owl CL:0002664 biolink:NamedThing cardioblast A stem cell that can give rise to multiple cell types (i.e. smooth muscle, endothelial) in the developing heart. NMDCO_relaxed.owl CL:0005026 biolink:NamedThing hepatoblast Multi fate stem cell that gives rise to both hepatocytes and cholangiocytes as descendants. The term often refers to fetal precursors of hepatocytes (differently from 'hepatic stem cell', usually applied to the self-renewing pool of hepatocyte precursors in the adult liver). Hepatoblasts may also be endogenous, as some stem cells found in the liver come from the bone marrow via blood circulation. NMDCO_relaxed.owl CL:0000147 biolink:NamedThing pigment cell A pigment cell is a cell that contains pigment granules. NMDCO_relaxed.owl CL:0000306 biolink:NamedThing crystallin accumulating cell NMDCO_relaxed.owl CL:0000138 biolink:NamedThing chondrocyte Skeletogenic cell that is terminally differentiated, secretes an avascular, GAG-rich matrix, is embedded in cartilage tissue matrix, retains the ability to divide, and develops from a chondroblast cell. NMDCO_relaxed.owl CL:0000153 biolink:NamedThing glycosaminoglycan secreting cell A cell that secretes glycosaminoglycans. NMDCO_relaxed.owl CL:0000667 biolink:NamedThing collagen secreting cell An extracellular matrix secreting cell that secretes collagen. NMDCO_relaxed.owl CL:0000149 biolink:NamedThing visual pigment cell NMDCO_relaxed.owl CL:0000327 biolink:NamedThing extracellular matrix secreting cell NMDCO_relaxed.owl CL:0000164 biolink:NamedThing enteroendocrine cell An endocrine cell that is located in the epithelium of the gastrointestinal tract or in the pancreas. NMDCO_relaxed.owl CL:0000622 biolink:NamedThing acinar cell A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus). NMDCO_relaxed.owl CL:0002657 biolink:NamedThing glandular cell of esophagus A glandular epithelial cell of the esophagus. NMDCO_relaxed.owl CL:0002658 biolink:NamedThing glandular cell of the large intestine A glandular epithelial cell of the large intestine. NMDCO_relaxed.owl CL:0002659 biolink:NamedThing glandular cell of stomach A glandular epithelial cell that is part of the stomach. NMDCO_relaxed.owl CL:1001588 biolink:NamedThing colon glandular cell Glandular cell of colon epithelium. Example: Goblet cells; enterocytes or absorptive cells; enteroendocrine and M cells. NMDCO_relaxed.owl CL:1001589 biolink:NamedThing duodenum glandular cell Glandular cell of duodenal epithelium. Example: Enterocytes, Goblet cells, enteroendocrine cells; Paneth cells; M cells; Brunner's gland cell. NMDCO_relaxed.owl CL:1001592 biolink:NamedThing gallbladder glandular cell Glandular cell of gallbladder epithelium. NMDCO_relaxed.owl CL:1001595 biolink:NamedThing rectum glandular cell Glandular cell of rectal epithelium. Example: Goblet cell; enterocytes or absorptive cells; enteroendocrine and M cells. NMDCO_relaxed.owl CL:1001598 biolink:NamedThing small intestine glandular cell A glandular cell found in the epithelium of the small intestine. Example: Enterocytes, Goblet cells, enteroendocrine cells; Paneth cells; M cells; Somatostatin-secreting Cells (D-cells) . NMDCO_relaxed.owl CL:1001599 biolink:NamedThing pancreas exocrine glandular cell Glandular cell of exocrine pancreas epithelium. Example: pancreatic acinar cell, glandular cells in pancreatic canaliculi, glandular cells in pancreatic ducts. NMDCO_relaxed.owl CL:0002074 biolink:NamedThing myocardial endocrine cell The myoendocrine cellis a specialized myocyte localized mainly in the right and left atrial appendages, and also scattered within other areas of the atria and along the conductive system in the ventricular septum. The most conspicuous feature distinguishing myoendocrine cells from other atrial myoctyes is the presence of membane-bounded secretory granules (these granules contain precursor of cardiodilatins or atrial natriuretic polypeptides). NMDCO_relaxed.owl CL:0008024 biolink:NamedThing pancreatic endocrine cell An endocrine cell that is part of the pancreas. NMDCO_relaxed.owl CL:0000710 biolink:NamedThing neurecto-epithelial cell Epithelial cells derived from neural plate and neural crest. NMDCO_relaxed.owl CL:0002088 biolink:NamedThing interstitial cell of Cajal This is a cell found in the gastrointestinal tract of mammals and serves as a pacemaker that triggers gut contraction. ICCs mediate inputs from the enteric nervous system to smooth muscle cells and are thought to be the cells from which gastrointestinal stromal tumors (GISTs) arise. NMDCO_relaxed.owl CL:0000507 biolink:NamedThing endorphin secreting cell A peptide hormone secreting cell that secretes endorphin. NMDCO_relaxed.owl CL:0000509 biolink:NamedThing gastrin secreting cell A peptide hormone secreting cell that secretes gastrin. NMDCO_relaxed.owl CL:0000696 biolink:NamedThing PP cell A cell that stores and secretes pancreatic polypeptide hormone. NMDCO_relaxed.owl CL:0000169 biolink:NamedThing type B pancreatic cell A cell that secretes insulin and is located towards the center of the islets of Langerhans. NMDCO_relaxed.owl CL:0000502 biolink:NamedThing type D enteroendocrine cell A cell found throughout the gastrointestinal tract and in the pancreas. They secrete somatostatin in both an endocrine and paracrine manner. Somatostatin inhibits gastrin, cholecystokinin, insulin, glucagon, pancreatic enzymes, and gastric hydrochloric acid. A variety of substances which inhibit gastric acid secretion (vasoactive intestinal peptide, calcitonin gene-related peptide, cholecystokinin, beta-adrenergic agonists, and gastric inhibitory peptide) are thought to act by releasing somatostatin. NMDCO_relaxed.owl CL:0000508 biolink:NamedThing type G enteroendocrine cell An endocrine cell found in the pyloric gland mucosa (antral mucosa) of the stomach of mammals and responsible for the secretion of gastrin and enkephalin. Most abundant in pyloric antrum, pyramidal in form with a narrow apex bearing long microvilli. NMDCO_relaxed.owl CL:0002067 biolink:NamedThing type A enteroendocrine cell An enteroendocrine cell that produces glucagon. NMDCO_relaxed.owl CL:0009006 biolink:NamedThing enteroendocrine cell of small intestine An enteroendocrine cell that is located in the small intestine. NMDCO_relaxed.owl CL:0009042 biolink:NamedThing enteroendocrine cell of colon An enteroendocrine cell that is located in the colon. NMDCO_relaxed.owl CL:0009063 biolink:NamedThing enteroendocrine cell of anorectum An enteroendocrine cell that is located in the anorectum. NMDCO_relaxed.owl CL:1000222 biolink:NamedThing stomach neuroendocrine cell NMDCO_relaxed.owl CL:1001516 biolink:NamedThing intestinal enteroendocrine cell The various hormone- or neurotransmitter-secreting cells present throughout the mucosa of the intestinal tract. NMDCO_relaxed.owl CL:0000171 biolink:NamedThing pancreatic A cell A type of enteocrine cell found in the periphery of the islets of Langerhans that secretes glucagon. NMDCO_relaxed.owl CL:0000173 biolink:NamedThing pancreatic D cell A D cell located in the pancreas. Peripherally placed within the islets like type A cells; contains somatostatin. NMDCO_relaxed.owl CL:0002275 biolink:NamedThing pancreatic PP cell A PP cell located in the islets of the pancreas. NMDCO_relaxed.owl CL:0002264 biolink:NamedThing type A cell of stomach A type of enteroendocrine cell found in the stomach that secretes glucagon. NMDCO_relaxed.owl CL:0002265 biolink:NamedThing type D cell of colon A D cell located in the colon. NMDCO_relaxed.owl CL:0002266 biolink:NamedThing type D cell of small intestine A type D cell of the small intestine. NMDCO_relaxed.owl CL:0002267 biolink:NamedThing type D cell of stomach A type D cell found in the stomach. NMDCO_relaxed.owl CL:0000417 biolink:NamedThing endopolyploid cell NMDCO_relaxed.owl CL:0000187 biolink:NamedThing muscle cell A mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns. NMDCO_relaxed.owl CL:0000393 biolink:NamedThing electrically responsive cell A cell whose function is determined by its response to an electric signal. NMDCO_relaxed.owl CL:0002092 biolink:NamedThing bone marrow cell A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells. NMDCO_relaxed.owl CL:0002246 biolink:NamedThing peripheral blood stem cell A hematopoeitic stem cell found in the blood. Normally found in very limited numbers in the peripheral circulation (less than 0.1% of all nucleated cells). NMDCO_relaxed.owl CL:0002521 biolink:NamedThing subcutaneous adipocyte An adipocyte that is part of subcutaneous adipose tissue. NMDCO_relaxed.owl CL:0008022 biolink:NamedThing endocardial cushion cell A mesenchymal cell of the endocardial cushion. These cells develop via an epithelial to mesenchymal transition when endocardial cells break cell-to-cell contacts and migrate into the cardiac jelly. Cells from this population form the heart septa and valves. NMDCO_relaxed.owl CL:0010020 biolink:NamedThing cardiac glial cell NMDCO_relaxed.owl CL:1000309 biolink:NamedThing epicardial adipocyte An adipocyte that is part of the epicardial fat. NMDCO_relaxed.owl CL:2000001 biolink:NamedThing peripheral blood mononuclear cell A leukocyte with a single non-segmented nucleus in the mature form found in the circulatory pool of blood. NMDCO_relaxed.owl CL:2000074 biolink:NamedThing splenocyte Any leukocyte that is part of a spleen. NMDCO_relaxed.owl GO:0016528 biolink:NamedThing sarcoplasm The cytoplasm of a muscle cell; includes the sarcoplasmic reticulum. NMDCO_relaxed.owl GO:0030017 biolink:NamedThing sarcomere The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. NMDCO_relaxed.owl GO:0036194 biolink:NamedThing muscle cell projection A prolongation or process extending from a muscle cell. A muscle cell is a mature contractile cell, commonly known as a myocyte. This cell has as part of its cytoplasm myofibrils organized in various patterns. NMDCO_relaxed.owl GO:0036195 biolink:NamedThing muscle cell projection membrane The portion of the plasma membrane surrounding a muscle cell projection. NMDCO_relaxed.owl GO:0043292 biolink:NamedThing contractile fiber Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle. NMDCO_relaxed.owl GO:0098975 biolink:NamedThing postsynapse of neuromuscular junction The postsynapse of a neuromuscular junction. In vertebrate muscles this includes the motor end-plate, consisting of postjunctional folds of the sarcolemma. NMDCO_relaxed.owl UBERON:0000948 biolink:NamedThing heart A myogenic muscular circulatory organ found in the vertebrate cardiovascular system composed of chambers of cardiac muscle. It is the primary circulatory organ. NMDCO_relaxed.owl UBERON:0001265 biolink:NamedThing trabecula of spleen A trabecula that is part of a spleen. NMDCO_relaxed.owl UBERON:0002099 biolink:NamedThing cardiac septum The thin membranous structure between the two heart atria or the thick muscular structure between the two heart ventricles. NMDCO_relaxed.owl UBERON:0002190 biolink:NamedThing subcutaneous adipose tissue A portion of adipose tissue that is part of the hypodermis, beneath the dermis. NMDCO_relaxed.owl UBERON:0002345 biolink:NamedThing descending thoracic aorta The part of the aorta that extends from the arch of the aorta to the diaphragm, and from which arises numerous branches that supply oxygenated blood to the chest cage and the organs within the chest. NMDCO_relaxed.owl UBERON:0002348 biolink:NamedThing epicardium A region of the serous membrane that forms the innermost layer of the pericardium and the outer surface of the heart. NMDCO_relaxed.owl UBERON:0002371 biolink:NamedThing bone marrow The soft tissue that fills the cavities of bones. NMDCO_relaxed.owl UBERON:0002376 biolink:NamedThing cranial muscle Any skeletal muscle that is part of the head region. NMDCO_relaxed.owl UBERON:0002385 biolink:NamedThing muscle tissue Muscle tissue is a contractile tissue made up of actin and myosin fibers[GO]. NMDCO_relaxed.owl UBERON:0002390 biolink:NamedThing hematopoietic system Anatomical system that is involved in the production of hematopoietic cells. NMDCO_relaxed.owl UBERON:0002511 biolink:NamedThing trabecula carnea The supporting bundles of muscular fibers lining the walls of the ventricles of the heart. NMDCO_relaxed.owl UBERON:0003081 biolink:NamedThing lateral plate mesoderm Portion of the middle of the three primary germ layers of the embryo that resides on the periphery of the embryo, is continuous with the extra-embryonic mesoderm, splits into two layers enclosing the intra-embryonic coelom, and gives rise to body wall structures[MP]. NMDCO_relaxed.owl UBERON:0003610 biolink:NamedThing heart elastic tissue The type of heart connective tissue found in the endocardial layer that consists mainly of elastic fibers. NMDCO_relaxed.owl UBERON:0003614 biolink:NamedThing blood vessel elastic tissue Elastic tissue layer that lines a blood vessel layer. NMDCO_relaxed.owl UBERON:0004140 biolink:NamedThing primary heart field A specific region of the lateral mesoderm that will form the primary beating heart tube. In mammals the primary heart field gives rise to the left ventricle. NMDCO_relaxed.owl UBERON:0004145 biolink:NamedThing outflow tract The outflow tract is the portion of the heart through which blood flows into the arteries. NMDCO_relaxed.owl UBERON:0004151 biolink:NamedThing cardiac chamber A cardiac chamber surrounds an enclosed cavity within the heart. NMDCO_relaxed.owl UBERON:0004177 biolink:NamedThing hemopoietic organ Organ that is part of the hematopoietic system. NMDCO_relaxed.owl UBERON:0004271 biolink:NamedThing outflow tract pericardium A pericardium that is part of a outflow tract [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004292 biolink:NamedThing cardiac skeleton Dense connective tissue that separates the atria from the ventricles and provides physical support for the heart. NMDCO_relaxed.owl UBERON:0004375 biolink:NamedThing bone of free limb or fin A bone that is part of an appendage [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004797 biolink:NamedThing blood vessel layer Any of the tissue layers that comprise a blood vessel. Examples: tunica media, tunica adventitia. NMDCO_relaxed.owl UBERON:0005498 biolink:NamedThing primitive heart tube Multi-tissue structure that arises from the heart rudiment and will become the heart tube. NMDCO_relaxed.owl UBERON:0005728 biolink:NamedThing extraembryonic mesoderm NMDCO_relaxed.owl UBERON:0005732 biolink:NamedThing paired limb/fin field A ring of cells capable of forming a limb or paired fin[Gilbert,modified]. NMDCO_relaxed.owl UBERON:0005800 biolink:NamedThing section of aorta Any portion of the aorta including the ascending and descending aorta, and aortic arch or a portion of the aortic orifice of the left ventricle. NMDCO_relaxed.owl UBERON:0005979 biolink:NamedThing crista terminalis The vertical crest of the interior wall of the right atrium that lies to the right of the sinus of the vena cava and separates this from the remainder of the right atrium. NMDCO_relaxed.owl UBERON:0005983 biolink:NamedThing heart layer The laminar structure of the heart. NMDCO_relaxed.owl UBERON:0005985 biolink:NamedThing coronary vessel Any of the arteries or veins that supply blood to the heart or return blood from the heart muscles to the circulation. NMDCO_relaxed.owl UBERON:0005988 biolink:NamedThing atrium myocardial trabecula The supporting bundles of muscular fibers lining the walls of the atrial myocardium. NMDCO_relaxed.owl UBERON:0006293 biolink:NamedThing spleen primordium A dense syncitial-like mesenchymal thickening in the dorsal mesogastrium[ISBN]. the embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing spleen[MP]. NMDCO_relaxed.owl UBERON:0006904 biolink:NamedThing head mesenchyme from mesoderm A head mesenchyme that develops_from a mesoderm. NMDCO_relaxed.owl UBERON:0007005 biolink:NamedThing cardiogenic splanchnic mesoderm The splanchnic mesoderm in the cardiogenic region where the heart develops; it gives rise to endocardial heart tubes that fuse to form the primordial cardiac tube, the heart primordium[web]. Two migratory heart primordia that move ventrally during the course of neurulation, and then fuse[XAO]. NMDCO_relaxed.owl UBERON:0007390 biolink:NamedThing pectoral appendage cartilage tissue A cartilage tissue that is part of a pectoral appendage. NMDCO_relaxed.owl UBERON:0008856 biolink:NamedThing stomach muscularis externa The smooth muscle layer of the stomach wall that functions to churn and mix food and gastric secretions as well as to move food along the digestive tract to the intestines. NMDCO_relaxed.owl UBERON:0008876 biolink:NamedThing hypodermis skeletal muscle layer Any skeletal muscle organ in the hypodermis / superficial fascia. NMDCO_relaxed.owl UBERON:0009751 biolink:NamedThing cardiac mesenchyme The embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing cardiac structures. NMDCO_relaxed.owl UBERON:0009881 biolink:NamedThing anterior lateral plate mesoderm NMDCO_relaxed.owl UBERON:0009889 biolink:NamedThing secondary heart field A specific region of the lateral mesoderm that will form the majority of the mesodermal component of the right ventricle, arterial pole (outflow tract) and venous pole (inflow tract). NMDCO_relaxed.owl UBERON:0010333 biolink:NamedThing extraembryonic membrane mesenchyme Mesenchyme that is part of a extraembryonic membrane. NMDCO_relaxed.owl UBERON:0010335 biolink:NamedThing maxillary process mesenchyme from head mesenchyme Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a maxillary process mesenchyme. NMDCO_relaxed.owl UBERON:0010360 biolink:NamedThing pharyngeal arch mesenchyme from head mesenchyme Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a entire pharyngeal arch associated mesenchyme. NMDCO_relaxed.owl UBERON:0010377 biolink:NamedThing mesenchyme from somatopleure Mesenchyme that develops_from a somatopleure. NMDCO_relaxed.owl UBERON:0010378 biolink:NamedThing mesenchyme from splanchnopleure Mesenchyme that develops_from a splanchnopleure. NMDCO_relaxed.owl UBERON:0011222 biolink:NamedThing intra-ocular muscle NMDCO_relaxed.owl UBERON:0011582 biolink:NamedThing paired limb/fin skeleton The collection of all skeletal elements in an individual limb or fin. NMDCO_relaxed.owl UBERON:0011820 biolink:NamedThing atrioventricular region An anatomical junction that divides and overlaps with and atrium and a ventricle in the heart. NMDCO_relaxed.owl UBERON:0011861 biolink:NamedThing aorta collagen fibril The connective tissue bundles in the extracellular matrix of aorta tissue that are composed of collagen, and play a role in tissue strength and elasticity. NMDCO_relaxed.owl UBERON:0011899 biolink:NamedThing epimysium Epimysium is a layer of connective tissue which ensheaths the entire muscle. It is composed of dense irregular connective tissue. It is continuous with fascia and other connective tissue wrappings of muscle including the endomysium, and perimysium. It is also continuous with tendons where it becomes thicker and collagenous. NMDCO_relaxed.owl UBERON:0012275 biolink:NamedThing meso-epithelium Epithelium that derives from the mesoderm. [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0012429 biolink:NamedThing hematopoietic tissue Blood-forming tissue, consisting of reticular fibers and cells. NMDCO_relaxed.owl UBERON:0015129 biolink:NamedThing epicardial fat Visceral intrapericardial fat contiguous with the myocardial surface. NMDCO_relaxed.owl UBERON:0022350 biolink:NamedThing visceral serous membrane Serous membrane layer that is adjacent to and lines an organ. NMDCO_relaxed.owl UBERON:0022351 biolink:NamedThing parietal serous membrane Serous membrane layer that lines to a body cavity. NMDCO_relaxed.owl UBERON:0035965 biolink:NamedThing wall of blood vessel NMDCO_relaxed.owl UBERON:0036146 biolink:NamedThing cardiopharyngeal field An region of the mesoderm that includes anterior lateral mesoderm of the first heart field plus contiguous pharyngeal mesoderm that gives rise to second-heart-field-derived regions of the heart and branchiomeric muscles. NMDCO_relaxed.owl UBERON:0037144 biolink:NamedThing wall of heart Wall of organ which has as its parts the endocardium, myocardium , epicardium, and the cardiac septum, surrounded by the pericardial sac proper and is continuous with the walls of the systemic and pulmonary arterial and venous trees. NMDCO_relaxed.owl UBERON:1000024 biolink:NamedThing parenchyma of spleen A parenchyma that is part of a spleen. NMDCO_relaxed.owl CL:0008000 biolink:NamedThing non-striated muscle cell Any muscle cell in which the fibers are not organised into sarcomeres. NMDCO_relaxed.owl CL:0008007 biolink:NamedThing visceral muscle cell A muscle cell that is part of some visceral muscle. NMDCO_relaxed.owl CL:0008008 biolink:NamedThing striated visceral muscle cell A visceral muscle cell that is striated. Examples include the visceral muscle cells of arhtropods. NMDCO_relaxed.owl CL:0008009 biolink:NamedThing transversely striated visceral muscle cell A visceral muscle that is transversely striated. Examples include the visceral muscle cells of arthropods. NMDCO_relaxed.owl CL:1000223 biolink:NamedThing lung neuroendocrine cell A neuroendocrine cell that is part of respiratory epithelium of the lung and is involved in the sensory detection of environmental stimuli, including hypoxia, nicotine and air pressure. Ultrastructurally, this cell type is characterized by the presence of cytoplasmic dense core granules, which are considered the storage sites of amine and peptide hormones. Lung neuroendocrine cells are innervated and appear as solitary cells or as clustered masses, localized at airway bifurcation sites, called neuroepithelial bodies that can release serotonin in response to hypoxia and interact with sensory nerve terminals. Lung neuroendocrine cells also function as reserve stem cells that repair the surrounding epithelium after injury. NMDCO_relaxed.owl CL:0000562 biolink:NamedThing nucleate erythrocyte An erythrocyte having a nucleus. NMDCO_relaxed.owl CL:0002421 biolink:NamedThing nucleated reticulocyte A reticulocyte that retains the nucleus and other organelles. Found in birds, fish, amphibians and reptiles. NMDCO_relaxed.owl CL:0000525 biolink:NamedThing syncytiotrophoblast cell A cell from the outer syncytial layer of the trophoblast of an early mammalian embryo, directly associated with the maternal blood supply. It secretes hCG in order to maintain progesterone secretion and sustain a pregnancy. NMDCO_relaxed.owl CL:0002372 biolink:NamedThing myotube A transversely striated, synctial muscle cell, formed by the fusion of myoblasts. NMDCO_relaxed.owl CL:0000287 biolink:NamedThing eye photoreceptor cell NMDCO_relaxed.owl CL:0000488 biolink:NamedThing visible light photoreceptor cell A photoreceptor cell that detects visible light. NMDCO_relaxed.owl CL:2000019 biolink:NamedThing compound eye photoreceptor cell Any photoreceptor cell that is part of a compound eye. NMDCO_relaxed.owl CL:0000313 biolink:NamedThing serous secreting cell Columnar glandular cell with irregular nucleus, copious granular endoplasmic reticulum and supranuclear granules. Secretes a watery fluid containing proteins known as serous fluid. NMDCO_relaxed.owl CL:0002132 biolink:NamedThing stromal cell of ovary A stomal cell of the ovary NMDCO_relaxed.owl CL:0002574 biolink:NamedThing stromal cell of pancreas A stromal cell of the pancreas. NMDCO_relaxed.owl CL:0009021 biolink:NamedThing stromal cell of lamina propria of large intestine A stromal cell found in the lamina propria of the large intestine. NMDCO_relaxed.owl CL:0009022 biolink:NamedThing stromal cell of lamina propria of small intestine A stromal cell found in the lamina propria of the small intestine. NMDCO_relaxed.owl CL:0009040 biolink:NamedThing stromal cell of lamina propria of colon A stromal cell found in the lamina propria of the colon. NMDCO_relaxed.owl CL:0009053 biolink:NamedThing stromal cell of anorectum lamina propria A stromal cell found in the lamina propria of the anorectum. NMDCO_relaxed.owl CL:0010001 biolink:NamedThing stromal cell of bone marrow A stromal cell that is part_of a bone marrow. NMDCO_relaxed.owl CL:0008019 biolink:NamedThing mesenchymal cell A non-polarised cell precursor cell that is part of some mesenchyme, is associated with the cell matrix but is not connected to other cells and is capable of migration. NMDCO_relaxed.owl CL:0000335 biolink:NamedThing mesenchyme condensation cell A mesenchymal cell in embryonic development found in a contracting mass and that gives rise to osteoprogenitors. NMDCO_relaxed.owl CL:0000569 biolink:NamedThing cardiac mesenchymal cell A mesenchymal cell found in the developing heart and that develops into some part of the heart. These cells derive from intra- and extra-cardiac sources, including the endocardium, epicardium, neural crest, and second heart field. NMDCO_relaxed.owl CL:0000351 biolink:NamedThing trophoblast cell A cell lining the outside of the blastocyst. After binding to the endometrium, trophoblast cells develop into two distinct layers, an inner layer of mononuclear cytotrophoblast cells and an outer layer of continuous multinuclear cytoplasm, the syncytiotrophoblast cells, which form the early fetal-maternal interface. NMDCO_relaxed.owl CL:1000274 biolink:NamedThing trophectodermal cell NMDCO_relaxed.owl CL:0000352 biolink:NamedThing epiblast cell A cell of the outer layer of a blastula that gives rise to the ectoderm after gastrulation. NMDCO_relaxed.owl CL:0000353 biolink:NamedThing blastoderm cell An undifferentiated cell produced by early cleavages of the fertilized egg (zygote). NMDCO_relaxed.owl CL:0008002 biolink:NamedThing skeletal muscle fiber A transversely striated, synctial cell of skeletal muscle. It is formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. NMDCO_relaxed.owl CL:0008017 biolink:NamedThing adult skeletal muscle myoblast A skeletal muscle myoblast that is part of a skeletal mucle. These cells are formed following acivation and division of skeletal muscle satellite cells. They form a transient population that is lost when they fuse to form skeletal muscle fibers. NMDCO_relaxed.owl CL:0008034 biolink:NamedThing mural cell Mural cells are pericytes and the vascular smooth muscle cells (vSMCs) of the microcirculation. NMDCO_relaxed.owl CL:0002159 biolink:NamedThing general ecto-epithelial cell Epithelial cells derived from general body ectoderm and ectoderm placodes. NMDCO_relaxed.owl CL:0000404 biolink:NamedThing electrically signaling cell A cell that initiates an electrical signal and passes that signal to another cell. NMDCO_relaxed.owl CL:0000397 biolink:NamedThing ganglion interneuron NMDCO_relaxed.owl CL:0000402 biolink:NamedThing CNS interneuron An interneuron that has its cell body in a central nervous system. NMDCO_relaxed.owl CL:0005000 biolink:NamedThing spinal cord interneuron A CNS interneuron located in the spinal cord. NMDCO_relaxed.owl CL:0002610 biolink:NamedThing raphe nuclei neuron A neuron of the raphe nuclei. NMDCO_relaxed.owl CL:0002612 biolink:NamedThing neuron of the ventral spinal cord A neuron of the ventral spinal cord. NMDCO_relaxed.owl CL:0011001 biolink:NamedThing spinal cord motor neuron A motor neuron that passes from the spinal cord toward or to a muscle and conducts an impulse that causes movement. NMDCO_relaxed.owl CL:2000047 biolink:NamedThing brainstem motor neuron Any motor neuron that is part of a brainstem. NMDCO_relaxed.owl CL:0000506 biolink:NamedThing enkephalin secreting cell An endorphine cell that secretes enkephalin. NMDCO_relaxed.owl CL:0002180 biolink:NamedThing mucous cell of stomach A mucous cell in the epithelium of the stomach. NMDCO_relaxed.owl CL:0000513 biolink:NamedThing cardiac muscle myoblast A precursor cell destined to differentiate into cardiac muscle cell. NMDCO_relaxed.owl CL:0000514 biolink:NamedThing smooth muscle myoblast A precursor cell destined to differentiate into smooth muscle myocytes. NMDCO_relaxed.owl CL:0010021 biolink:NamedThing cardiac myoblast NMDCO_relaxed.owl CL:0000746 biolink:NamedThing cardiac muscle cell Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. In mammals, the contractile fiber resembles those of skeletal muscle but are only one third as large in diameter, are richer in sarcoplasm, and contain centrally located instead of peripheral nuclei. NMDCO_relaxed.owl CL:0010008 biolink:NamedThing cardiac endothelial cell NMDCO_relaxed.owl CL:0011019 biolink:NamedThing mesothelial cell of epicardium A mesothelial cell that is part of the epicardium. NMDCO_relaxed.owl CL:0000552 biolink:NamedThing orthochromatic erythroblast The final stage of the nucleated, immature erythrocyte, before nuclear loss. Typically the cytoplasm is described as acidophilic, but it still shows a faint polychromatic tint. The nucleus is small and initially may still have coarse, clumped chromatin, as in its precursor, the polychromatophilic erythroblast, but ultimately it becomes pyknotic, and appears as a deeply staining, blue-black, homogeneous structureless mass. The nucleus is often eccentric and sometimes lobulated. NMDCO_relaxed.owl CL:0000595 biolink:NamedThing enucleate erythrocyte An erythrocyte lacking a nucleus. NMDCO_relaxed.owl CL:0002540 biolink:NamedThing mesenchymal stem cell of the bone marrow A mesenchymal stem cell that is part of the bone marrow. NMDCO_relaxed.owl CL:0002570 biolink:NamedThing mesenchymal stem cell of adipose tissue A mesenchymal stem cell of adipose tissue. NMDCO_relaxed.owl CL:0002571 biolink:NamedThing hepatic mesenchymal stem cell A mesenchymal stem cell of liver. NMDCO_relaxed.owl CL:0002572 biolink:NamedThing vertebral mesenchymal stem cell A mesenchymal stem cell of the vertebrae. NMDCO_relaxed.owl CL:0000573 biolink:NamedThing retinal cone cell One of the two photoreceptor cell types in the vertebrate retina. In cones the photopigment is in invaginations of the cell membrane of the outer segment. Cones are less sensitive to light than rods, but they provide vision with higher spatial and temporal acuity, and the combination of signals from cones with different pigments allows color vision. NMDCO_relaxed.owl CL:0000604 biolink:NamedThing retinal rod cell One of the two photoreceptor cell types of the vertebrate retina. In rods the photopigment is in stacks of membranous disks separate from the outer cell membrane. Rods are more sensitive to light than cones, but rod mediated vision has less spatial and temporal resolution than cone vision. NMDCO_relaxed.owl CL:0002422 biolink:NamedThing enucleated reticulocyte A reticulocyte lacking a nucleus and showing a basophilic reticulum under vital staining due to the presence of ribosomes. NMDCO_relaxed.owl CL:0002224 biolink:NamedThing lens epithelial cell A cell of the cuboidal epithelium that covers the lens. The cells of the lens epithelium regulate most of the homeostatic functions of the lens. As ions, nutrients, and liquid enter the lens from the aqueous humor, Na+/K+ ATPase pumps in the lens epithelial cells pump ions out of the lens to maintain appropriate lens osmolarity and volume, with equatorially positioned lens epithelium cells contributing most to this current. The activity of the Na+/K+ ATPases keeps water and current flowing through the lens from the poles and exiting through the equatorial regions. The cells of the lens epithelium also serve as the progenitors for new lens fibers. It constantly lays down fibers in the embryo, fetus, infant, and adult, and continues to lay down fibers for lifelong growth. NMDCO_relaxed.owl CL:0000737 biolink:NamedThing striated muscle cell Muscle cell which has as its direct parts myofilaments organized into sarcomeres. NMDCO_relaxed.owl CL:1000409 biolink:NamedThing myocyte of sinoatrial node A muscle cell that is part of the sinoatrial node. NMDCO_relaxed.owl CL:1000410 biolink:NamedThing myocyte of atrioventricular node A muscle cell that is part of the atrioventricular node. NMDCO_relaxed.owl CL:0000740 biolink:NamedThing retinal ganglion cell The set of neurons that receives neural inputs via bipolar, horizontal and amacrine cells. The axons of these cells make up the optic nerve. NMDCO_relaxed.owl CL:0000842 biolink:NamedThing mononuclear cell A leukocyte with a single non-segmented nucleus in the mature form. NMDCO_relaxed.owl CL:0002087 biolink:NamedThing nongranular leukocyte A leukocyte that lacks granules. NMDCO_relaxed.owl CL:0002064 biolink:NamedThing pancreatic acinar cell A secretory cell found in pancreatic acini that secretes digestive enzymes and mucins. This cell is a typical zymogenic cell, have a basal nucleus and basophilic cytoplasm consisting of regular arrays of granular endoplasmic reticulum with mitochondria and dense secretory granules. NMDCO_relaxed.owl CL:0002079 biolink:NamedThing pancreatic ductal cell Epithelial cell found in the ducts of the pancreas. This cell type contributes to the high luminal pH. NMDCO_relaxed.owl CL:0002080 biolink:NamedThing pancreatic centro-acinar cell A cubodial epithelial cell that is continuous with the lining of intercalated ducts that drain the acinus. This cell type secretes a high pH solution to aid in activation of zymogens, and can differentiate into endocrine and exocrine pancreatic cell types. NMDCO_relaxed.owl CL:0002068 biolink:NamedThing Purkinje myocyte Specialized cardiac myocyte that is subendocardially interspersed with the regular cardiac muscle cell. They are uninucleate cylindrical cells, associated end-to-end in long rows, continue from the node to the atrioventricular bundle; relatively short compared to ordinary myocytes but are nearly twice their diameter. NMDCO_relaxed.owl CL:0002086 biolink:NamedThing specialized cardiac myocyte A cardiac myocyte that is an excitable cells in the myocardium, specifically in the conducting system of heart. NMDCO_relaxed.owl CL:0002072 biolink:NamedThing nodal myocyte A specialized cardiac myocyte in the sinoatrial and atrioventricular nodes. The cell is slender and fusiform confined to the nodal center, circumferentially arranged around the nodal artery. NMDCO_relaxed.owl CL:0002073 biolink:NamedThing transitional myocyte Specialized cardiac myocyte which is in the internodal tract and atrioventricular node. The cell is more slender than ordinary atrial myocytes and has more myofibrils than nodal myocytes. NMDCO_relaxed.owl CL:2000046 biolink:NamedThing ventricular cardiac muscle cell Any cardiac muscle cell that is part of a cardiac ventricle. NMDCO_relaxed.owl CL:0002095 biolink:NamedThing hilus cell of ovary A cell in the hilum of the ovary that produces androgens. NMDCO_relaxed.owl CL:0002262 biolink:NamedThing endothelial cell of sinusoid An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver. NMDCO_relaxed.owl CL:0002350 biolink:NamedThing endocardial cell An endothelial cell that lines the intracavitary lumen of the heart, separating the circulating blood from the underlying myocardium. This cell type releases a number of vasoactive substances including prostacyclin, nitrous oxide and endothelin. NMDCO_relaxed.owl CL:0009094 biolink:NamedThing endothelial cell of hepatic portal vein An endothelial cell that is part of a hepatic portal vein. NMDCO_relaxed.owl CL:1000398 biolink:NamedThing endothelial cell of hepatic sinusoid An endothelial cell that is part of the hepatic sinusoid. These cells possess flattened areas containing perforations about 0.1 micrometers in diameter, known as fenestrae. The fenestrae are arranged in groups known as sieve plates. NMDCO_relaxed.owl CL:1000412 biolink:NamedThing endothelial cell of arteriole An endothelial cell that is part of the arteriole. NMDCO_relaxed.owl CL:1000413 biolink:NamedThing endothelial cell of artery A blood vessel endothelial cell that is part of an arterial endothelium. NMDCO_relaxed.owl CL:1001572 biolink:NamedThing colon endothelial cell A vascular endothelial cell found in colon blood vessels. NMDCO_relaxed.owl CL:2000053 biolink:NamedThing splenic endothelial cell Any endothelial cell that is part of a spleen. NMDCO_relaxed.owl CL:4033061 biolink:NamedThing endothelial cell of central vein of liver An endothelial cell that is part of a central vein of liver. NMDCO_relaxed.owl CL:0002144 biolink:NamedThing capillary endothelial cell An endothelial cell found in capillaries. NMDCO_relaxed.owl CL:0002543 biolink:NamedThing vein endothelial cell An endothelial cell that is part of the vein. NMDCO_relaxed.owl CL:0010006 biolink:NamedThing cardiac blood vessel endothelial cell NMDCO_relaxed.owl CL:2000008 biolink:NamedThing microvascular endothelial cell Any blood vessel endothelial cell that is part of a microvascular endothelium. NMDCO_relaxed.owl CL:0011030 biolink:NamedThing dermal microvascular endothelial cell Any microvascular endothelial cell that is part of the dermis. NMDCO_relaxed.owl CL:2000016 biolink:NamedThing lung microvascular endothelial cell Any lung endothelial cell that is part of a microvascular endothelium. NMDCO_relaxed.owl CL:0002352 biolink:NamedThing gestational hematopoietic stem cell A hematopoietic stem cell that exists during embryogenesis. NMDCO_relaxed.owl CL:0002368 biolink:NamedThing respiratory epithelial cell An endo-epithelial cell of the respiratory tract. NMDCO_relaxed.owl CL:0002253 biolink:NamedThing epithelial cell of large intestine An epithelial cell of the large intestine. NMDCO_relaxed.owl CL:0002254 biolink:NamedThing epithelial cell of small intestine An epithelial cell of the small intestine. NMDCO_relaxed.owl CL:0002680 biolink:NamedThing PP cell of intestine A PP cell found in intestine. NMDCO_relaxed.owl CL:1000310 biolink:NamedThing adipocyte of epicardial fat of right ventricle An adipocyte that is part of the epicardial fat of right ventricle. NMDCO_relaxed.owl CL:1000311 biolink:NamedThing adipocyte of epicardial fat of left ventricle An adipocyte that is part of the epicardial fat of left ventricle. NMDCO_relaxed.owl CL:0002538 biolink:NamedThing intrahepatic cholangiocyte An epithelial cell of the intrahepatic portion of the bile duct. These cells are flattened or cuboidal in shape, and have a small nuclear-to-cytoplasmic ratio relative to large/extrahepatic cholangiocytes. NMDCO_relaxed.owl CL:0019020 biolink:NamedThing extrahepatic cholangiocyte An epithelial cell of the extrahepatic bile ducts, including the left and right hepatic duct, common hepatic duct, and common bile duct. They are columnar in shape, and have a large nuclear-to-cytoplasmic ratio relative to small/intrahepatic cholangiocytes. NMDCO_relaxed.owl CL:0002539 biolink:NamedThing aortic smooth muscle cell A smooth muscle cell of the aorta. NMDCO_relaxed.owl CL:0002589 biolink:NamedThing smooth muscle cell of the brachiocephalic vasculature A smooth muscle cell of the bachiocephalic vasculature. NMDCO_relaxed.owl CL:0002591 biolink:NamedThing smooth muscle cell of the pulmonary artery A smooth muscle of the pulmonary artery. NMDCO_relaxed.owl CL:0002595 biolink:NamedThing smooth muscle cell of the subclavian artery A smooth muscle cell of the subclavian artery. NMDCO_relaxed.owl CL:0002596 biolink:NamedThing smooth muscle cell of the carotid artery Smooth muscle cell of the carotid artery. NMDCO_relaxed.owl CL:0008035 biolink:NamedThing microcirculation associated smooth muscle cell NMDCO_relaxed.owl CL:0002546 biolink:NamedThing embryonic blood vessel endothelial progenitor cell An endothelial progenitor cell that participates in angiogenesis during development. NMDCO_relaxed.owl CL:0011007 biolink:NamedThing paraxial cell A cell in the area of mesoderm in the neurulating embryo that flanks and forms simultaneously with the neural tube. The cells of this region give rise to somites. NMDCO_relaxed.owl CL:0002547 biolink:NamedThing fibroblast of the aortic adventitia A fibroblast of the aortic adventitia. NMDCO_relaxed.owl CL:0002551 biolink:NamedThing fibroblast of dermis NMDCO_relaxed.owl CL:2000013 biolink:NamedThing fibroblast of skin of abdomen Any skin fibroblast that is part of a skin of abdomen. NMDCO_relaxed.owl CL:0002632 biolink:NamedThing epithelial cell of lower respiratory tract NMDCO_relaxed.owl CL:3000000 biolink:NamedThing ciliated epithelial cell of esophagus A ciliated epithelial cell of the esophagus. NMDCO_relaxed.owl CL:0002663 biolink:NamedThing myocardial endocrine cell of atrium A myocardial endocrine cell that is part of the atrium. NMDCO_relaxed.owl CL:1000482 biolink:NamedThing myocardial endocrine cell of interventricular septum A myocardial endocrine cell that is part of the interventricular septum. NMDCO_relaxed.owl CL:0005024 biolink:NamedThing somatomotor neuron A motor neuron that innervates a skeletal muscle. These motor neurons are all excitatory and cholinergic. NMDCO_relaxed.owl CL:0009024 biolink:NamedThing mesothelial cell of small intestine A mesothelial cell that is part of the small intestine. NMDCO_relaxed.owl CL:0009025 biolink:NamedThing mesothelial cell of colon A mesothelial cell that is part of the colon. NMDCO_relaxed.owl CL:1000456 biolink:NamedThing mesothelial cell of parietal peritoneum A mesothelial cell that is part of the parietal peritoneum. NMDCO_relaxed.owl CL:1000457 biolink:NamedThing mesothelial cell of visceral peritoneum A mesothelial cell that is part of the visceral peritoneum. NMDCO_relaxed.owl CL:1000490 biolink:NamedThing mesothelial cell of peritoneum A mesothelial cell that is part of the peritoneum. NMDCO_relaxed.owl CL:1000491 biolink:NamedThing mesothelial cell of pleura A mesothelial cell that is part of the pleura. NMDCO_relaxed.owl CL:1000492 biolink:NamedThing mesothelial cell of parietal pleura A mesothelial cell that is part of the parietal pleura. NMDCO_relaxed.owl CL:1000493 biolink:NamedThing mesothelial cell of visceral pleura A mesothelial cell that is part of the visceral pleura. NMDCO_relaxed.owl UBERON:0000114 biolink:NamedThing lung connective tissue The connective tissue located between the respiratory (airway and alveolar) epithelium, the capillary endothelium and pleural mesothelium; it contains basement membrane composed of collagen, elastin, proteoglycans, and fibronectin. NMDCO_relaxed.owl UBERON:0000977 biolink:NamedThing pleura The invaginated serous membrane that surrounds the lungs (the visceral portion) and lines the walls of the pleural cavity (parietal portion). NMDCO_relaxed.owl UBERON:0002400 biolink:NamedThing parietal pleura The outer serous membrane of the pulmonary pleural. NMDCO_relaxed.owl UBERON:0002401 biolink:NamedThing visceral pleura The inner serous membrane of the pulmonary pleural. The visceral pleura lines the lungs. NMDCO_relaxed.owl UBERON:0003512 biolink:NamedThing lung blood vessel A blood vessel that is part of a lung [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004233 biolink:NamedThing lower respiratory tract smooth muscle A portion of smooth muscle tissue that is part of a lower respiratory tract [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004240 biolink:NamedThing gallbladder smooth muscle A portion of smooth muscle tissue that is part of a gallbladder [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004783 biolink:NamedThing gallbladder serosa A serous membrane that is part of a gallbladder [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004834 biolink:NamedThing hepatic duct smooth muscle Smooth muscle tissue in all or part of a hepatic duct. NMDCO_relaxed.owl UBERON:0004883 biolink:NamedThing lung mesenchyme The mass of tissue made up of mesenchymal cells in the lung. NMDCO_relaxed.owl UBERON:0004902 biolink:NamedThing urogenital sinus epithelium The fetal urogenital sinus (from which the prostate derives) is a simple cylinder of stratified basal epithelium, surrounded by mesenchyme and positioned between the embryonic bladder and pelvic urethra. NMDCO_relaxed.owl UBERON:0005672 biolink:NamedThing right lung endothelium An endothelium that is part of a right lung. NMDCO_relaxed.owl UBERON:0005673 biolink:NamedThing left lung endothelium An endothelium that is part of a left lung. NMDCO_relaxed.owl UBERON:0013479 biolink:NamedThing lung endothelium A blood vessel endothelium that is part of a lung [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0015796 biolink:NamedThing liver blood vessel A blood vessel that is part of a liver. NMDCO_relaxed.owl UBERON:0036073 biolink:NamedThing respiratory primordium mesenchyme NMDCO_relaxed.owl UBERON:8400021 biolink:NamedThing liver serosa Hepatic serous coat; peritoneal covering of the liver, enclosing almost all except for a triangular area on its posterior surface (the 'bare area of the liver') and a smaller area where the liver and gallbladder are in direct contact. NMDCO_relaxed.owl CL:1000279 biolink:NamedThing smooth muscle cell of large intestine A smooth muscle cell that is part of the large intestine. NMDCO_relaxed.owl CL:1000280 biolink:NamedThing smooth muscle cell of colon A smooth muscle cell that is part of the colon. NMDCO_relaxed.owl CL:0009097 biolink:NamedThing embryonic skeletal muscle fiber A skeletal muscle fiber found in an embryo. In mammalian embryos, skeletal muscle expresses myosin heavy chain-embryonic (MyHC-emb, encoded by the MYH3 gene), which regulates skeletal muscle development. NMDCO_relaxed.owl CL:0010004 biolink:NamedThing mononuclear cell of bone marrow A mononuclear cell that is part_of a bone marrow. NMDCO_relaxed.owl CL:0017502 biolink:NamedThing acidophilic cytoplasm Cytoplasm that exhibits a characteristic staining and color, red or pink, with Eosin stain. NMDCO_relaxed.owl GO:0005737 biolink:NamedThing cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. NMDCO_relaxed.owl CL:0017503 biolink:NamedThing basophilic cytoplasm Cytoplasm that exhibits molecular interaction for basic dyes under specific pH conditions. NMDCO_relaxed.owl CL:0017504 biolink:NamedThing polychromatophilic cytoplasm Cytoplasm that exhibits affinity for both basic and acid stains under specific pH conditions. NMDCO_relaxed.owl GO:0005938 biolink:NamedThing cell cortex The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins. NMDCO_relaxed.owl GO:0032838 biolink:NamedThing plasma membrane bounded cell projection cytoplasm All of the contents of a plasma membrane bounded cell projection, excluding the plasma membrane surrounding the projection. NMDCO_relaxed.owl GO:0097014 biolink:NamedThing ciliary plasm All of the contents of a cilium, excluding the plasma membrane surrounding the cilium. NMDCO_relaxed.owl GO:0099568 biolink:NamedThing cytoplasmic region Any (proper) part of the cytoplasm of a single cell of sufficient size to still be considered cytoplasm. NMDCO_relaxed.owl GO:0120111 biolink:NamedThing neuron projection cytoplasm All of the contents of a plasma membrane bounded neuron projection, excluding the plasma membrane surrounding the projection. NMDCO_relaxed.owl GO:1990917 biolink:NamedThing ooplasm The cytoplasm of an ovum. NMDCO_relaxed.owl CL:0019021 biolink:NamedThing endothelial cell of periportal hepatic sinusoid An endothelial cell found in the periportal region hepatic sinusoid, near the portal triad. The fenestrae of these cells are larger but fewer in number compared with those of endothelial cells near the centrilobular region of the hepatic sinusoid. NMDCO_relaxed.owl CL:0019022 biolink:NamedThing endothelial cell of pericentral hepatic sinusoid An endothelial cell found in the centrilobular region hepatic sinusoid, near the central vein. The fenestrae of these cells are smaller but more numerous compared with those of endothelial cells near the periportal region of the hepatic sinusoid. NMDCO_relaxed.owl CL:1000275 biolink:NamedThing smooth muscle cell of small intestine A smooth muscle cell that is part of the small intestine. NMDCO_relaxed.owl CL:1000276 biolink:NamedThing smooth muscle fiber of duodenum A smooth muscle cell that is part of the duodenum. NMDCO_relaxed.owl CL:1000282 biolink:NamedThing smooth muscle fiber of ascending colon A smooth muscle cell that is part of the ascending colon. NMDCO_relaxed.owl CL:1000283 biolink:NamedThing smooth muscle fiber of transverse colon A smooth muscle cell that is part of the transverse colon. NMDCO_relaxed.owl CL:1000284 biolink:NamedThing smooth muscle fiber of descending colon A smooth muscle cell that is part of the descending colon. NMDCO_relaxed.owl CL:1000285 biolink:NamedThing smooth muscle cell of sigmoid colon A smooth muscle cell that is part of the sigmoid colon. NMDCO_relaxed.owl CL:1000361 biolink:NamedThing transitional myocyte of interatrial septum A transitional myocyte that is part of the interatrial septum. NMDCO_relaxed.owl CL:1000362 biolink:NamedThing transitional myocyte of interventricular septum A transitional myocyte that is part of the interventricular septum. NMDCO_relaxed.owl CL:1000478 biolink:NamedThing transitional myocyte of sinoatrial node A transitional myocyte that is part of the sinoatrial node. NMDCO_relaxed.owl CL:1000376 biolink:NamedThing Purkinje myocyte of interventricular septum A Purkinje myocyte that is part of the interventricular septum. NMDCO_relaxed.owl CL:1000479 biolink:NamedThing Purkinje myocyte of atrioventricular node A Purkinje myocyte that is part of the atrioventricular node. NMDCO_relaxed.owl CL:2000080 biolink:NamedThing mesenchymal stem cell of abdominal adipose tissue Any mesenchymal stem cell of adipose tissue that is part of an abdomen. NMDCO_relaxed.owl CL:4040004 biolink:NamedThing mesenchymal stem cell of orbital adipose tissue Any mesenchymal stem cell of adipose tissue that is part of an orbital region. NMDCO_relaxed.owl CL:4028001 biolink:NamedThing pulmonary capillary endothelial cell Any capillary endothelial cell that is part of a lung. NMDCO_relaxed.owl CL:4033008 biolink:NamedThing vein endothelial cell of respiratory system A(n) vein endothelial cell that is part of a(n) respiratory system. NMDCO_relaxed.owl OBO:COB_0000121 biolink:NamedThing measurement datum NMDCO_relaxed.owl IAO:0000027 biolink:NamedThing data item An information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements. NMDCO_relaxed.owl IAO:0000100 biolink:NamedThing data set A data item that is an aggregate of other data items of the same type that have something in common. Averages and distributions can be determined for data sets. NMDCO_relaxed.owl IAO:0000102 biolink:NamedThing data about an ontology part Data about an ontology part is a data item about a part of an ontology, for example a term NMDCO_relaxed.owl IAO:0000109 biolink:NamedThing measurement datum A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device. NMDCO_relaxed.owl OBO:COB_0001000 biolink:NamedThing exposure of organism A process during which an organism comes into contact with another entity. NMDCO_relaxed.owl ENVO:02500000 biolink:NamedThing environmental system process A process in which includes the components of an environmental system as participants. NMDCO_relaxed.owl GO:0003674 biolink:NamedThing gene product or complex activity A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs. NMDCO_relaxed.owl GO:0008150 biolink:NamedThing biological process A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.|A biological process represents a specific objective that the organism is genetically programmed to achieve. Biological processes are often described by their outcome or ending state, e.g., the biological process of cell division results in the creation of two daughter cells (a divided cell) from a single parent cell. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.|A process that emerges from two or more causally-connected macromolecular activities and has evolved to achieve a biological objective. NMDCO_relaxed.owl GO:0100001 biolink:NamedThing regulation of skeletal muscle contraction by action potential Any action potential process that regulates skeletal muscle contraction. NMDCO_relaxed.owl OBI:0000011 biolink:NamedThing planned process A process that realizes a plan which is the concretization of a plan specification. NMDCO_relaxed.owl PO:0009012 biolink:NamedThing plant structure development stage A stage in the life of a plant structure (PO:0009011) during which the plant structure undergoes developmental processes. NMDCO_relaxed.owl ENVO:00000000 biolink:NamedThing geographic feature An astrononmical body part which delimited by physical discontinuities with its surroundings. NMDCO_relaxed.owl ENVO:00000117 biolink:NamedThing plantation An intentional planting of a crop, on a large scale, usually for uses other than cereal production or pasture. The term is currently most often used for plantings of trees and shrubs. The term tends also to be used for plantings maintained on economic bases other than that of subsistence farming. NMDCO_relaxed.owl ENVO:00000191 biolink:NamedThing solid astronomical body part A part of an astronomical body which is primarily composed of solid material. NMDCO_relaxed.owl ENVO:00000428 biolink:NamedThing biome A biome is an ecosystem which is undergoing climactic ecological succession. NMDCO_relaxed.owl ENVO:00001998 biolink:NamedThing soil An environmental material which is primarily composed of minerals, varying proportions of sand, silt, and clay, organic material such as humus, interstitial gases, liquids, and a broad range of resident micro- and macroorganisms. NMDCO_relaxed.owl ENVO:00002132 biolink:NamedThing metalimnion A cline which is part of a lake and across which temperature changes rapidly with depth. NMDCO_relaxed.owl ENVO:00002138 biolink:NamedThing beach sand NMDCO_relaxed.owl ENVO:00002158 biolink:NamedThing ditch water NMDCO_relaxed.owl ENVO:00002160 biolink:NamedThing estuarine mud Mud which is part of an estuary. NMDCO_relaxed.owl ENVO:00002206 biolink:NamedThing coal mine waste material NMDCO_relaxed.owl ENVO:00002228 biolink:NamedThing pond water NMDCO_relaxed.owl ENVO:00005795 biolink:NamedThing marine mud Mud which is part of a marine ecosystem. NMDCO_relaxed.owl ENVO:00005797 biolink:NamedThing lake bottom mud Mud which constitutes the bed of a lake. NMDCO_relaxed.owl ENVO:00005798 biolink:NamedThing acid dune sand NMDCO_relaxed.owl ENVO:00005800 biolink:NamedThing desert sand Sand which is part of a desert. NMDCO_relaxed.owl ENVO:00005801 biolink:NamedThing rhizosphere The narrow region of soil that is directly influenced by root secretions and associated soil microorganisms. NMDCO_relaxed.owl ENVO:01000260 biolink:NamedThing nutricline within a water body A nutricline which is part of a water body. NMDCO_relaxed.owl ENVO:01000276 biolink:NamedThing ecoregion A large unit of land or water containing a geographically distinct assemblage of species, natural communities, and environmental conditions. NMDCO_relaxed.owl ENVO:01000280 biolink:NamedThing ecozone Ecozones delineate large areas of a planetary surface within which organisms have been evolving in relative isolation over long periods of time, separated from one another by geographic features, such as oceans, broad deserts, or high mountain ranges, that constitute barriers to migration. NMDCO_relaxed.owl ENVO:01000301 biolink:NamedThing estuarine water Brackish water which is part of an estuary. NMDCO_relaxed.owl ENVO:01000320 biolink:NamedThing marine environment A marine environment and enviroment which is determined by a marine water body. NMDCO_relaxed.owl ENVO:01000352 biolink:NamedThing field An unbroken expanse (as of ice) NMDCO_relaxed.owl ENVO:01000407 biolink:NamedThing littoral zone An aquatic environment which is the part of a sea, lake, or river that is close to the shore. NMDCO_relaxed.owl ENVO:01000639 biolink:NamedThing planetary structural layer A planetary structural layer is laminar part of a terrestrial planet or other rocky body large enough to have differentiation by density. Planetary layers have differing physicochemical properties and composition. NMDCO_relaxed.owl ENVO:01000666 biolink:NamedThing area of open water An area of a planet's surface which is primarily composed of water in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000739 biolink:NamedThing habitat An environmental system which can sustain and allow the growth of an ecological population. NMDCO_relaxed.owl ENVO:01000746 biolink:NamedThing area of perennial ice or snow An area of a planet's surface which is primarily composed of snow or water ice, present throughout multiple years, in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000782 biolink:NamedThing utility line A cable used to trasmit electricity from its point of production to its point of consumption. NMDCO_relaxed.owl ENVO:01000817 biolink:NamedThing biosphere An astronomical body part which includes all the living entities within the gravitational sphere of influence of that body, as well as the non-living and dead entities with which they interact. NMDCO_relaxed.owl ENVO:01000820 biolink:NamedThing pedosphere An astronomical body part which is composed of soil, subject to soil formation processes, and found on the surface of a lithosphere. NMDCO_relaxed.owl ENVO:01000821 biolink:NamedThing photosphere An astronomical body part which is composed of those parts of a star, distal from the star's core, from which light is radiated into space. NMDCO_relaxed.owl ENVO:01000822 biolink:NamedThing planetary photic zone A planetary part which is exposed, at least periodically, to light. NMDCO_relaxed.owl ENVO:01000823 biolink:NamedThing illuminated biosphere part An astronomical body part which includes those parts of a biosphere that are, at least periodically, illuminated and in which photosynthesis may occur. NMDCO_relaxed.owl ENVO:01000868 biolink:NamedThing domestic solar panel array A solar panel array that is integrated into the power system of a human dwelling. NMDCO_relaxed.owl ENVO:01000954 biolink:NamedThing alpine tree line ecotone A tree line ecotone across which trees cease to grow due to the low temperatures or duration of snow cover that occur at increased elevations above mean sea level. NMDCO_relaxed.owl ENVO:01000983 biolink:NamedThing technosphere A part of an astronomical body which includes, as parts, all the entities which have been constructed or manufactured by humans or their technology and which are within the gravitational sphere of influence of that body. NMDCO_relaxed.owl ENVO:01001044 biolink:NamedThing soil environment An environmental system which has its properties and dynamics determined by soil. NMDCO_relaxed.owl ENVO:01001199 biolink:NamedThing terrestrial environmental zone An environmental zone which is bounded by material parts of a land mass or the atmosphere or space adjacent to it. NMDCO_relaxed.owl ENVO:01001201 biolink:NamedThing marine environmental zone An astronomical body part which is part of a marine environment. NMDCO_relaxed.owl ENVO:01001207 biolink:NamedThing ranch An area of land used for the herding and grazing of livestock. NMDCO_relaxed.owl ENVO:01001226 biolink:NamedThing terrestrial natural environment A natural environment which is located on a land mass. NMDCO_relaxed.owl ENVO:01001227 biolink:NamedThing aquatic natural environment A natural environment which is within a water body. NMDCO_relaxed.owl ENVO:01001239 biolink:NamedThing forest canopy NMDCO_relaxed.owl ENVO:01001240 biolink:NamedThing woodland canopy A canopy which is part of a woodland ecosystem. NMDCO_relaxed.owl ENVO:01001241 biolink:NamedThing crop canopy A canopy which is composed of the aboveground portion, or crowns, of a community of crop plants. NMDCO_relaxed.owl ENVO:01001257 biolink:NamedThing saline shrimp pond water Saline water which is derived from sea water and used during the cultivation of crustaceans. NMDCO_relaxed.owl ENVO:01001382 biolink:NamedThing area of attached mussel assemblages An area which is dominated by dense accumulations of mussels attached to a substrate other than conspecifics, including the associated faunal communities and predators present on the mussels (e.g., starfish). NMDCO_relaxed.owl ENVO:01001396 biolink:NamedThing abyssal clay Clay which is part of an abyssal plain. NMDCO_relaxed.owl ENVO:01001468 biolink:NamedThing intertidal ecosystem An ecosystem which overlaps those areas of the foreshore and seabed that are exposed to the air at low tide and submerged at high tide. NMDCO_relaxed.owl ENVO:01001479 biolink:NamedThing fluid astronomical body part A part of an astronomical body which is primarily composed of fluid. NMDCO_relaxed.owl ENVO:01001483 biolink:NamedThing surface of an astronomical body A surface layer where the solid or liquid material of an astronomical body comes into contact with an atmosphere or outer space. NMDCO_relaxed.owl ENVO:01001519 biolink:NamedThing area of pack ice An area in which masses of drift ice aggregate such that they cover a minimum of 7/10ths-8/10ths of the surface the water body they are floating in. NMDCO_relaxed.owl ENVO:01001520 biolink:NamedThing area of sea ice An environmental zone that overlaps that part of a water body covered or partially covered by sea ice. NMDCO_relaxed.owl ENVO:01001521 biolink:NamedThing area of drift ice An area in which masses of drift ice aggregate such that they cover less than 7/10ths of the surface the water body they are floating in. NMDCO_relaxed.owl ENVO:01001609 biolink:NamedThing cryospheric layer A layer which is part of a cryosphere. NMDCO_relaxed.owl ENVO:01001647 biolink:NamedThing colloid suspended in a hydrosphere A colloidal suspension which is dispersed through a part of a hydrosphere. NMDCO_relaxed.owl ENVO:01001676 biolink:NamedThing marine cline A cline which is part of a marine water body. NMDCO_relaxed.owl ENVO:01001776 biolink:NamedThing subsurface zone of an astronomical body An environmental zone which includes those regions of an astronomical body which are not exposed to its atmosphere or space. NMDCO_relaxed.owl ENVO:01001780 biolink:NamedThing desert ecosystem An ecosystem in which the composition, structure, and function of resident ecological assemblages are primarily determined by a desert. NMDCO_relaxed.owl ENVO:01001784 biolink:NamedThing compound astronomical body part A part of an astronomical body which is composed of a continuous medium bearing liquid, gaseous, and solid material in variable quantities. NMDCO_relaxed.owl ENVO:01001787 biolink:NamedThing aquatic ecosystem NMDCO_relaxed.owl ENVO:01001790 biolink:NamedThing terrestrial ecosystem An ecosystem which primarily occurs on land. NMDCO_relaxed.owl ENVO:01001829 biolink:NamedThing human settlement An anthropised ecosystem which is determined by the presence of humans and their constructions. NMDCO_relaxed.owl ENVO:03000143 biolink:NamedThing cryosphere An astronomical body part which is composed primarily of environmental materials in their frozen form. NMDCO_relaxed.owl ENVO:03501109 biolink:NamedThing subway train A passenger train which runs along an undergroud rail system. NMDCO_relaxed.owl ENVO:03501111 biolink:NamedThing public transit system A constructed transport system which is owned by a government or other form of public representation. NMDCO_relaxed.owl ENVO:03605006 biolink:NamedThing stream water Water which is part of a stream. NMDCO_relaxed.owl ENVO:04000007 biolink:NamedThing lake water Water which is part of a lake. NMDCO_relaxed.owl ENVO:04000008 biolink:NamedThing soil organic matter Organic material in soil, which consists of plant and animal residues at various stages of decomposition, cells and tissues of soil organisms, and substances synthesized by soil organisms. NMDCO_relaxed.owl ENVO:06105107 biolink:NamedThing marine anthropogenic litter Anthropogenic litter which is present in the marine environment. NMDCO_relaxed.owl ENVO:00000001 biolink:NamedThing bedding-plane cave A cavity developed along a bedding-plane and elongate in cross-section as a result. NMDCO_relaxed.owl ENVO:00000067 biolink:NamedThing cave Naturally formed, subterranean open area or chamber. NMDCO_relaxed.owl ENVO:00000030 biolink:NamedThing dead cave A cave without streams or drips of water. NMDCO_relaxed.owl ENVO:00000071 biolink:NamedThing fault cave A cave developed along a fault or fault zone, either by movement of the fault or by preferential solution along it. NMDCO_relaxed.owl ENVO:00000263 biolink:NamedThing fissure cave A narrow, vertical cave passage, often developed along a joint but not necessarily so. Usually due to solution but sometimes to tension. NMDCO_relaxed.owl ENVO:00000321 biolink:NamedThing joint-plane cave A cavity developed along a joint and elongate in cross-section. NMDCO_relaxed.owl ENVO:00000323 biolink:NamedThing live cave A cave containing a stream or active speleothems. NMDCO_relaxed.owl ENVO:00000324 biolink:NamedThing outflow cave A cave from which a stream flows or formerly did so and which cannot be followed upstream to the surface. NMDCO_relaxed.owl ENVO:00000326 biolink:NamedThing sea cave A cave in present-day or emerged sea cliffs, formed by wave attack or solution. NMDCO_relaxed.owl ENVO:00000440 biolink:NamedThing rock shelter A shallow cave-like opening at the base of a bluff or cliff. NMDCO_relaxed.owl ENVO:00012411 biolink:NamedThing karst cave A cave which is part of a karst formation. NMDCO_relaxed.owl ENVO:01000360 biolink:NamedThing solutional cave A cave formed by the dissolution of soluble rock or other solid material such as limestone, chalk, dolomite, gypsum, salt or marble. NMDCO_relaxed.owl ENVO:01000361 biolink:NamedThing primary cave A cave formed at the same time as the surrounding rock. NMDCO_relaxed.owl ENVO:01000363 biolink:NamedThing erosional cave A cave formed by erosion caused by flowing streams carrying rocks or sediments. NMDCO_relaxed.owl ENVO:01000364 biolink:NamedThing glacier cave A glacier cave is a cave formed within or under a glacier. NMDCO_relaxed.owl ENVO:01000365 biolink:NamedThing ice cave An ice cave is a bedrock cave which contains year-round ice formations. NMDCO_relaxed.owl ENVO:01000366 biolink:NamedThing talus cave A talus cave is a cave formed by the openings between large boulders which have fallen into a random heap. NMDCO_relaxed.owl ENVO:01000367 biolink:NamedThing anchialine cave An anchialine cave is a cave which contains an anchialine pool. NMDCO_relaxed.owl ENVO:01000369 biolink:NamedThing vadose cave A cave which is within a vadose zone. NMDCO_relaxed.owl ENVO:00000002 biolink:NamedThing anthropogenic geographic feature An anthropogenic geographic feature is a geographic feature resulting from the influence of human beings on nature. NMDCO_relaxed.owl ENVO:00000012 biolink:NamedThing hydrographic feature A geographical feature associated with water. NMDCO_relaxed.owl ENVO:00000003 biolink:NamedThing mine tailing Mine tailings are the materials left over after the process of separating the valuable fraction from the uneconomic fraction (gangue) of an ore. NMDCO_relaxed.owl ENVO:0010001 biolink:NamedThing anthropogenic environmental material Anthropogenic material in or on which organisms may live. NMDCO_relaxed.owl ENVO:00002044 biolink:NamedThing sludge The residual semi-solid material left from domestic or industrial processes, or wastewater treatment processes. NMDCO_relaxed.owl ENVO:00002230 biolink:NamedThing anthrosol Anthrosols comprise soils that have been modified profoundly through human activities, such as addition of organic materials or household wastes, irrigation and cultivation. NMDCO_relaxed.owl ENVO:00002870 biolink:NamedThing adobe A natural building material mode from sand, clay, water, and some kind of fibrous or organic material (sticks, straw, and/or manure). NMDCO_relaxed.owl ENVO:0010003 biolink:NamedThing agricultural environmental material NMDCO_relaxed.owl ENVO:01000458 biolink:NamedThing concrete Concrete is a composite material composed of an aggregate bonded together with a fluid cement which hardens over time. NMDCO_relaxed.owl ENVO:01000461 biolink:NamedThing refined asphalt Refined asphalt is a sticky, black, and highly viscous liquid or semi-solid with a boiling point above 500 degrees Celsius, obtained from the fractional distillation of crude oil. NMDCO_relaxed.owl ENVO:01000462 biolink:NamedThing masonry cement Masonry cement is a substance used in construction that has the disposition to set and harden and thus may be used to bind materials together. NMDCO_relaxed.owl ENVO:01000474 biolink:NamedThing brick material A portion of brick material is a material derived from a brick which is composed of kneaded clay-bearing soil, expanded clay aggregate, sand and lime, or concrete that has been fire-hardened or air-dried. NMDCO_relaxed.owl ENVO:01000476 biolink:NamedThing plaster Plaster is a building material which has the disposition to harden when it reacts with water, liberating heat through crystallization. Plaster is manufactured as a dry powder and is mixed with water to form a paste when used. NMDCO_relaxed.owl ENVO:01001869 biolink:NamedThing fracking liquid A liquid environmental material which is composed primarily of water ammended with thickening agents and proppants. NMDCO_relaxed.owl ENVO:02000123 biolink:NamedThing paint Any liquid, liquefiable, or mastic composition that, after application to a substrate in a thin layer, converts to a solid film. It is most commonly used to protect, color, or provide texture to objects. NMDCO_relaxed.owl ENVO:03501253 biolink:NamedThing gypsum A soft sulfate mineral composed of calcium sulfate dihydrate. NMDCO_relaxed.owl ENVO:03501324 biolink:NamedThing latex A stable dispersion (emulsion) of polymer microparticles in an aqueous medium. NMDCO_relaxed.owl ENVO:03510055 biolink:NamedThing rubber cement An environmental material which is composed of elastic polymers mixed in a solvent. NMDCO_relaxed.owl ENVO:03510056 biolink:NamedThing methyl cellulose paste An environmental material which is 1) composed primarily of methyl cellulose and water, and 2) formulated to fix wallpaper to walls. NMDCO_relaxed.owl ENVO:03510057 biolink:NamedThing permanent hair dye An environmental material which is 1) manufactured and 2) primarily composed of hydrogen peroxide and ammonia, and 3) when applied to hair, can alter the natural hair pigments for 6-8 weeks. NMDCO_relaxed.owl ENVO:03510058 biolink:NamedThing pharmaceutical ink A colorant fluid which is 1) manufactured and 2) composed of alcohol, titanium dioxide, and propylene glycol. NMDCO_relaxed.owl ENVO:03510060 biolink:NamedThing gel ink A colorant fluid which is 1) manufactured and 2) composed of copper phthalocyanine, iron oxides, water, and biopolymers. NMDCO_relaxed.owl ENVO:03510061 biolink:NamedThing soy ink A colorant fluid which is 1) manufactured and 2) primarily composed of soybean oil, as well as pigment, resin, and wax. NMDCO_relaxed.owl ENVO:03510062 biolink:NamedThing aqueous inkjet printer ink A colorant fluid which is 1) manufactured, 2) primarily composed of water, as well as glycol, and dye, and 3) intended for use in inkjet printers. NMDCO_relaxed.owl ENVO:00000004 biolink:NamedThing administrative region NMDCO_relaxed.owl ENVO:01003020 biolink:NamedThing fiat part of an astronomical object A part of an environmental system whose boundaries are determined by fiat. NMDCO_relaxed.owl ENVO:01000675 biolink:NamedThing atmospheric column A fiat part of an atmosphere which is defined as a vertical, three-dimensional pillar extending from a unit area on a planetary surface and bounded by the top of the atmosphere. NMDCO_relaxed.owl ENVO:01001263 biolink:NamedThing area designated for human defecation A site which has been designated as a place where humans may defecate. NMDCO_relaxed.owl ENVO:01001264 biolink:NamedThing area designated for waste storage A site which has been designated for the storage of waste material. NMDCO_relaxed.owl ENVO:01001384 biolink:NamedThing area of attached faunal communities An environmental zone within which ecological communities of animals are attached to some substrate. NMDCO_relaxed.owl ENVO:01001558 biolink:NamedThing area of seasonal sea ice An environmental zone which overlaps that part of an ocean or sea within which 1) sea ice is present only part of the year, 2) extends from the permanent ice zone to the boundary where winter sea ice extent is at a maximum, and 3) primarily overlaps first-year ice when seasonal ice is present. NMDCO_relaxed.owl ENVO:01001567 biolink:NamedThing protected area An environmental zone which 1) contains ecosystems, constructed features, or other entities deemed to be of natural, historical, cultural, or other significance and 2) has been afforded legal protections restricting one or more forms of use by a competent authority. NMDCO_relaxed.owl ENVO:03400016 biolink:NamedThing area of ice cover An environmental zone which is covered or partially covered by ice. NMDCO_relaxed.owl ENVO:00000005 biolink:NamedThing first-order administrative region A primary administrative division of a country, such as a state in the United States. NMDCO_relaxed.owl ENVO:00000006 biolink:NamedThing second-order administrative region A subdivision of a first-order administrative division. NMDCO_relaxed.owl ENVO:00000007 biolink:NamedThing third-order administrative region A subdivision of a second-order administrative division. NMDCO_relaxed.owl ENVO:00000008 biolink:NamedThing fourth-order administrative region A subdivision of a third-order administrative division. NMDCO_relaxed.owl ENVO:00000135 biolink:NamedThing buffer zone A geographical region that serves the purpose of keeping two or more other areas (often, but not necessarily, countries) distant from one another, for whatever reason. NMDCO_relaxed.owl ENVO:00000009 biolink:NamedThing national geopolitical entity A political association with effective dominion over a geographic area. NMDCO_relaxed.owl ENVO:00000123 biolink:NamedThing political entity A geographical region whose affairs and population are administered by an authority. NMDCO_relaxed.owl ENVO:00000124 biolink:NamedThing supranational geopolitical entity A political entitity established by more than one state and with at least some influence over the affairs of its member states. NMDCO_relaxed.owl ENVO:03501343 biolink:NamedThing first nations reserve A political entity which is defined by contract between the Canadian state ("the Crown") and a First Nations people. NMDCO_relaxed.owl ENVO:00000010 biolink:NamedThing transport feature A construction which enables the movement of humans, their animals or their vehicles. NMDCO_relaxed.owl ENVO:00000073 biolink:NamedThing building A permanent walled and roofed construction. NMDCO_relaxed.owl ENVO:00000076 biolink:NamedThing mine An excavation in the Earth for the purpose of extracting earth materials. NMDCO_relaxed.owl ENVO:00000121 biolink:NamedThing artificial channel A channel of a watercource which has been constructed by humans or their technologies. NMDCO_relaxed.owl ENVO:00000178 biolink:NamedThing levee An artificial slope or wall, usually earthen, which parallels the course of a river, built for the purpose of containing the river. NMDCO_relaxed.owl ENVO:00000377 biolink:NamedThing artificial lake A lake purposefully constructed. NMDCO_relaxed.owl ENVO:00000464 biolink:NamedThing artificial harbor A harbor constructed by human agency. NMDCO_relaxed.owl ENVO:00000469 biolink:NamedThing research facility A facility, permanent or temporary, on land, in air, space or water, where scientific research or measurements can be undertaken. NMDCO_relaxed.owl ENVO:00000565 biolink:NamedThing sports facility A building or region where sports activities can be carried out. NMDCO_relaxed.owl ENVO:00002226 biolink:NamedThing borehole A channel which is constructed by removing materials from land or submerged beds. NMDCO_relaxed.owl ENVO:01000420 biolink:NamedThing building part A building part is a construction which is part of a building. NMDCO_relaxed.owl ENVO:01000424 biolink:NamedThing patio A patio is a paved outdoor area, adjacent to a human house, and used for dining or recreation. NMDCO_relaxed.owl ENVO:01000467 biolink:NamedThing constructed barrier A constructed barrier is a freestanding wall, berm, or fence built to limit movement of entities across a boundary. NMDCO_relaxed.owl ENVO:01000522 biolink:NamedThing latrine pit A latrine pit is an artificial hole or cavity in the ground used to collect human excreta. NMDCO_relaxed.owl ENVO:01000779 biolink:NamedThing public infrastructure The system of public works in a country, state or region, including roads, utility lines and public buildings. NMDCO_relaxed.owl ENVO:01000863 biolink:NamedThing overflow structure A structure which is built into the container of a water body which allows water to flow out of the container when the volume of the water contained exceeds that of its cavity. NMDCO_relaxed.owl ENVO:01000965 biolink:NamedThing constructed swimming pool A construction which is designed to hold water in which humans may swim or perform other leisure activities. NMDCO_relaxed.owl ENVO:01000968 biolink:NamedThing water intake A hydraulic-engineering installation which transports water - in specified amounts, of a specified quality, and in accordance with a water-consumption plan - from a source of supply into a conduit. NMDCO_relaxed.owl ENVO:01001671 biolink:NamedThing open cage mariculture facility A construction which contains the equipment needed to perform mariculture in open cages - permitting the exchange of material with the surrounding marine water. NMDCO_relaxed.owl ENVO:01001873 biolink:NamedThing hatchery A construction in which eggs are hatched under artificial conditions. NMDCO_relaxed.owl ENVO:02000132 biolink:NamedThing constructed monument A human construction which serves as a memorial. NMDCO_relaxed.owl ENVO:02000133 biolink:NamedThing nuclear reactor A human construction which is used to initiate and control a fission nuclear chain reaction or nuclear fusion reactions. NMDCO_relaxed.owl ENVO:02000141 biolink:NamedThing refinery A human construction which is used to process materials into forms that have increased value or utility in downstream processes. NMDCO_relaxed.owl ENVO:03501117 biolink:NamedThing transport hub A place where passengers and cargo are exchanged between vehicles or/and between transport modes. NMDCO_relaxed.owl ENVO:03501122 biolink:NamedThing airport A human construction with extended facilities from which aircraft flight operations take place. NMDCO_relaxed.owl ENVO:03501129 biolink:NamedThing educational facility A human construction in which people are educated. NMDCO_relaxed.owl ENVO:03501134 biolink:NamedThing healthcare facility A human construction in which healthcare is provided. NMDCO_relaxed.owl ENVO:03501201 biolink:NamedThing polling place A human construction which contains one or more polling stations NMDCO_relaxed.owl ENVO:03501202 biolink:NamedThing polling station A human construction which is that part of a polling place where voters cast their ballot NMDCO_relaxed.owl ENVO:03501204 biolink:NamedThing prison facility A human construction which is used to forcibly confine humans. NMDCO_relaxed.owl ENVO:03501288 biolink:NamedThing facility A human construction specially designed for a specific purpose. NMDCO_relaxed.owl ENVO:03501309 biolink:NamedThing booth A human construction which is an enclosure or compartment designed for service provision. NMDCO_relaxed.owl ENVO:03501334 biolink:NamedThing child care facility A human construction in which child care services are provided to a human child by specialized staff and equipment. NMDCO_relaxed.owl ENVO:03501335 biolink:NamedThing day care facility A child care facility in which day care services are provided, by specialized staff and equipment, to a human child during the working day. NMDCO_relaxed.owl ENVO:03501336 biolink:NamedThing place of worship A human construction in which individuals or a group of people such as a congregation come to perform acts of devotion, veneration, or religious study. NMDCO_relaxed.owl ENVO:03600014 biolink:NamedThing pipeline network A human construction which is used to transport a material which is primarily composed of liquid or gas through a system of pipes. NMDCO_relaxed.owl ENVO:03600021 biolink:NamedThing tailings pond A human construction which is used as a storage area for mining tailings. NMDCO_relaxed.owl ENVO:03600039 biolink:NamedThing fermentation pit A pit which has been constructed for use in fermentation processes that will yield alcoholic spirits. NMDCO_relaxed.owl ENVO:03600047 biolink:NamedThing raceway pond A pond which humans have constructed for the cultivation of algae. NMDCO_relaxed.owl ENVO:03600062 biolink:NamedThing fountain A human construction which supplies drinking water by squirting it into a basin or jets water into the air for a decorative or dramatic effect. NMDCO_relaxed.owl ENVO:03600076 biolink:NamedThing waste stabilization pond A human construction which confines wastewater in a depression enclosed by earthen structures. NMDCO_relaxed.owl ENVO:03600080 biolink:NamedThing industrial park A human construction which is used for the purpose of industrial development. NMDCO_relaxed.owl ENVO:03600087 biolink:NamedThing greenhouse A human construction which provides regulated climatic conditions for the growth of plants and whose walls and roof are made chiefly of transparent material, such as glass. NMDCO_relaxed.owl ENVO:03600093 biolink:NamedThing artificial satellite A human construction that has intentionally been placed into orbit. NMDCO_relaxed.owl ENVO:00000011 biolink:NamedThing garden An enclosure for displaying selected plant or animal life. NMDCO_relaxed.owl ENVO:00000026 biolink:NamedThing well A cylindrical hole, pit, or tunnel drilled or dug down to a depth from which water, oil, or gas can be pumped or brought to the surface. NMDCO_relaxed.owl ENVO:00000046 biolink:NamedThing hedge A dense growth of shrubbery planted as a fence or boundary. NMDCO_relaxed.owl ENVO:00000474 biolink:NamedThing cut An excavation of the Earth's surface to provide passage for a road, railway, canal, etc. NMDCO_relaxed.owl ENVO:00000559 biolink:NamedThing weapons test site A region at which weapons, typically military, are tested. NMDCO_relaxed.owl ENVO:00000561 biolink:NamedThing military training area A region in which military personnel train. NMDCO_relaxed.owl ENVO:00000562 biolink:NamedThing park A bounded area of land, or water, usually in its natural or semi-natural (landscaped) state and set aside for some purpose, usually to do with recreation or conservation. NMDCO_relaxed.owl ENVO:00002204 biolink:NamedThing anthropogenic contamination feature An anthropogenic geographic feature which has increased levels of contaminants in its consituent materials. NMDCO_relaxed.owl ENVO:00010442 biolink:NamedThing midden A dump for domestic waste. A term used to describe any kind of feature containing waste products relating to day-to-day human life. NMDCO_relaxed.owl ENVO:01000447 biolink:NamedThing roadside An environmental zone of varying area which is adjacent to a road. NMDCO_relaxed.owl ENVO:01000935 biolink:NamedThing campground A part of an ecosystem which may be or has been used for one or more overnight stays by humans sheltering in tents, camper vans, caravans, or improvised shelters. NMDCO_relaxed.owl ENVO:01000985 biolink:NamedThing fairground A part of an ecosystem which has been allocated to host a gathering of people for multiple entertainment or commercial activities. NMDCO_relaxed.owl ENVO:01000987 biolink:NamedThing market A part of an ecosystem where people gather for the purchase and sale of provisions, livestock, and other goods. NMDCO_relaxed.owl ENVO:03501255 biolink:NamedThing water trough An anthropogenic geographic feature consisting of a receptacle intended to provide drinking water to animals. NMDCO_relaxed.owl ENVO:03600053 biolink:NamedThing yard An anthropogenic geographic feature which consists of land immediately adjacent to a building or a group of buildings. NMDCO_relaxed.owl ENVO:01000254 biolink:NamedThing environmental system A system which has the disposition to environ one or more material entities. NMDCO_relaxed.owl ENVO:01001469 biolink:NamedThing observing system A system of constructed and manufactured products which are used by humans to produce data, information, or knowledge about material, immaterial, or processual entities. NMDCO_relaxed.owl ENVO:01001497 biolink:NamedThing carbonate system of ocean water A system which is composed of carbon-based chemical entities dissolved in or otherwise part of an ocean or sea and the atmosphere adjacent to it, undergoing constant exchange through biogeochemical cycling. NMDCO_relaxed.owl ENVO:03501110 biolink:NamedThing constructed transport system A system which has components that have been constructed to allow the movement of people or goods. NMDCO_relaxed.owl ENVO:03501356 biolink:NamedThing conveyor system A system which is composed of one or more machines that can continuously transport material from one location to at least one other location. NMDCO_relaxed.owl ENVO:03501358 biolink:NamedThing processing line A system which consists of manufacturing equipment that performs manufacturing processes in a linear fashion. NMDCO_relaxed.owl ENVO:00000013 biolink:NamedThing cave system A collection of caves interconnected by enterable passages or linked hydrologically or a cave with an extensive complex of chambers and passages. NMDCO_relaxed.owl ENVO:01001884 biolink:NamedThing surface landform A landform which occurs on the surface of an astronomical body. NMDCO_relaxed.owl ENVO:00000027 biolink:NamedThing spring A surface landform which provides an egress for groundwater or steam to flow out of the ground. NMDCO_relaxed.owl ENVO:00000084 biolink:NamedThing mountain pass A lower point that allows easier access through a mountain range. A pass has the general form of a saddle between two mountains. NMDCO_relaxed.owl ENVO:00000086 biolink:NamedThing plain A region of general uniform slope, comparatively level, and of considerable extent. NMDCO_relaxed.owl ENVO:00000091 biolink:NamedThing beach A landform consisting of loose rock particles such as sand, gravel, shingle, pebbles, cobble, or even shell fragments along the shoreline of a body of water. NMDCO_relaxed.owl ENVO:00000094 biolink:NamedThing volcanic feature A part of an astronomical body associated with a volcano - an opening, or rupture, in that body's surface or crust - which allows hot, molten rock, ash and gases to escape from deep below the surface. NMDCO_relaxed.owl ENVO:00000127 biolink:NamedThing badland An arid terrain with clay-rich soil that has been extensively eroded by wind and water. NMDCO_relaxed.owl ENVO:00000157 biolink:NamedThing peat cut An artificial working of peatland to remove the peat. NMDCO_relaxed.owl ENVO:00000174 biolink:NamedThing isthmus Narrow section of land in a body of water connecting two larger land areas. NMDCO_relaxed.owl ENVO:00000175 biolink:NamedThing karst A surface landform which is formed by the dissolution of a soluble layer or layers of bedrock. NMDCO_relaxed.owl ENVO:00000177 biolink:NamedThing moraine An accumulation of boulders, stones, or other debris carried and deposited by a glacier. NMDCO_relaxed.owl ENVO:00000195 biolink:NamedThing sinkhole A natural depression or hole in the surface topography caused by the removal of soil or bedrock, often both, by water. Sinkholes may vary in size from less than a meter to several hundred meters both in diameter and depth, and vary in form from soil-lined bowls to bedrock-edged chasms. NMDCO_relaxed.owl ENVO:00000256 biolink:NamedThing floodway The stream channel and adjacent areas that carry flood flows in a flood plain. NMDCO_relaxed.owl ENVO:00000277 biolink:NamedThing dry lake A lake that has either permanently or temporally lost its water. NMDCO_relaxed.owl ENVO:00000286 biolink:NamedThing polder An area reclaimed from the sea by diking and draining. NMDCO_relaxed.owl ENVO:00000289 biolink:NamedThing horst The raised fault block bounded by normal faults. The raised block is a portion of the Earth's crust that has remained stationary while the land has sunk on either side of it or has been crushed by a mountain range against it. NMDCO_relaxed.owl ENVO:00000290 biolink:NamedThing graben A depressed block of land bordered by parallel faults. A graben is the result of a block of land being downthrown producing a valley with a distinct scarp on each side. Grabens often occur side-by-side with horsts. Horst and graben structures are indicative of tensional forces and crustal stretching. NMDCO_relaxed.owl ENVO:00000291 biolink:NamedThing drainage basin An extent or area of land where surface water from rain and melting snow or ice converges to a single point at lower elevation, usually the exit of the basin, where the waters join another waterbody. NMDCO_relaxed.owl ENVO:00000304 biolink:NamedThing shore That part of the land in immediate contact with a body of water including the area between high and low water lines. NMDCO_relaxed.owl ENVO:00000305 biolink:NamedThing peninsula A body of land jutting out into and nearly surrounded by water. NMDCO_relaxed.owl ENVO:00000311 biolink:NamedThing kettle A fluvioglacial landform occurring as the result of blocks of ice calving from the front of a receding glacier and becoming partially to wholly buried by glacial outwash. Glacial outwash is generated when sediment laden streams of meltwater flow away from the glacier and are deposited to form broad outwash plains called sandurs. When the ice blocks melt, holes are left in the sandur. NMDCO_relaxed.owl ENVO:00000313 biolink:NamedThing blowout A sandy depression in a sand dune ecosystem (psammosere) caused by the removal of sediments by wind. NMDCO_relaxed.owl ENVO:00000325 biolink:NamedThing polje A large closed depression draining underground, with a flat floor across which there may be an intermittent or perennial stream and which may be liable to flood and become a lake. The floor makes a sharp break with parts of surrounding slopes. NMDCO_relaxed.owl ENVO:00000342 biolink:NamedThing ice cap dome A comparatively elevated area on an icecap. NMDCO_relaxed.owl ENVO:00000410 biolink:NamedThing kipuka An elevated area such as a hill, ridge or old lava dome inside or downslope from an area of active volcanism. New lava flows will cover the surrounding land, isolating the kipuka so that it appears as a (usually) forested island in a barren lava flow. NMDCO_relaxed.owl ENVO:00000413 biolink:NamedThing pingo A mound of earth-covered ice found in the Arctic, subarctic, and Antarctica that can reach up to 70 metres in height and up to 2 kilometres in diameter. NMDCO_relaxed.owl ENVO:00000414 biolink:NamedThing natural arch A natural formation where a rock arch forms, with a natural passageway through underneath. NMDCO_relaxed.owl ENVO:00000419 biolink:NamedThing stack A geological landform consisting of a steep and often vertical column or columns of rock in the sea near a coast. NMDCO_relaxed.owl ENVO:00000421 biolink:NamedThing wave-cut platform The narrow flat area often seen at the base of a sea cliff caused by the action of the waves. NMDCO_relaxed.owl ENVO:00000430 biolink:NamedThing dirt cone A feature of a glacier, in which dirt, which has fallen into a hollow in the ice, forms a coating which insulates the ice below. The surrounding ice melts away, leaving the dirt cone. NMDCO_relaxed.owl ENVO:00000438 biolink:NamedThing alas A steep-sided depression formed by the melting of permafrost; it may contain a lake. NMDCO_relaxed.owl ENVO:00000463 biolink:NamedThing harbour A landform which provides shelter from atmospheric weather and marine currents, waves, and other dynamics. NMDCO_relaxed.owl ENVO:00000496 biolink:NamedThing rill A narrow and shallow incision into soil resulting from erosion by overland flow that has been focused into a thin thread by soil surface roughness. Rilling, the process of rill formation, is common on agricultural land and unvegetated ground. NMDCO_relaxed.owl ENVO:00000508 biolink:NamedThing terrace A step-like feature between higher and lower ground: a relatively flat or gently inclined shelf of earth, backed and fronted by steep slopes or manmade detaining walls. NMDCO_relaxed.owl ENVO:00000516 biolink:NamedThing hummock A patch of ground, distinct from and slightly above the surrounding plain or wetland. Often occurs in groups. NMDCO_relaxed.owl ENVO:00000520 biolink:NamedThing landslide A mound of earth material, at the base of a slope and the associated scoured area. NMDCO_relaxed.owl ENVO:00000524 biolink:NamedThing abandoned watercourse A former stream or distributary no longer carrying flowing water, but still evident due to lakes, wetland, topographic or vegetation patterns. NMDCO_relaxed.owl ENVO:00000526 biolink:NamedThing cliff cleft A deep narrow slot, notch, or groove in a cliff. NMDCO_relaxed.owl ENVO:00000527 biolink:NamedThing interfluve A relatively undissected upland between adjacent stream valleys. NMDCO_relaxed.owl ENVO:00000531 biolink:NamedThing ice cap depression A depression which is part of an ice cap. NMDCO_relaxed.owl ENVO:00000533 biolink:NamedThing landfill A depression which contains objects and materials discarded by humans or their technologies. NMDCO_relaxed.owl ENVO:00000534 biolink:NamedThing riverine pothole NMDCO_relaxed.owl ENVO:00000537 biolink:NamedThing boulder field A high altitude or high latitude bare, flat area covered with large angular rocks. NMDCO_relaxed.owl ENVO:00000538 biolink:NamedThing arrugado An undersea area of subdued corrugations. NMDCO_relaxed.owl ENVO:00000542 biolink:NamedThing kame An irregularly shaped hill or mound composed of sorted or stratified sand and gravel that is deposited in contact with the glacial ice. It can have an irregular shape. Kames are often associated with kettles, and this is referred to as kame and kettle topography. When the ice retreats further, the delta kame often collapses. Kame terraces are frequently found along the side of a glacial valley and are the deposits of meltwater streams flowing between the ice and the adjacent valley side. NMDCO_relaxed.owl ENVO:00000543 biolink:NamedThing swale A depression which comprises a low tract of land, especially when moist or marshy. NMDCO_relaxed.owl ENVO:00000549 biolink:NamedThing container of an intermittent water body A depression which is is periodically filled with water when water supply exceeds evapotranspiration and bed seepage. NMDCO_relaxed.owl ENVO:00000552 biolink:NamedThing talik An area of unfrozen ground surrounded by permafrost. NMDCO_relaxed.owl ENVO:00009686 biolink:NamedThing ice rise An ice rise is an elevation which is part of an ice shelf, typically dome shared, and formed by the ice shelf overriding an obstruction in the seabed. An ice rise may be adjacent only to an ice shelf, or to an ice shelf and a sea. For some features, properly ice rises, the term island has become established through usage. NMDCO_relaxed.owl ENVO:01000255 biolink:NamedThing mineral deposit A mineral deposit is a physiographic feature which has unusually high concentrations of one or more minerals. NMDCO_relaxed.owl ENVO:01000278 biolink:NamedThing pingo scar A depression caused by the collapse of a pingo. NMDCO_relaxed.owl ENVO:01000302 biolink:NamedThing outcrop A portion of environmental material which protrudes through a surface layer. NMDCO_relaxed.owl ENVO:01000450 biolink:NamedThing salt glacier A mass of salt which has erupted onto a planetary surface, usually through sedimentary rock. NMDCO_relaxed.owl ENVO:01000505 biolink:NamedThing salt dome A dome-shaped mass of salt formed when a thick bed of evaporite minerals (mainly salt, or halite) found at depth intrudes vertically into surrounding rock strata, forming a diapir. NMDCO_relaxed.owl ENVO:01000754 biolink:NamedThing fumarole-derived ice tower A hollow tower of ice formed by the freezing of steam escaping a fumarole. NMDCO_relaxed.owl ENVO:01001357 biolink:NamedThing desert A landform which has been rendered barren or partially barren by environmental extremes, especially by low rainfall, and which loses more liquid water by evapotranspiration than is supplied by precipitation. NMDCO_relaxed.owl ENVO:01001467 biolink:NamedThing UNEP-WCMC class 7 mountain An elevated inner basin or plateau surrounded by mountains, but not - itself - a mountain. NMDCO_relaxed.owl ENVO:01001537 biolink:NamedThing sea ice hummock An elevation which is formed by pressure at the point of contact between ice floes, resulting in a conglomeration of broken ice. NMDCO_relaxed.owl ENVO:01001568 biolink:NamedThing frost heave An elevation which is formed as an ice mass forms under soil, resulting in upwards deformation of the land surface. NMDCO_relaxed.owl ENVO:00000014 biolink:NamedThing canal Artificial watercourse with no flow or a controlled flow used for navigation, drainage or irrigation. NMDCO_relaxed.owl ENVO:00000029 biolink:NamedThing watercourse A flowing body of water. NMDCO_relaxed.owl ENVO:00000023 biolink:NamedThing stream A watercourse which is linear and flows across the solid portion of a planetary surface. NMDCO_relaxed.owl ENVO:00000412 biolink:NamedThing tidal watercourse A watercourse which has the intensity and direction of its flow primarily determined by the tides. NMDCO_relaxed.owl ENVO:00000472 biolink:NamedThing backwater An area of calm water unaffected by the current of a stream. NMDCO_relaxed.owl ENVO:00000479 biolink:NamedThing mouth The exit or point of discharge of a stream into another stream, lake or sea. NMDCO_relaxed.owl ENVO:00001996 biolink:NamedThing mine drainage The outflow of water from a mine. NMDCO_relaxed.owl ENVO:00000015 biolink:NamedThing ocean A marine water body which is constitutes the majority of an astronomical body's hydrosphere. NMDCO_relaxed.owl ENVO:00001999 biolink:NamedThing marine water body A lentic water body which is composed primarily of marine water. NMDCO_relaxed.owl ENVO:00000016 biolink:NamedThing sea A large expanse of saline water usually connected with an ocean. NMDCO_relaxed.owl ENVO:02000049 biolink:NamedThing coastal water body Coastal water is a marine water body bordering a coast. NMDCO_relaxed.owl ENVO:01001319 biolink:NamedThing saline water body A body of water which is primarily composed of saline water. NMDCO_relaxed.owl ENVO:00000019 biolink:NamedThing saline lake A lake whose water contains a considerable concentration of dissolved salts. NMDCO_relaxed.owl ENVO:01001321 biolink:NamedThing brackish water body A body of water which is primarily composed of brackish water. NMDCO_relaxed.owl ENVO:00000017 biolink:NamedThing saline hydrographic feature A geographical feature associated with water with a halinity above 30 ppt (roughly 35 g/L). NMDCO_relaxed.owl ENVO:00000104 biolink:NamedThing undersea feature A hydrographic feature which is located below the surface of a marine water body. NMDCO_relaxed.owl ENVO:00000167 biolink:NamedThing bar A linear shoaling landform feature within a body of water. Bars tend to be long and narrow (linear) and develop where a current (or waves) promote deposition of granular material, resulting in localized shallowing (shoaling) of the water. Bars can appear in the sea, in a lake, or in a river. They are typically composed of sand, although could be of any granular matter that the moving water has access to and is capable of shifting around (for example, soil, silt, gravel, cobble, shingle, or even boulders). The grain size of the material comprising a bar is related: to the size of the waves or the strength of the currents moving the material, but the availability of material to be worked by waves and currents is also important. NMDCO_relaxed.owl ENVO:00000168 biolink:NamedThing blowhole A hole in coastal rock through which sea water is forced by a rising tide or waves and spurted through an outlet into the air. NMDCO_relaxed.owl ENVO:00000272 biolink:NamedThing confluence The point where a tributary joins a more major river. NMDCO_relaxed.owl ENVO:00000314 biolink:NamedThing alluvial fan A fan-shaped deposit formed where a fast flowing stream flattens, slows, and spreads typically at the exit of a canyon onto a flatter plain. NMDCO_relaxed.owl ENVO:00000475 biolink:NamedThing inlet An opening of the sea into the land, or of a lake into its shore. NMDCO_relaxed.owl ENVO:01001899 biolink:NamedThing reef NMDCO_relaxed.owl ENVO:03600071 biolink:NamedThing cyanobacterial bloom A feature which arises from a rapid multiplication of cyanobacteria, causing marked visible discoloration of the water. NMDCO_relaxed.owl ENVO:2000004 biolink:NamedThing algal bloom A feature that arises from a rapid increase or accumulation in the population of algae (typically microscopic) in an aquatic system. NMDCO_relaxed.owl ENVO:00000020 biolink:NamedThing lake A body of water or other liquid of considerable size contained in a depression on a landmass. NMDCO_relaxed.owl ENVO:00000021 biolink:NamedThing freshwater lake A lake of whose water contains low concentrations of salts. NMDCO_relaxed.owl ENVO:00000058 biolink:NamedThing underground lake A lake which is formed under the surface of the Earth. Such a lake may be associated with caves and aquifers and springs. NMDCO_relaxed.owl ENVO:00000165 biolink:NamedThing asphalt lake A lake formed of a natural deposit of alphalt, a black, highly viscous liquid or semi-solid composed of fossil hydrocarbons. NMDCO_relaxed.owl ENVO:00000197 biolink:NamedThing endorheic lake A lake from which there is no outflow of water, either on the surface as rivers, or underground by flow or diffusion through rock or permeable material. NMDCO_relaxed.owl ENVO:00000199 biolink:NamedThing meromictic lake A lake which has layers of water which do not intermix. NMDCO_relaxed.owl ENVO:00000201 biolink:NamedThing fjord lake A lake in a glacially eroded valley, which has been eroded below sea level. NMDCO_relaxed.owl ENVO:00000202 biolink:NamedThing oxbow lake A lake which is formed when a wide meander from a stream or a river is cut off to form a lake. They are called oxbow lakes due to the distinctive curved shape that results from this process. NMDCO_relaxed.owl ENVO:00000452 biolink:NamedThing ribbon lake A lake that is long, narrow, and finger-shaped, usually found in a glacial trough. Its formation begins when a glacier moves over an area containing alternate bands of hard and soft bedrock. The sharp-edged boulders carried at the bottom of the glacier erode the softer rock more quickly by abrasion, thus creating a hollow called a rock basin. On either side of the rock basin, the more resistant rock is eroded less and these outcrops of harder rock are known as rock bars, which act as dams between which rainwater may accumulate after the retreat of the ice age, filling up the rock basin and creating a ribbon lake. A ribbon lake may also form behind a terminal or recessional moraine, both of which also act as dams, enabling water to accumulate behind them. A ribbon lake may also occur if a tributary glacier joins a main glacier. The increase in power can create a trough, which is filled with water from a river/meltwater to create a ribbon lake. NMDCO_relaxed.owl ENVO:00000455 biolink:NamedThing tarn A mountain lake that is formed in a cirque excavated by a glacier. A moraine may form a natural dam below a tarn. NMDCO_relaxed.owl ENVO:00000488 biolink:NamedThing glacial lake A lake which is primarily composed of glacial meltwater and which fills a depression formed as a result of a glacial erosion process. NMDCO_relaxed.owl ENVO:01000284 biolink:NamedThing amictic lake A lake which is permanently covered by ice, does not mix, and exhibit inverse cold water stratification whereby water temperature increases with depth below the ice surface. NMDCO_relaxed.owl ENVO:01000285 biolink:NamedThing holomictic lake A holomictic lake is a lake which mixes at least once per year. Mixing is caused by a uniform temperature distribution from the upper to lower layers of the lake. NMDCO_relaxed.owl ENVO:01000548 biolink:NamedThing eutrophic lake A lake which has nutrient-rich water. NMDCO_relaxed.owl ENVO:01000680 biolink:NamedThing polluted lake A lake which has concentrations of environmental contaminants high enough to harm the ecosystems associated with it. NMDCO_relaxed.owl ENVO:01000774 biolink:NamedThing oligotrophic lake A lake which has nutrient-poor water. NMDCO_relaxed.owl ENVO:01000775 biolink:NamedThing mesotrophic lake A lake with medium nutrient levels, which allow moderate productivity. NMDCO_relaxed.owl ENVO:01000824 biolink:NamedThing exorheic lake A lake from which water constantly flows out of under almost all climatic circumstances, maintaining low concentrations of dissolved solid relative to endorheic lakes. NMDCO_relaxed.owl ENVO:01001021 biolink:NamedThing humic lake A lake which is composed primarily water with high concentrations of humic substances and organic acids, resulting in brown- or tea-coloured colouration. NMDCO_relaxed.owl ENVO:01001022 biolink:NamedThing natural lake A lake which has formed as the result of processes that are not or are only minimally driven by human activity. NMDCO_relaxed.owl ENVO:01001062 biolink:NamedThing crater lake A lake contained within a crater. NMDCO_relaxed.owl ENVO:01001070 biolink:NamedThing impact crater lake A lake which is contained in a crater formed by an impact event. NMDCO_relaxed.owl ENVO:01001072 biolink:NamedThing anoxic lake A lake which is primarily composed of anoxic water. NMDCO_relaxed.owl ENVO:01001073 biolink:NamedThing lake with an anoxic hypolimnion A lake which has a hypolimnion composed primarily of anoxic water. NMDCO_relaxed.owl ENVO:01001074 biolink:NamedThing lake with a hypoxic hypolimnion A lake which has a hypolimnion composed primarily of hypoxic water. NMDCO_relaxed.owl ENVO:01001075 biolink:NamedThing hypoxic lake A lake which is primarily composed of hypoxic water. NMDCO_relaxed.owl ENVO:01001076 biolink:NamedThing oxic lake A lake which is primarily composed of oxic water. NMDCO_relaxed.owl ENVO:01001077 biolink:NamedThing lake with an oxic hypolimnion A lake which has a hypolimnion composed primarily of oxic water. NMDCO_relaxed.owl ENVO:01001092 biolink:NamedThing tectonic lake A lake which is contained in a depression formed by the deformation and resulting lateral and vertical movements of a lithosphere. NMDCO_relaxed.owl ENVO:01001105 biolink:NamedThing aeolian lake A lake which fills a basin that has been dammed by wind-blown sand, formed between sand dunes oriented by winds; or formed by wind action under previously arid paleoenvironments. NMDCO_relaxed.owl ENVO:01001106 biolink:NamedThing landslide lake A lake which fills a depression where drainage is blocked by solid material transported by a landslide. NMDCO_relaxed.owl ENVO:03000035 biolink:NamedThing supraglacial lake A water body which is located in a depression within the surface of a glacier. NMDCO_relaxed.owl ENVO:03000053 biolink:NamedThing intraglacial lake A lake which is comprised of meltwater located underneath or within a glacier. NMDCO_relaxed.owl ENVO:03600041 biolink:NamedThing marine lake A lake which is connected to a marine water body via tunnels or cracks in the soil. NMDCO_relaxed.owl ENVO:01000617 biolink:NamedThing lentic water body A lentic water body is a water body in which the accumulated water, in its totality, has very little to no directed flow. NMDCO_relaxed.owl ENVO:00000033 biolink:NamedThing pond A body of water, usually of smaller size than a lake. NMDCO_relaxed.owl ENVO:00000056 biolink:NamedThing fishpond A pond or lake used for the artificial culture of fish. NMDCO_relaxed.owl ENVO:00000317 biolink:NamedThing tidal pool Pools formed as a high tide comes in over a rocky shore. Water fills depressions in the ground, which turn into isolated pools as the tide retreats. NMDCO_relaxed.owl ENVO:00000369 biolink:NamedThing brine pool MERGED DEFINITION: TARGET DEFINITION: A large area of brine on the ocean basin near cold seep vents which release methane into the water. These pools are concentrations of water having an extremely high salinity as compared to the surrounding ocean, caused by the motion of large salt deposits through salt tectonics. -------------------- SOURCE DEFINITION: Marine brine pools are large areas of brine on the ocean basin. These pools are bodies of water that have a salinity three to five times greater than the surrounding ocean. For deep-sea brine pools the source of the salt is the dissolution of large salt deposits through salt tectonics. The brine often contains high concentrations of methane, providing energy to chemosynthetic animals that live near the pool. NMDCO_relaxed.owl ENVO:00000453 biolink:NamedThing liman A lake or estuary that is formed at the mouth of a river where flow is blocked by a bar of sediments. It can be maritime (the bar being created by the current of a sea) or fluvial (the bar being created by the flow of a bigger river at the confluence). NMDCO_relaxed.owl ENVO:01000871 biolink:NamedThing puddle of water A puddle is a small accumulation of water, on a surface. It can form either by pooling in a depression on the surface, or by surface tension upon a flat surface. NMDCO_relaxed.owl ENVO:01000905 biolink:NamedThing shrimp pond A lentic water body which is used for the artificial culture of shrimp. NMDCO_relaxed.owl ENVO:01001320 biolink:NamedThing fresh water body A body of water which is primarily composed of freshwater, with low solute content. NMDCO_relaxed.owl ENVO:00000022 biolink:NamedThing river A stream which, through permanent or seasonal flow processes, moves from elevated land towards lower elevations through a definite channel and empties either into a sea, lake, or another river or ends on land as bed seepage and evapotranspiration exceed water supply. NMDCO_relaxed.owl ENVO:00000060 biolink:NamedThing underground stream A stream that is under the surface of the Earth. NMDCO_relaxed.owl ENVO:00000069 biolink:NamedThing distributary A stream that branches off and flows away from a main stream channel. They are a common feature of river deltas. NMDCO_relaxed.owl ENVO:00000152 biolink:NamedThing anabranch A section of a river or stream that diverts from the main course and rejoins later. NMDCO_relaxed.owl ENVO:00000234 biolink:NamedThing bayou A small, slow-moving stream or creek; usually located in low-lying areas. NMDCO_relaxed.owl ENVO:00000490 biolink:NamedThing consequent stream A stream whose course is a direct consequence of the original slope of the surface upon which it developed, i.e., a stream that follows the slope of the original land. NMDCO_relaxed.owl ENVO:00000491 biolink:NamedThing subsequent stream A stream whose course has been determined by selective headward erosion along weak strata. These streams have generally developed after the original stream. Subsequent streams developed independently of the original relief of the land and generally follow paths determined by the weak rock belts. NMDCO_relaxed.owl ENVO:00000492 biolink:NamedThing resequent stream A stream whose course follows the original relief, but at a lower level than the original slope (e.g., flows down a course determined by the underlying strata in the same direction). These streams develop later and are generally a tributary to a subsequent stream. NMDCO_relaxed.owl ENVO:00000493 biolink:NamedThing obsequent stream A stream flowing in the opposite direction of the consequent drainage. NMDCO_relaxed.owl ENVO:00000494 biolink:NamedThing insequent stream A stream that has an almost random drainage often forming dendritic patterns. These are typically tributaries and have developed by a headward erosion on a horizontally stratified belt or on homogeneous rocks. These streams follow courses that apparently were not controlled by the original slope of the surface, its structure or the type of rock. NMDCO_relaxed.owl ENVO:00000495 biolink:NamedThing tributary A stream or river which flows into another river (a parent river) or body of water but which may not flow directly into the sea. NMDCO_relaxed.owl ENVO:00000517 biolink:NamedThing lost stream A surface stream that disappears into an underground channel, or dries up in an arid area. NMDCO_relaxed.owl ENVO:00000525 biolink:NamedThing canalized stream A stream that has been substantially ditched, diked, or straightened. NMDCO_relaxed.owl ENVO:03000018 biolink:NamedThing englacial stream A stream which is primarily composed of meltwater and which flows within a glacier or ice sheet. NMDCO_relaxed.owl ENVO:03605007 biolink:NamedThing freshwater stream A stream which is composed primarily of fresh water. NMDCO_relaxed.owl ENVO:00000025 biolink:NamedThing reservoir An artificial body of water, often contained by a dam, constructed for the purpose of water storage. NMDCO_relaxed.owl ENVO:00000451 biolink:NamedThing amenity lake A lake constructed, or modified, for the chief purpose of providing an amenity. NMDCO_relaxed.owl ENVO:00000028 biolink:NamedThing sand pit quarry A quarry from which sand is extracted. NMDCO_relaxed.owl ENVO:00000284 biolink:NamedThing quarry An open-pit mine from which rock or minerals are extracted. NMDCO_relaxed.owl ENVO:00000473 biolink:NamedThing gravel pit A quarry from which gravel is extracted. NMDCO_relaxed.owl ENVO:01000618 biolink:NamedThing lotic water body A lotic water body is a water body in which the accumulated water, in its totality, is flowing. NMDCO_relaxed.owl ENVO:00000040 biolink:NamedThing waterfall A sudden descent of water over a step or ledge in the bed of a river. NMDCO_relaxed.owl ENVO:00000031 biolink:NamedThing wadi A valley or ravine, bounded by relatively steep banks, which in the rainy season becomes a watercourse. NMDCO_relaxed.owl ENVO:00000100 biolink:NamedThing valley A depression which has been formed as a result of erosion by water or ice and which is low-lying, bordered by higher ground, and especially elongate. NMDCO_relaxed.owl ENVO:00000128 biolink:NamedThing dry valley A valley which no longer has water flowing or accumulating over its surface. NMDCO_relaxed.owl ENVO:00000129 biolink:NamedThing stream valley A valley that contains, and has been formed by, a stream. NMDCO_relaxed.owl ENVO:00000169 biolink:NamedThing canyon Relatively narrow, deep depression with steep sides, the bottom of which generally has a continuous slope. NMDCO_relaxed.owl ENVO:00000248 biolink:NamedThing glacial valley A valley that contains, or contained, a glacier and was formed by glacial activity. Typically U-shaped in cross-section. NMDCO_relaxed.owl ENVO:00000302 biolink:NamedThing rift valley A valley created by the formation of a rift, i.e. place where a planet's lithosphere is being pulled apart by tectonic forces. NMDCO_relaxed.owl ENVO:00000308 biolink:NamedThing dune slack A valley or trough between two dunes. NMDCO_relaxed.owl ENVO:00000418 biolink:NamedThing ria A submergent coastal landform that forms where sea levels rise relative to the land either as a result of eustatic sea level change; where the global sea levels rise or isostatic sea level change; where the land sinks. When this happens valleys which were previously at sea level become submerged. NMDCO_relaxed.owl ENVO:00000439 biolink:NamedThing dell A small wooded valley, either U- or V-shaped. NMDCO_relaxed.owl ENVO:00000567 biolink:NamedThing calanque A deep valley with steep sides, typically of limestone, in part submerged by the sea. NMDCO_relaxed.owl ENVO:01000446 biolink:NamedThing ravine A ravine is a small, narrow, steep-sided valley that is larger than a gully and smaller than a canyon and that is usually worn by running water. NMDCO_relaxed.owl ENVO:00000032 biolink:NamedThing bay An area of water bordered by land on three sides. NMDCO_relaxed.owl ENVO:00000137 biolink:NamedThing coastal inlet An opening of the sea into the land. NMDCO_relaxed.owl ENVO:00000039 biolink:NamedThing fjord A long and narrow sea inlet with high steeply sloped walled sides. A fjord is a landform created during a period of glaciation. NMDCO_relaxed.owl ENVO:00000138 biolink:NamedThing cove A circular or round inlet with a narrow entrance. NMDCO_relaxed.owl ENVO:00000393 biolink:NamedThing sound A large sea or ocean inlet larger than a bay, deeper than a bight, wider than a fjord, or it may identify a narrow sea or ocean channel between two bodies of land. NMDCO_relaxed.owl ENVO:00000034 biolink:NamedThing rapids An area of broken, fast flowing water in a stream, where the slope of the bed increases (but without a prominent break of slope which might result in a waterfall), or where a gently dipping bar of harder rock outcrops. NMDCO_relaxed.owl ENVO:01001308 biolink:NamedThing hydroform A liquid astronomical body part which is primarily composed of a continuous volume of liquid water and is held in shape or sustained by an environmental process. NMDCO_relaxed.owl ENVO:00000385 biolink:NamedThing stream mouth The place where a stream discharges into a lagoon, lake, or the sea. NMDCO_relaxed.owl ENVO:00000483 biolink:NamedThing plunge pool A hollow eroded by the force of the falling water at the base of a waterfall, particularly by the eddying effect. NMDCO_relaxed.owl ENVO:01000065 biolink:NamedThing marine oxygen minimum zone A marine water mass which is characterized by having much lower than normal dissolved oxygen concentrations persistently. NMDCO_relaxed.owl ENVO:01000077 biolink:NamedThing marine pycnocline A pycnocline which is part of a marine water body and composed primarily of sea water. NMDCO_relaxed.owl ENVO:01000080 biolink:NamedThing pelagic isothermal surface A roughly planar, pelagic region characterised by equal water temperature. NMDCO_relaxed.owl ENVO:01000081 biolink:NamedThing pelagic isohaline surface A roughly planar, pelagic region characterised by equal salinity. NMDCO_relaxed.owl ENVO:01000083 biolink:NamedThing pelagic isopycnal surface A roughly planar, pelagic region characterised by equal water density. NMDCO_relaxed.owl ENVO:01000130 biolink:NamedThing marine hydrothermal plume A marine hydrothermal vent plume, part of a marine hydrothermal vent, is a high temperature water jet laden with dissolved metals and minerals that is driven by heat generated due to tectonic activity below the vent. NMDCO_relaxed.owl ENVO:01000283 biolink:NamedThing lake layer A layer which is part of a lake. NMDCO_relaxed.owl ENVO:01000295 biolink:NamedThing marine layer A layer that is part of a marine water body. NMDCO_relaxed.owl ENVO:01000862 biolink:NamedThing turbulent aquatic surface layer A turbulent surface layer of a water body maintained by strong currents setting over submerged ridges or shoals or by winds opposing a current. NMDCO_relaxed.owl ENVO:01001256 biolink:NamedThing coastal shrimp pond A shrimp pond which is embedded in a coastal water body. NMDCO_relaxed.owl ENVO:01001301 biolink:NamedThing aquatic estuarine layer A layer of liquid that is part of an estuary. NMDCO_relaxed.owl ENVO:01001554 biolink:NamedThing surface layer of a water body A water surface that is part of a water body. NMDCO_relaxed.owl ENVO:01001607 biolink:NamedThing water current A hydroform which is maintained by a continuous, directed movement of water, generated by disequilibria in a water mass. NMDCO_relaxed.owl ENVO:03600094 biolink:NamedThing stream pool A water body which is created in a stream by local scour or impoundment and has some structural control. NMDCO_relaxed.owl ENVO:03600095 biolink:NamedThing stream run A hydroform which is that part of a stream where water flows swiftly and uniformly with low surface water agitation. NMDCO_relaxed.owl ENVO:00000035 biolink:NamedThing marsh A wetland ecosystem which includes communities of grasses, rushes, reeds, typhas, sedges, and other herbaceous plants (possibly with low-growing woody plants). NMDCO_relaxed.owl ENVO:01001209 biolink:NamedThing wetland ecosystem A terrestrial ecosystem which is inundated or saturated by surface or ground water at a frequency and duration sufficient to support, and that under normal circumstances does support, a prevalence of vegetation typically adapted for life in saturated soil conditions. NMDCO_relaxed.owl ENVO:00000044 biolink:NamedThing peatland A wetland ecosystem which accumulates acidic peat, a deposit of dead plant material. NMDCO_relaxed.owl ENVO:00000230 biolink:NamedThing coastal wetland ecosystem A wetland ecosystem which overlaps both terrestrial and marine ecosystems. NMDCO_relaxed.owl ENVO:00000233 biolink:NamedThing swamp ecosystem A wetland ecosystem in which land mass is permanently inundated by shallow bodies of water, generally with a substantial number of hummocks, or dry-land protrusions. NMDCO_relaxed.owl ENVO:00000240 biolink:NamedThing saline wetland A wetland ecosystem in which soil is saturated with saline water. NMDCO_relaxed.owl ENVO:00000243 biolink:NamedThing freshwater wetland ecosystem A wetland which is inundated with water that contains low concentrations of salts. NMDCO_relaxed.owl ENVO:00000389 biolink:NamedThing intermittent wetland A wetland ecosystem which is sometimes inundated or saturated by surface or ground water sufficient to support, and that under normal circumstances do support, a prevalence of vegetation typically adapted for life in saturated soil conditions. NMDCO_relaxed.owl ENVO:00000036 biolink:NamedThing irrigation canal Artificial watercourse with no flow or a controlled flow used irrigation. NMDCO_relaxed.owl ENVO:00000042 biolink:NamedThing drainage canal Artificial watercourse with no flow or a controlled flow used drainage. NMDCO_relaxed.owl ENVO:00000048 biolink:NamedThing navigation canal Artificial watercourse with no flow or a controlled flow used navigation. NMDCO_relaxed.owl ENVO:00000072 biolink:NamedThing aquaduct Structure designed to transport water from a remote source, usually by gravity. NMDCO_relaxed.owl ENVO:00000079 biolink:NamedThing flume An open artificial water channel, that leads water from a diversion dam or weir completely aside a natural flow, often an elevated box structure (typically wood) that follows the natural contours of the land. NMDCO_relaxed.owl ENVO:00000037 biolink:NamedThing ditch A small, human-made channel which has been dug for draining or irrigating the land. NMDCO_relaxed.owl ENVO:00000544 biolink:NamedThing leat A man-made watercourse, or makeshift aqueduct, often an artificial channel which supplies water to a watermill or its mill pond, collecting water from upstream of the mill so that the natural level of the driving water is above the level of the stream at the mill. Alternatively to may deliver water for mineral washing and concentration, irrigation or to a dye works. NMDCO_relaxed.owl ENVO:01000924 biolink:NamedThing plumbing drain An artificial channel which transports unwanted water or waste liquids away from their source, either to a more useful area, a receptacle, or into sewers or stormwater mains as waste discharge to be released or processed. NMDCO_relaxed.owl ENVO:00000038 biolink:NamedThing lagoon A sheet of saline water separated from the open sea by sand or shingle banks. The sheet of water between an offshore reef, especially of coral and mainland. The sheet of water within a ring or horseshoe shaped atoll. NMDCO_relaxed.owl ENVO:01000325 biolink:NamedThing aquatic layer A layer in a water mass, itself composed primarily of water. NMDCO_relaxed.owl ENVO:01000326 biolink:NamedThing deep chlorophyll maximum layer A subsurface layer in a water body, typically an ocean or lake, in which chlorophyll concentrations reach their maximum. NMDCO_relaxed.owl ENVO:01001191 biolink:NamedThing water surface The surface layer of a volume of water. NMDCO_relaxed.owl ENVO:01001193 biolink:NamedThing water-based planetary surface NMDCO_relaxed.owl ENVO:00000041 biolink:NamedThing tidal creek A tidal water channel. Creeks may often dry to a muddy channel with little or no flow at low tide, but often with significant depth of water at high tide. NMDCO_relaxed.owl ENVO:00000043 biolink:NamedThing wetland area An vegetated area which overlaps a wetland ecosystem. NMDCO_relaxed.owl ENVO:01001305 biolink:NamedThing vegetated area A vegetated area is a geographic feature which has ground cover dominated by plant communities. NMDCO_relaxed.owl ENVO:00000106 biolink:NamedThing grassland area An area in which grasses (Graminae) are a significant component of the vegetation. NMDCO_relaxed.owl ENVO:00000107 biolink:NamedThing heath An upland moor or sandy area dominated by low shrubby vegetation including heather. NMDCO_relaxed.owl ENVO:00000109 biolink:NamedThing woodland area Land having a cover of trees, shrubs, or both. NMDCO_relaxed.owl ENVO:00000112 biolink:NamedThing area of tundra A vegetated area which is part of a tundra ecosystem. NMDCO_relaxed.owl ENVO:00000300 biolink:NamedThing scrubland area Area covered with low-growing or stunted perennial vegetation and usually not mixed with trees. NMDCO_relaxed.owl ENVO:01000843 biolink:NamedThing area of evergreen forest An area of a planet's surface which is primarily covered by a forest in which the majority of trees maintain their foliage despite seasonal change. The surfaces of this area (including the surface of the forest canopy) are in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000848 biolink:NamedThing flower strip A vegetated area which includes a community of flowering plants that provide food for local pollinators. NMDCO_relaxed.owl ENVO:01000855 biolink:NamedThing area of mixed forest An area of a planet's surface which is primarily covered by a forest in which the trees are a mixture between those that lose and retain their foliage despite seasonal change. The surfaces of this area (including the surface of the forest canopy) are in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000887 biolink:NamedThing area of sedge- and forb-dominated herbaceous vegetation An area of a planet's surface which is primarily covered by sedges or forbs, possibly interpersed with grasses or grass-like plants. This area is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000889 biolink:NamedThing area of lichen-dominated vegetation An area of a planet's surface which is primarily covered by fruticose or foliose lichens and which is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000890 biolink:NamedThing area of moss-dominated vegetation An area of a planet's surface which is primarily covered by mosses and which is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000892 biolink:NamedThing area of cropland An area of a planet's surface which is partly covered either by annual crops and perennial woody crops or by actively tilled land. This area is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01001293 biolink:NamedThing bush area A vegetated area which has not been cleared or is sparsely settled, usually scrub-covered or forested NMDCO_relaxed.owl ENVO:01001304 biolink:NamedThing oasis An oasis is a vegetated area located in a desert, supplied with water from a water source which it surrounds, and surrounded by arid soil, sand, or rock. NMDCO_relaxed.owl ENVO:00000045 biolink:NamedThing estuary A semi-enclosed coastal body of water with one or more rivers or streams flowing into it, and with a free connection to the open sea. NMDCO_relaxed.owl ENVO:00000063 biolink:NamedThing water body An accumulation of water of varying size. NMDCO_relaxed.owl ENVO:00000061 biolink:NamedThing underground water body A geographical feature associated with water that is under the surface of the earth. NMDCO_relaxed.owl ENVO:01000710 biolink:NamedThing flood An unusual accumulation of water above the ground caused by high tide, heavy rain, melting snow or rapid runoff from paved areas. NMDCO_relaxed.owl ENVO:03000040 biolink:NamedThing melt pond A water body which forms as a result of localised melting taking place on the surface of a glacier or a mass of sea ice and which is contained in the cavity formed by such melting. NMDCO_relaxed.owl ENVO:00000050 biolink:NamedThing geyser A hot spring that erupts periodically, ejecting a column of hot water and steam into the air. NMDCO_relaxed.owl ENVO:00000051 biolink:NamedThing hot spring A spring through which groundwater, heated by geothermal energy, flows. NMDCO_relaxed.owl ENVO:00002119 biolink:NamedThing alkaline hot spring A alkaline spring through which groundwater, heated by geothermal energy, flows. NMDCO_relaxed.owl ENVO:00002120 biolink:NamedThing acidic hot spring An acidic spring through which groundwater, heated by geothermal energy, flows. NMDCO_relaxed.owl ENVO:00002181 biolink:NamedThing neutral hot spring A neutral spring through which groundwater, heated by geothermal energy, flows. NMDCO_relaxed.owl ENVO:00000125 biolink:NamedThing mineral spring A spring which water contains a significant amount of dissolved minerals, that derive from the rocks through which the water flows. NMDCO_relaxed.owl ENVO:00000204 biolink:NamedThing ephemeral spring A spring through which fluid intermittently flows. NMDCO_relaxed.owl ENVO:00000205 biolink:NamedThing permanent spring A spring whose flow is continuous. NMDCO_relaxed.owl ENVO:00000215 biolink:NamedThing hydrothermal vent A fissure in the Earths's surface from which geothermally heated water issues. NMDCO_relaxed.owl ENVO:01000262 biolink:NamedThing seep A seep is a spring in which water has filtered through permeable earth to the surface. NMDCO_relaxed.owl ENVO:01000598 biolink:NamedThing freshwater spring A spring through which fresh water flows. NMDCO_relaxed.owl ENVO:01001897 biolink:NamedThing neutral spring A spring through which water with a neutral pH flows. NMDCO_relaxed.owl ENVO:01001898 biolink:NamedThing acidic spring A spring through which water with a low pH flows. NMDCO_relaxed.owl ENVO:00000052 biolink:NamedThing volcanic crater lake A lake contained within a volcanic crater. NMDCO_relaxed.owl ENVO:00000053 biolink:NamedThing freshwater marsh A marsh in which soils are saturated with water that contains low concentrations of salts. NMDCO_relaxed.owl ENVO:00000054 biolink:NamedThing saline marsh A marsh whose water contains a considerable quantity of dissolved salts. NMDCO_relaxed.owl ENVO:00000055 biolink:NamedThing saline evaporation pond A pond which is 1) shallow, 2) man-made, and 3) designed to produce salt from seawater through evaporation. NMDCO_relaxed.owl ENVO:00000270 biolink:NamedThing beaver pond A pond that has formed as a consequence of the activities of beavers, building a beaver dam. NMDCO_relaxed.owl ENVO:00000541 biolink:NamedThing brackish pond A pond which is composed primarily of brackish water. NMDCO_relaxed.owl ENVO:00000547 biolink:NamedThing waterhole A pond, often temporary or seasonal, used as a drinking place by mammals and birds. NMDCO_relaxed.owl ENVO:01000368 biolink:NamedThing anchialine pool An anchialine pool is a landlocked water body with a subterranean connection to the ocean and which has fresh water towards its surface with saline water in its deeper layers. NMDCO_relaxed.owl ENVO:03600037 biolink:NamedThing eutrophic pond A pond which has nutrient-rich water. NMDCO_relaxed.owl ENVO:03600043 biolink:NamedThing meromictic pond A pond which has layers of water that do not intermix. NMDCO_relaxed.owl ENVO:03600092 biolink:NamedThing artificial pond A pond which has been constructed by humans or their technologies. NMDCO_relaxed.owl ENVO:00000057 biolink:NamedThing mangrove swamp A swamp which is located in tropical or subtropical environments and is determined by communities of trees and shrubs growing saline coastal environments. NMDCO_relaxed.owl ENVO:00000192 biolink:NamedThing mudflat A wetland that forms when mud is deposited by the tides, rivers, sea or oceans. NMDCO_relaxed.owl ENVO:00000505 biolink:NamedThing underground irrigation canal A gently inclined underground tunnel bringing water for irrigation from an aquifer. NMDCO_relaxed.owl ENVO:00000059 biolink:NamedThing underground river A river that is under the surface of the Earth. NMDCO_relaxed.owl ENVO:01000297 biolink:NamedThing freshwater river A river where fresh water flows. NMDCO_relaxed.owl ENVO:01000908 biolink:NamedThing geothermally heated river A river which is heated by geothermal processes such as heat exchange with lava or hydrothermal percolation. NMDCO_relaxed.owl ENVO:03600015 biolink:NamedThing polluted river A river which has elevated levels of contaminants. NMDCO_relaxed.owl ENVO:00000062 biolink:NamedThing populated place Place or area with clustered or scattered buildings and a permanent human population. NMDCO_relaxed.owl ENVO:01000408 biolink:NamedThing environmental zone A site which has its extent determined by the presence or influence of one or more components of an environmental system or the processes occurring therein. NMDCO_relaxed.owl ENVO:00002178 biolink:NamedThing iron-reducing zone of petroleum contaminated sediment A zone within a portion of petroleum contaminated sediment within which iron-reducing processes occur. NMDCO_relaxed.owl ENVO:01001098 biolink:NamedThing tectonic plate boundary A geomorphological feature which is formed where two or more tectonic plates move towards, away from, or along one another, resulting in deformation of the lithosphere. NMDCO_relaxed.owl ENVO:01001299 biolink:NamedThing atmospheric zone An environmental zone which is part of an atmosphere. NMDCO_relaxed.owl ENVO:01001348 biolink:NamedThing material accumulation zone A zone in which the deposition and accumulation of an environmental material occurs. NMDCO_relaxed.owl ENVO:01001349 biolink:NamedThing material decumulation zone A zone in which processes resulting in the removal of one or more environmental materials have higher rates than pocesses which result in their deposition and accumulation. NMDCO_relaxed.owl ENVO:01001353 biolink:NamedThing environmental zone of processual equilibrium An environmental zone in which the rates of two or more processes are roughly equal to one another. NMDCO_relaxed.owl ENVO:01001355 biolink:NamedThing crater zone The site which is located in a crater. NMDCO_relaxed.owl ENVO:01000685 biolink:NamedThing water mass A mass of water. NMDCO_relaxed.owl ENVO:01000686 biolink:NamedThing marine water mass A mass of marine water. NMDCO_relaxed.owl ENVO:00000064 biolink:NamedThing road An open way for the passage of vehicles, persons, or animals on land. NMDCO_relaxed.owl ENVO:01001272 biolink:NamedThing constructed pavement A construction which comprises a durable surface layer overlying a solid surface intended to sustain vehicular or foot traffic. NMDCO_relaxed.owl ENVO:01001279 biolink:NamedThing sidewalk A constructed pavement which is built on the side of a road and intended for foot traffic. NMDCO_relaxed.owl ENVO:01001281 biolink:NamedThing paved parking lot A constructed pavement which is used for parking vehicles. NMDCO_relaxed.owl ENVO:03500004 biolink:NamedThing bike path A constructed pavement which is intended for bicycle traffic NMDCO_relaxed.owl ENVO:00000065 biolink:NamedThing railway A permanent way having one or more rails which provides a track for cars. NMDCO_relaxed.owl ENVO:00000075 biolink:NamedThing bridge A built structure erected over a depression or obstacle to carry traffic or some facility such as a pipeline. NMDCO_relaxed.owl ENVO:00000158 biolink:NamedThing causeway A road or railway elevated by a bank, usually across a broad body of water or wetland. NMDCO_relaxed.owl ENVO:00000357 biolink:NamedThing lock A device for raising and lowering boats between stretches of water of different levels on river and canal waterways. The distinguishing feature of a lock is a fixed chamber whose water level can be varied. NMDCO_relaxed.owl ENVO:00000411 biolink:NamedThing ford The shallow part of a stream which can be easily crossed. NMDCO_relaxed.owl ENVO:00000563 biolink:NamedThing pier A raised walkway over water, supported by piles or pillars. NMDCO_relaxed.owl ENVO:03501282 biolink:NamedThing hangar A transport feature consisting of a closed building structure to hold aircraft or spacecraft. NMDCO_relaxed.owl ENVO:00000066 biolink:NamedThing man-made tunnel A tunnel constructed by human means. NMDCO_relaxed.owl ENVO:00000068 biolink:NamedThing tunnel An underground or underwater passage. NMDCO_relaxed.owl ENVO:01000429 biolink:NamedThing burrow A burrow is a hole or tunnel excavated into the ground by an animal to create a space suitable for habitation, temporary refuge, or as a byproduct of locomotion NMDCO_relaxed.owl ENVO:03000117 biolink:NamedThing channel A structure which traverses a mass of one or more environmental materials, and encloses a roughly tubular site. NMDCO_relaxed.owl ENVO:01001111 biolink:NamedThing fossil worm burrow A channel which was formed as a result of an annelid burrowing through soil, where organic residues lining the burrow have subsequently initiated fossilization. NMDCO_relaxed.owl ENVO:03000041 biolink:NamedThing brine channel A channel through which brine flows. NMDCO_relaxed.owl ENVO:03000048 biolink:NamedThing thaw hole A channel which traverses an ice mass floating on a water body and bridges the atmosphere to the underlying water through its internal cavity. NMDCO_relaxed.owl ENVO:00005803 biolink:NamedThing animal habitation The dwelling of an animal or group of similar animals. NMDCO_relaxed.owl ENVO:00000074 biolink:NamedThing dam A barrier constructed across a watercourse to control the flow or raise the level of water. NMDCO_relaxed.owl ENVO:01000466 biolink:NamedThing boundary wall A boundary wall is a constructed barrier which is usually opaque, constructed from masonry, and of greater structural strength than a fence. NMDCO_relaxed.owl ENVO:01000468 biolink:NamedThing fence A fence is a constructed barrier which is generally of lighter construction than a wall and used to provide visual sectioning of spaces. NMDCO_relaxed.owl ENVO:00000077 biolink:NamedThing agricultural ecosystem NMDCO_relaxed.owl ENVO:01001828 biolink:NamedThing anthropised ecosystem An ecosystem which is formed as a result of human activity or impact. NMDCO_relaxed.owl ENVO:01000219 biolink:NamedThing anthropogenic terrestrial biome An anthropogenic terrestrial biome is a terrestrial biome which has community structures determined by human activity. NMDCO_relaxed.owl ENVO:01001244 biolink:NamedThing cropland ecosystem An ecosystem which 1) is determined by communities of annual crops, perennial woody crops, or by actively tilled land, 2) is primarily used for agricultural activity, and 3) contains no village or larger human settlement. NMDCO_relaxed.owl ENVO:00000078 biolink:NamedThing farm An area of land which is used for the cultivation of crops or grazing of livestock, including any agricultural constructions therein. NMDCO_relaxed.owl ENVO:00000266 biolink:NamedThing pasture A grassland ecosystem which is used for grazing of ungulate livestock as part of a farm or ranch. NMDCO_relaxed.owl ENVO:00000294 biolink:NamedThing fish farm A facility in which fish are raised commercially in tanks or enclosures, usually for food. NMDCO_relaxed.owl ENVO:00000519 biolink:NamedThing agricultural terrace A terrace which is used for agricultural activities. NMDCO_relaxed.owl ENVO:01000576 biolink:NamedThing apiary An apiary is a place where beehives of honey bees are kept and maintained by beekeepers. NMDCO_relaxed.owl ENVO:01000627 biolink:NamedThing feedlot A feedlot is a plot of land on which livestock are fattened for market NMDCO_relaxed.owl ENVO:01001114 biolink:NamedThing feed storage space A physical space, which may or may not be in a construction, which is used to store animal feed for agricultural purposes. NMDCO_relaxed.owl ENVO:01001115 biolink:NamedThing manure storage space A physical space, which may or may not be in a construction, which is used to store animal manure for agricultural purposes. NMDCO_relaxed.owl ENVO:03600074 biolink:NamedThing aquaculture farm An agricultural aquatic ecosystem in which fish, crustaceans, mollusks, aquatic plants and algae are cultivated. NMDCO_relaxed.owl ENVO:00000080 biolink:NamedThing mountain range A range of mounts which is dominated by mountains. NMDCO_relaxed.owl ENVO:00000478 biolink:NamedThing range of mounts A field which includes at least two mounts connected by high ground and arranged in an approximately linear fashion. NMDCO_relaxed.owl ENVO:00000082 biolink:NamedThing hill range A range of mounts which is dominated by hills. NMDCO_relaxed.owl ENVO:00000081 biolink:NamedThing mountain A landform that extends above the surrounding terrain in a limited area. NMDCO_relaxed.owl ENVO:00000477 biolink:NamedThing mount A mountain or a hill. NMDCO_relaxed.owl ENVO:00000083 biolink:NamedThing hill A rounded elevation of limited extent rising above the surrounding land with local relief of less than 300m. NMDCO_relaxed.owl ENVO:00000180 biolink:NamedThing mound A rounded elevated area. NMDCO_relaxed.owl ENVO:00000432 biolink:NamedThing monadnock An isolated hill, knob, ridge, or small mountain that rises abruptly from a gently sloping or virtually level surrounding plain. NMDCO_relaxed.owl ENVO:00000085 biolink:NamedThing alpine glacier A glacier contained in the site of a mountain valley. NMDCO_relaxed.owl ENVO:00000133 biolink:NamedThing glacier An ice mass which is of sufficient mass that the action of gravity upon it overcomes the frictional forces holding it in place, causing it to deform and flow towards lower elevation. NMDCO_relaxed.owl ENVO:00000132 biolink:NamedThing ice sheet A glacier which covers an area of greater than 50,000 square kilometers. NMDCO_relaxed.owl ENVO:00000456 biolink:NamedThing tidewater glacier A glacier which terminates in a lake or the sea, with terminus either floating or grounded NMDCO_relaxed.owl ENVO:00000457 biolink:NamedThing plateau glacier A glacier on a plateau or high area, smaller than an ice sheet. NMDCO_relaxed.owl ENVO:00000458 biolink:NamedThing valley glacier A glacier which 1) flows for all or most of its length within the walls of a valley, in consequence having a distinct tongue and a well-defined outline and 2) descends from either high mountains, from an ice cap on a plateau, or from an ice sheet. NMDCO_relaxed.owl ENVO:00000459 biolink:NamedThing outlet glacier A glacier fed by an ice sheet. NMDCO_relaxed.owl ENVO:00009725 biolink:NamedThing ice piedmont A glacier covering a coastal strip of low-lying land backed by mountains, and sloping gently seaward over a distance up to 30km or more to terminate in ice cliffs or to merge with an ice shelf. NMDCO_relaxed.owl ENVO:01001354 biolink:NamedThing volcanic crater glacier A glacier which is contained in the site bounded by a volcanic crater. NMDCO_relaxed.owl ENVO:01001541 biolink:NamedThing tributary glacier A glacier which flows into a larger glacier. NMDCO_relaxed.owl ENVO:03000013 biolink:NamedThing cirque glacier A small glacier contained within a cirque basin. NMDCO_relaxed.owl ENVO:00000087 biolink:NamedThing cliff A slope which is part of a rocky elevation and which has a high degree of steepness. NMDCO_relaxed.owl ENVO:00002000 biolink:NamedThing slope A solid astronomical body part which is part of the planetary surface between the peak of an elevation or the bottom of a depression and relatively flat surrounding land. NMDCO_relaxed.owl ENVO:00000141 biolink:NamedThing bank The sloping margin of a watercourse, serving to confine it to its natural channel. NMDCO_relaxed.owl ENVO:00000223 biolink:NamedThing continental shelf A slope which a) extends the perimeter of a continent, b) is covered by a shallow marine water body during interglacial periods, c) has a low degree of steepness relative to a continental slope or rise. NMDCO_relaxed.owl ENVO:00000273 biolink:NamedThing continental slope A slope which 1) is part of the seafloor and 2) extends from the end of the continental shelf (the shelf break) to the continental rise. NMDCO_relaxed.owl ENVO:00000274 biolink:NamedThing continental rise A slope which a) bridges, and thus lies between, a continental slope and an abyssal plain, b) is formed by the accumulation of sediments transported from a continental slope by processes including turbidity currents c) has a gradient less than a continental slope yet greater than a continental shelf. NMDCO_relaxed.owl ENVO:00000280 biolink:NamedThing escarpment A slope which separates different physiogeographic provinces that are typically composed of rocks of different age and compositoin. NMDCO_relaxed.owl ENVO:00000530 biolink:NamedThing apron A gentle slope, with a generally smooth surface, particularly found around groups of islands and seamounts. NMDCO_relaxed.owl ENVO:01000298 biolink:NamedThing continental margin A slope which is part of the seafloor, descends from the continental crust to the oceanic crust, and comprises the continental shelf, continental slope, and continental rise. NMDCO_relaxed.owl ENVO:01000319 biolink:NamedThing rocky slope A rocky slope is a slope which has a surface primarily composed of rock. NMDCO_relaxed.owl ENVO:01000332 biolink:NamedThing gravelly slope A gravelly slope is a slope which has a surface primarily composed of gravel. NMDCO_relaxed.owl ENVO:01000333 biolink:NamedThing hillside A hillside is a slope that is part of a hill. NMDCO_relaxed.owl ENVO:01000334 biolink:NamedThing talus slope A talus slope is a slope which has a surface layer composed of scree. NMDCO_relaxed.owl ENVO:01001489 biolink:NamedThing spur A slope of land descending laterally from a hill, mountain or main crest of a ridge. NMDCO_relaxed.owl ENVO:00000088 biolink:NamedThing sea cliff A cliff that is a margin of a sea or ocean. NMDCO_relaxed.owl ENVO:00000089 biolink:NamedThing inland cliff A cliff which is not adjacent to a major water body. NMDCO_relaxed.owl ENVO:00000090 biolink:NamedThing coastal plain An area of flat, low-lying land adjacent to a coast and separated from the interior by other features. NMDCO_relaxed.owl ENVO:00000244 biolink:NamedThing abyssal plain A flat or very gently sloping areas of the deep ocean basin floor. NMDCO_relaxed.owl ENVO:00000253 biolink:NamedThing scroll plane A plain where a stream meanders across an area with a very low gradient, usually with a fairly continuous discharge. In addition to meanders, scroll plains are also characterised by many oxbow lakes. NMDCO_relaxed.owl ENVO:00000254 biolink:NamedThing till plain An extensive flat plain of glacial till that forms when a sheet of ice becomes detached from the main body of a glacier and melts in place depositing the sediments it carried. NMDCO_relaxed.owl ENVO:00000255 biolink:NamedThing flood plain An area which is subject to periodic flooding. NMDCO_relaxed.owl ENVO:00000258 biolink:NamedThing alluvial plain A relatively flat and gently sloping landform found at the base of a range of hills or mountains, formed by the deposition of alluvial soil over a long period of time by one or more streams coming from the mountains. NMDCO_relaxed.owl ENVO:00000259 biolink:NamedThing lacustrine plain A plain that originally formed in a lacustrine environment, that is, as the bed of a lake, but from which the water has disappeared, by natural drainage, evaporation or other geophysical processes. NMDCO_relaxed.owl ENVO:00000312 biolink:NamedThing sandur The plain formed by the large amounts of silt and sediment, picked up as a glacier erodes the underlying rocks as it moves slowly downhill, and at the snout of the glacier, meltwater can carry this sediment away from the glacier and deposit it on a broad plain. The material in the outwash plain is often size-sorted by the water runoff of the melting glacier with the finest materials, like silt, being the most distantly re-deposited, whereas larger boulders are the closest to the original terminus of the glacier. NMDCO_relaxed.owl ENVO:00000434 biolink:NamedThing outwash fan A fan-shaped body of sediments deposited by braided streams from a melting glacier. NMDCO_relaxed.owl ENVO:00000460 biolink:NamedThing penplain A region of low topographic relief as a consequence of erosion by streams. NMDCO_relaxed.owl ENVO:00004683 biolink:NamedThing karst field A large flat plain in karst territory with areas usually 5 to 400 sqaure kilometres. NMDCO_relaxed.owl ENVO:00000092 biolink:NamedThing sea beach A beach which is part of a sea shore. NMDCO_relaxed.owl ENVO:00000093 biolink:NamedThing lacustrine beach A beach which is part of a lake shore. NMDCO_relaxed.owl ENVO:00000415 biolink:NamedThing raised beach A beach or wave cut platform raised above the shore line by a relative fall in the sea level. NMDCO_relaxed.owl ENVO:00000545 biolink:NamedThing shingle beach A beach which is armoured with pebbles or small to medium sized cobbles. NMDCO_relaxed.owl ENVO:00002199 biolink:NamedThing sandy beach A beach which is primarily composed of sand. NMDCO_relaxed.owl ENVO:00000096 biolink:NamedThing caldera A feature formed by the collapse of land following a volcanic eruption. NMDCO_relaxed.owl ENVO:00000514 biolink:NamedThing crater A generally circular saucer or bowl-shaped depression caused by explosive action. NMDCO_relaxed.owl ENVO:00000245 biolink:NamedThing maar A broad, low relief crater that results from a phreatic eruption or explosion caused by groundwater contact with hot lava or magma. The maar typically fills with water to form a relatively shallow crater lake. NMDCO_relaxed.owl ENVO:00000246 biolink:NamedThing volcanic crater A crater formed by a volcano, within which occurs a vent (or vents) from which magma erupts as gases, lava, and ejecta. NMDCO_relaxed.owl ENVO:00000461 biolink:NamedThing pseudocrater A volcanic landform which resembles a true volcanic crater, but differs in that it is not an actual vent from which lava has erupted. A pseudocrater is characterised by the absence of any magma conduit which connects below the surface of the earth. Pseudocraters are formed by steam explosions as flowing hot lava crosses over a wet surface, such as a swamp, a lake, or a pond. The explosive gases break through the lava surface in a manner similar to a phreatic eruption, and the tephra builds up crater-like forms which can appear very similar to real volcanic craters. NMDCO_relaxed.owl ENVO:01000160 biolink:NamedThing marine pockmark Pockmarks are craters in the seabed resulting from the release of gas or liquid. Generally, they are formed in soft, fine-grained seabed sediments by the escape of fluids (gas or water, but mainly methane) into the water column. NMDCO_relaxed.owl ENVO:01001071 biolink:NamedThing impact crater A crater which was formed as a result of the impact of one astronomical body on another. NMDCO_relaxed.owl ENVO:03000089 biolink:NamedThing permafrost crater derived from a methane explosion A crater which is found in permafrost and formed as a result of an explosion fuelled by methane formerly contained in that permafrost. NMDCO_relaxed.owl ENVO:00000097 biolink:NamedThing desert area A region rendered barren or partially barren by environmental extremes, especially by low rainfall. NMDCO_relaxed.owl ENVO:01000752 biolink:NamedThing area of barren land An area of a planet's surface which is primarily composed of bedrock, desert pavement, scarp rock, talus, material exposed by slides, volcanic material, glacial debris, sand, material exposed during strip mining, gravel, and other accumulations of earthen material in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:00000098 biolink:NamedThing island Area of dry or relatively dry land surrounded by water or low wetland. NMDCO_relaxed.owl ENVO:01000635 biolink:NamedThing planetary landmass A landmass which is part of a planet. NMDCO_relaxed.owl ENVO:03000085 biolink:NamedThing thermokarst An irregular land surface which consists of marshy hollows, hummocks, thermokarst depressions and thermokarst lakes formed from the erosion of ice-rich thawing permafrost areas. NMDCO_relaxed.owl ENVO:00000099 biolink:NamedThing artificial island An island constructed by human effort. NMDCO_relaxed.owl ENVO:00000103 biolink:NamedThing mangrove island An island formed of trees and shrubs that grow in saline coastal habitats in the tropics and subtropics. NMDCO_relaxed.owl ENVO:00000221 biolink:NamedThing continental island An island that lies on a continental shelf. NMDCO_relaxed.owl ENVO:00000222 biolink:NamedThing oceanic island An island that does not sit on a continental shelf, and is of volcanic origin. NMDCO_relaxed.owl ENVO:00000368 biolink:NamedThing ephemeral island An island, usually the consequence of the activity of a submarine volcano, that only exists for a short period or short periods of time after its formation, then being eroded or otherwise disappearing beneath the surface of a body of water. NMDCO_relaxed.owl ENVO:00000423 biolink:NamedThing river island An island that lies in a river. NMDCO_relaxed.owl ENVO:00000424 biolink:NamedThing lake island An island that lies in a lake. NMDCO_relaxed.owl ENVO:03501240 biolink:NamedThing skerry An island which is small, principally composed of rock, and usually too small for human habitation. NMDCO_relaxed.owl ENVO:03501242 biolink:NamedThing desert island An island that is not permanently populated by humans. NMDCO_relaxed.owl ENVO:03600034 biolink:NamedThing cay An island which is small, low in elevation, sandy, and located on the surface of a coral reef. NMDCO_relaxed.owl ENVO:1000750 biolink:NamedThing depositional island An island formed by deposition of solid material such as sand or small rocks where a water current loses some of its carrying capacity. NMDCO_relaxed.owl ENVO:03000015 biolink:NamedThing geographic basin A depression which is part of a planetary crust, is of geographic scale, and is partially or completely enclosed. NMDCO_relaxed.owl ENVO:03000084 biolink:NamedThing thermokarst depression A geographic basin which is formed due to the erosion of thermokarst by meltwater released from thawing permafrost. NMDCO_relaxed.owl ENVO:00000101 biolink:NamedThing delta A tract of alluvium formed at the mouth of a river where the deposition ofsome of its load exceeds its rate of removal, crossed by the divergent channels (distributaries) of the river. NMDCO_relaxed.owl ENVO:00000386 biolink:NamedThing river mouth The end of a stream where it enters a standing water body such as a lake, sea or ocean. NMDCO_relaxed.owl ENVO:00000102 biolink:NamedThing cave entrance A two-dimensional continuant fiat boundary which is used to demarcate the interior from the exterior of a cave. NMDCO_relaxed.owl ENVO:00000486 biolink:NamedThing shoreline A two-dimensional continuant fiat boundary which is located between a landmass and a water body. NMDCO_relaxed.owl ENVO:01001544 biolink:NamedThing two-dimensional fiat ice surface An two-dimensional continuant fiat boundary which overlaps the surface layer of a mass of ice. NMDCO_relaxed.owl ENVO:00000105 biolink:NamedThing lake surface NMDCO_relaxed.owl ENVO:01001309 biolink:NamedThing liquid air-water interface layer A liquid surface layer which is in contact with air. NMDCO_relaxed.owl ENVO:01001302 biolink:NamedThing estuarine coastal surface layer A layer of estuarine water which extends a few centimeters from the surface of the water column towards the estuary bed and from the shore to a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters. NMDCO_relaxed.owl ENVO:01001312 biolink:NamedThing estuarine coastal upper water column A layer of estuarine water which extends from the surface of the water column to the pycnocline or mid-depth and from the shore to a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters. NMDCO_relaxed.owl ENVO:01001315 biolink:NamedThing estuarine open water surface layer A layer of estuarine water which extends a few centimeters from the surface of the water column towards the estuary bed and from a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters until the end of the estuary most distal from the coast. NMDCO_relaxed.owl ENVO:01001316 biolink:NamedThing estuarine open water upper water column A layer of estuarine water which extends from the surface of the water column to the pycnocline or mid-depth and from a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters until the end of the estuary most distal from the coast. NMDCO_relaxed.owl ENVO:01001477 biolink:NamedThing liquid astronomical body part A part of an astronomical body which is primarily composed of liquid material. NMDCO_relaxed.owl ENVO:00000427 biolink:NamedThing meander A bend in a stream. A stream flowing through a wide valley or flat plain will tend to form a meanders as it alternatively erodes and deposits sediments along its course. NMDCO_relaxed.owl ENVO:00002063 biolink:NamedThing oil seep The result of the release of natural hydrocarbons to the surface of the earth, including beneath the sea, by natural geological processes. NMDCO_relaxed.owl ENVO:01000644 biolink:NamedThing liquid planetary core A liquid planetary core is a planetary core which is primarily composed of liquid material. NMDCO_relaxed.owl ENVO:01000819 biolink:NamedThing hydrosphere An astronomical body part which is composed of the combined mass of water found on, under, and over the surface of a planet. NMDCO_relaxed.owl ENVO:01001277 biolink:NamedThing asphalt road A road which is primarily composed of asphalt. NMDCO_relaxed.owl ENVO:01001476 biolink:NamedThing body of liquid A liquid astronomical body part which is continuous and is delimited by physical discontinuities or non-liquid boundaries. NMDCO_relaxed.owl ENVO:06105011 biolink:NamedThing water column A liquid astronomical body part which 1) vertically spans a water body and 2) has fiat boundaries approximating a columnar shape. NMDCO_relaxed.owl ENVO:00000501 biolink:NamedThing submerged bed The portion of the ground surface which lies below water. NMDCO_relaxed.owl ENVO:00002144 biolink:NamedThing cave wall A solid surface layer which 1) forms part of the boundary between the cavity of a cave and its solid container and 2) is roughtly perpendicular to the cave floor. NMDCO_relaxed.owl ENVO:01000019 biolink:NamedThing cave floor A solid surface layer which 1) forms part of the boundary between the cavity of a cave and its solid container and 2) is the closest solid boundary to the gravitational centre of the astronomical body of which the cave is a part. NMDCO_relaxed.owl ENVO:01000296 biolink:NamedThing dry lake bed A lake bed which is dry. That is, the bed of a dry lake. NMDCO_relaxed.owl ENVO:01000324 biolink:NamedThing planetary surface A planetary surface is a surface layer where the solid or liquid material of a planet comes into contact with an atmosphere or outer space. NMDCO_relaxed.owl ENVO:01000486 biolink:NamedThing building floor A building floor is a surface layer which is part of a building and used for walking. NMDCO_relaxed.owl ENVO:01000812 biolink:NamedThing desert pavement A desert surface covered with closely packed, interlocking angular or rounded rock fragments of pebble and cobble size. NMDCO_relaxed.owl ENVO:01000910 biolink:NamedThing soil biocrust A biocrust which is formed by photosynthetic microbial assemblages colonising the surface layer of a portion of arid soil. Through their successional dynamics, these communities reduce the soil surface's albedo, impart it with stability against erosion, modify its hydrology, and promote its fertility. NMDCO_relaxed.owl ENVO:01001543 biolink:NamedThing water ice surface layer An ice surface layer which is primarily composed of water ice. NMDCO_relaxed.owl ENVO:01001783 biolink:NamedThing liquid surface of an astronomical body A surface of an astronomical body which is part of a water body present on that body. NMDCO_relaxed.owl ENVO:01001785 biolink:NamedThing land A surface layer of an astronomical body which is primarily composed of solid material and is not covered by oceans or other bodies of water. NMDCO_relaxed.owl ENVO:04000010 biolink:NamedThing soil surface layer A surface layer which is composed primarily of soil. NMDCO_relaxed.owl ENVO:06105201 biolink:NamedThing water table A surface layer which is 1) part of a phreatic zone in contact with a vadose zone and 2) contains interstitial water with a pressure head equal to atmospheric pressure. NMDCO_relaxed.owl ENVO:00000108 biolink:NamedThing meadow ecosystem A grassland ecosystem which contains a variety of annual, biennial and perennial plants growing on rolling or flat terrain. NMDCO_relaxed.owl ENVO:01001206 biolink:NamedThing grassland ecosystem An ecosystem in which grasses (Graminae) are the dominant form of vegetation and determine the system's structure and dynamics. NMDCO_relaxed.owl ENVO:01000177 biolink:NamedThing grassland biome A grassland ecosystem in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000448 biolink:NamedThing mixed grassland A grassland which contains a mixture of tall and short grasses. NMDCO_relaxed.owl ENVO:01001806 biolink:NamedThing tropical grassland A grassland ecosystem which is subject to tropical climatic conditions. NMDCO_relaxed.owl ENVO:01001807 biolink:NamedThing flooded grassland NMDCO_relaxed.owl ENVO:01001808 biolink:NamedThing montane grassland NMDCO_relaxed.owl ENVO:01001809 biolink:NamedThing subtropical grassland A grassland which is subject to subtropical climatic conditions. NMDCO_relaxed.owl ENVO:01001811 biolink:NamedThing temperate grassland NMDCO_relaxed.owl ENVO:01001812 biolink:NamedThing subpolar grassland NMDCO_relaxed.owl ENVO:00000110 biolink:NamedThing lava tunnel A tunnel formed by the flow of molten lava, which has subsequently drained out. NMDCO_relaxed.owl ENVO:00000322 biolink:NamedThing volcanic cave A cave formed in volcanic rock. NMDCO_relaxed.owl ENVO:01000362 biolink:NamedThing inflationary cave A cave that is formed by the action of pressurised lava pushing against surrounding rock and then draining away. NMDCO_relaxed.owl ENVO:00000111 biolink:NamedThing forested area An area with a high density of trees. A small forest may be called a wood. NMDCO_relaxed.owl ENVO:00000114 biolink:NamedThing agricultural field A field which is located on land and used for agricultural purposes, such as the grazing of livestock or the cultivation of crops. NMDCO_relaxed.owl ENVO:00000146 biolink:NamedThing snow field A region of permanent snow in mountainous areas or high latitudes. NMDCO_relaxed.owl ENVO:00000257 biolink:NamedThing flood fringe Area of a flood plane covered by the flood, but which does not experience a strong current. NMDCO_relaxed.owl ENVO:00000299 biolink:NamedThing ice field A field of ice, formed in regions of perennial frost. NMDCO_relaxed.owl ENVO:00000444 biolink:NamedThing woodland clearing A tract of land which has few or no trees and is surrounded by more heavily wooded areas. NMDCO_relaxed.owl ENVO:00000548 biolink:NamedThing gravel field A field which is composed primarily of gravel. NMDCO_relaxed.owl ENVO:01000353 biolink:NamedThing marine mesoscale eddy field A mesoscale eddy field is an expanse of marine water which includes coherent vortices, as well as a rich cascade of other structures such as filaments, squirts and spirals and is characterized by temperature and salinity anomalies with associated flow anomalies that are nearly in geostrophic balance. Although only the surface expression of mesoscale eddies is visible in satellite images of sea surface height or temperature, they are in fact three dimensional structures that reach down into the pycnocline. NMDCO_relaxed.owl ENVO:01000437 biolink:NamedThing lava field A lava field is an expanse of flat-lying lava flows. Such features are generally composed of highly fluid basalt lava, and can extend for tens or even hundreds of miles across the underlying terrain. NMDCO_relaxed.owl ENVO:01001851 biolink:NamedThing geothermally active field A field in which geothermal processes occur. NMDCO_relaxed.owl ENVO:02000003 biolink:NamedThing pockmark field A pockmark field is an undersea feature formed by shallow seabed depressions, typically several tens of metres across and a few metres deep. Generally, they are formed in soft, fine-grained seabed sediments by the escape of fluids (gas or water, but mainly methane) into the water column. NMDCO_relaxed.owl ENVO:00000115 biolink:NamedThing orchard An intentional planting of trees or shrubs maintained for food, typically fruit, production. NMDCO_relaxed.owl ENVO:00000116 biolink:NamedThing vineyard A place where grapes are grown for making wine, raisins or table grapes. NMDCO_relaxed.owl ENVO:00000118 biolink:NamedThing coconut plantation NMDCO_relaxed.owl ENVO:00000120 biolink:NamedThing oil palm plantation NMDCO_relaxed.owl ENVO:00000159 biolink:NamedThing sugar plantation NMDCO_relaxed.owl ENVO:00000160 biolink:NamedThing sisal plantation NMDCO_relaxed.owl ENVO:00000161 biolink:NamedThing banana plantation NMDCO_relaxed.owl ENVO:00000162 biolink:NamedThing tea plantation NMDCO_relaxed.owl ENVO:00000163 biolink:NamedThing coffee plantation NMDCO_relaxed.owl ENVO:00000164 biolink:NamedThing rubber plantation A plantation which is used to grow Hevea brasiliensis or other species from which natural latex is harvested. NMDCO_relaxed.owl ENVO:00000193 biolink:NamedThing olive grove NMDCO_relaxed.owl ENVO:00000288 biolink:NamedThing cotton plantation NMDCO_relaxed.owl ENVO:00000296 biolink:NamedThing rice field A paddy field for the cultivation of rice. NMDCO_relaxed.owl ENVO:03501120 biolink:NamedThing dairy farm A farm which produces milk or products derived from milk. NMDCO_relaxed.owl ENVO:03600044 biolink:NamedThing organic farm A farm which is managed using practices certified to be organic by a competent authority. NMDCO_relaxed.owl ENVO:00000119 biolink:NamedThing planted forest A forest that has been intentionally established by human intervention. NMDCO_relaxed.owl ENVO:01001243 biolink:NamedThing forest ecosystem An ecosystem which is determined by communities of plants with a tree growth form and in which members of those communities form continuous or discontinuous regions of canopy cover. NMDCO_relaxed.owl ENVO:01000174 biolink:NamedThing forest biome A forest ecosystem which is undergoing climactic ecological succession. NMDCO_relaxed.owl ENVO:01000430 biolink:NamedThing broadleaf forest A forest biome which contains densely packed populations or communities of broadleaf trees, strongly limiting light penetration to the forest floor. NMDCO_relaxed.owl ENVO:01000431 biolink:NamedThing mixed forest A forest ecosystem which contains densely packed populations or communities of broadleaf and coniferous trees, strongly limiting light penetration to the forest floor. NMDCO_relaxed.owl ENVO:01000432 biolink:NamedThing swamp forest NMDCO_relaxed.owl ENVO:01000433 biolink:NamedThing needleleaf forest NMDCO_relaxed.owl ENVO:01000434 biolink:NamedThing sclerophyllous forest NMDCO_relaxed.owl ENVO:01000435 biolink:NamedThing montane forest NMDCO_relaxed.owl ENVO:01000768 biolink:NamedThing primary forest Forest which originally covered a region before changes in the environment brought about by people. (Source: PHC) NMDCO_relaxed.owl ENVO:01001803 biolink:NamedThing tropical forest A forest ecosystem which is subject to tropical climate conditions. NMDCO_relaxed.owl ENVO:01001804 biolink:NamedThing subtropical forest A forest ecosystem which is subject to subtropical climate conditions. NMDCO_relaxed.owl ENVO:01001805 biolink:NamedThing temperate forest A forest ecosystem which is subject to temperate climate conditions. NMDCO_relaxed.owl ENVO:03600038 biolink:NamedThing experimental forest ecosystem A forest ecosystem which is designated for research. NMDCO_relaxed.owl ENVO:00000395 biolink:NamedThing channel of a watercourse A depressed landform which physically confines a river, slough or ocean strait, and which consists of a bed and banks. NMDCO_relaxed.owl ENVO:00000278 biolink:NamedThing dry stream A stream channel through which no water flows and which has dried, containing no appreciable accumulations of water. NMDCO_relaxed.owl ENVO:00000394 biolink:NamedThing strait A narrow channel of water that connects two larger bodies of water, and thus lies between two land masses. NMDCO_relaxed.owl ENVO:00000396 biolink:NamedThing marine channel A channel of a watercourse which contains marine water. NMDCO_relaxed.owl ENVO:00000397 biolink:NamedThing lake channel A channel of a watercourse which contains lake water. NMDCO_relaxed.owl ENVO:00000523 biolink:NamedThing cutoff A channel formed as a result of a stream cutting through a meander neck. NMDCO_relaxed.owl ENVO:01000650 biolink:NamedThing stream channel A channel of a watercourse which contains a stream. NMDCO_relaxed.owl ENVO:00000122 biolink:NamedThing track A small road, generally not paved. NMDCO_relaxed.owl ENVO:01000771 biolink:NamedThing all season road A road which is usable across all seasons. NMDCO_relaxed.owl ENVO:01000780 biolink:NamedThing public road A road which is publically accessible. NMDCO_relaxed.owl ENVO:01001278 biolink:NamedThing concrete road A road which is primarily composed of concrete. NMDCO_relaxed.owl ENVO:01001280 biolink:NamedThing driveway A road which is used for local access to one or more structures, and is privately owned and maintained by an individual or group. NMDCO_relaxed.owl ENVO:00000564 biolink:NamedThing archeological site A place (or group of physical sites) in which evidence of past activity is preserved (either prehistoric or historic or contemporary), and which is, has been, or may be, investigated using the discipline of archaeology. NMDCO_relaxed.owl ENVO:01001173 biolink:NamedThing sacred site A fiat object part which contains entities of high spiritual or cultural significance to one or more human groups. NMDCO_relaxed.owl ENVO:00000126 biolink:NamedThing sulfur spring A spring through which water with elevated levels of dissolved derivatives of sulfur flows. NMDCO_relaxed.owl ENVO:01001888 biolink:NamedThing calcic spring A mineral spring through which water with elevated concentrations of calcium hydroxide flows. NMDCO_relaxed.owl ENVO:01001889 biolink:NamedThing lithia spring A mineral spring through which water with elevated concentrations of lithium salts flows. NMDCO_relaxed.owl ENVO:01001890 biolink:NamedThing chalybeate spring A spring through which water with elevated concentrations of iron salts flows. NMDCO_relaxed.owl ENVO:01001891 biolink:NamedThing alum spring A spring through which water with elevated concentrations of hydrated double sulfate aluminium salts flows. NMDCO_relaxed.owl ENVO:01001893 biolink:NamedThing salt spring A mineral spring through which water with elevated concentrations of sodium, calcium, or magnesium salts flows. NMDCO_relaxed.owl ENVO:01001894 biolink:NamedThing alkaline spring A mineral spring through which water with a high pH flows. NMDCO_relaxed.owl ENVO:01001895 biolink:NamedThing soda spring A mineral spring through which water with elevated levels of dissolved carbon dioxide gas flows. NMDCO_relaxed.owl ENVO:01001896 biolink:NamedThing radioactive spring A mineral spring through which water with elevated levels of radioactive material flows. NMDCO_relaxed.owl ENVO:00000130 biolink:NamedThing rocky reef A ridge of rocks, lying near the surface of the sea, which may be visible at low tide, but is usually covered by water. NMDCO_relaxed.owl ENVO:00000149 biolink:NamedThing artificial reef Chains of rocks or coral at or near the surface of water constructed by man. NMDCO_relaxed.owl ENVO:01000143 biolink:NamedThing marine reef A reef which is located in a marine water body. NMDCO_relaxed.owl ENVO:01001691 biolink:NamedThing mass of compounded environmental materials An mass of environmental materials which has appreciable quantities of several individual materials, such that the removal of one would convert the mass into a different entity. NMDCO_relaxed.owl ENVO:01000549 biolink:NamedThing mass of biological material NMDCO_relaxed.owl ENVO:01001620 biolink:NamedThing mass of ice and snow A object which is composed primarily of water-based snow and ice. NMDCO_relaxed.owl ENVO:03000111 biolink:NamedThing snow mass A mass of snow. NMDCO_relaxed.owl ENVO:00000134 biolink:NamedThing permafrost An environmental material which is 1) composed primarily of soil or rock and included ice or organic material and 2) at or below the freezing point of water for two or more years. NMDCO_relaxed.owl ENVO:00002191 biolink:NamedThing animal litter Straw or other material strewn in an animal's enclosure (e.g. a stable) for it to sleep on and to absorb its faeces and urine. NMDCO_relaxed.owl ENVO:00002264 biolink:NamedThing waste material A material which is not the desired output of a process and which is typically the input of a process which removes it from its producer (e.g. a disposal process). NMDCO_relaxed.owl ENVO:00003930 biolink:NamedThing scum A layer of impurities that accumulates at the surface of a liquid (especially water or molten metal). NMDCO_relaxed.owl ENVO:00005738 biolink:NamedThing foamy environmental material An environmental material which has the quality of a foam. NMDCO_relaxed.owl ENVO:00010505 biolink:NamedThing aerosol Airborne solid particles (also called dust or particulate matter (PM)) or liquid droplets. NMDCO_relaxed.owl ENVO:00010506 biolink:NamedThing emulsion A mixture of two immiscible (unblendable) substances. One substance (the dispersed phase) is dispersed in the other (the continuous phase). NMDCO_relaxed.owl ENVO:01000001 biolink:NamedThing mud An environmental material which is a liquid or semi-liquid mixture of water and some combination of soil, silt, and clay particles. NMDCO_relaxed.owl ENVO:01000060 biolink:NamedThing particulate environmental material An environmental material which is composed primarily of particles. NMDCO_relaxed.owl ENVO:01000155 biolink:NamedThing organic material Environmental material derived from living organisms and composed primarily of one or more biomacromolecules. NMDCO_relaxed.owl ENVO:01000256 biolink:NamedThing mineral material A mineral material is an environmental material which is primarily composed of some substance that is naturally occurring, solid and stable at room temperature, representable by a chemical formula, usually abiogenic, and that has an ordered atomic structure. NMDCO_relaxed.owl ENVO:01000406 biolink:NamedThing snow Snow is an environmental material which is primarily composed of flakes of crystalline water ice. NMDCO_relaxed.owl ENVO:01000575 biolink:NamedThing wax A wax is an environmental material which is primarily composed of lipids or other organic compounds that consist of long alkyl chains. Waxes are are malleable near ambient temperatures and melt at approximately 45 degrees Celsius. NMDCO_relaxed.owl ENVO:01000637 biolink:NamedThing outer space Outer space is a hard vacuum containing a low density of particles, predominantly a plasma of hydrogen and helium as well as electromagnetic radiation, magnetic fields, neutrinos, dust and cosmic rays that exists between celestial bodies. NMDCO_relaxed.owl ENVO:01000797 biolink:NamedThing gaseous environmental material A material entity which is composed of one or more chemical entities and has neither independent shape nor volume but tends to expand indefinitely. NMDCO_relaxed.owl ENVO:01000814 biolink:NamedThing solid environmental material An environmental material which is in a solid state. NMDCO_relaxed.owl ENVO:01000815 biolink:NamedThing liquid environmental material An environmental material which is in a liquid state. NMDCO_relaxed.owl ENVO:01000939 biolink:NamedThing time crystal An open system in non-equilibrium with its environment that exhibits time translation symmetry breaking. NMDCO_relaxed.owl ENVO:01001069 biolink:NamedThing metallic material A material which is composed primarily of one or more pure metals and which shows their properties. NMDCO_relaxed.owl ENVO:01001154 biolink:NamedThing volatile astrogeological material A material which is composed primarily of chemical elements and compounds with relatively low boiling points, equilibrium condensation temperatures below 1300 Kelvin, and which are part of the crust or atmosphere of a moon or planet. NMDCO_relaxed.owl ENVO:01001156 biolink:NamedThing refractory astrogeological material A material which is composed primarily of chemical elements and compounds which have equilibrium condensation temperatures above approximately 1300 Kelvin and which are part of the crust or atmosphere of a moon or planet. NMDCO_relaxed.owl ENVO:01001202 biolink:NamedThing alluvium Soil or sediment which has been eroded and influenced by flowing water and redeposited in a non-marine setting. NMDCO_relaxed.owl ENVO:01001560 biolink:NamedThing colloidal suspension An environmental material which is primarily composed of a dispersed phase of insoluable particles, approximately between 1 nanometer and 1 micrometer in maximum dimension, distributed throughout a material acting as a medium of suspension. NMDCO_relaxed.owl ENVO:01001644 biolink:NamedThing material primarily composed of biogenic carbonates NMDCO_relaxed.owl ENVO:01001649 biolink:NamedThing heavy fraction material An environmental material which is denser than bromoform. NMDCO_relaxed.owl ENVO:01001650 biolink:NamedThing light fraction material An environmental material which is less dense than bromoform. NMDCO_relaxed.owl ENVO:02000004 biolink:NamedThing nesting material Nesting material is an animal habitation consisting of matierals used to cushion, insulate and protect the young of the organism. The adult will use the material to form a protective structure to house and raise their young. Nests are built primarily by birds, but also by mammals, fish, insects and reptiles. NMDCO_relaxed.owl ENVO:02000140 biolink:NamedThing fluid environmental material An environmental material which is unable to resist shear forces and continuously deforms when subject to them. NMDCO_relaxed.owl ENVO:03000076 biolink:NamedThing slush ice A slurry of frazil, snow, and liquid water. NMDCO_relaxed.owl ENVO:03501259 biolink:NamedThing litter Environmental material consisting of waste products that have been discarded at an unsuitable location. NMDCO_relaxed.owl ENVO:03501300 biolink:NamedThing manure An environmental material consisting of organic matter from plants and/or animals that is used in agriculture as fertilizer. NMDCO_relaxed.owl ENVO:03501303 biolink:NamedThing natural-based polymer Macromolecules that are obtained naturally from plants or animals. NMDCO_relaxed.owl ENVO:03501306 biolink:NamedThing mylar A polyester film made from stretched polyethylene terephthalate (PET). NMDCO_relaxed.owl ENVO:03510015 biolink:NamedThing xanthan gum A polysaccharide that functions as an emulsifier, stabilizer, and thickener in mixtures. NMDCO_relaxed.owl ENVO:03510016 biolink:NamedThing tragacanth A naturally occurring plant-based gum, which functions as a viscous, odorless, tasteless, water-soluble mixture of polysaccharides that absorbs water to become a gel/paste. NMDCO_relaxed.owl ENVO:03510018 biolink:NamedThing resin A solid or highly viscous plant or synthetic based substance that is typically convertible into polymers. NMDCO_relaxed.owl ENVO:03510023 biolink:NamedThing shellac A resin secreted by the female lac bug, which is dissolved in alcohol to be used as a brush-on colorant, food glaze, and wood finish. NMDCO_relaxed.owl ENVO:03510037 biolink:NamedThing radioactive material Any material containing unstable atoms that emit ionizing radiation as it decays. NMDCO_relaxed.owl ENVO:03510038 biolink:NamedThing volume of cyanoacrylate An environmental material which is primarily composed of cyanoacrolate. NMDCO_relaxed.owl ENVO:03510064 biolink:NamedThing emissions from petroleum combustion An environmental material which is composed primarily of gases and particles produced by the combustion of petroleum fuels. NMDCO_relaxed.owl ENVO:03600013 biolink:NamedThing bituminous sand An environmental material which consists of either loose sands or partially consolidated sandstone, containing a naturally occurring mixture of sand, clay, and water, soaked with a dense and extremely viscous form of petroleum. NMDCO_relaxed.owl ENVO:03600017 biolink:NamedThing slurry An environmental material which is composed of insoluble solid particles suspended in a liquid. NMDCO_relaxed.owl ENVO:06105003 biolink:NamedThing thermoplastic material An environmental material which is capable of, repeatedly, becoming plastic when heated and hardening again when cooled. NMDCO_relaxed.owl ENVO:06105101 biolink:NamedThing plastic An environnmental material which 1) is composed primarily of polymers with high molecular mass and 2) once deformed does not spontaneously return to its original shape. NMDCO_relaxed.owl ENVO:2000045 biolink:NamedThing hydrocarbon-based environmental material NMDCO_relaxed.owl FOODON:00002403 biolink:NamedThing food material Any substance that can be consumed by an organism to satisfy nutritional or other health needs, or to provide a social or organoleptic food experience NMDCO_relaxed.owl ENVO:00000136 biolink:NamedThing demilitarized zone A geographical area, usually the frontier or boundary between two or more military powers (or alliances), where military activity is not permitted, usually by peace treaty, armistice or other bilateral or multilateral agreement. NMDCO_relaxed.owl ENVO:00000476 biolink:NamedThing lake inlet An opening of a lake into its shore. NMDCO_relaxed.owl ENVO:00000139 biolink:NamedThing irrigation ditch A ditch that supplies water to surrounding land. NMDCO_relaxed.owl ENVO:00000140 biolink:NamedThing drainage ditch A ditch that collects water from the surrounding land. NMDCO_relaxed.owl ENVO:00000142 biolink:NamedThing stream bank The sloping margin of a stream, serving to confine it to its natural channel. NMDCO_relaxed.owl ENVO:00000143 biolink:NamedThing river bank The sloping margin of a river, serving to confine it to its natural channel. NMDCO_relaxed.owl ENVO:00000145 biolink:NamedThing ice cap A dome-shaped ice mass that covers less than 50,000 km2 of land area (usually covering a highland area). NMDCO_relaxed.owl ENVO:01001547 biolink:NamedThing land ice mass An ice mass which has formed over land. NMDCO_relaxed.owl ENVO:00000307 biolink:NamedThing icefall A portion of a glacier characterized by rapid flow, a chaotic crevassed surface, and a pronounced, at times vertical, slope. NMDCO_relaxed.owl ENVO:00000380 biolink:NamedThing ice shelf An ice mass which 1) is attached to the coast 2) at least 2 meters in thickness 3) forms where a glacier or ice mass flows down to a coastline and onto the ocean surface and 4) grows by annual snow accumulation or by the seaward extension of land glaciers. NMDCO_relaxed.owl ENVO:00000392 biolink:NamedThing ice tongue A long and narrow sheet of ice projecting out from the coastline. An ice tongue forms when a valley glacier moves very rapidly out into the ocean or a lake. NMDCO_relaxed.owl ENVO:01000279 biolink:NamedThing ice lens An ice mass which is formed when moisture, diffused within soil or rock, accumulates and freezes in a localized zone, wedging soil or rock apart. NMDCO_relaxed.owl ENVO:01001529 biolink:NamedThing glacier snout An ice mass which constitutes that part of a glacier which has the lowest elevation. NMDCO_relaxed.owl ENVO:01001546 biolink:NamedThing iceberg An ice mass which has broken away from a larger ice mass on land, such as a glacier or ice shelf, and may be either afloat or aground. NMDCO_relaxed.owl ENVO:00000147 biolink:NamedThing ocean current The region occupied by any more or less continuous, directed movement of ocean water that flows in one of the Earth's oceans. Ocean Currents are rivers of hot or cold water within the ocean. The currents are generated from the forces acting upon the water like the earth's rotation, the wind, the temperature and salinity differences and the gravitation of the moon. The depth contours, the shoreline and other movements influence the direction and strength of the movements of water that forms a given current. NMDCO_relaxed.owl ENVO:01000067 biolink:NamedThing marine current A water current which is maintained by a continuous, directed movement of marine water, generated by forces caused by breaking waves, wind, Coriolis force, temperature and salinity differences, and tides caused by the gravitational pull of astronomical bodies. Depth contours, shoreline configurations and interaction with other currents influence a current's direction and strength. NMDCO_relaxed.owl ENVO:00000409 biolink:NamedThing whirlpool A large, swirling body of water produced by ocean tides. NMDCO_relaxed.owl ENVO:01000062 biolink:NamedThing marine benthic storm Benthic storms are strong benthic (near bottom) currents transporting sediment, created by the input of energy (largely kinetic) to the seabed. In regions with high mesoscale eddy activity, benthic storms are frequent and can create isohaline and isothermal conditions extending as much as 1000m above the seafloor. NMDCO_relaxed.owl ENVO:01000064 biolink:NamedThing marine downwelling A marine downwelling describes a net current of marine surface water towards deeper regions of the water column. Marine downwellings are usually caused by differences in the density (and hence, temperature and salinity) of seawater. NMDCO_relaxed.owl ENVO:01000068 biolink:NamedThing marine streamer Marine streamers are tongues of cold water that extend > 100 km offshore from upwelling regions. Enhanced primary productivity may occur in these waters as they are typically more nutrient rich than marine surface waters. NMDCO_relaxed.owl ENVO:01000069 biolink:NamedThing mesoscale marine eddy Mesoscale marine eddies are characterized by currents which flow in a roughly circular motion around the center of the eddy. The sense of rotation of these currents may either be cyclonic or anticyclonic. Ocean eddies are also usually made of water masses that are different to those outside of the eddy. Marine mesoscale eddies are between about 10 and 500 km in diameter, and persist for periods of days to months. They may be formed when an ocean current develops an instability. This instability grows, causing the current to meander, and eventually an eddy is pinched off from the meander. NMDCO_relaxed.owl ENVO:01000074 biolink:NamedThing oceanic gyre A gyre in oceanography is any large system of rotating ocean currents, particularly those involved with large wind movements. Gyres are caused by the Coriolis Effect; planetary vorticity along with horizontal and vertical friction, which determine the circulation patterns from the wind curl (torque). NMDCO_relaxed.owl ENVO:01000098 biolink:NamedThing deep ocean current A marine current that generally occurs below the permanent thermocline (where it occurs) or below 400 m depth and that is driven by density and temperature gradients. NMDCO_relaxed.owl ENVO:01000099 biolink:NamedThing marine surface current A marine current bordered by the surface of the water column and the permanent thermocline, where it occurs. Surface currents are mostly wind driven and mostly limited to the top 400 m of the water column. Ocean currents are driven by the circulation of wind above surface waters. Frictional stress at the interface between the ocean and the wind causes the water to move in the direction of the wind. Large ocean currents are a response of the atmosphere and ocean to the flow of energy from the tropics to polar regions. In some cases, currents are transient features and affect only a small area. Other ocean currents are essentially permanent and extend over large horizontal distances. NMDCO_relaxed.owl ENVO:01001336 biolink:NamedThing marine tidal flow A marine current which is maintained by a tidal flow process. NMDCO_relaxed.owl ENVO:00000148 biolink:NamedThing riffle A shallow stretch of a river or stream, where the current is above the average stream velocity and where the water forms small rippled waves as a result. It often consists of a rocky bed of gravels or other small stones. NMDCO_relaxed.owl ENVO:00000153 biolink:NamedThing headwater The upper part of a river system, denoting the upper basin and source streams of a river. NMDCO_relaxed.owl ENVO:00000220 biolink:NamedThing archipelago A group of geographically or geologically associated islands. NMDCO_relaxed.owl ENVO:00000329 biolink:NamedThing phreatic zone A compound astronomical body part which is located beneath the land surface and in which all interstices are filled with water that has a hydraulic head greater than atmospheric pressure due to the weight of overlying groundwater. NMDCO_relaxed.owl ENVO:01000687 biolink:NamedThing coast A coast is the area where land meets the sea, ocean, or lake. NMDCO_relaxed.owl ENVO:01001104 biolink:NamedThing rift zone A compound astronomical body part in which extensional tectonic processes occur and where the lithosphere is being pulled apart. NMDCO_relaxed.owl ENVO:01001478 biolink:NamedThing gaseous astronomical body part A part of an astronomical body which is primarily composed of gaseous material. NMDCO_relaxed.owl ENVO:03520003 biolink:NamedThing cloud part A part of a cloud. NMDCO_relaxed.owl ENVO:00000150 biolink:NamedThing coral reef A marine reef which is composed primarily of aragonite structures produced by living organisms, found in shallow, low-nutrient waters. NMDCO_relaxed.owl ENVO:01000144 biolink:NamedThing marine coral reef flat zone NMDCO_relaxed.owl ENVO:01000145 biolink:NamedThing marine coral reef back reef NMDCO_relaxed.owl ENVO:01000146 biolink:NamedThing marine coral reef crest NMDCO_relaxed.owl ENVO:01000147 biolink:NamedThing marine coral reef fore reef NMDCO_relaxed.owl ENVO:01000148 biolink:NamedThing marine coral reef buttress zone NMDCO_relaxed.owl ENVO:01000149 biolink:NamedThing marine coral reef deep fore reef NMDCO_relaxed.owl ENVO:01000150 biolink:NamedThing marine subtidal rocky reef A rocky reef which is located in the subtidal zone of a marine water body. NMDCO_relaxed.owl ENVO:01000161 biolink:NamedThing marine sponge reef A marine sponge reef is marine reefs primarily built by marine sponges. The primary frame-building sponges are all members of the order Hexactinosa. They are found only in glacier-scoured troughs of low-angle continental shelf. The seafloor is stable and consists of rock, coarse gravel, and large boulders. NMDCO_relaxed.owl ENVO:01001386 biolink:NamedThing mussel reef A marine reef which is primarily composed of self-adhered or conglomerated mussel shells. NMDCO_relaxed.owl ENVO:00000151 biolink:NamedThing sabkha An alkaline flat, in the context of a marine environment. NMDCO_relaxed.owl ENVO:00000196 biolink:NamedThing alkaline flat A dry lakebed consisting of fine-grained sediments infused with alkali salts. Generally the shore or bed of an endorheic lake. NMDCO_relaxed.owl ENVO:00000271 biolink:NamedThing chott A dry (salt) lake in the Saharan area of Africa that stays dry in the summer, but receive some water in the winter. This water may come as a groundwater discharge. NMDCO_relaxed.owl ENVO:00000154 biolink:NamedThing flood meadow ecosystem An area of grassland or pasture beside a river, subject to seasonal flooding. NMDCO_relaxed.owl ENVO:01000449 biolink:NamedThing wet meadow ecosystem A wet meadow is a type of wetland with soils that are saturated with water for part or all of the growing season. NMDCO_relaxed.owl ENVO:00000155 biolink:NamedThing cirque A depression which is semicircular or crescent-shaped, found towards the crest of a mountain, and formed by the erosional processes caused by the motion of a glacier. NMDCO_relaxed.owl ENVO:00000184 biolink:NamedThing hanging valley A tributary valley with the floor at a higher relief than the main channel into which it flows. They are most commonly associated with U-shaped valleys when a tributary glacier flows into a glacier of larger volume. NMDCO_relaxed.owl ENVO:00000436 biolink:NamedThing tunnel valley A deep but narrow valley with a 'U' shaped cross-section and frequently a 'U' shaped plan which is usually found filled with glacial till. It is formed when the edge of an ice mass advances up a slope. Its length may be appropriately measured in centimetres or kilometres, depending on the circumstances of formation. NMDCO_relaxed.owl ENVO:00000156 biolink:NamedThing desert oasis A small, isolated, fertile or green area in a desert region, usually having a spring or well. NMDCO_relaxed.owl ENVO:00000166 biolink:NamedThing atoll An oceanic island, often having a characteristic ring-like shape surrounding a lagoon. Atolls are formed when coral reef grows around a volcanic island that later subsides into the ocean. NMDCO_relaxed.owl ENVO:00000170 biolink:NamedThing dune A hill of sand built by eolian processes. NMDCO_relaxed.owl ENVO:00000276 biolink:NamedThing drumlin An elongated whale-shaped hill formed by glacial action. Its long axis is parallel with the movement of the ice, with the blunter end facing into the glacial movement. Drumlins are sometimes compared to kames, but their formation is distinctively different. A drumlin is not originally shaped by meltwater, but by the ice itself and has a quite regular shape. It occurs in fine grained material, such as clay or shale, not in sands and gravels. And drumlins usually have concentric layers of material, as the ice successively plasters new layers in its movement. NMDCO_relaxed.owl ENVO:01000943 biolink:NamedThing vegetated hill A hill which has a surface that is partially or wholly covered by plant communities. NMDCO_relaxed.owl ENVO:03501238 biolink:NamedThing hillock A hill which is small and usually separated from a larger group of hills such as a range. NMDCO_relaxed.owl ENVO:00000171 biolink:NamedThing river valley A valley that contains, and has been formed by, a river. NMDCO_relaxed.owl ENVO:00000172 biolink:NamedThing sandy desert A desert plain characterized by a surface veneer of sand. NMDCO_relaxed.owl ENVO:00000173 biolink:NamedThing rocky desert A desert plain characterized by a surface veneer of rock. NMDCO_relaxed.owl ENVO:00000183 biolink:NamedThing stony desert A desert plain characterized by a surface veneer of gravel or stones. NMDCO_relaxed.owl ENVO:01000382 biolink:NamedThing cold desert A cold desert is a desert which has hot summers and cold, dry winters with temperatures below 0 degrees Celsius NMDCO_relaxed.owl ENVO:00000176 biolink:NamedThing elevated landform A landform elevated above the surrounding area. NMDCO_relaxed.owl ENVO:01001886 biolink:NamedThing landform A solid astronomical body part which has been formed from and is composed primarily of the matter of that astronomical body. NMDCO_relaxed.owl ENVO:00000309 biolink:NamedThing depressed landform A landform sunken or depressed below the surrounding area. NMDCO_relaxed.owl ENVO:00000480 biolink:NamedThing peak The summit of a mount. NMDCO_relaxed.owl ENVO:00000510 biolink:NamedThing meander neck A landform which is the narrowest part of a meander. NMDCO_relaxed.owl ENVO:00002184 biolink:NamedThing subsurface landform NMDCO_relaxed.owl ENVO:01001885 biolink:NamedThing submerged landform A landform which is submerged underneath a body of liquid. NMDCO_relaxed.owl ENVO:00000179 biolink:NamedThing mesa An elevated area of land with a flat top and sides that are usually steep cliffs. Mesas form in areas where horizontally layered rocks are uplifted by tectonic activity. NMDCO_relaxed.owl ENVO:01001491 biolink:NamedThing flattened elevation An elevation which is flattened across its highest surface. NMDCO_relaxed.owl ENVO:00000182 biolink:NamedThing plateau An elevated and comparatively level expanse of land. NMDCO_relaxed.owl ENVO:00000287 biolink:NamedThing butte An isolated hill with steep sides and a small flat top, smaller than mesas and plateaus. Buttes are formed by erosion when a cap of hard rock, usually of volcanic origin, covers a layer of softer rock that is easily worn away. This hard rock avoids erosion while the rock around it wears down. NMDCO_relaxed.owl ENVO:00000181 biolink:NamedThing nunatak The exposed summit of a ridge, mountain, or peak not covered with ice or snow within an ice field or glacier. The term is typically used in areas where a permanent ice mass is present. NMDCO_relaxed.owl ENVO:00000185 biolink:NamedThing raised mire Rain-fed, potentially deep peatlands occurring principally in lowland areas across much of Northern Europe, as well as in the former USSR, North America and parts of the southern hemisphere. NMDCO_relaxed.owl ENVO:00000186 biolink:NamedThing string mire Flat or concave peatlands with a string-like pattern of hummocks (hence the name), found principally in northern Scandinavia but occurring in the western parts of the former USSR and in North America. A few examples exist in northern Britain. NMDCO_relaxed.owl ENVO:00000187 biolink:NamedThing tundra mire Peatlands with a shallow peat layer, only about 500 mm thick, dominated by sedges and grasses. They form in permafrost areas, covering around 110,000 to 160,000 km2 in Alaska, Canada, and the former USSR. NMDCO_relaxed.owl ENVO:00000188 biolink:NamedThing palsa mire Peatland typified by characteristic high mounds, each with a permanently frozen core, with wet depressions between the mounds. NMDCO_relaxed.owl ENVO:00000189 biolink:NamedThing peat swamp Forested peatlands including both rain- and groundwater-fed types, commonly recorded in tropical regions with high rainfall. NMDCO_relaxed.owl ENVO:00000232 biolink:NamedThing fen A freshwater peat land with chemically basic (which roughly means alkaline) ground water. NMDCO_relaxed.owl ENVO:00000511 biolink:NamedThing blanket bog A peatland whose development is mostly independent of basins or topographical features where water collects; it simply covers the landscape like a blanket. Peat develops due to a continuous supply of water from rainfall, maintaining waterlogged conditions on the ground. Blanket bogs are ombrotrophic or rain fed, and as a result their pH lies between 3.5 and 4.2. NMDCO_relaxed.owl ENVO:00002268 biolink:NamedThing sphagnum bog A peatland dominated by species of the Bryophyte Sphagnum. NMDCO_relaxed.owl ENVO:00000190 biolink:NamedThing abyssal feature Feature on the ocean floor at a depth of 3500 - 6000 meters. NMDCO_relaxed.owl ENVO:01000058 biolink:NamedThing kelp forest Kelp forests are underwater areas with a high density of kelp. They are recognized as one of the most productive and dynamic ecosystems on Earth. Smaller areas of anchored kelp are called kelp beds. NMDCO_relaxed.owl ENVO:00000194 biolink:NamedThing scree Broken rock that appears at the bottom of crags, mountain cliffs or valley shoulders. NMDCO_relaxed.owl ENVO:00001995 biolink:NamedThing rock A rock is a naturally occurring solid aggregate of one or more minerals or mineraloids. NMDCO_relaxed.owl ENVO:00002008 biolink:NamedThing dust Particulate environmental material with diameters less than 500 micrometers. NMDCO_relaxed.owl ENVO:00002040 biolink:NamedThing wood NMDCO_relaxed.owl ENVO:00002164 biolink:NamedThing fossil material A solid environmental material which is formed by the replacement of organic substances (including those in soils and sediments) with mineral material. NMDCO_relaxed.owl ENVO:01000000 biolink:NamedThing humus Organic matter in soil which has reached a point of stability, where it will break down no further and might, if conditions do not change, remain essentially as it is for centuries, or millennia. NMDCO_relaxed.owl ENVO:01000018 biolink:NamedThing gravel An environmental material which is composed primarily of pieces of gravel. NMDCO_relaxed.owl ENVO:01000480 biolink:NamedThing glass Glass is an amorphous (non-crystalline) solid which is often transparent. NMDCO_relaxed.owl ENVO:01000560 biolink:NamedThing charcoal Charcoal is a light, black residue, consisting of carbon and any remaining ash, obtained by removing water and other volatile constituents from animal and vegetation substances. Charcoal is usually produced by slow pyrolysis, the heating of wood or other substances in the absence of oxygen. NMDCO_relaxed.owl ENVO:01000660 biolink:NamedThing tephra Tephra is fragmental material produced by a volcanic eruption regardless of composition, fragment size or emplacement mechanism. NMDCO_relaxed.owl ENVO:01000845 biolink:NamedThing crystal A solid material whose constituents, such as atoms, molecules or ions, are arranged in a highly ordered microscopic structure, forming a crystal lattice that extends in all directions. NMDCO_relaxed.owl ENVO:01001121 biolink:NamedThing plant matter Organic material which is primarily composed of plant structures, living or dead. NMDCO_relaxed.owl ENVO:01001125 biolink:NamedThing ice An ice is an environmental material which is either frozen or which is maintained in a solid state by gravitational forces or pressure. NMDCO_relaxed.owl ENVO:01001231 biolink:NamedThing kerogen Organic material which is in a solid phase and contained in sedimentary rock. NMDCO_relaxed.owl ENVO:01001525 biolink:NamedThing hard-frozen soil Frozen soil which is firmly cemented by water ice, is subject to brittle failure, and exhibits practically no consolidation under load. NMDCO_relaxed.owl ENVO:01001528 biolink:NamedThing friable-frozen soil Frozen soil which has very low total water content and is not cemented by ice; its compressibility is the same as that of unfrozen soils having the same composition, total water content and density. NMDCO_relaxed.owl ENVO:01001561 biolink:NamedThing gel An environmental material which is solid, jelly-like, and exhibits no flow when in steady state material and which contains liquid dispersed in and held in place by cross-linked structures of a solid medium. NMDCO_relaxed.owl ENVO:01001646 biolink:NamedThing amorphous solid A solid material which does not have a regularly organised internal structure. NMDCO_relaxed.owl ENVO:01001850 biolink:NamedThing frost An environmental material which is primarily composed of minute ice crystals forming a fuzzy layer over a cold surface by direct deposition of water vapor. NMDCO_relaxed.owl ENVO:02000090 biolink:NamedThing ash An environmental material that is the non-aqueous, non-gaseous residues that remain after something is burned. NMDCO_relaxed.owl ENVO:03501307 biolink:NamedThing ceramic A solid environmental material that is hard, brittle, heat-resistant and corrosion-resistant, made by shaping and then firing a nonmetallic mineral at a high temperature. NMDCO_relaxed.owl ENVO:00000332 biolink:NamedThing doline A closed depression draining underground in karst, of simple but variable form, e.g. cylindrical, conical, bowl- or dish-shaped. From a few to many hundreds of metres in dimensions. NMDCO_relaxed.owl ENVO:00000499 biolink:NamedThing trough A linear structural depression that extends laterally over a distance, while being less steep than a trench. A trough can be a narrow basin or a geologic rift. There are various oceanic troughs, troughs found under oceans; examples include the rift along the mid-oceanic ridge and the Cayman Trough. NMDCO_relaxed.owl ENVO:00000536 biolink:NamedThing moatan An annular depression that may not be continuous, located at the base of many seamounts, islands, and other isolated elevations. NMDCO_relaxed.owl ENVO:00000539 biolink:NamedThing geographic sill The low part of a gap or saddle separating basins. NMDCO_relaxed.owl ENVO:01000275 biolink:NamedThing structural basin A structural basin is a geological depression formed by tectonic warping of previously flat lying rock strata. NMDCO_relaxed.owl ENVO:01000649 biolink:NamedThing trench A trench is a type of excavation or depression in the ground that is generally deeper than it is wide (as opposed to a wider gully or ditch), and narrow compared to its length (as opposed to a simple hole). NMDCO_relaxed.owl ENVO:01001871 biolink:NamedThing pit A depression in the ground resembling a hole or cavity, either natural or anthropogenic. NMDCO_relaxed.owl ENVO:00000279 biolink:NamedThing saline pan A flat expanse of ground covered with salt and other minerals, usually shining white under the sun. A salt pan is formed where water pools. A saline pan would be a lake or a pond if it were located in a climate where the rate of water evaporation were not faster than the rate of water precipitation, i.e., if it were not in a desert. If the water is unable to drain into the ground, it remains on the surface until it evaporates, leaving behind whatever minerals were dissolved. Over thousands of years, the minerals (usually salts) accumulate on the surface. NMDCO_relaxed.owl ENVO:00000198 biolink:NamedThing ice-covered lake A lake permanently covered by ice. NMDCO_relaxed.owl ENVO:00000200 biolink:NamedThing periglacial lake A lake, part of whose margin is formed by an ice mass, ice cap or glacier, the ice having obstructed the natural drainage of the land. NMDCO_relaxed.owl ENVO:00000435 biolink:NamedThing proglacial lake A lake formed either by the damming action of a moraine or ice dam during the retreat of a melting glacier, or one formed by meltwater trapped against an ice mass due to isostatic depression of the crust around the ice. NMDCO_relaxed.owl ENVO:00000487 biolink:NamedThing paternoster lake One of a series of glacial lakes connected by a single stream or a braided stream system. NMDCO_relaxed.owl ENVO:00000203 biolink:NamedThing rift lake A lake which fills a depression that has formed as a result of subsidence along a a rift zone, an area of extensional tectonics in the continental crust. NMDCO_relaxed.owl ENVO:00000206 biolink:NamedThing marine neritic zone The water mass of an ocean directly above a continental shelf. NMDCO_relaxed.owl ENVO:00000207 biolink:NamedThing oceanic zone The water mass of an ocean that is not above a continental shelf. NMDCO_relaxed.owl ENVO:00000208 biolink:NamedThing marine pelagic zone An open ocean region. NMDCO_relaxed.owl ENVO:00000209 biolink:NamedThing marine photic zone The zone of an ocean from the surface to where photosynthesis can occur, due to the penetration of light. NMDCO_relaxed.owl ENVO:00000210 biolink:NamedThing marine aphotic zone The zone of an ocean below 200m, in which photosynthesis cannot occur due to the lack of light. NMDCO_relaxed.owl ENVO:01000061 biolink:NamedThing marine wind mixed layer The upper part of the marine water column with generally uniform properties resulting from wind-driven mixing. NMDCO_relaxed.owl ENVO:00000211 biolink:NamedThing marine bathypelagic zone The one of an ocean below the 10degC thermocline down to a temperature of 4degC. NMDCO_relaxed.owl ENVO:00000212 biolink:NamedThing marine abyssalpelagic zone The zone of the ocean below the bathypelagic zone, with its lowest boundary at about 6000m. NMDCO_relaxed.owl ENVO:00000213 biolink:NamedThing marine mesopelagic zone The zone of an ocean immediately below the photic zone down to a depth where the water temperature is 10degC (the thermocline). NMDCO_relaxed.owl ENVO:00000214 biolink:NamedThing hadalpelagic zone The zone of an ocean in oceanic trenches, lying between 6000m and 10,000m. NMDCO_relaxed.owl ENVO:00000216 biolink:NamedThing fumarole A hole in the Earth's crust from which steam and gases are emitted. NMDCO_relaxed.owl ENVO:01000667 biolink:NamedThing geological fracture A geological fracture is any separation in a geologic formation, such as a joint or a fault that divides a mass of rock into two or more pieces. NMDCO_relaxed.owl ENVO:00000247 biolink:NamedThing volcano An opening, or rupture, in the Earth's surface or crust, which allows hot, molten rock, ash and gases to escape from deep below the surface. NMDCO_relaxed.owl ENVO:00000320 biolink:NamedThing crevasse A deep fissure in snow or ice. NMDCO_relaxed.owl ENVO:00009726 biolink:NamedThing strand crack Fissure at the junction between an inland ice sheet, ice piedmont or ice rise and an ice shelf, the latter being subject to the rise and fall of the tide. NMDCO_relaxed.owl ENVO:01000294 biolink:NamedThing crevice A deep fissure in rock. NMDCO_relaxed.owl ENVO:01000668 biolink:NamedThing geological fault A geological fault is a planar fracture or discontinuity in a volume of rock, across which there has been significant displacement as a result of rock mass movement. NMDCO_relaxed.owl ENVO:01000670 biolink:NamedThing vein A vein is a geological fracture which is filled with minerals precipitated out of an aqueous solution. NMDCO_relaxed.owl ENVO:01000672 biolink:NamedThing geological joint A joint is a geological fracture which has no measureable shear displacement NMDCO_relaxed.owl ENVO:01000673 biolink:NamedThing shear fracture A geological fracture across which shear displacement has occurred NMDCO_relaxed.owl ENVO:01000674 biolink:NamedThing microfracture A microfracture is a small fracture which is found in a portion of solid material along which further fracturing tends to occur. Microfractures are considered imperfections which to pre-exist any fractures formed by the application of stress to a material. NMDCO_relaxed.owl ENVO:03600068 biolink:NamedThing ice wedge A geological fracture which is formed during winter months by a narrow or thin piece of ice. NMDCO_relaxed.owl ENVO:03600083 biolink:NamedThing mofetta A geological fracture, found near volacnoes in the final phase of thier activity, chiefly discharging carbon dioxide and possibly other vapors. NMDCO_relaxed.owl ENVO:00000217 biolink:NamedThing solfatara A fumarole that emits sulfurous gases. NMDCO_relaxed.owl ENVO:00000218 biolink:NamedThing black smoker A hydrothermal vent found on the ocean floor. The vents are formed in fields hundreds of meters wide when superheated water from below the Earth's crust comes through the ocean floor. The superheated water is rich in dissolved minerals from the crust, most notably sulfides, which crystallize to create a chimney-like structure around each vent. When the superheated water in the vent comes in contact with the cold ocean water, many minerals are precipitated, creating the distinctive black color. The metal sulfides that are deposited can become massive sulfide ore deposits in time. NMDCO_relaxed.owl ENVO:01000122 biolink:NamedThing marine hydrothermal vent A marine hydrothermal vent is a marine benthic feature where heat generated due to tectonic activity, either at divergent plate boundaries or convergent ocean plates where back-arc spreading occurs, is released or 'vented' to the surface. The resultant high temperature water jets are laden with dissolved metals and minerals. NMDCO_relaxed.owl ENVO:01000257 biolink:NamedThing white smoker A hydrothermal vent found on the ocean floor which emits lighter-hued minerals, such as those containing barium, calcium and silicon. These alkaline hydrothermal vents also continuously generate acetyl thioesters, providing both the starting point for more complex organic molecules and the energy needed to produce them. NMDCO_relaxed.owl ENVO:00000219 biolink:NamedThing landlocked sea A sea that is not connected with an ocean. NMDCO_relaxed.owl ENVO:01001786 biolink:NamedThing inland sea A sea which shalowly covers central areas of continents during periods of high sea level that result in marine transgressions. NMDCO_relaxed.owl ENVO:00000224 biolink:NamedThing slightly stratified estuary An estuary in which river output is less than the marine input, resulting in the mixing of the whole water column by current-induced turbulence, such that salinity varies more longitudinally rather than vertically. NMDCO_relaxed.owl ENVO:00000225 biolink:NamedThing highly stratified estuary An estuary whose river output and marine input are more even, with river flow still dominant; turbulence induces more mixing of salt water upward than the reverse. NMDCO_relaxed.owl ENVO:00000226 biolink:NamedThing saline wedge estuary An estuary in which river output greatly exceeds marine input, resulting in little mixing and thus a sharp contrast between fresh surface water and saline bottom water. NMDCO_relaxed.owl ENVO:00000228 biolink:NamedThing inverse estuary An estuary which is located in regions where evaporation greatly exceeds the inflow of fresh water, forming a zone of maximum salinity towards which both riverine and marine water masses flow, before sinking and spreading along the bottom in both seaward and landward directions. NMDCO_relaxed.owl ENVO:00000229 biolink:NamedThing intermittent estuary An estuary which varies dramatically in its volume as a result of intermittent freshwater input, and is capable of changing from a wholly marine embayment to any other type of estuary. NMDCO_relaxed.owl ENVO:00002137 biolink:NamedThing brackish estuary An estuary which is composed primarily of brackish water. NMDCO_relaxed.owl ENVO:01001653 biolink:NamedThing well-mixed estuary An estuary in which mixing by tidal forcing exceeds the force of riverine output, resulting in thorough homogenisation of the estuary's water column and the disappearance of a vertical salinity gradient and the freshwater-seawater boundary. NMDCO_relaxed.owl ENVO:00000231 biolink:NamedThing moor A wetland found in upland areas, characterised by acidic soils. NMDCO_relaxed.owl ENVO:00000236 biolink:NamedThing dambo A class of complex shallow wetlands in central, southern and eastern Africa, particularly in Zambia and Zimbabwe. They are generally found in higher rainfall flat plateau areas, and have river-like branching forms which may be nowhere very large, but common enough to add up to a large area. NMDCO_relaxed.owl ENVO:00000239 biolink:NamedThing pocasin A palustrine wetland with deep, acidic, sandy, peat soils. Groundwater saturates the soil except during brief seasonal dry spells and during prolonged droughts. Pocosin soils are nutrient deficient (oligotrophic), especially in phosphorus. NMDCO_relaxed.owl ENVO:00000235 biolink:NamedThing carr A fen which has developed to the point where it supports trees. NMDCO_relaxed.owl ENVO:00000237 biolink:NamedThing hydromorphic/phreatic dambo A danbo associated with a headwater. NMDCO_relaxed.owl ENVO:00000238 biolink:NamedThing fluvial dambo A dambo associated with a river. NMDCO_relaxed.owl ENVO:00000241 biolink:NamedThing tidal mudflat A level tract lying at a small depth below the surface of water, or alternately covered and left bare by the tide. NMDCO_relaxed.owl ENVO:00000242 biolink:NamedThing lacustrine mudflat A wetland that forms when mud is deposited by a stream. NMDCO_relaxed.owl ENVO:00000249 biolink:NamedThing lateral moraine The parallel ridges of till deposited along the sides of an alglacier. The unconsolidated debris is deposited on top of the glacier by frost shattering of the valley walls and from tributary streams flowing into the valley. The till is carried along the glacial margin until the glacier melts. NMDCO_relaxed.owl ENVO:00000250 biolink:NamedThing medial moraine A moriane formed when the inside lateral moraines of two glaciers merge together. They form a ridge down the center of the combined glaciers. NMDCO_relaxed.owl ENVO:00000251 biolink:NamedThing ground moraine A till covered area with irregular topography and no ridges, often forming gently rolling hills or plains. Forms by the accumulation of till under the ice by lodgement, but may also be deposited as the glacier retreats. NMDCO_relaxed.owl ENVO:00000252 biolink:NamedThing terminal moraine Ridges of unconsolidated debris deposited at the snout or end of the glacier. They usually reflect the shape of the glacier's terminus. NMDCO_relaxed.owl ENVO:00000260 biolink:NamedThing prairie An area of land of low topographic relief that historically supported grasses and herbs, with few trees, and having generally a mesic (moderate or temperate) climate. Dominated by tall grasses (contrast steppe). NMDCO_relaxed.owl ENVO:00000261 biolink:NamedThing savanna A grassland of the tropics or subtropics with scattered trees. NMDCO_relaxed.owl ENVO:00000262 biolink:NamedThing steppe A plain without trees (apart from those near rivers and lakes); it is similar to a prairie, although a prairie is generally considered as being dominated by tall grasses, while short grasses are said to be normal in the steppe. It may be semi-desert, or covered with grass or shrubs or both, depending on the season and latitude. NMDCO_relaxed.owl ENVO:01000888 biolink:NamedThing area of gramanoid or herbaceous vegetation An area of a planet's surface which is primarily covered by gramanoid or herbaceous vegetation and which is not subject to intensive management by humans. This area is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:00000264 biolink:NamedThing seamount A mountain rising from the ocean seafloor that does not reach to the water's surface (sea level), and thus is not an island. Typically formed from volcanoes that rise abruptly and are usually found rising from a seafloor of 1,000 - 4,000 meters depth. Independent features that rise to at least 1,000 meters above the seafloor. NMDCO_relaxed.owl ENVO:01001453 biolink:NamedThing terrestrial mountain A mountain which is located on land and which is bounded by an atmosphere or outer space. NMDCO_relaxed.owl ENVO:01001454 biolink:NamedThing polar mountain A mountain that is part of a polar environment. NMDCO_relaxed.owl ENVO:01001455 biolink:NamedThing temperate mountain A mountain that is part of a temperate environment. NMDCO_relaxed.owl ENVO:01001456 biolink:NamedThing tropical mountain A mountain that is part of a tropical environment. NMDCO_relaxed.owl ENVO:01001459 biolink:NamedThing high-elevation mountain A mountain which has a maximum elevation greater than 2500 metres above sea level. NMDCO_relaxed.owl ENVO:01001460 biolink:NamedThing mid-elevation mountain A mountain which has a maximum elevation between 300 and 2499 metres above sea level and slopes greater than or equal to two degrees of inclination. NMDCO_relaxed.owl ENVO:00000265 biolink:NamedThing guyot A flat-topped seamount. NMDCO_relaxed.owl ENVO:00000267 biolink:NamedThing submarine canyon A steep-sided valley on the sea floor of the continental slope. Many submarine canyons are found as extensions to large rivers; however there are many that have no such association. Canyons cutting the continental slopes have been found at depths greater than 2 km below sea level. Many submarine canyons continue as submarine channels across continental rise areas and may extend for hundreds of kilometers. NMDCO_relaxed.owl ENVO:00000268 biolink:NamedThing lake bed The ground surface that lies beneath a lake. NMDCO_relaxed.owl ENVO:00000383 biolink:NamedThing stream bed The channel bottom of a stream; the physical confine of the normal water flow. NMDCO_relaxed.owl ENVO:00000512 biolink:NamedThing pond bed The ground surface that lies beneath a pond. NMDCO_relaxed.owl ENVO:00000513 biolink:NamedThing reservoir bed The ground surface that lies beneath a reservoir. NMDCO_relaxed.owl ENVO:01001378 biolink:NamedThing marine bed A submerged bed which underlies a marine water body. NMDCO_relaxed.owl ENVO:00000269 biolink:NamedThing land-tied island A continental island connected to its adjacent land by a natural feature, such as a causeway. NMDCO_relaxed.owl ENVO:1000749 biolink:NamedThing microcontinental island An island created when a continent is rifted. NMDCO_relaxed.owl ENVO:00000275 biolink:NamedThing ocean trench Hemispheric-scale long but narrow topographic depressions of the sea floor. They are the deepest parts of the ocean floor. NMDCO_relaxed.owl ENVO:00000281 biolink:NamedThing fault escarpment An escarpment resulting from a fault. NMDCO_relaxed.owl ENVO:00000282 biolink:NamedThing esker A long, winding ridge of stratified sand and gravel which occur in glaciated and formerly glaciated regions of Europe and North America. NMDCO_relaxed.owl ENVO:00000283 biolink:NamedThing ridge A long and narrow elevation with steep sides. NMDCO_relaxed.owl ENVO:00000429 biolink:NamedThing arete A ridge which is jagged, narrow and separates glacier valleys or cirques. NMDCO_relaxed.owl ENVO:00000441 biolink:NamedThing terracette A ridge on a hillside formed when saturated soil particles expand, then contract as they dry, causing them to move slowly downhill. NMDCO_relaxed.owl ENVO:00000528 biolink:NamedThing ice cap ridge A linear elevation on an icecap. NMDCO_relaxed.owl ENVO:00000529 biolink:NamedThing beach ridge A ridge of sand just inland and parallel to the beach, usually in series. NMDCO_relaxed.owl ENVO:00000381 biolink:NamedThing massif A section of the Earths's crust that is demarcated by faults or flexures. In the movement of the crust, a massif tends to retain its internal structure while being displaced as a whole. NMDCO_relaxed.owl ENVO:00000398 biolink:NamedThing volcanic cone Built by fragments (called ejecta) thrown up (ejected) from a volcanic vent, piling up around the vent in the shape of a cone with a central crater. NMDCO_relaxed.owl ENVO:00000481 biolink:NamedThing pinnacle A tall, slender, spire-shaped rock projecting from a level or more gently sloping surface. NMDCO_relaxed.owl ENVO:02000110 biolink:NamedThing open-pit mine A surface mine that utilizes a technique of extracting rock or minerals from the earth by their removal from an open pit or borrow. NMDCO_relaxed.owl ENVO:00000285 biolink:NamedThing quicksand bed A bed which is composed of quicksand forming a soft, shifting mass that yields easily to pressure. NMDCO_relaxed.owl ENVO:00010504 biolink:NamedThing surface layer A layer of some material entity which is adjacent to one or more of its external boundaries and directly interacts with its immediate surroundings. NMDCO_relaxed.owl ENVO:01001192 biolink:NamedThing sediment surface The surface layer of a mass of sediment. NMDCO_relaxed.owl ENVO:01001311 biolink:NamedThing solid surface layer A surface layer which is composed primarily of solid environmental material. NMDCO_relaxed.owl ENVO:01001673 biolink:NamedThing fluid surface layer A surface layer which is composed primarily of some liquid or gas. NMDCO_relaxed.owl ENVO:00000292 biolink:NamedThing watershed The separation between neighbouring drainage basins (catchments). In hilly country, the divide lies along topographical peaks and ridges, but in flat country or on a high plateau (especially where the ground is marshy) the divide may be invisible - just a more or less notional line on the ground on either side of which falling raindrops will start a journey to different rivers, and even to different sides of a country or continent. NMDCO_relaxed.owl ENVO:00000344 biolink:NamedThing grain of desert sand NMDCO_relaxed.owl ENVO:00000345 biolink:NamedThing grain of beach sand NMDCO_relaxed.owl ENVO:00000346 biolink:NamedThing grain of acid dune sand NMDCO_relaxed.owl ENVO:01000136 biolink:NamedThing drop stone A piece of rock which fell vertically through the water column into finer-grained water-deposited sedimentary rocks. NMDCO_relaxed.owl ENVO:01000443 biolink:NamedThing salt mass An accumulation of a salt, typically sodium chloride. NMDCO_relaxed.owl ENVO:01000495 biolink:NamedThing stone exterior wall A stone exterior wall is an exterior wall that is composed primarily of rock. NMDCO_relaxed.owl ENVO:01000500 biolink:NamedThing brick exterior wall A brick exterior wall is an exterior wall that is built from bricks. NMDCO_relaxed.owl ENVO:01000645 biolink:NamedThing solid planetary core A solid planetary core is a planetary core which is primarily composed of solid material. NMDCO_relaxed.owl ENVO:01000646 biolink:NamedThing lithosphere A lithosphere is the outermost shell of a terrestrial-type planet or natural satellite that is defined by its rigid mechanical properties. NMDCO_relaxed.owl ENVO:01001097 biolink:NamedThing tectonic plate A part of a lithosphere which is separated by other such parts by geographic faults or similar geomorphological discontinuities. NMDCO_relaxed.owl ENVO:01001490 biolink:NamedThing intrusion A mass of environmental material which has been formed as the result of its transport into an existing mass of another material. NMDCO_relaxed.owl ENVO:01001665 biolink:NamedThing soil cryoturbate A mass of soil moved or disturbed by frost action. NMDCO_relaxed.owl ENVO:01001781 biolink:NamedThing part of a landmass A solid astronomical body part which is part of the landmass of that body. NMDCO_relaxed.owl ENVO:03000110 biolink:NamedThing cryoform A solid astronomical body part which is primarily composed of a continuous mass of snow and/or ice. NMDCO_relaxed.owl ENVO:06105106 biolink:NamedThing plastisphere A part of an astronomical body which includes, as parts, all the entities which are composed primarily of plastic and which are within the gravitational sphere of influence of that body. NMDCO_relaxed.owl ENVO:00000293 biolink:NamedThing continental divide A watershed such that water falling on one side of the line eventually travels to one ocean or body of water, and water on the other side travels to another, generally on the opposite side of the continent. NMDCO_relaxed.owl ENVO:00000295 biolink:NamedThing fish hatchery A hatchery in which the eggs of fish are hatched under artificial conditions. NMDCO_relaxed.owl ENVO:01001874 biolink:NamedThing poultry hatchery A hatchery in which the eggs of poultry are hatched under artificial conditions. NMDCO_relaxed.owl ENVO:00000297 biolink:NamedThing paddy field A flooded parcel of arable land used for growing rice and other semiaquatic crops. NMDCO_relaxed.owl ENVO:01000348 biolink:NamedThing maize field A field used for the cultivation of corn or related crop plants. NMDCO_relaxed.owl ENVO:00000298 biolink:NamedThing marine iceberg A large mass of detached land ice in the sea or stranded in shallow water. NMDCO_relaxed.owl ENVO:01001345 biolink:NamedThing floating ice mass An ice mass which is suspended in a water body, being sufficiently buoyant for part of the mass to breach the surface of that water body. NMDCO_relaxed.owl ENVO:01001507 biolink:NamedThing floating ice calf An ice calf which is suspended in a water mass, being partially exposed to an atmosphere. NMDCO_relaxed.owl ENVO:01001517 biolink:NamedThing drift ice mass A floating mass of ice which is 1) unattached to land or land-fast ice and 2) moved by the action of winds or currents. NMDCO_relaxed.owl ENVO:01000293 biolink:NamedThing ice mass A mass of water ice. NMDCO_relaxed.owl ENVO:01001276 biolink:NamedThing water ice layer A solid layer which is primarily composed of some water-based ice. NMDCO_relaxed.owl ENVO:00000301 biolink:NamedThing chaparral area A shrubland area found primarily in regions with a Mediterranean climate (mid, wet winters and hot dry summers) often shaped by wildfires. NMDCO_relaxed.owl ENVO:01000237 biolink:NamedThing coastal scrubland A coastal scrubland is a scrubland which is part of a coast. NMDCO_relaxed.owl ENVO:01000242 biolink:NamedThing desert scrubland A scrubland which is located in a desert. NMDCO_relaxed.owl ENVO:00000303 biolink:NamedThing sea coast The general region of indefinite width that extends from the sea inland to the first major change in terrain features. NMDCO_relaxed.owl ENVO:01000688 biolink:NamedThing lake coast The general region of indefinite width that extends from a lake inland to the first major change in terrain features. NMDCO_relaxed.owl ENVO:00000306 biolink:NamedThing spit A deposition landform found off coasts. A spit is a type of bar or beach that develops where a re-entrant occurs, such as at a cove, bay, ria, or river mouth. Spits are formed by the movement of sediment (typically sand) along a shore by a process known as longshore drift. Where the direction of the shore turns inland (reenters) the longshore current spreads out or dissipates. No longer able to carry the full load, much of the sediment is dropped. This causes a bar to build out from the shore, eventually becoming a spit. NMDCO_relaxed.owl ENVO:00000420 biolink:NamedThing tombolo A deposition landform such as a spit or bar which forms a narrow piece of land between an island or offshore rock and a mainland shore, or between two islands or offshore rocks. They usually form because the island causes wave refraction, depositing sand and shingle moved by longshore drift in each direction around the island where the waves meet. Eustatic sea level rise may also contribute to accretion as material is pushed up with rising sea levels. NMDCO_relaxed.owl ENVO:00000310 biolink:NamedThing meteor impact crater A crater caused by the impact of a meteor. NMDCO_relaxed.owl ENVO:00000315 biolink:NamedThing bajada A convergence of neighboring alluvial fans into a single apron of deposits against a slope. NMDCO_relaxed.owl ENVO:00000316 biolink:NamedThing intertidal zone The area of the foreshore and seabed that is exposed to the air at low tide and submerged at high tide, i.e., the area between tide marks. NMDCO_relaxed.owl ENVO:00000318 biolink:NamedThing high tide zone The tide zone that is flooded during high tide only, and is a highly saline environment. NMDCO_relaxed.owl ENVO:00000319 biolink:NamedThing low tide zone The tidal zone that is mostly submerged, only being exposed at the point of low tide and for a longer period of time during extremely low tides. NMDCO_relaxed.owl ENVO:01000066 biolink:NamedThing marine anoxic zone Marine anoxic zones are areas of marine water that are depleted of dissolved oxygen. This condition is generally found in areas that have restricted water exchange. In most cases, oxygen is prevented from reaching the deeper levels by a physical barrier (sill) as well as by a pronounced density stratification. Anoxic conditions will occur if the rate of oxidation of organic matter by bacteria is greater than the supply of dissolved oxygen. NMDCO_relaxed.owl ENVO:01000124 biolink:NamedThing marine supra-littoral zone The supralittoral zone is the area above the spring high tide line that is regularly splashed, but not submerged by ocean water. Seawater penetrates these elevated areas only during storms with high tides. NMDCO_relaxed.owl ENVO:01000126 biolink:NamedThing marine sub-littoral zone The marine sublittoral zone is part of the marine littoral zone which is permanently covered by seawater. In physical oceanography, the sublittoral zone refers to coastal regions with significant tidal flows and energy dissipation, including non-linear flows, internal waves, river outflows and oceanic fronts. In practice, this typically extends to the edge of the continental shelf, with depths around 200 meters. In marine biology, the sublittoral refers to the areas where sunlight reaches the ocean floor, that is, where the water is never so deep as to take it out of the photic zone. NMDCO_relaxed.owl ENVO:01000410 biolink:NamedThing marine eulittoral zone The eulittoral zone extends from the spring high tide line, which is rarely inundated, to the spring low tide line, which is rarely not inundated. The wave action and turbulence of recurring tides shapes and reforms cliffs, gaps, and caves, offering a huge range of habitats for sedentary organisms. NMDCO_relaxed.owl ENVO:01000411 biolink:NamedThing infralittoral zone A zone which is part of the sublittoral zone and is dominated by algae. This zone usually extends up to five metres below the low water mark. NMDCO_relaxed.owl ENVO:01000412 biolink:NamedThing circalittoral zone A zone which is part of the sublittoral zone and is dominated by sessile animals such as oysters. This zone usually begins at a depth greater than the infralittoral zone. NMDCO_relaxed.owl ENVO:01001341 biolink:NamedThing marine tidal flow zone An environmental zone in which varying gravitational forces from astronomical bodies, combined with the rotation of the astronomical body containing the zone, cause marine waters to undergo periodic depth oscillations (tides). NMDCO_relaxed.owl ENVO:00000327 biolink:NamedThing speleothem A secondary mineral deposit formed in caves, most commonly calcite. NMDCO_relaxed.owl ENVO:02000150 biolink:NamedThing uranium deposit A mineral deposit that contains uranium ore. NMDCO_relaxed.owl ENVO:00000328 biolink:NamedThing vadose zone An interface layer which 1) is primarily composed of solid materials, 2) separates the land surface and phreatic zone, and 3) contains groundwater at atmospheric pressure. NMDCO_relaxed.owl ENVO:01001275 biolink:NamedThing solid layer A layer which is primarily composed of some solid material, allowing for non-solid parts such as interstitial pockets of gas or liquid. NMDCO_relaxed.owl ENVO:00012408 biolink:NamedThing aquifer An underground layer of water-bearing permeable rock or unconsolidated materials (gravel, sand, silt, or clay) from which groundwater can be usefully extracted using a water well. NMDCO_relaxed.owl ENVO:01000282 biolink:NamedThing sedimentary stratum A solid layer which is composed primarily of sedimentary rock or soil. NMDCO_relaxed.owl ENVO:01000747 biolink:NamedThing regolith A solid layer which is composed primarily of loose, heterogeneous, superficial material covering solid rock. NMDCO_relaxed.owl ENVO:03600011 biolink:NamedThing mineral horizon A soil horizon which is primarily composed of mineral material. NMDCO_relaxed.owl ENVO:01001684 biolink:NamedThing interface layer A layer which separates two portions of environmental material which possess 1) differing compositions, 2) a discontinuity of some property, or 3) some derivative of some property in a direction normal to the interface. NMDCO_relaxed.owl ENVO:01001677 biolink:NamedThing fluid interface layer A surface layer which separates two portions of fluid with respect to either 1) a discontinuity of some fluid property or 2) some derivative of one of these properties in a direction normal to the interface. NMDCO_relaxed.owl ENVO:03501369 biolink:NamedThing seam surface An interface layer which is formed where either two parts of a material entity or two separate material entities touch or are attached to one another along some length. NMDCO_relaxed.owl ENVO:00000330 biolink:NamedThing stalagmite A speleothem projecting vertically upwards from a cave floor and formed by precipitation from drips. NMDCO_relaxed.owl ENVO:00000331 biolink:NamedThing stalactite A speleothem hanging downwards from a roof or wall, of cylindrical or conical form, usually with a central hollow tube. NMDCO_relaxed.owl ENVO:00002185 biolink:NamedThing oil reservoir A subsurface landform which contains fluid hydrocarbons in porous or fractured rock formations. NMDCO_relaxed.owl ENVO:00000333 biolink:NamedThing subjacent karst Karst developed in soluble beds underlying other rock formations; the surface may or may not be affected by the karst development. NMDCO_relaxed.owl ENVO:00000334 biolink:NamedThing syngenetic karst Karst developed in eolian calcarenite when the development of karst features has taken place at the same time as the lithification of dune sand. NMDCO_relaxed.owl ENVO:00000335 biolink:NamedThing polygonal karst Karst completely pitted by closed depressions so that divides between them form a crudely polygonal network. NMDCO_relaxed.owl ENVO:00000336 biolink:NamedThing doline karst Karst dominated by closed depressions, chiefly dolines, perforating a simple surface. NMDCO_relaxed.owl ENVO:00000422 biolink:NamedThing limestone pavement A natural karst landform consisting of a flat, incised surface of exposed limestone that resembles artificial pavement. NMDCO_relaxed.owl ENVO:00000338 biolink:NamedThing vomit material A bodily fluid material which is composed primarily of vomit, a bodily fluid consisting of the expulsed contents of the stomach of an organism disgorged through the mouth or nose. NMDCO_relaxed.owl ENVO:02000019 biolink:NamedThing bodily fluid material An organic material which is primarily composed of some natural bodily fluid or secretion such as blood, semen, saliva, blood plasma, intracellular and interstitial fluids. NMDCO_relaxed.owl ENVO:02000020 biolink:NamedThing blood material A bodily fluid material which is composed primarily of blood, a bodily fluid composed of blood plasma and blood cells suspended within the plasma that circulates around the organism's body. Blood performs may important functions including the supplying of oxygen and nutrients, removal of waste, circulation of white blood cells, detection of antibodes, coagulation, transportation of antibodies and the regulation of pH and body temperature. NMDCO_relaxed.owl ENVO:02000021 biolink:NamedThing amniotic fluid material A bodily fluid material which is composed primarily of amniotic fluid, a bodily fluid consisting of watery liquid surrounding and cushioning a growing fetus within the amnion. It allows the fetus to move freely without the walls of the uterus being too tight against its body. Buoyancy is also provided. NMDCO_relaxed.owl ENVO:02000022 biolink:NamedThing excreta material A bodily fluid material which is composed primarily of excreta, bodily fluids consisting of matter which contains the waste products of biological processes, including urine or feces, discharged from an organism's body. NMDCO_relaxed.owl ENVO:02000023 biolink:NamedThing bile material A bodily fluid material which is composed primarily of bile, a bodily fluid consisting of a bitter, yellow or green alkaline fluid secreted by hepatocytes from the liver of most vertebrates. In many species, bile is stored in the gallbladder between meals and upon eating is discharged into the duodenum where the bile aids the process of digestion of lipids. NMDCO_relaxed.owl ENVO:02000024 biolink:NamedThing aqueous humour material A bodily fluid material which is composed primarily of aqueous humour, a bodily fluid consisting of a thick watery substance that fills the space between the lens and the cornea. NMDCO_relaxed.owl ENVO:02000026 biolink:NamedThing chyme material A bodily fluid material which is composed primarily of chyme, a bodily fluid consisting of a liquid substance found in the stomach before passing through the pyloric valve and entering the duodenum. It results from the mechanical and chemical breakdown of a bolus and consists of partially digested food, water, hydrochloric acid, and various digestive enzymes. NMDCO_relaxed.owl ENVO:02000027 biolink:NamedThing blood plasma material A bodily fluid material which is composed primarily of blood plasma, a bodily fluid that comprises the liquid component of blood, in which the blood cells are suspended. It makes up about 55% of total blood volume. NMDCO_relaxed.owl ENVO:02000028 biolink:NamedThing ear wax material A bodily fluid material which is composed primarily of ear wax, a bodily fluid consisting of a yellowish, waxy substance secreted in the ear canal of humans and many other mammals. It plays an important role in the human ear canal, assisting in cleaning and lubrication, and also provides some protection from bacteria, fungi, and insects. NMDCO_relaxed.owl ENVO:02000029 biolink:NamedThing cerebrospinal fluid material A bodily fluid material which is composed primarily of cerebrospinal fluid, a clear bodily fluid that occupies the subarachnoid space and the ventricular system around and inside the brain. CSF is a clear bodily fluid that occupies the subarachnoid space and the ventricular system around and inside the brain. NMDCO_relaxed.owl ENVO:02000030 biolink:NamedThing chyle material A bodily fluid material which is composed primarily of chyle, a bodily fluid consisting of a milky fluid consisting of lymph and emulsified fats; formed in the small intestine during digestion of ingested fats. NMDCO_relaxed.owl ENVO:02000031 biolink:NamedThing breast milk material A bodily fluid material which is composed primarily of breast milk, is a bodily fluid produced that is secreted from two milk-secreting glandular organs on a female's chest. NMDCO_relaxed.owl ENVO:02000032 biolink:NamedThing vitreous humor material A bodily fluid material which is composed primarily of vitreous humor, a bodily fluid consisting of a clear gel that fills the space between the lens and the retina of the eyeball of humans and other vertebrates. NMDCO_relaxed.owl ENVO:02000033 biolink:NamedThing pleural effusion material A bodily fluid material which is composed primarily of a pleural effusion, a bodily fluid that is produced in excess and accumulates in the pleural cavity, the fluid-filled space that surrounds the lungs. Excessive amounts of such fluid can impair breathing by limiting the expansion of the lungs during inhalation. NMDCO_relaxed.owl ENVO:02000034 biolink:NamedThing tear material A bodily fluid material which is composed primarily of a volume of tears, a bodily fluid consisting of a drop of the clear salty liquid secreted by glands (lacrimal glands) in the eyes. Tears wet the membrane covering the eye and help rid the eye of irritating substances. NMDCO_relaxed.owl ENVO:02000035 biolink:NamedThing oronasal secretion material A bodily fluid material which is composed primarily of an oronasal secretion, a bodily fluid secreted from the body via the mouth or nose. NMDCO_relaxed.owl ENVO:02000036 biolink:NamedThing saliva material A bodily fluid material which is composed primarily of saliva, a slightly alkaline secretion of water, mucin, protein, salts, and often a starch-splitting enzyme (as ptyalin) that is secreted into the mouth by salivary glands, lubricates ingested food, and often begins the breakdown of starches. NMDCO_relaxed.owl ENVO:02000037 biolink:NamedThing sebum material A bodily fluid material which is composed primarily of sebum, an oily bodily fluid secreted from the sebaceous glads that is made of fat (lipids) and the debris of dead fat-producing cells. In the glands, sebum is produced within specialized cells and is released as these cells burst. Sebum acts to protect and waterproof hair and skin, and keep them from becoming dry, brittle and cracked. It can also inhibit the growth of microorganisms on skin. NMDCO_relaxed.owl ENVO:02000038 biolink:NamedThing pus material A bodily fluid material which is composed primarily of pus, a bodily fluid consisting of a whitish-yellow or yellow substance produced during inflammatory responses of the body that can be found in regions of pyogenic bacterial infections. Pus is produced from the dead and living cells which travel into the intercellular spaces around the affected cells. NMDCO_relaxed.owl ENVO:02000039 biolink:NamedThing synovial fluid material A bodily fluid material which is composed primarily of synovial fluid, a bodily fluid secreted by the synovial membrane into the joint cavity to form a thin layer at the surface of cartilage. NMDCO_relaxed.owl ENVO:02000040 biolink:NamedThing mucus material A bodily fluid material which is composed primarily of mucus, a bodily fluid consisting of a slippery secretion of the lining of the mucous membranes in the body. It is a viscous colloid containing antiseptic enzymes (such as lysozyme) and immunoglobulins. Mucus is produced by goblet cells in the mucous membranes that cover the surfaces of the membranes. It is made up of mucins and inorganic salts suspended in water. NMDCO_relaxed.owl ENVO:02000041 biolink:NamedThing lymph material A bodily fluid material which is composed primarily of lymph, a bodily fluid consisting of a usually clear coagulable fluid that passes from intercellular spaces of body tissue into the lymphatic vessels, is discharged into the blood by way of the thoracic duct and right lymphatic duct, and resembles blood plasma in containing white blood cells and especially lymphocytes but normally few red blood cells and no platelets. NMDCO_relaxed.owl ENVO:02000042 biolink:NamedThing interstitial fluid material A bodily fluid material which is composed primarily of interstitial fluid, a bodily fluid consisting of a solution which bathes and surrounds the cells of multicellular animals. It is the main component of the extracellular fluid, which also includes plasma and transcellular fluid. NMDCO_relaxed.owl ENVO:00000339 biolink:NamedThing piece of rock A mass of solid material which is composed primarily of rock. NMDCO_relaxed.owl ENVO:01001687 biolink:NamedThing mass of solid material An mass of environmental material which is composed primarily of a solid environmental material NMDCO_relaxed.owl ENVO:00002035 biolink:NamedThing meteorite A natural object originating in outer space that survives an impact with a planetary surface without being destroyed. NMDCO_relaxed.owl ENVO:01000776 biolink:NamedThing piece of plastic A mass of solid material which is primarily composed of plastic. NMDCO_relaxed.owl ENVO:01003002 biolink:NamedThing particle A mass of solid material which is either 1) a minute fragment of a larger mass or 2) one of a collection of small masses composing an aggregate. NMDCO_relaxed.owl ENVO:00000340 biolink:NamedThing particle of sand A particle which 1) is composed primarily of and derived from rock or mineral sources and 2) is or was part of a portion of sand. NMDCO_relaxed.owl ENVO:00000343 biolink:NamedThing particle of silt A particle which 1) is primarily composed of quartz or feldspar and 2) is or was part of a portion of silt. NMDCO_relaxed.owl ENVO:01003003 biolink:NamedThing particle of clay A particle which 1) is composed primarily of hydrous aluminium phyllosilicate minerals, in turn composed of aluminium and silicon ions bonded into tiny, thin plates by interconnecting oxygen and hydroxide ions, and 2) is or was part of a portion of clay. NMDCO_relaxed.owl ENVO:03000138 biolink:NamedThing particle of snow A particle which is 1) primarily compposed of water ice, 2) on the order of 1 milimeter or less, 3) has a white and opaque appearance, and 4) is formed as a result of water droplets freezing during precipitation. NMDCO_relaxed.owl ENVO:00000341 biolink:NamedThing piece of gravel A piece of rock which is between two and 64 millimetres in length along its largest dimension. NMDCO_relaxed.owl ENVO:00002139 biolink:NamedThing pebble A piece of rock which is derived from clastic rock and has a grain size of 4 to 64 millimeters. NMDCO_relaxed.owl ENVO:00002140 biolink:NamedThing cobble A piece of rock which has a grain size between 64 and 256 mm. NMDCO_relaxed.owl ENVO:01000243 biolink:NamedThing boulder A piece of rock with a grain size above 300 millimetres in diameter. NMDCO_relaxed.owl ENVO:01000963 biolink:NamedThing diatomite particle A piece of rock which is primarily composed of diatomite: the fossilized, siliceous remains of diatoms mixed with varying amounts of other clays and minerals. NMDCO_relaxed.owl ENVO:01001012 biolink:NamedThing lithometeor A meteor which is primarily composed of rock. NMDCO_relaxed.owl ENVO:00000347 biolink:NamedThing grain of sea sand NMDCO_relaxed.owl ENVO:00000348 biolink:NamedThing grain of rocky sand NMDCO_relaxed.owl ENVO:00000349 biolink:NamedThing terrarium A terrarium is a vivarium which simulates a terrestrial environment. NMDCO_relaxed.owl ENVO:00010622 biolink:NamedThing vivarium A vivarium is an enclosure for keeping and raising organisms for observation or research. Often, a portion of the ecosystem for a particular species is simulated on a smaller scale, with controls for environmental conditions. NMDCO_relaxed.owl ENVO:00002196 biolink:NamedThing aquarium An aquarium is a vivarium which simulates the submerged portions of an aquatic environment NMDCO_relaxed.owl ENVO:01000619 biolink:NamedThing closed ecological system A closed ecological system is a vivarium which does not rely on matter exchange with any part outside the system. NMDCO_relaxed.owl ENVO:01000620 biolink:NamedThing mesocosm A mesocosm is a vivarium that is embedded within a natural environment and is used to place a relatively small part of that environment under experimental control for the purposes of scientific investigation. NMDCO_relaxed.owl ENVO:01000621 biolink:NamedThing microcosm A microcosm is a vivarium within which a simple ecosystem is artificially established and used to simulate and predict the behaviour of natural ecosystems under controlled conditions. NMDCO_relaxed.owl ENVO:00000350 biolink:NamedThing somma volcano A volcanic caldera that has been partially filled by a new central cone. NMDCO_relaxed.owl ENVO:00000370 biolink:NamedThing tuya A distinctive, flat-topped, steep-sided volcano formed when lava erupts through a thick glacier or ice sheet. NMDCO_relaxed.owl ENVO:00000371 biolink:NamedThing complex volcano A volcano with more than one feature. They form because changes of their eruptive characteristics or the location of multiple vents in an area. Stratovolcanoes may form complex volcanoes, because they may overlap another from explosive eruptions, lava flows, pyroclastic flows and by repeated eruptions, to make multiple summits and vents. Stratovolcanoes could also form a large caldera that gets filled in by multiple small cinder cones, lava domes and craters may also develop on the caldera's rim. NMDCO_relaxed.owl ENVO:00000402 biolink:NamedThing mud volcano A volcano created by geologically excreted liquids and gases, although there are several different processes which may cause such activity. Temperatures are much cooler than igneous processes. NMDCO_relaxed.owl ENVO:00000403 biolink:NamedThing shield volcano A large volcano with shallowly-sloping sides. NMDCO_relaxed.owl ENVO:00000404 biolink:NamedThing stratovolcano A tall, conical volcano composed of many layers of hardened lava, tephra, and volcanic ash. These volcanoes are characterized by a steep profile and periodic, explosive eruptions. The lava that flows from them is viscous, and cools and hardens before spreading very far. The source magma of this rock is classified as acidic, or high in silica to intermediate (rhyolite, dacite, or andesite). NMDCO_relaxed.owl ENVO:00000407 biolink:NamedThing subglacial volcano A volcano produced by subglacial eruptions or eruptions beneath the surface of a lake melted into a glacier or ice mass by the rising lava. NMDCO_relaxed.owl ENVO:00000408 biolink:NamedThing volcanic fissure A linear volcanic vent through which lava erupts, usually without any explosive activity. The vent is usually a few meters wide and may be many kilometers long. Fissure vents can cause large flood basalts and hannels. The volcano can usually be seen as a crack in the ground or on the ocean floor. Narrow fissures can be filled in with lava that hardens. NMDCO_relaxed.owl ENVO:01000439 biolink:NamedThing andesitic volcano A volcano which has been formed as a result of the eruption of andesitic lava. NMDCO_relaxed.owl ENVO:01000440 biolink:NamedThing dacitic volcano A volcano which has been formed as a result of the eruption of dacitic lava. NMDCO_relaxed.owl ENVO:00000351 biolink:NamedThing volcanic arc A chain of volcanic islands or mountains formed by plate tectonics as an oceanic tectonic plate subducts under another tectonic plate and produces magma. NMDCO_relaxed.owl ENVO:00000352 biolink:NamedThing continental arc A volcanic arc formed by the subduction of oceanic crust below continental crust. NMDCO_relaxed.owl ENVO:00000353 biolink:NamedThing island arc A volcanic arc formed by the subduction of oceanic crust other oceanic crust on an adjacent tectonic plate. NMDCO_relaxed.owl ENVO:00000354 biolink:NamedThing volcanic field A geothermal field which is prone to localized volcanic activity. NMDCO_relaxed.owl ENVO:01001854 biolink:NamedThing hydrothermal field A geothermally active field within which geothermally heated aqueous fluids are discharged from the the surface of a rocky planet. NMDCO_relaxed.owl ENVO:00000355 biolink:NamedThing monogenetic volcanic field A volcanic field of small, scattered volcanic vents. These volcanic fields, containing numerous monogenetic volcanoes, are noted for having only one short eruptive event. Monogenetic fields occur only where the magma supply to the volcano is low or where vents are not close enough or large enough to develop plumbing systems for continuous feeding of magma. NMDCO_relaxed.owl ENVO:00000462 biolink:NamedThing polygenetic volcanic field A volcanic field of scattered volcanic vents. These volcanic fields, containing numerous polygenetic volcanoes, are noted for having more than one eruptive event from the same vent(s), rather than the more common monogenetic volcanic field. Polygenetic volcanic fields generally occur where there is a high-level magma chamber. These volcanic fields may show lithological discontinuities due to major changes in magma chemistry, volcanotectonic events, or long erosional intervals, and may last >10 million year period. NMDCO_relaxed.owl ENVO:00000356 biolink:NamedThing pyroclastic cone A cone made of material ejected from a volcano. The material can range from finest particles. In comparison, cinder cones are more uniform. They are usually found in or on larger features, such as stratovolcanoes, shield volcanoes and can be found inside calderas, however they can also be an independent feature. They can range from a few metres in height and are usually formed by a single eruption. NMDCO_relaxed.owl ENVO:00000399 biolink:NamedThing ash cone A cone that is composed of particles of silt to sand size. Explosive eruptions from a vent where the magma is interacting with groundwater or the sea (as in an eruption off the coast) produce steam and are called phreatic. The interaction between the magma, expanding steam, and volcanic gases results in the ejection of mostly small particles called ash. Fallen ash has the consistency of flour. The unconsolidated ash forms an ash cone which becomes a tuff cone or tuff ring once the ash consolidates. NMDCO_relaxed.owl ENVO:00000400 biolink:NamedThing cinder cone A cone built almost entirely of loose volcanic fragments called cinders (pumice, pyroclastics, or tephra). They are built from particles and blobs of congealed lava ejected from a single vent. As the gas-charged lava is blown violently into the air, it breaks into small fragments that solidify and fall as cinders around the vent to form a circular or oval cone. Most cinder cones have a bowl-shaped crater at the summit. NMDCO_relaxed.owl ENVO:00000401 biolink:NamedThing spatter cone A volcanic cone formed of molten lava ejected from a vent somewhat like taffy. Expanding gases in the lava fountains tear the liquid rock into irregular gobs that fall back to earth, forming a heap around the vent. The still partly liquid rock splashed down and over the sides of the developing mound is called spatter. Because spatter is not fully solid when it lands, the individual deposits are very irregular in shape and weld together as they cool, and in this way particularly differ from cinder and ash. NMDCO_relaxed.owl ENVO:01000664 biolink:NamedThing tuff cone A cone that is composed of consolidated volcanic ash. NMDCO_relaxed.owl ENVO:00000358 biolink:NamedThing area of protected biodiversity An area of land or of a body of water in which management practices, through legal or other effective means, prioritise the protection and maintenance of biological diversity, and of natural and associated cultural resources. NMDCO_relaxed.owl ENVO:00000375 biolink:NamedThing world heritage site A protected area that is a specific site (such as a forest, mountain, lake, desert, monument, building, complex, or city) that has been nominated and confirmed for inclusion on the list maintained by the international World Heritage Programme administered by the UNESCO World Heritage Committee. NMDCO_relaxed.owl ENVO:00000359 biolink:NamedThing natural monument A natural environment which has been designated by a competent authority as having outstanding or unique value because of its rarity, aesthetic qualities, or cultural significance. NMDCO_relaxed.owl ENVO:01000951 biolink:NamedThing natural environment An environmental system in which minimal to no anthropisation has occurred and non-human agents are the primary determinants of the system's dynamics and composition. NMDCO_relaxed.owl ENVO:00000360 biolink:NamedThing area of national forest A protected forest or woodland area in the United States. National forests are controlled by the federal government and managed by the United States Forest Service, under the direction of the United States Department of Agriculture. NMDCO_relaxed.owl ENVO:00000361 biolink:NamedThing site of special scientific interest A conservation designation denoting a protected area in the United Kingdom. SSSIs are the basic 'building block' of nature conservation legislation and most other legal nature/geological conservation designations are based upon them, including National Nature Reserves, Ramsar Sites, Special Protection Areas, and Special Areas of Conservation. NMDCO_relaxed.owl ENVO:00000362 biolink:NamedThing marine park area A protected area of the sea usually established to preserve a specific habitat and ensure the ecosystem is sustained for the organisms that exist there. Most marine parks are designated by governments, and organized like watery national parks. NMDCO_relaxed.owl ENVO:00000363 biolink:NamedThing area designated as a nature reserve A protected area of importance for wildlife, flora, fauna or features of geological or other special interest, which is reserved and managed for conservation and to provide special opportunities for study or research. Nature reserves may be designated by government institutions in some countries, such as the United Kingdom, or by private landowners, such as charities and research institutions, regardless of nationality. NMDCO_relaxed.owl ENVO:00000366 biolink:NamedThing area designated as a national nature reserve An area of protected biodiversity which is of national significance for biological or Earth science interest. NMDCO_relaxed.owl ENVO:00000374 biolink:NamedThing wildlife management area A protected area with the purpose of protecting and managing wild life. NMDCO_relaxed.owl ENVO:00000376 biolink:NamedThing biosphere reserve An international conservation designation given by UNESCO under its Programme on Man and the Biosphere (MAB). NMDCO_relaxed.owl ENVO:01000778 biolink:NamedThing key biodiversity area An environmental zone which contains, as determined by an officially mandated selection process, one or more ecosystems which include, as parts, ecological communities of global significance for conservation due to their vulnerability and irreplaceability. NMDCO_relaxed.owl ENVO:01001169 biolink:NamedThing area protected according to IUCN guidelines A protected area in which management objectives have been declared, by a local governing body or authority, to adhere to the guidelines set forth by the International Union for the Conservation of Nature (IUCN). NMDCO_relaxed.owl ENVO:00000364 biolink:NamedThing national wildlife refuge A designation for certain protected areas of the United States managed by the United States Fish and Wildlife Service. The National Wildlife Refuge system is a network of lands and waters managed to protect wildlife and wildlife habitat. NMDCO_relaxed.owl ENVO:00000365 biolink:NamedThing Ramsar site A wetland protected by the terms of the Ramsar Convention (The Convention on Wetlands of International Importance, especially as Waterfowl Habitat). NMDCO_relaxed.owl ENVO:00000367 biolink:NamedThing IUCN national park An IUCN protected area which 1) primarily consists of ecosystems which are able to maintain their natural composition, structure, and function at a regional scale and which are deemed to be representative of a region's natural bio- and geodiversity, 2) is sufficiently large to allow its constituent ecosystems to function, develop, and recover from natural perturbations without human intervention, and 3) is managed to preserve natural ecosystem integrity and functioning at a regional scale, while allowing human access for the purposes of conservation, cultural and spiritural activities, research, education, tourism, subsistence use by indigenous communities, and recreation. NMDCO_relaxed.owl ENVO:01001162 biolink:NamedThing IUCN strict nature reserve An IUCN protected area in which human visitation, use and impacts are strictly controlled and limited to ensure protection and conservation of natural biodiversity and/or geodiversity, natural ecosystem assemblages and processes, and any associated cultural and spiritual values. NMDCO_relaxed.owl ENVO:01001163 biolink:NamedThing IUCN wilderness area An IUCN protected area which 1) is dominated by natural ecosystems, 2) is sufficiently large to allow those ecosystems to function and develop without local anthropogenic perturbation, 3) is managed to prevent perturbations by proximate or local anthropisation, including those caused by local and/or indigenous human communities or human visitation. NMDCO_relaxed.owl ENVO:01001165 biolink:NamedThing IUCN natural monument or feature An IUCN protected area which includes a primarily natural formation designated to be of high natural heritage value and the environmental systems which it determines (e.g. the spray zone of a waterfall monument). NMDCO_relaxed.owl ENVO:01001166 biolink:NamedThing IUCN habitat/species management area An IUCN protected area within which the habitats of or ecosystems used by floral and faunal species deemed to be of international, national, or local importance are maintained, conserved, or restored such that their composition and functional integrity are maintained. NMDCO_relaxed.owl ENVO:01001172 biolink:NamedThing IUCN protected landscape/seascape An IUCN protected area which 1) includes entities that have been deemed to be of high scenic quality, 2) is composed of a historically stable assemblage of causally interlinked natural and anthropised ecosystems that provides cultural ecosystem services, and 3) hosts traditional and sustainable human activities. NMDCO_relaxed.owl ENVO:01001225 biolink:NamedThing IUCN protected area with sustainable use of natural resources An IUCN protected area within which 1) natural ecosystems and their resources are either conserved or used through non-industrial human activities, 2) usage activites contribute to conservation goals, ensuring inter-generational security for local communities' livelihoods, and 3) the majority of benefits derived from the use of ecosystems are received by communities living near or in the area. NMDCO_relaxed.owl ENVO:00000372 biolink:NamedThing pyroclastic shield volcano A shield volcano that is formed mostly of pyroclastic and highly explosive eruptions rather than relatively fluid basaltic lava issuing from vents or fissures on the surface of the volcano. They typically display low-angle flank slopes and have little or no central collapse, although a shallow sag in the shield is commonly observed. Lava is commonly extruded after the cessation of explosive activity commonly superposes the vent region. NMDCO_relaxed.owl ENVO:00000378 biolink:NamedThing canal head reservoir A reservoir constructed for the purpose of maintaining water levels in a canal or canals. NMDCO_relaxed.owl ENVO:00000443 biolink:NamedThing flood control reservoir A reservoir constructed for the purpose of containing a flood, an overflow of water from a body of water that sumerges land. NMDCO_relaxed.owl ENVO:00000448 biolink:NamedThing hydroelectric reservoir A reservoir constructed for the purpose of generating electricity. NMDCO_relaxed.owl ENVO:00000449 biolink:NamedThing drinking water reservoir A reservoir constructed for the purpose of providing drinking water. NMDCO_relaxed.owl ENVO:00000450 biolink:NamedThing irrigation reservoir A reservoir constructed for the purpose of providing water for irrigation. NMDCO_relaxed.owl ENVO:00000379 biolink:NamedThing inundation disposition The disposition of an environmental system to be covered by liquid water. NMDCO_relaxed.owl ENVO:01000455 biolink:NamedThing material pooling disposition The disposition of an environmental system to sequester and store some material entity. NMDCO_relaxed.owl ENVO:01001082 biolink:NamedThing climate The disposition of an environmental system, particularly those influencing atmospheres, to manifest a cyclic pattern of weather over time. NMDCO_relaxed.owl ENVO:01001195 biolink:NamedThing radiation shielding disposition An environmental disposition which inheres in an entity that intercepts, attenuates, or blocks radiation. NMDCO_relaxed.owl ENVO:00000382 biolink:NamedThing lake shore That part of the land in immediate contact with a lake. NMDCO_relaxed.owl ENVO:00000485 biolink:NamedThing sea shore That part of the land in immediate contact with a sea, including the intertidal zone. NMDCO_relaxed.owl ENVO:03501239 biolink:NamedThing riverfront A shore along a river. NMDCO_relaxed.owl ENVO:00000384 biolink:NamedThing river bed The channel bottom of a river; the physical confine of the normal water flow. NMDCO_relaxed.owl ENVO:00000507 biolink:NamedThing wadi mouth The lower terminus of a wadi where it widens into an adjoining floodplain, depression, or water body. NMDCO_relaxed.owl ENVO:00000518 biolink:NamedThing ditch mouth The exit or point of discharge of a ditch. NMDCO_relaxed.owl ENVO:01000864 biolink:NamedThing mouth of liquid discharge conduit A site at the terminus of a liquid conveyance conduit where the liquid carried is discharged into the sea or a river. NMDCO_relaxed.owl ENVO:00000387 biolink:NamedThing container of an intermittent lake A depression which intermittently contains a lake. NMDCO_relaxed.owl ENVO:00000504 biolink:NamedThing container of an intermittent pond A container of an intermittent water body which, when filled with water, has a well-illuminated surface layer, is subject to complete mixing of the water it holds, and is smaller than the container of a lake. NMDCO_relaxed.owl ENVO:00000506 biolink:NamedThing intermittently filled reservoir A reservoir that is not permanently filled with water, at times being dry. NMDCO_relaxed.owl ENVO:01000980 biolink:NamedThing channel of an intermittent stream A channel through which a directional flow of water periodically occurs, ceasing when bed seepage or evapotranspiration exceed the available water supply. NMDCO_relaxed.owl ENVO:00000390 biolink:NamedThing mountain spur A spur which is part of a mountain. NMDCO_relaxed.owl ENVO:00000391 biolink:NamedThing land bridge An isthmus or other land connection between what at other times are separate land masses which allows animals and plants to cross and colonise new lands. Land bridges are commonly created by regression, in which sea levels fall exposing previously submerged sections of continental shelf. Land bridges are also formed by: (a) upthrust at the edge of continental plates; and (b) glacial retreat alleviating pressure on shallow marine formations. NMDCO_relaxed.owl ENVO:01000731 biolink:NamedThing igneous extrusion A mass of igneous rock formed when hot magma flows out (extrudes) onto a planetary surface as lava or explodes violently into the atmosphere to fall back as pyroclastics or tuff. NMDCO_relaxed.owl ENVO:00000406 biolink:NamedThing mid-ocean ridge An underwater mountain range, formed by plate tectonics. This uplifting of the ocean floor occurs when convection currents rise in the mantle beneath the oceanic crust and create magma where two tectonic plates meet at a divergent boundary. The mid-ocean ridges of the world are connected and form a single global mid-oceanic ridge system that is part of every ocean. NMDCO_relaxed.owl ENVO:00000550 biolink:NamedThing range of seamounts A mountain range which is submerged under a marine water body. NMDCO_relaxed.owl ENVO:00000416 biolink:NamedThing coastal dune A dune which is part of a coast. NMDCO_relaxed.owl ENVO:00000417 biolink:NamedThing machair A fertile low-lying raised beach found on the some of the coastlines of Ireland and Scotland, in particular in the Outer Hebrides. NMDCO_relaxed.owl ENVO:00000426 biolink:NamedThing ocean floor A marine bed which lies below an ocean. NMDCO_relaxed.owl ENVO:00000482 biolink:NamedThing sea floor A marine bed which lies below a sea. NMDCO_relaxed.owl ENVO:01000059 biolink:NamedThing sea grass bed A bed of a marine, saline water body which is covered by one or more speices of seagrass typically belonging to the families Posidoniaceae, Zosteraceae, Hydrocharitaceae, or Cymodoceaceae. NMDCO_relaxed.owl ENVO:01001376 biolink:NamedThing marine faunal bed A marine bed which is covered by animals which have benthic habitats, including attached, clinging, sessile, infaunal, burrowing, laying, interstitial, and slow-moving animals, but not animals that have created substrate. NMDCO_relaxed.owl ENVO:01001110 biolink:NamedThing ecosystem An environmental system which includes both living and non-living components. NMDCO_relaxed.owl ENVO:01000445 biolink:NamedThing disturbed ecosystem An ecosystem which has been subject to a perturbation, that is, the ecosystem has undergone a pronounced change in response to a change in environmental conditions or other perturbation. NMDCO_relaxed.owl ENVO:01000930 biolink:NamedThing ecological corridor An ecosystem which bridges two or more adjoining ecosystems and through which organisms may move or propagate. NMDCO_relaxed.owl ENVO:01000947 biolink:NamedThing ecotone An envirommental system which bridges two or more biomes and which includes ecological communities which blend these biomes' phylogenetic and phenotypic compositions. NMDCO_relaxed.owl ENVO:01001032 biolink:NamedThing environment determined by a biofilm on a plant surface An environmental system which has its properties and dynamics determined by a biofilm on the surface of a plant. NMDCO_relaxed.owl ENVO:01001034 biolink:NamedThing environment determined by a biofilm on an animal surface An environmental system which has its properties and dynamics determined by a biofilm on the surface of a animal. NMDCO_relaxed.owl ENVO:01001035 biolink:NamedThing environment determined by a biofilm on a fungal surface An environmental system which has its properties and dynamics determined by a biofilm on the surface of a fungus. NMDCO_relaxed.owl ENVO:01001051 biolink:NamedThing environment determined by a biofilm on a non-saline surface An environmental system which has its properties and dynamics determined by a biofilm on a surface which is exposed to non-saline materials. NMDCO_relaxed.owl ENVO:01001055 biolink:NamedThing environment associated with an animal part or small animal An environmental system determined by part of a living or dead animal, or a whole small animal. NMDCO_relaxed.owl ENVO:01001056 biolink:NamedThing environment determined by a biofilm on a saline surface An environmental system which has its properties and dynamics determined by a biofilm on a surface which is exposed to saline materials. NMDCO_relaxed.owl ENVO:01001057 biolink:NamedThing environment associated with a plant part or small plant An environmental system determined by part of a living or dead plant, or a whole small plant. NMDCO_relaxed.owl ENVO:01001058 biolink:NamedThing environment associated with a fungal tissue An environmental system determined by part of a living or dead fungus. NMDCO_relaxed.owl ENVO:01001167 biolink:NamedThing ecosystem fragment An ecosystem which has been causally isolated from a larger ecosystem within which it was previously embedded, such that the direct exchange of materials, resources, and energy between these systems is severely or entirely curtailed. NMDCO_relaxed.owl ENVO:01001176 biolink:NamedThing environment associated with an aquatic invertebrate An environment which has its properties and composition largely determined by the presence of a metazoan which lacks a vetebral column and which has a habitat that is found in an aquatic environmental system. NMDCO_relaxed.owl ENVO:01001364 biolink:NamedThing climate system A system which consists of an atmosphere, hydrosphere, cryosphere, land surface, and biosphere, forced or influenced by external processes. NMDCO_relaxed.owl ENVO:01001404 biolink:NamedThing ecological province An ecosystem which is of larger scale than an ecoregion and which includes smaller ecosystems determined by the presence of ecological assemblages that have at least some cohesion over evolutionary time frames. NMDCO_relaxed.owl ENVO:00000431 biolink:NamedThing drumlin field A cluster of dozens to hundreds of similarly shaped, sized and oriented drumlins. NMDCO_relaxed.owl ENVO:00000433 biolink:NamedThing kame terrace A terrace associated with a kame. NMDCO_relaxed.owl ENVO:00000509 biolink:NamedThing marine terrace A terrace which is located in a marine water body. NMDCO_relaxed.owl ENVO:00000437 biolink:NamedThing Nye channel A small tunnel valley. NMDCO_relaxed.owl ENVO:00000442 biolink:NamedThing maelstrom A very powerful whirlpool. NMDCO_relaxed.owl ENVO:00000445 biolink:NamedThing transvasement An aquaduct to transport water from one river basin to another one, to solve problems of hydrographic imbalance. It can decrease floods, moving the water to lands with droughts. NMDCO_relaxed.owl ENVO:00000446 biolink:NamedThing terrestrial biome A biome which is primarily or completely situated on a landmass. NMDCO_relaxed.owl ENVO:00002030 biolink:NamedThing aquatic biome A biome which is determined by a water body and which has ecological climax communities adapted to life in or on water. NMDCO_relaxed.owl ENVO:01000048 biolink:NamedThing ocean biome A marine biome which is determined by an ocean. NMDCO_relaxed.owl ENVO:01000179 biolink:NamedThing desert biome A desert ecosystem which is undergoing climactic ecological succession. NMDCO_relaxed.owl ENVO:01000246 biolink:NamedThing village biome A village biome is an anthropogenic terrestrial biome which contains settlements such as villages, towns, and/or small cities and which is primarily used for agricultural activity. NMDCO_relaxed.owl ENVO:01000248 biolink:NamedThing dense settlement biome A dense settlement biome is an anthropogenic terrestrial biome which is primarily used for human habitation, recreation, and industry within built structures with little other land use. NMDCO_relaxed.owl ENVO:01000339 biolink:NamedThing polar biome A biome which is subject to polar climatic conditions. NMDCO_relaxed.owl ENVO:01001830 biolink:NamedThing tropical biome A biome which is subject to tropical climatic conditions. NMDCO_relaxed.owl ENVO:01001831 biolink:NamedThing temperate biome A biome which is subject to temperate climatic conditions. NMDCO_relaxed.owl ENVO:01001832 biolink:NamedThing subtropical biome A biome which is subject to subtropical climatic conditions. NMDCO_relaxed.owl ENVO:01001833 biolink:NamedThing mediterranean biome A biome which is subject to mediterranean climatic conditions. NMDCO_relaxed.owl ENVO:01001834 biolink:NamedThing subpolar biome A biome which is subject to subpolar climatic conditions. NMDCO_relaxed.owl ENVO:01001835 biolink:NamedThing alpine biome A biome which is subject to alpine altitudinal conditions. NMDCO_relaxed.owl ENVO:01001836 biolink:NamedThing montane biome A biome which is subject to montane altitudinal conditions. NMDCO_relaxed.owl ENVO:01001837 biolink:NamedThing subalpine biome A biome which is subject to subapline altitudinal conditions. NMDCO_relaxed.owl ENVO:01001838 biolink:NamedThing arid biome A biome which is subject to arid environmental conditions. NMDCO_relaxed.owl ENVO:01001245 biolink:NamedThing woodland ecosystem An ecosystem which is determined by communities of plants with a tree growth form and in which members of those communities are spaced sufficiently far apart to allow sunlight to illuminate the understory. NMDCO_relaxed.owl ENVO:01001370 biolink:NamedThing tundra ecosystem An ecosystem which 1) typically has monthly average temperatures below 10 degrees Celsius 2) has a low evapotranspiration ratio 3) is dominated by treeless terrain, covered by communities of low-growing vegetation such as dwarf shrubs, sedges and grasses, mosses, and lichens, 4) contains areas of soil underlain by permafrost with a thin active layer and 5) occurs in both polar and alpine regions (i.e., both high latitudes and high altitudes), and 5) does not have permanent snow or ice cover. NMDCO_relaxed.owl ENVO:00000447 biolink:NamedThing marine biome An aquatic biome which is determined by a marine water body. NMDCO_relaxed.owl ENVO:00000873 biolink:NamedThing freshwater biome An aquatic biome which is determined by a body of freshwater. NMDCO_relaxed.owl ENVO:01001788 biolink:NamedThing marine ecosystem NMDCO_relaxed.owl ENVO:01001629 biolink:NamedThing polymetallic nodule ecosystem An ecosystem which is determined by the presence of rounded mineral concretions primarily composed of manganese hydroxides on the seafloor. NMDCO_relaxed.owl ENVO:00000454 biolink:NamedThing turlough A container of an intermittent lake unique to the limestone areas of Ireland, mostly west of the River Shannon. Most turloughs flood in the autumn, usually some time in October, and then dry up some time between April and July. NMDCO_relaxed.owl ENVO:00000502 biolink:NamedThing container of an intermittent saline lake A depression that is periodically filled with saline water, forming a saline lake. NMDCO_relaxed.owl ENVO:00000503 biolink:NamedThing container of an intermittent oxbow lake A depression which is continous with one or more abandoned meander loops of a river channel. NMDCO_relaxed.owl ENVO:00000465 biolink:NamedThing natural harbor A harbor which is formed by a natural landform where a part of a body of water is protected and deep enough to furnish anchorage. NMDCO_relaxed.owl ENVO:00000467 biolink:NamedThing university campus An area of land on which a college or university and related institutional buildings are situated. NMDCO_relaxed.owl ENVO:03501130 biolink:NamedThing school building An institutional building in which students are educated. NMDCO_relaxed.owl ENVO:00000468 biolink:NamedThing hydroelectric dam A dam constructed for the purpose of generating electricity from the water stored behind it. NMDCO_relaxed.owl ENVO:00000470 biolink:NamedThing irrigation dam A dam constructed for the purpose of holding water in a reservoir for irrigation. NMDCO_relaxed.owl ENVO:00000471 biolink:NamedThing flood control dam A dam constructed for the purpose of controlling flooding. NMDCO_relaxed.owl ENVO:00000535 biolink:NamedThing weir A low obstruction built across the path of s stream to raise its level. NMDCO_relaxed.owl ENVO:00000553 biolink:NamedThing multipurpose dam A dam constructed for more than one purpose. NMDCO_relaxed.owl ENVO:00000554 biolink:NamedThing saddle dam An auxiliary dam constructed to confine the reservoir created by a primary dam either to permit a higher water elevation and storage or to limit the extent of a reservoir for increased efficiency. NMDCO_relaxed.owl ENVO:00000555 biolink:NamedThing check dam A dam designed to reduce flow velocity and control soil erosion. NMDCO_relaxed.owl ENVO:00000556 biolink:NamedThing wing dam A dam that only partly restricts a waterway, creating a faster channel that resists the accumulation of sediment. NMDCO_relaxed.owl ENVO:00000557 biolink:NamedThing dry dam A dam designed to control flooding. It normally holds back no water and allows the channel to flow freely, except during periods of intense flow that would otherwise cause flooding downstream. NMDCO_relaxed.owl ENVO:00000558 biolink:NamedThing diversionary dam A dam designed to divert all or a portion of the flow of a river from its natural course. NMDCO_relaxed.owl ENVO:03600032 biolink:NamedThing embankment dam A dam which is created by the placement and compaction of a complex semi-plastic mound of various compositions of soil, sand, clay, or rock. NMDCO_relaxed.owl ENVO:00000484 biolink:NamedThing polynya A sea surface layer which is 1) not covered by ice and 2) laterally surrounded by either pack ice or land and pack ice. NMDCO_relaxed.owl ENVO:01001581 biolink:NamedThing sea surface layer A surface layer which is part of an ocean or sea. NMDCO_relaxed.owl ENVO:00000489 biolink:NamedThing palsa A frost heave which is formed as the result of a perennial ice lens forming under soil, pushing a roughly oval portion land surface upwards. NMDCO_relaxed.owl ENVO:01001538 biolink:NamedThing frost-formed hummock A hummock which is primarily composed of soil that has been pushed up by frost action. NMDCO_relaxed.owl ENVO:00000497 biolink:NamedThing rincon An incised meander on a river. NMDCO_relaxed.owl ENVO:00000498 biolink:NamedThing volcanic dike An intrusive igneous body. Its thickness is usually much smaller than its other two dimensions. Thickness can vary from sub-centimeter scale to many meters in thickness and the lateral dimensions can extend over many kilometers. A dike is an intrusion into a cross-cutting fissure, meaning a dike cuts across other pre-existing layers or bodies of rock, this means that a dike is always younger than the rocks that contain it. Dikes are usually high angle to near vertical in orientation, but subsequent tectonic deformation may rotate the sequence of strata through which the dike lies so that the latter becomes horizontal. NMDCO_relaxed.owl ENVO:01000659 biolink:NamedThing igneous intrusion An igneous intrusion is a mass of rock and minerals formed when magma cools, solidifies, and undergoes fractional crystallisation without reaching the surface. NMDCO_relaxed.owl ENVO:01000521 biolink:NamedThing batholith A batholith is an area of mostly continuous plutonic (igneous intrusive) rock that covers an area larger than 100 square kilometers, formed in the planetary crust, and exposed by erosion. On Earth, Batholiths are almost always made mostly of felsic or intermediate rock-types, such as granite, quartz monzonite, or diorite. NMDCO_relaxed.owl ENVO:01000733 biolink:NamedThing stock A stock is a discordant igneous intrusion having a surface exposure of less than 100 square kilometres. Stocks differ from batholiths only in being smaller. NMDCO_relaxed.owl ENVO:01000671 biolink:NamedThing dike A sheet of rock that formed in a fracture in a pre-existing rock body. NMDCO_relaxed.owl ENVO:01000732 biolink:NamedThing clastic dike A dike formed when sediment fills a pre-existing fracture in a mass of rock. NMDCO_relaxed.owl ENVO:00000500 biolink:NamedThing beaver dam An obstruction in a stream constructed by a beaver. NMDCO_relaxed.owl ENVO:00005804 biolink:NamedThing nest of ant A pile of earth, sand, pine needles, or clay or a composite of these and other materials that build up at the entrances of the subterranean dwellings of ant colonies as they are excavated. A colony is built and maintained by legions of worker ants, who carry tiny bits of dirt and pebbles in their mandibles and deposit them near the exit of the colony. They normally deposit the dirt or vegetation at the top of the hill to prevent it from sliding back into the colony, but in some species they actively sculpt the materials into specific shapes, and may create nest chambers within the mound. NMDCO_relaxed.owl ENVO:00005805 biolink:NamedThing nest of bird A bird nest is the spot in which a bird lays and incubates its eggs and raises its young. NMDCO_relaxed.owl ENVO:03600069 biolink:NamedThing nest of alligator An animal habitation which is built by alligators from plants and decomposing vegetation in order to protect their eggs from predators. NMDCO_relaxed.owl ENVO:2000006 biolink:NamedThing nest of termite An animal habitation constructed by termites. Termite workers build and maintain nests which house the colony. These are elaborate structures made using a combination of soil, mud, chewed wood/cellulose, saliva, and faeces. A nest has many functions such as providing a protected living space and water conservation (through controlled condensation). NMDCO_relaxed.owl ENVO:01000909 biolink:NamedThing biocrust A surface layer of a solid environmental material which is formed by the presence and activity of photosynthetic microbial assemblages colonising it. NMDCO_relaxed.owl ENVO:01001181 biolink:NamedThing rhizoplane A surface layer which is composed of the external surface of a root, together with closely adhering soil particles and debris NMDCO_relaxed.owl ENVO:01001271 biolink:NamedThing impermeable surface layer A surface layer through which liquids or gases cannot pass. NMDCO_relaxed.owl ENVO:01001503 biolink:NamedThing glacial surface layer A solid surface layer which is that part of a glacier in contact with a planetary atmosphere, water body, or solid material partially surrounding that glacier. NMDCO_relaxed.owl ENVO:01001542 biolink:NamedThing ice surface layer A surface layer which is composed primarily of ice. NMDCO_relaxed.owl ENVO:00000515 biolink:NamedThing road cut A cut to provide passage for a road. NMDCO_relaxed.owl ENVO:00000521 biolink:NamedThing rockfall An irregular mass of fallen rock at the base of a cliff or steep slope. NMDCO_relaxed.owl ENVO:00000522 biolink:NamedThing canal tunnel A tunnel through which a canal passes. NMDCO_relaxed.owl ENVO:00000532 biolink:NamedThing intermittent saline evaporation pond NMDCO_relaxed.owl ENVO:00000540 biolink:NamedThing brackish lake A lake which is primarily composed of brackish water, having a higher salinity than fresh water but a lower salinity than marine water. NMDCO_relaxed.owl ENVO:00002121 biolink:NamedThing alkaline salt lake A saline lake which has a high pH. NMDCO_relaxed.owl ENVO:01001020 biolink:NamedThing hypersaline lake A lake which is primarily composed of water with a concentration of dissolved salts greater than that of ocean water. NMDCO_relaxed.owl ENVO:00000546 biolink:NamedThing lake sediment Lake sediment is sediment which covers the bottom of a lake. Lake sediments are comprised mainly of clastic material (sediment of clay, silt, and sand sizes), organic debris, chemical precipitates, or combinations of these. NMDCO_relaxed.owl ENVO:00002007 biolink:NamedThing sediment Particulate environmental material which is formed as a result of the transport and deposition of particles by flowing liquid. NMDCO_relaxed.owl ENVO:00002045 biolink:NamedThing anaerobic sediment Sediment characterised by the absence of oxygen. NMDCO_relaxed.owl ENVO:00002114 biolink:NamedThing chemically enriched sediment Sediment which has increased levels of one or more chemical compounds. NMDCO_relaxed.owl ENVO:00002127 biolink:NamedThing stream sediment NMDCO_relaxed.owl ENVO:00002154 biolink:NamedThing radioactive sediment NMDCO_relaxed.owl ENVO:00002179 biolink:NamedThing intertidal sediment NMDCO_relaxed.owl ENVO:01000070 biolink:NamedThing terrigenous sediment Sediment comprised of weathered continental rocks, wind blown dust, volcanic ash or other terrestrial material. NMDCO_relaxed.owl ENVO:01000082 biolink:NamedThing biogenous sediment Biogenous sediment is derived from living organisms, typically planktonic organisms possessing shells, frustules or coccoliths. NMDCO_relaxed.owl ENVO:01000110 biolink:NamedThing hydrogenous sediment Hydrogenous sediment is derived from solutes that precipitate out of sea water by a variety of chemical reactions. These are typically less abundant than other sediment types. NMDCO_relaxed.owl ENVO:01000111 biolink:NamedThing cosmogenous sediment Cosmogenous sediment is derived from extraterrestrial dust and debris in the form of meteorites and similar entities. NMDCO_relaxed.owl ENVO:01000113 biolink:NamedThing suspended sediment Suspended sediment, or suspended load, is the term for the particles settle slowly enough to be carried in flowing water (such as a stream or coastal area) either without touching the bed or while only intermittently touching it. These particles are generally of the fine sand, silt and clay size, although larger particles may be carried as well depending on the intensity of the flow. NMDCO_relaxed.owl ENVO:01000114 biolink:NamedThing boulder sediment Sediment characterised by an average particle diameter greater than 256 mm. NMDCO_relaxed.owl ENVO:01000115 biolink:NamedThing cobble sediment Sediment characterised by an average particle diameter between 64 and 256 mm. NMDCO_relaxed.owl ENVO:01000116 biolink:NamedThing pebble sediment Sediment characterised by an average particle diameter between 4 and 32 mm. NMDCO_relaxed.owl ENVO:01000117 biolink:NamedThing granular sediment Sediment characterised by an average particle diameter between 2 and 4 mm. NMDCO_relaxed.owl ENVO:01000118 biolink:NamedThing sandy sediment Sediment characterised by an average particle diameter between 62.5 micrometers and 2 mm. NMDCO_relaxed.owl ENVO:01000119 biolink:NamedThing silty sediment Sediment characterised by an average particle diameter between 3.9 and 62.5 micrometers. NMDCO_relaxed.owl ENVO:01000120 biolink:NamedThing clay sediment Sediment characterised by an average particle diameter between 1 and 3.9 micrometers. NMDCO_relaxed.owl ENVO:01000121 biolink:NamedThing colloidal sediment Sediment characterised by an average particle diameter below 1 micrometer. NMDCO_relaxed.owl ENVO:01000131 biolink:NamedThing mesophilic sediment Sediment characterised by a temperature of 15-45 degrees Celsius and high-to-low oxygenation. Often impacted by hydrothermal fluid flows. NMDCO_relaxed.owl ENVO:01000132 biolink:NamedThing thermophilic sediment Sediment characterised by a temperature of 45-75 degrees Celsius and low to no oxygen content. Often impacted by hydrothermal fluid flows. NMDCO_relaxed.owl ENVO:01000133 biolink:NamedThing hyperthermophilic sediment Sediment characterised by a temperature of 80-125 degrees Celsius and no oxygen content. Often impacted by hydrothermal fluid flows. NMDCO_relaxed.owl ENVO:01001028 biolink:NamedThing sediment permeated by freshwater Sediment which has its porespace filled by water which has very low levels of sodium chloride and/or other salts. NMDCO_relaxed.owl ENVO:01001036 biolink:NamedThing sediment permeated by saline water Sediment which has its porespace filled by water with increased levels of sodium chloride and other salts. NMDCO_relaxed.owl ENVO:01001203 biolink:NamedThing alluvial sediment Sediment which has been transported by flowing water and redeposited in a non-marine setting. NMDCO_relaxed.owl ENVO:01001821 biolink:NamedThing hydrothermally-influenced sediment Sediment through which hydrothermally modified fluids flow, altering its properties through interaction with their own. NMDCO_relaxed.owl ENVO:03000033 biolink:NamedThing marine sediment Sediment which has been transported through the marine water column, settling on the seafloor. NMDCO_relaxed.owl ENVO:03600001 biolink:NamedThing chemically contaminated sediment Sediment which contains some chemical contaminant. NMDCO_relaxed.owl ENVO:00000551 biolink:NamedThing endorheic basin A drainage basin from which there is no outflow of water, either on the surface as rivers, or underground by flow or diffusion through rock or permeable material. NMDCO_relaxed.owl ENVO:00000560 biolink:NamedThing nuclear weapons test site A weapons test site at which nuclear weapons are, or have been, tested. NMDCO_relaxed.owl ENVO:00000566 biolink:NamedThing winter sports facility A sports facility constructed for skiing and allied sports that require snow and/or ice. NMDCO_relaxed.owl ENVO:03500003 biolink:NamedThing public sports field A sports facility which has been constructed for sports that require large outdoor spaces and is owned by a governmental or state entity and which is accessible by its citizenry (i.e. the public). NMDCO_relaxed.owl ENVO:03501281 biolink:NamedThing bowling alley A sports facility where bowling is played. NMDCO_relaxed.owl ENVO:00000856 biolink:NamedThing city Incorporated populated place. NMDCO_relaxed.owl ENVO:01000658 biolink:NamedThing dense settlement A settlement with a high density of buildings and inhabitants. NMDCO_relaxed.owl ENVO:01000653 biolink:NamedThing slum A slum is a heavily populated urban informal settlement with substandard housing in which households lack any one of the following: access to improved water, access to improved sanitation, sufficient-living area, durability of housing, or security of tenure. NMDCO_relaxed.owl ENVO:01001789 biolink:NamedThing freshwater ecosystem NMDCO_relaxed.owl ENVO:03605009 biolink:NamedThing freshwater stream ecosystem An ecosystem in which the composition, structure, and function of resident ecological assemblages are primarily determined by a freshwater stream. NMDCO_relaxed.owl ENVO:00000887 biolink:NamedThing large river biome A freshwater river biome which is determined by a large river. NMDCO_relaxed.owl ENVO:01000253 biolink:NamedThing freshwater river biome A freshwater biome which is determined by a freshwater river. NMDCO_relaxed.owl ENVO:00000888 biolink:NamedThing large river headwater biome A freshwater river biome which is determined by the headwaters of a large river. NMDCO_relaxed.owl ENVO:00000889 biolink:NamedThing large river delta biome A freshwater river biome which is determined by the delta of a large river. NMDCO_relaxed.owl ENVO:00000890 biolink:NamedThing small river biome A freshwater river biome which is determined by a small river. NMDCO_relaxed.owl ENVO:00000891 biolink:NamedThing large freshwater lake biome A freshwater biome which is determined by a large lake. NMDCO_relaxed.owl ENVO:01000252 biolink:NamedThing freshwater lake biome A biome which is determined by a freshwater lake. NMDCO_relaxed.owl ENVO:00000892 biolink:NamedThing small freshwater lake biome A freshwater lake biome which is determined by a small lake. NMDCO_relaxed.owl ENVO:00000893 biolink:NamedThing xeric basin biome A biome which has little permanent surface water and a low relative abundance of springs. NMDCO_relaxed.owl ENVO:03605008 biolink:NamedThing freshwater stream biome A freshwater stream ecosystem which is undergoing climactic ecological succession. NMDCO_relaxed.owl ENVO:00001997 biolink:NamedThing acid mine drainage A mine drainage with an acidic pH. NMDCO_relaxed.owl ENVO:00002112 biolink:NamedThing gold mine drainage Mine drainage which is formed as a result of the mining of gold. NMDCO_relaxed.owl ENVO:00002001 biolink:NamedThing waste water Water that has been adversely affected in quality by anthropogenic influence. NMDCO_relaxed.owl ENVO:00002186 biolink:NamedThing contaminated water NMDCO_relaxed.owl ENVO:00002267 biolink:NamedThing industrial waste material Industrial wastes are liquid, solid and gaseous wastes originating from the manufacture of specific products. NMDCO_relaxed.owl ENVO:00002872 biolink:NamedThing bagasse The biomass remaining after sugarcane stalks are crushed to extract their juice. NMDCO_relaxed.owl ENVO:01000371 biolink:NamedThing agricultural waste material Agricultural waste is waste produced as a result of various agricultural operations. It includes manure and other wastes from farms, poultry houses and slaughterhouses; harvest waste; fertilizer run- off from fields; pesticides that enter into water, air or soils; and salt and silt drained from fields. NMDCO_relaxed.owl ENVO:01000372 biolink:NamedThing household waste material Household waste refers to waste material usually generated in the residential environment. Waste with similar characteristics may be generated in other economic activities and can thus be treated and disposed of together with household waste. NMDCO_relaxed.owl ENVO:01000373 biolink:NamedThing biological waste material Biological waste is waste containing mostly natural organic materials (remains of plants, animal excrement, biological sludge from waste-water treatment plants and so forth). NMDCO_relaxed.owl ENVO:03510070 biolink:NamedThing toxic waste Waste which contains toxic components (e.g., heavy metals or radiation) which can cause harm to organisms and/or the environment. NMDCO_relaxed.owl ENVO:03600006 biolink:NamedThing food waste A waste material which is primarily composed of uneaten food and removed from the food supply chain. NMDCO_relaxed.owl ENVO:00002003 biolink:NamedThing fecal material An excreta material which is composed primarily of feces, an excreta consisting of waste products expelled from an animal's digestive tract through the anus (or cloaca) during defecation. NMDCO_relaxed.owl ENVO:00002047 biolink:NamedThing urine material An excreta material which is composed primarily of urine, a liquid excreta containing water and waste products made by the kidneys, stored in the bladder, and leaves the body through the urethra. NMDCO_relaxed.owl ENVO:02000025 biolink:NamedThing sweat material An excreta material which is composed primarily of sweat, an excreta consisting primarily of water as well as a smaller amount of sodium chloride that is excreted by the sweat glands in the skin of mammals. NMDCO_relaxed.owl ENVO:00002005 biolink:NamedThing air The mixture of gases (roughly (by molar content/volume: 78% nitrogen, 20.95% oxygen, 0.93% argon, 0.038% carbon dioxide, trace amounts of other gases, and a variable amount (average around 1%) of water vapor) that surrounds the planet Earth. NMDCO_relaxed.owl ENVO:01000266 biolink:NamedThing water vapour Water vapour is a vapour which is the gas phase of water. NMDCO_relaxed.owl ENVO:01000451 biolink:NamedThing atmospheric carbon dioxide Atmospheric carbon dioxide is an environmental material composed of carbon dioxide in its gaseous form present in an atmosphere. NMDCO_relaxed.owl ENVO:01000537 biolink:NamedThing atmospheric ozone Atmospheric ozone is an environmental material primarily composed of ozone in its gaseous form and present in an atmosphere. NMDCO_relaxed.owl ENVO:01000554 biolink:NamedThing hydrocarbon gas A gas that is primarily composed of hydrocarbon molecules. NMDCO_relaxed.owl ENVO:01000789 biolink:NamedThing flame A portion of gas which is emitted by a fire or other exothermic reaction, is of increased temperature, and typically emits light in the visible range. NMDCO_relaxed.owl ENVO:02000112 biolink:NamedThing fume A gas, smoke, or vapor that smells strongly or is dangerous to inhale. NMDCO_relaxed.owl ENVO:03510008 biolink:NamedThing diesel exhaust A gas which results from the incomplete or complete combustion of diesel fuel. NMDCO_relaxed.owl ENVO:03510009 biolink:NamedThing gasoline exhaust A gas which results from the complete or incomplete combustion of gasoline fuel. NMDCO_relaxed.owl ENVO:00002006 biolink:NamedThing liquid water An environmental material primarily composed of dihydrogen oxide in its liquid form. NMDCO_relaxed.owl ENVO:00002985 biolink:NamedThing oil A nonpolar, hydrophobic, and lipophilic material which is a viscous liquid at ambient temperatures (about 20 degrees Celsius) or slightly warmer. NMDCO_relaxed.owl ENVO:01000558 biolink:NamedThing liquefied hydrocarbon gas NMDCO_relaxed.owl ENVO:03510065 biolink:NamedThing colorant fluid A liquid environmental material which 1) contains at least one substance which can act as a chemical colorant. NMDCO_relaxed.owl ENVO:00002982 biolink:NamedThing clay Particulate environmental material which 1) is composed primarily of clay particles, with only minor proportions of other materials, 2) demonstrates plasticity when wet, and 3) is capable of hardening when dried or fired. NMDCO_relaxed.owl ENVO:01000016 biolink:NamedThing silt Particulate environmental material which is primarily composed of silt particles. NMDCO_relaxed.owl ENVO:01000017 biolink:NamedThing sand Particulate environmental material which is composed primarily of particles of sand with only minor proportions of other substances. NMDCO_relaxed.owl ENVO:01000436 biolink:NamedThing waterborne particulate matter Particulate environmental material in which small portions of solid material are surrounded by water. NMDCO_relaxed.owl ENVO:01001563 biolink:NamedThing quicksand Particulate environmental material which 1) is primarily composed of a fine, granular material such as sand, silt, or clay suspended in and saturated by water and 2) readily liquefies when weight is applied, losing strength and permitting objects to sink until their weight and buoyancy offset the weight of the displaced quicksand. NMDCO_relaxed.owl ENVO:03000021 biolink:NamedThing soot Particulate environmental material which is composed primarily of carbon particles formed through the incomplete combustion of hydrocarbons. NMDCO_relaxed.owl ENVO:03000038 biolink:NamedThing cryoconite deposit Particulate environmental material which is composed primarily of dust, rock, and soot, as well as the microbial communities associated with these materials, deposited on an ice mass by an aeolian process. NMDCO_relaxed.owl ENVO:04000012 biolink:NamedThing particulate organic matter Particulate environmental material which is composed primarily of organic material. NMDCO_relaxed.owl ENVO:00002010 biolink:NamedThing saline water Water which contains a significant concentration of dissolved salts. NMDCO_relaxed.owl ENVO:00002011 biolink:NamedThing fresh water Water which has a low concentration of dissolved solutes, particularly that of sodium chloride. NMDCO_relaxed.owl ENVO:00002042 biolink:NamedThing surface water Water that is found on the surface of an astronomical object. NMDCO_relaxed.owl ENVO:00002141 biolink:NamedThing leachate The liquid produced when water percolates through any permeable material. It can contain either dissolved or suspended material, or usually both. NMDCO_relaxed.owl ENVO:00002159 biolink:NamedThing drilling bore water NMDCO_relaxed.owl ENVO:00002194 biolink:NamedThing oil field production water NMDCO_relaxed.owl ENVO:00002223 biolink:NamedThing oligotrophic water Water which has very low concentrations of nutrients. NMDCO_relaxed.owl ENVO:00002224 biolink:NamedThing eutrophic water Water with a high nutrient level. NMDCO_relaxed.owl ENVO:00002225 biolink:NamedThing mesotrophic water Water with a nutrient level intermediate between eutrophic and oligotrophic. NMDCO_relaxed.owl ENVO:00003065 biolink:NamedThing distilled water NMDCO_relaxed.owl ENVO:00003097 biolink:NamedThing bore hole water NMDCO_relaxed.owl ENVO:00005791 biolink:NamedThing sterile water Sterile water is water which does not contain lliving organisms. NMDCO_relaxed.owl ENVO:00005792 biolink:NamedThing underground water Water which has physicochemical properties determined by processes which occur beneath the planetary crust. NMDCO_relaxed.owl ENVO:00005793 biolink:NamedThing muddy water NMDCO_relaxed.owl ENVO:01000173 biolink:NamedThing anoxic water Water which lacks dissolved oxygen. NMDCO_relaxed.owl ENVO:01000357 biolink:NamedThing alkaline water A portion of alkaline water is a portion of water with a pH greater than 7. NMDCO_relaxed.owl ENVO:01000358 biolink:NamedThing acidic water A portion of acidic water is a portion of water with a pH less than 7. NMDCO_relaxed.owl ENVO:01000722 biolink:NamedThing meltwater Meltwater is the water released by the melting of snow or ice, including glacial ice, tabular icebergs and ice shelves over oceans. NMDCO_relaxed.owl ENVO:01000872 biolink:NamedThing ballast water Ballast water is water contained in the ballast tanks of sea-going vessels. NMDCO_relaxed.owl ENVO:01000940 biolink:NamedThing fissure water Water which is partially contained within a fissure or a geological fracture. NMDCO_relaxed.owl ENVO:01001063 biolink:NamedThing oxic water Water which has an appreciable concentration of dissolved oxygen. NMDCO_relaxed.owl ENVO:01001064 biolink:NamedThing hypoxic water Water which has low levels of dissolved oxygen. NMDCO_relaxed.owl ENVO:01001267 biolink:NamedThing stormwater Water which accumulates on a solid surface during precipitation events and snow/ice melt. NMDCO_relaxed.owl ENVO:03501370 biolink:NamedThing stagnant water A liquid water which has no current or flow and is susceptible to contamination by pathogens or pathogenic vectors. NMDCO_relaxed.owl ENVO:03600002 biolink:NamedThing cooling water Liquid water which is a participant in a water cooling process. NMDCO_relaxed.owl ENVO:03600009 biolink:NamedThing interstitial water Liquid water which occurs naturally within the pores of rocks and sediments. NMDCO_relaxed.owl ENVO:03600042 biolink:NamedThing marine lake water Liquid water which is either part of or was removed from a marine lake. NMDCO_relaxed.owl ENVO:03600065 biolink:NamedThing spring water Water which comes from a spring. NMDCO_relaxed.owl ENVO:06105211 biolink:NamedThing runoff Liquid water which 1) flows over land and 2) is not absorbed or retained by the materials if flows over or through. NMDCO_relaxed.owl ENVO:06105238 biolink:NamedThing residual water in soil Liquid water which is present in soils as discontinuous volumnes of water in contact with solid and gaseous components of the soil. NMDCO_relaxed.owl ENVO:06105268 biolink:NamedThing treated wastewater Waste water which was converted into an effluent that can be either returned to the water cycle with minimal environmental issues or reused. NMDCO_relaxed.owl ENVO:06105269 biolink:NamedThing desalinated water Saline water from which minerals have been removed to produce fresh water suitable for human consumption or irrigation. NMDCO_relaxed.owl ENVO:00002012 biolink:NamedThing hypersaline water Water which contains a highly increased concentration of dissolved salts, surpassing the average salinity of seawater. NMDCO_relaxed.owl ENVO:00002019 biolink:NamedThing brackish water Water which has a higher salinity than fresh water but a lower salinity than marine water. NMDCO_relaxed.owl ENVO:00002149 biolink:NamedThing sea water Water which has physicochemical properties that have been determined by the processes occuring in a sea or ocean. NMDCO_relaxed.owl ENVO:01001037 biolink:NamedThing slightly saline water Water which contains a slightly increased concentration of dissolved salts, relative to their concentration in freshwater. NMDCO_relaxed.owl ENVO:01001038 biolink:NamedThing moderately saline water Water which contains a moderately increased concentration of dissolved salts, relative to their concentration in freshwater. NMDCO_relaxed.owl ENVO:01001039 biolink:NamedThing highly saline water Water which contains a highly increased concentration of dissolved salts, relative to their concentration in freshwater. NMDCO_relaxed.owl ENVO:00002013 biolink:NamedThing igneous rock Rock formed from molten magma. NMDCO_relaxed.owl ENVO:00002015 biolink:NamedThing volcanic rock An igneous rock that results from magma reaching the surface either as lava or fragmental ejecta. NMDCO_relaxed.owl ENVO:00002016 biolink:NamedThing sedimentary rock A rock formed by deposition of either clastic sediments, organic matter, or chemical precipitates (evaporites), followed by compaction of the particulate matter and cementation during diagenesis. NMDCO_relaxed.owl ENVO:00002017 biolink:NamedThing metamorphic rock A rock formed by subjecting any rock type (including previously-formed metamorphic rock) to different temperature and pressure conditions than those in which the original rock was formed. These temperatures and pressures are always higher than those at the Earth's surface and must be sufficiently high so as to change the original minerals into other mineral types or else into other forms of the same minerals (e.g. by recrystallisation). NMDCO_relaxed.owl ENVO:01000661 biolink:NamedThing tuff Tuff is a type of rock made of volcanic ash ejected from a vent during a volcanic eruption. NMDCO_relaxed.owl ENVO:01000662 biolink:NamedThing scoria Scoria is a highly vesicular, dark colored volcanic rock that may or may not contain crystals. NMDCO_relaxed.owl ENVO:01000663 biolink:NamedThing pumice Pumice is a volcanic rock that consists of highly vesicular rough textured volcanic glass, which may or may not contain crystals. NMDCO_relaxed.owl ENVO:01000751 biolink:NamedThing bedrock A lithified mass of rock that lies under the loose softer material (regolith) at the surface of the Earth or other terrestrial planet. NMDCO_relaxed.owl ENVO:01001204 biolink:NamedThing alluvial deposit A rock which is formed as a result of the lithification of alluvium. NMDCO_relaxed.owl ENVO:02000094 biolink:NamedThing ore a type of rock that contains sufficient minerals with important elements including metals that can be economically extracted from the rock. NMDCO_relaxed.owl ENVO:03600016 biolink:NamedThing saprolite Rock which is derived from bedrock through chemical weathering NMDCO_relaxed.owl ENVO:00002014 biolink:NamedThing plutonic rock An igneous rock that results from the crystallization of a magma below the surface of the Earth. NMDCO_relaxed.owl ENVO:01000236 biolink:NamedThing basalt Basalt is a volcanic rock which is formed by the rapid cooling of basaltic lava. NMDCO_relaxed.owl ENVO:01000356 biolink:NamedThing granite A portion of granite is a portion of igneous rock which is intrusive, felsic, granular, and phaneritic. NMDCO_relaxed.owl ENVO:01000441 biolink:NamedThing andesite Andesite is an extrusive igneous, volcanic rock, of intermediate composition, with aphanitic to porphyritic texture. NMDCO_relaxed.owl ENVO:01000442 biolink:NamedThing dacite Dacite is an igneous, volcanic rock. It has an aphanitic to porphyritic texture and is intermediate in composition between andesite and rhyolite. Dacite consists mostly of plagioclase feldspar with biotite, hornblende, and pyroxene (augite and/or enstatite). It has quartz as rounded, corroded phenocrysts, or as an element of the ground-mass. The plagioclase ranges from oligoclase to andesine and labradorite. Sanidine occurs, although in small proportions, in some dacites, and when abundant gives rise to rocks that form transitions to the rhyolites. NMDCO_relaxed.owl ENVO:00002018 biolink:NamedThing sewage Wastewater that is contaminated with feces or urine, NMDCO_relaxed.owl ENVO:00002193 biolink:NamedThing pulp-bleaching waste water NMDCO_relaxed.owl ENVO:01000964 biolink:NamedThing industrial wastewater Wastewater which is produced by industrial activity and which contains chemical contaminants other than those associated with urine and fecal matter. NMDCO_relaxed.owl ENVO:00002033 biolink:NamedThing carcass The dead body of an animal. NMDCO_relaxed.owl ENVO:01001814 biolink:NamedThing organic object An object which is formed as a result of one or more biological processes and is composed primarily of organic material. NMDCO_relaxed.owl ENVO:01000007 biolink:NamedThing organic object formed through microbial activity An organic object which is formed as a result of the biological processes mediated by microbial assemblages. NMDCO_relaxed.owl ENVO:01000162 biolink:NamedThing organ A collection of tissues joined in structural unit to serve a common function. NMDCO_relaxed.owl ENVO:00002034 biolink:NamedThing biofilm A complex aggregation of microorganisms marked by the excretion of a protective and adhesive matrix; usually adhering to a substratum. NMDCO_relaxed.owl ENVO:01000008 biolink:NamedThing microbial mat A multi-layered sheet of micro-organisms, mainly bacteria and archaea. Microbial mats grow at interfaces between different types of material, mostly on submerged or moist surfaces but a few survive in deserts. NMDCO_relaxed.owl ENVO:01000137 biolink:NamedThing organic matter fall An accumulation of organic matter that has fallen to the bottom of a body of water. NMDCO_relaxed.owl ENVO:01000063 biolink:NamedThing planktonic material A portion of planktonic material is a portion of environmental material primarily composed of plankton. NMDCO_relaxed.owl ENVO:01000156 biolink:NamedThing biofilm material Material derived from a biofilm, an aggregate of microorganisms in which cells adhere to each other and/or to a surface. These adherent cells are frequently embedded within a self-produced matrix of extracellular polymeric substance (EPS). Biofilm EPS, which is also referred to as slime, is a polymeric conglomeration generally composed of extracellular DNA, proteins, and polysaccharides in various configurations. NMDCO_relaxed.owl ENVO:01000157 biolink:NamedThing microbial mat material Material derived from a microbial mat, a multi-layered sheet of micro-organisms, mainly bacteria and archaea. Microbial mats create a wide range of internal chemical environments. NMDCO_relaxed.owl ENVO:01000349 biolink:NamedThing root matter An organic material primarily composed of a portion of plant root. NMDCO_relaxed.owl ENVO:01000628 biolink:NamedThing plant litter Leaf litter is dead plant material, such as leaves, bark, needles, and twigs, that has fallen to the ground. NMDCO_relaxed.owl ENVO:01001103 biolink:NamedThing detritus An organic material which is primarily composed of dead particulate matter. NMDCO_relaxed.owl ENVO:01001189 biolink:NamedThing algal material NMDCO_relaxed.owl ENVO:01001391 biolink:NamedThing gill tissue material NMDCO_relaxed.owl ENVO:01001395 biolink:NamedThing necromass Biomass which is composed primarily of dead organisms, their parts, or their organic derivatives. NMDCO_relaxed.owl ENVO:01001820 biolink:NamedThing cultured organic material NMDCO_relaxed.owl ENVO:02000008 biolink:NamedThing cell culture A cell culture is a growth of cells in vitro in an artificial medium for experimental research. NMDCO_relaxed.owl ENVO:03501304 biolink:NamedThing cellophane A thin, transparent sheet made of regenerated cellulose. NMDCO_relaxed.owl ENVO:03600084 biolink:NamedThing lichen material An organic material which is derived from lichen mats. NMDCO_relaxed.owl ENVO:1000746 biolink:NamedThing marine mucilage A gelatinous material primarily composed of exopolymeric compounds with colloidal properties, formed through the aggregation of marine snow particles, often found in large sheets, flocs, and clouds. NMDCO_relaxed.owl ENVO:00002043 biolink:NamedThing wastewater treatment plant NMDCO_relaxed.owl ENVO:00002272 biolink:NamedThing waste treatment plant NMDCO_relaxed.owl ENVO:00003043 biolink:NamedThing sewage plant A waste treatment plant which equipped to treat sewage such that its potential for environmental contamination is reduced. NMDCO_relaxed.owl ENVO:00002046 biolink:NamedThing activated sludge NMDCO_relaxed.owl ENVO:00002057 biolink:NamedThing raw primary sludge NMDCO_relaxed.owl ENVO:00002058 biolink:NamedThing secondary sludge NMDCO_relaxed.owl ENVO:00002059 biolink:NamedThing biosolids A treated form of sludge, sometimes used as a fertilizer in agriculture. NMDCO_relaxed.owl ENVO:00002129 biolink:NamedThing anaerobic sludge NMDCO_relaxed.owl ENVO:00002176 biolink:NamedThing contaminated sludge NMDCO_relaxed.owl ENVO:00002177 biolink:NamedThing 1,4-dioxane contaminated sludge NMDCO_relaxed.owl ENVO:00002212 biolink:NamedThing thermophilic granular sludge NMDCO_relaxed.owl ENVO:00005796 biolink:NamedThing marine sludge NMDCO_relaxed.owl ENVO:00002048 biolink:NamedThing chondrite A stony meteorite that have not been modified due to melting or differentiation of the parent body. NMDCO_relaxed.owl ENVO:00002049 biolink:NamedThing stony meteorite NMDCO_relaxed.owl ENVO:00002050 biolink:NamedThing achondrite A stony meteorite that is made of material similar to terrestrial basalts or plutonic rocks. NMDCO_relaxed.owl ENVO:00002051 biolink:NamedThing stony-iron meteorite A meteorite that consists of a mixture of iron-nickel metal and silicate minerals. NMDCO_relaxed.owl ENVO:00002052 biolink:NamedThing iron meteorite A meteorite that overwhelmingly of nickel-iron alloys. NMDCO_relaxed.owl ENVO:00002053 biolink:NamedThing limestone A sedimentary rock which is composed primarily of calcium carbonate in the form of calcite or aragnoite. NMDCO_relaxed.owl ENVO:00010623 biolink:NamedThing dolomite A sedimentary carbonate rock and a mineral, both composed of calcium magnesium carbonate CaMg(CO3)2 found in crystals. NMDCO_relaxed.owl ENVO:01000271 biolink:NamedThing clastic sedimentary rock Clastic sedimentary rocks are sedimentary rocks that are composed of silicate minerals and rock fragments that were transported by moving fluids. Clastic rocks are composed largely of quartz, feldspar, rock (lithic) fragments, clay minerals, and mica; numerous other minerals may be present as accessories and may be important locally. NMDCO_relaxed.owl ENVO:01000962 biolink:NamedThing diatomite A sedimentary rock which is primarily composed of the fossilized, siliceous remains of diatoms mixed with varying amounts of other clays and minerals. NMDCO_relaxed.owl ENVO:02000091 biolink:NamedThing coal A combustible black or brownish-black sedimentary rock usually occurring in rock strata in layers or veins called coal beds or coal seams. NMDCO_relaxed.owl ENVO:03600064 biolink:NamedThing microbialite A sedimentary rock which is made of carbonate mud whose formation is mediated by microbes in the benthic zone. NMDCO_relaxed.owl ENVO:00002054 biolink:NamedThing chalk Limestone which is soft, white, and porous. NMDCO_relaxed.owl ENVO:00003982 biolink:NamedThing travertine Limestone which is deposited from the water of mineral springs or streams saturated with calcium carbonate. NMDCO_relaxed.owl ENVO:01000273 biolink:NamedThing lime mudstone Lime mudstone is a limestone which is primarily composed of either clay-size or both silt-size and clay-size detrital (transported) carbonate grains. NMDCO_relaxed.owl ENVO:00002055 biolink:NamedThing sandstone A sedimentary rock composed mainly of sand-size mineral or rock grains. NMDCO_relaxed.owl ENVO:00002056 biolink:NamedThing shale A fine-grained sedimentary rock whose original constituents were clays or muds. It is characterized by thin laminae breaking with an irregular curving fracture, often splintery and usually parallel to the often-indistinguishable bedding plane. NMDCO_relaxed.owl ENVO:01000269 biolink:NamedThing siltstone A sedimentary rock which is composed mainly of silt. This rock has a grainsize in the silt range, finer than sandstone and coarser than claystones. NMDCO_relaxed.owl ENVO:01000270 biolink:NamedThing claystone A clastic sedimentary rock which is composed primarily of clay sized particles. NMDCO_relaxed.owl ENVO:01000272 biolink:NamedThing mudstone A mudstone is a clastic sedimentary rock which contains a mixture of at least one third of silt- and one third of clay-sized particles. NMDCO_relaxed.owl ENVO:00002060 biolink:NamedThing oil sludge A solid or gel in motor oil caused by the oil gelling or solidifying, usually at temperatures lower than 100deg C. NMDCO_relaxed.owl ENVO:00002061 biolink:NamedThing oil spill The result of the unintentional release of liquid petroleum hydrocarbon into the environment as a result of human activity. NMDCO_relaxed.owl ENVO:00002113 biolink:NamedThing deep marine sediment Sediment that accumulates in the flat or very gently sloping areas of the deep ocean basin floor. The three main types of deep marine sediment, also known as pelagic sediment, are siliceous oozes, calcareous oozes, and red clays. NMDCO_relaxed.owl ENVO:03000034 biolink:NamedThing shallow marine sediment Marine sediment soured from either terrestrial systems, marine organisms, seawater and or cosmogeneous sources, which is transported through the marine water column, and accumulates within shallow regions of the oceanic basin close to continents, such as the continental shelf, or continental slope. NMDCO_relaxed.owl ENVO:00002115 biolink:NamedThing petroleum enriched sediment Organically enriched sediment which has increased levels of petroleum. NMDCO_relaxed.owl ENVO:00002202 biolink:NamedThing organically enriched sediment Chemically-enriched sediment which has increased levels of organic compounds. NMDCO_relaxed.owl ENVO:00002180 biolink:NamedThing naphthalene enriched sediment Organically enriched sediment which has increased levels of naphthalene. NMDCO_relaxed.owl ENVO:00002182 biolink:NamedThing nitrobenzene enriched sediment Organically enriched sediment which has increased levels of nitrobenzene. NMDCO_relaxed.owl ENVO:00002201 biolink:NamedThing cis-dichloroethane contaminated sediment Organically enriched sediment which has increased levels of cis-dichloroethane. NMDCO_relaxed.owl ENVO:00002116 biolink:NamedThing contaminated soil A portion of contaminated soil is a portion of soil with elevated levels of some contaminant. NMDCO_relaxed.owl ENVO:00003082 biolink:NamedThing enriched soil A portion of enriched soil is a portion of soil with elevated levels of some material entity. NMDCO_relaxed.owl ENVO:00003083 biolink:NamedThing sarcosine enriched soil A portion of sarcosine enriched soil is a portion of soil with elevated levels of sarcosine. NMDCO_relaxed.owl ENVO:00003084 biolink:NamedThing trimethylamine enriched soil A portion of trimethylamine enriched soil is a portion of soil with elevated levels of trimethylamine. NMDCO_relaxed.owl ENVO:00003085 biolink:NamedThing skatole enriched soil A portion of skatole enriched soil is a portion of soil with elevated levels of skatole. NMDCO_relaxed.owl ENVO:00003086 biolink:NamedThing ethanol enriched soil A portion of ethanol enriched soil is a portion of soil with elevated levels of ethanol. NMDCO_relaxed.owl ENVO:00003087 biolink:NamedThing acetamide enriched soil A portion of acetamide enriched soil is a portion of soil with elevated levels of acetamide. NMDCO_relaxed.owl ENVO:00003088 biolink:NamedThing pantothenate enriched soil A portion of pantothenate enriched soil is a portion of soil with elevated levels of pantothenate. NMDCO_relaxed.owl ENVO:00003089 biolink:NamedThing testosterone enriched soil A portion of testosterone enriched soil is a portion of soil with elevated levels of testosterone. NMDCO_relaxed.owl ENVO:00003090 biolink:NamedThing kynurenate enriched soil A portion of kynurenate enriched soil is a portion of soil with elevated levels of kynurenate. NMDCO_relaxed.owl ENVO:00003091 biolink:NamedThing threonine enriched soil A portion of threonine enriched soil is a portion of soil with elevated levels of threonine. NMDCO_relaxed.owl ENVO:00003092 biolink:NamedThing salicylate enriched soil A portion of salicylate enriched soil is a portion of soil with elevated levels of salicylate. NMDCO_relaxed.owl ENVO:00003093 biolink:NamedThing poly-beta-hydroxybutyrate enriched soil A portion of poly-beta-hydroxybutyrate enriched soil is a portion of soil with elevated levels of poly-beta-hydroxybutyrate. NMDCO_relaxed.owl ENVO:00003094 biolink:NamedThing L-(+)-tartrate enriched soil A portion of L-(+)-tartrate enriched soil is a portion of soil with elevated levels of L-(+)-tartrate. NMDCO_relaxed.owl ENVO:00003095 biolink:NamedThing quinate enriched soil A portion of quinate enriched soil is a portion of soil with elevated levels of quinate. NMDCO_relaxed.owl ENVO:00003914 biolink:NamedThing chalk soil Soil which has increased levels of chalk. NMDCO_relaxed.owl ENVO:00005753 biolink:NamedThing urea enriched soil A portion of urea enriched soil is a portion of soil with elevated levels of urea. NMDCO_relaxed.owl ENVO:00005757 biolink:NamedThing bacteria enriched soil A portion of bacteria enriched soil is a portion of soil with elevated bacterial abundance. NMDCO_relaxed.owl ENVO:00005762 biolink:NamedThing chloropicrin enriched soil A portion of chloropicrin enriched soil is a portion of soil with elevated levels of chloropicrin. NMDCO_relaxed.owl ENVO:00005763 biolink:NamedThing humus-rich acidic ash soil Soil which 1) has increased levels of humus, 2) has low pH levels, 3) has increased levels of mineral ash. NMDCO_relaxed.owl ENVO:00005776 biolink:NamedThing peaty paddy field soil Paddy field soil which has increased levels of peat. NMDCO_relaxed.owl ENVO:01000427 biolink:NamedThing carbon nanotube enriched soil A portion of carbon nanotube enriched soil is a portion of soil with elevated levels of carbon nanotubes. NMDCO_relaxed.owl ENVO:06105274 biolink:NamedThing sandy loam Loam which has a high proportion of sand in its composition. NMDCO_relaxed.owl ENVO:06105275 biolink:NamedThing silty loam Loam which has a high proportion of silt in its composition. NMDCO_relaxed.owl ENVO:06105277 biolink:NamedThing clay loam Loam which has a high proportion of clay in its composition. NMDCO_relaxed.owl ENVO:00002117 biolink:NamedThing creosote contaminated soil Soil which has elevated concentrations of creosote. NMDCO_relaxed.owl ENVO:00002146 biolink:NamedThing xylene contaminated soil Soil which has elevated concentrations of xylene. NMDCO_relaxed.owl ENVO:00002875 biolink:NamedThing oil contaminated soil Soil which has elevated concentrations of oil. NMDCO_relaxed.owl ENVO:00003081 biolink:NamedThing metal contaminated soil Soil which has elevated concentrations of metals. NMDCO_relaxed.owl ENVO:00005775 biolink:NamedThing salt contaminated soil Soil which has elevated concentrations of sodium chloride. NMDCO_relaxed.owl ENVO:00002118 biolink:NamedThing sea sand NMDCO_relaxed.owl ENVO:00005799 biolink:NamedThing rocky sand NMDCO_relaxed.owl ENVO:01000350 biolink:NamedThing autoclaved sand Autoclaved sand is sand that has been sterlised by exposure to high pressure saturated steam at at least 121 degrees Celsius. NMDCO_relaxed.owl ENVO:06105272 biolink:NamedThing loamy sand Soil which is primarily composed of sand with silt and clay in progressively smaller proportions. NMDCO_relaxed.owl ENVO:06105273 biolink:NamedThing fine sand Sand which is composed primarily of fine particles. NMDCO_relaxed.owl ENVO:00002122 biolink:NamedThing arsenic-rich mud Mud which has elevated concentrations of arsenic. NMDCO_relaxed.owl ENVO:00002133 biolink:NamedThing anaerobic mud Mud which has no or neglible concentrations of dissolved oxygen. NMDCO_relaxed.owl ENVO:00002123 biolink:NamedThing bioreactor A biomaterial containment unit which is capable of 1) containing a mass of environmental material which hosts an active collection of organisms and 2) maintaining conditions which are conducive to one or more metabolic activities of the organisms it contains. NMDCO_relaxed.owl ENVO:01001816 biolink:NamedThing biomaterial containment unit A manufactured product which has been designed to contain a mass of biomaterial. NMDCO_relaxed.owl ENVO:01001817 biolink:NamedThing biomaterial culturing unit A biomaterial containment unit which is designed to allow the growth and propagation of the biomaterial it contains. NMDCO_relaxed.owl ENVO:00002124 biolink:NamedThing anaerobic bioreactor A bioreactor in which the contained material is not oxygenated (i.e. void of biologically consequential free oxygen) NMDCO_relaxed.owl ENVO:00002126 biolink:NamedThing aerobic bioreactor A bioreactor in which the contained material is well-oxygenated. NMDCO_relaxed.owl ENVO:00002152 biolink:NamedThing biofilter A bioreactor which captures and, through the biological processes maintained in the medium it contains, degrades pollutants. NMDCO_relaxed.owl ENVO:03600010 biolink:NamedThing membrane bioreactor A bioreactor which has a membrane as a part NMDCO_relaxed.owl ENVO:03600077 biolink:NamedThing photobioreactor A bioreactor which utilizes a light source to cultivate phototrophic microorganisms. NMDCO_relaxed.owl ENVO:00002125 biolink:NamedThing anaerobic dechlorinating bioreactor A device or system that supports a biologically active environment. A vessel in which is carried out a chemical process which involves organisms or biochemically active substances derived from such organisms. This process can either be aerobic or anaerobic. NMDCO_relaxed.owl ENVO:00002211 biolink:NamedThing thermophilic anaerobic methanogenic reactor An anaerobic biorector which uses elevated temperatures and appropriate chemical substrates to support the production of methane by microbial communities. NMDCO_relaxed.owl ENVO:00002213 biolink:NamedThing anaerobic sludge blanket reactor An anaerobic bioreactor which is capable of treating wastewater through the action of methanogenic microbes which form a blanket of sludge due to the upward flow in the reactor. NMDCO_relaxed.owl ENVO:00002128 biolink:NamedThing mesophilic sulfur spring A sulfur spring through which water at a temperature optimal for the growth of mesophillic microorganism (approximately 20 to 45 degrees Celsius) flows. NMDCO_relaxed.owl ENVO:00002130 biolink:NamedThing hypolimnion The dense, bottom layer of water in a thermally-stratified lake. It is the layer that lies below the thermocline. NMDCO_relaxed.owl ENVO:00002131 biolink:NamedThing epilimnion The top-most layer in a thermally stratified lake, occurring above the deeper hypolimnion. It is warmer and typically has a higher pH and dissolved oxygen concentration than the hypolimnion. NMDCO_relaxed.owl ENVO:00002269 biolink:NamedThing thermocline A cline across which temperature changes rapidly. NMDCO_relaxed.owl ENVO:01000075 biolink:NamedThing marine thermocline A thermocline which is part of a marine water body. NMDCO_relaxed.owl ENVO:00002134 biolink:NamedThing anaerobic stream sediment NMDCO_relaxed.owl ENVO:01000135 biolink:NamedThing nitrate-reducing sediment Sediment hosting and characterised by active nitrate reducing microbial communities. NMDCO_relaxed.owl ENVO:01000151 biolink:NamedThing manganese-reducing sediment Sediment hosting and characterised by active manganese reducing microbial communities. NMDCO_relaxed.owl ENVO:01000152 biolink:NamedThing iron-reducing sediment Sediment hosting and characterised by active iron reducing microbial communities. NMDCO_relaxed.owl ENVO:01000153 biolink:NamedThing sulphate-reducing sediment Sediment hosting and characterised by active sulphate reducing microbial communities. NMDCO_relaxed.owl ENVO:01000154 biolink:NamedThing carbon dioxide-reducing sediment Sediment hosting and characterised by active carbon dioxide reducing microbial communities. NMDCO_relaxed.owl ENVO:00002135 biolink:NamedThing treated wood NMDCO_relaxed.owl ENVO:00002136 biolink:NamedThing arsenate treated wood NMDCO_relaxed.owl ENVO:00002142 biolink:NamedThing borax leachate NMDCO_relaxed.owl ENVO:01000134 biolink:NamedThing hydrothermal fluid High temperature water ejected from hydrothermal vents and laden with dissolved metals and minerals as a result of percolation through crustal rocks. NMDCO_relaxed.owl ENVO:00002143 biolink:NamedThing calcite hot spring A calcic spring through which groundwater, heated by geothermal energy, flows. NMDCO_relaxed.owl ENVO:00002145 biolink:NamedThing chromate contaminated soil Soil which has elevated concentrations of chromate. NMDCO_relaxed.owl ENVO:00002147 biolink:NamedThing coal mine lake sediment Coal mine lake sediment is lake sediment which covers the bottom of a coal mine lake. NMDCO_relaxed.owl ENVO:00002209 biolink:NamedThing saline lake sediment Saline lake sediment is sediment which covers the bottom of a saline lake. NMDCO_relaxed.owl ENVO:00002148 biolink:NamedThing coarse beach sand NMDCO_relaxed.owl ENVO:00002150 biolink:NamedThing coastal sea water Coastal sea water is sea water that is adjacent to a coast. NMDCO_relaxed.owl ENVO:00002153 biolink:NamedThing compost biofilter A biofilter which contains compost and avails of the microbial communities within it to degrade pollutants. NMDCO_relaxed.owl ENVO:00002203 biolink:NamedThing inorganically enriched sediment Chemically-enriched sediment which has increased levels of inorganic compounds. NMDCO_relaxed.owl ENVO:00002155 biolink:NamedThing high-level radioactive sediment NMDCO_relaxed.owl ENVO:00002156 biolink:NamedThing Superfund site A highly contaminated site designated by the United States of America's Comprehensive Environmental Response, Compensation, and Liability Act. NMDCO_relaxed.owl ENVO:00002157 biolink:NamedThing stromatolite mat NMDCO_relaxed.owl ENVO:00003064 biolink:NamedThing drinking water Drinking water is water which may be consumed by humans with no adverse effects on their health. NMDCO_relaxed.owl ENVO:00003096 biolink:NamedThing tap water NMDCO_relaxed.owl ENVO:01000600 biolink:NamedThing rainwater Rainwater is liquid water which has precipitated in the form of droplets through the condensation of atmospheric water vapour. NMDCO_relaxed.owl ENVO:03600081 biolink:NamedThing cloud water Fresh water which is harvested from cloud. NMDCO_relaxed.owl ENVO:00002167 biolink:NamedThing platinum mine NMDCO_relaxed.owl ENVO:00002168 biolink:NamedThing gold mine NMDCO_relaxed.owl ENVO:00002169 biolink:NamedThing coal mine NMDCO_relaxed.owl ENVO:02000092 biolink:NamedThing iron mine NMDCO_relaxed.owl ENVO:02000093 biolink:NamedThing uranium mine NMDCO_relaxed.owl ENVO:00002170 biolink:NamedThing compost Manure which has been derived from the aerobically decomposed remnants of organic materials. NMDCO_relaxed.owl ENVO:00003031 biolink:NamedThing animal manure Manure which is derived from the waste products of animals. NMDCO_relaxed.owl ENVO:00002171 biolink:NamedThing hay compost NMDCO_relaxed.owl ENVO:00003033 biolink:NamedThing mushroom compost A compost which generally consists of a combination of wheat straw, dried blood, horse manure and ground chalk, composted together and is the residual compost waste generated by industrial mushroom production. NMDCO_relaxed.owl ENVO:00002173 biolink:NamedThing hospital A hospital is a building in which health care services are provided by specialized staff and equipment. NMDCO_relaxed.owl ENVO:01000932 biolink:NamedThing nursing home A building in which nursing aides and skilled nurses provide care and treatment to residents who have significant difficulty coping with the required activities of daily living. NMDCO_relaxed.owl ENVO:03501135 biolink:NamedThing acute care facility A healthcare facility which is used for short-term patient care. NMDCO_relaxed.owl ENVO:03501136 biolink:NamedThing clinical patient assessment facility A healthcare facility in which patients are medically assessed. NMDCO_relaxed.owl ENVO:03501137 biolink:NamedThing hospital unit facility A healthcare facility which 1) is located in part of a hospital and 2) is used by an organizational unit within a hospital. NMDCO_relaxed.owl ENVO:03501183 biolink:NamedThing medical clinic A healthcare facility which is used to provide outpatient health care services. NMDCO_relaxed.owl ENVO:03501193 biolink:NamedThing pharmacy A healthcare facility which is used to prepare, dispense, or sell medical drugs. NMDCO_relaxed.owl ENVO:03501230 biolink:NamedThing field hospital A healthcare facility which is a temporary hospital or mobile medical unit that takes care of casualties on-site before they can be safely transported to more permanent facilities. NMDCO_relaxed.owl ENVO:03501231 biolink:NamedThing hospice A healthcare facility which provides palliative care for the terminally ill. NMDCO_relaxed.owl ENVO:03501341 biolink:NamedThing community health centre A healthcare facility which is used by a group of general practitioners and nurses to provide healthcare services to people in a certain area. NMDCO_relaxed.owl ENVO:03501348 biolink:NamedThing veterinary facility A healthcare facility which is used to provide healthcare services to animals. NMDCO_relaxed.owl ENVO:03501350 biolink:NamedThing physician office A healthcare facility which is the office of a physician. NMDCO_relaxed.owl ENVO:00002183 biolink:NamedThing oil tank A manufactured container within which oil or other petrochemical products are stored and which these products are usually transported to end users or further storage facilities. NMDCO_relaxed.owl ENVO:00002874 biolink:NamedThing air conditioning unit A manufactuered product which is capable of removing heat and controlling the humidity of the air within a site. NMDCO_relaxed.owl ENVO:00003893 biolink:NamedThing cosmetic product A manufactured product which has been formulated to modifying the appearance of external human anatomical parts. NMDCO_relaxed.owl ENVO:00003895 biolink:NamedThing paper product A product which is composed primarily of paper. NMDCO_relaxed.owl ENVO:00003968 biolink:NamedThing air filter An air filter is a device that removes some substance from air. NMDCO_relaxed.owl ENVO:00010621 biolink:NamedThing medical instrument A manufactured product which has been designed for use in one or more medical procedures. NMDCO_relaxed.owl ENVO:01000457 biolink:NamedThing masonry unit A masonry unit is a solid piece of material, usually with a regular shape, used as a component in the construction of buildings. Masonry units are usually composed of brick, stone, marble, granite, travertine, limestone, cast stone, concrete block, glass block, stucco, tile, or cob. NMDCO_relaxed.owl ENVO:01000507 biolink:NamedThing iron sheet An iron sheet is a mass of iron which has been forged into a roughly planar form of less than 6 millimetres in thickness. NMDCO_relaxed.owl ENVO:01000514 biolink:NamedThing tile A tile is a manufactured piece of hard-wearing material such as ceramic, stone, metal, or even glass, generally used for covering roofs, floors, walls, showers, or other objects such as tabletops. Alternatively, tile can sometimes refer to similar units made from lightweight materials such as perlite, wood, and mineral wool, typically used for wall and ceiling applications. NMDCO_relaxed.owl ENVO:01000520 biolink:NamedThing latrine slab A latrine slab is a broad, flat, thick piece of solid material (typically stone or concrete) used as the floor of a latrine and which includes a hole through which excreta are deposited into a latrine pit. NMDCO_relaxed.owl ENVO:01000565 biolink:NamedThing lantern A lantern is a portable device or mounted fixture comprising a light source protected by a translucent case. NMDCO_relaxed.owl ENVO:01000566 biolink:NamedThing lamp A lamp is an object which generates heat, light, or any other form of radiation. NMDCO_relaxed.owl ENVO:01000577 biolink:NamedThing radio device A device capable of receiving and/or transmitting information encoded in electromagnetic radiation through wave modulation. NMDCO_relaxed.owl ENVO:01000578 biolink:NamedThing cassette player A cassette deck is a device capable of playing and recording audio compact cassettes. NMDCO_relaxed.owl ENVO:01000579 biolink:NamedThing television set A television set is a device that combines a tuner, display, and loudspeakers for the purpose of converting digital or analog information signals into moving images and sound. NMDCO_relaxed.owl ENVO:01000580 biolink:NamedThing telephone A telephone is a telecommunications device which converts sound into electronic signals suitable for transmission via cables or other transmission media, and reconverts such signals into sound waves. NMDCO_relaxed.owl ENVO:01000583 biolink:NamedThing refrigerator A refrigerator is a device which consists of a thermally insulated compartment and a mechanical, chemical, or electronic heat pump that transfers heat from the inside of the fridge to its external environment such that the inside of the fridge is cooled to a temperature below the ambient temperature of the room NMDCO_relaxed.owl ENVO:01000587 biolink:NamedThing piece of furniture A piece of furniture is a movable object intended to support various human activities such as seating (e.g., chairs, stools and sofas) and sleeping (e.g., beds). NMDCO_relaxed.owl ENVO:01000596 biolink:NamedThing clock A clock is an instrument which may indicate, keep, and/or co-ordinate time. NMDCO_relaxed.owl ENVO:01000604 biolink:NamedThing vehicle A vehicle is a mobile machine which transports people or cargo. NMDCO_relaxed.owl ENVO:01000610 biolink:NamedThing motor A motor is a machine designed to convert one or more forms of energy into mechanical energy. NMDCO_relaxed.owl ENVO:01000625 biolink:NamedThing manufactured cage A manufactured structure made of interspaced structural elements such as metal or wooden bars or wires held together such that they may be used to confine, contain, or protect something. NMDCO_relaxed.owl ENVO:01000865 biolink:NamedThing electric power system An electric power system is a network of electrical components used to supply, transfer and use electric power. NMDCO_relaxed.owl ENVO:01000867 biolink:NamedThing solar panel array A group of solar panels, typically belonging to the same photovoltaic system, arranged to maximise interception of solar radiation. NMDCO_relaxed.owl ENVO:01000873 biolink:NamedThing ballast tank A ballast tank is a compartment within a boat, ship or other floating structure that holds water, which is used as ballast to provide stability for a vessel. NMDCO_relaxed.owl ENVO:01000911 biolink:NamedThing automated teller machine An electronic telecommunications device that enables the customers of a financial institution to perform financial transactions, particularly cash withdrawal, without the need for a human cashier, clerk or bank teller. NMDCO_relaxed.owl ENVO:01000938 biolink:NamedThing hot tub A manufactured product which may hold a volume of heated water suitable for one or more humans to bathe in, usually for the purposes of hydrotherapy or pleasure. NMDCO_relaxed.owl ENVO:01000975 biolink:NamedThing animal trap A manufactured product which is designed to catch and hold animals. NMDCO_relaxed.owl ENVO:01000989 biolink:NamedThing plumbing fixture An exchangeable device which can be connected to a plumbing system to deliver and drain water. NMDCO_relaxed.owl ENVO:01001120 biolink:NamedThing animal manure product A product which is composed primarily of animal manure that has been heat treated and packaged as a product for commercial or consumer use. NMDCO_relaxed.owl ENVO:02000001 biolink:NamedThing textile A textile is a manufactured product comprised of a network of natural or artificial fibers (often referred to as thread or yarn). NMDCO_relaxed.owl ENVO:02000043 biolink:NamedThing biological product A biological product is an environmental substrate comprised of any virus, therapeutic serum, toxin, antitoxin, or analogous product available to prevent, treat or cure diseases or injuries in man. NMDCO_relaxed.owl ENVO:02000052 biolink:NamedThing umbrella A canopy designed to protect against precipitation or sunlight. NMDCO_relaxed.owl ENVO:03501208 biolink:NamedThing air vent A manufactured product consisting of a duct opening which allows air to circulate. NMDCO_relaxed.owl ENVO:03501210 biolink:NamedThing control panel A manufactured product consisting of a panel on which control or monitoring instruments are set. NMDCO_relaxed.owl ENVO:03501211 biolink:NamedThing door handle A manufactured product consisting of a handle used to open or close a door. NMDCO_relaxed.owl ENVO:03501214 biolink:NamedThing locker A manufactured product which is a storage compartment with a lock. NMDCO_relaxed.owl ENVO:03501219 biolink:NamedThing window A manufactured product which is composed of one or more glass or other transparent or semi-transparent materials set inside a frame, and installed in wall, door, roof or vehicle surfaces to allow the passage of light, and sometimes air. NMDCO_relaxed.owl ENVO:03501220 biolink:NamedThing door A manufactured product which is composed of a hinged, sliding, or revolving barrier which is installed at the entrance to a building, room, vehicle, or in the framework of a cabinet. NMDCO_relaxed.owl ENVO:03501251 biolink:NamedThing vacuum cleaner A device that causes suction in order to remove debris from surfaces. NMDCO_relaxed.owl ENVO:03501254 biolink:NamedThing water tank A container for storing water. NMDCO_relaxed.owl ENVO:03501260 biolink:NamedThing sewing table A manufactured product consisting of a table or desk used for sewing. NMDCO_relaxed.owl ENVO:03501261 biolink:NamedThing wheel A manufactured product consisting of a disk-shaped material that rotates around an axle bearing placed through a hole in its center. NMDCO_relaxed.owl ENVO:03501262 biolink:NamedThing tray A manufactured product consisting of a shallow platform designed for the carrying of items. NMDCO_relaxed.owl ENVO:03501263 biolink:NamedThing hand tool A manufactured product which has been designed to 1) allow a human to do work more efficiently and 2) be used in a hand-held fashion. NMDCO_relaxed.owl ENVO:03501266 biolink:NamedThing pump A device that moves fluids (liquids or gases), or sometimes slurries, by mechanical action. NMDCO_relaxed.owl ENVO:03501268 biolink:NamedThing pallet A manufactured product which is a flat transport structure that supports goods in a stable fashion while being lifted and/or moved. NMDCO_relaxed.owl ENVO:03501269 biolink:NamedThing packaging machine A device used in packaging operations. NMDCO_relaxed.owl ENVO:03501283 biolink:NamedThing conveyor belt A device consisting of a continuous flexible band moved by a series of rollers to transport objects or material from one place to another. NMDCO_relaxed.owl ENVO:03501284 biolink:NamedThing dryer A device designed to remove water or humidity. NMDCO_relaxed.owl ENVO:03501291 biolink:NamedThing broiler A part of an oven or a small stove used to broil food. NMDCO_relaxed.owl ENVO:03501292 biolink:NamedThing tote bin A portable, box-type industrial storage product used for the storage and handling or parts and materials, that may collapse to conserve space when not in use. NMDCO_relaxed.owl ENVO:03501293 biolink:NamedThing tote bag A large bag with parallel handles that emerge from the sides of its pouch. NMDCO_relaxed.owl ENVO:03501298 biolink:NamedThing stable bandage A bandage wrap used on the lower legs of a horse. NMDCO_relaxed.owl ENVO:03501310 biolink:NamedThing switch A device which can connect, disconnect, or divert current in an electrical circuit. NMDCO_relaxed.owl ENVO:03501326 biolink:NamedThing bottle A container which is typically made of glass or plastic and having a tapered neck, used primarily for holding liquids. NMDCO_relaxed.owl ENVO:03501354 biolink:NamedThing steel A manufactured product which is an alloy of iron and which typically contains a few tenths of a percent of carbon. NMDCO_relaxed.owl ENVO:03501357 biolink:NamedThing manufacturing equipment A manufactured product which is capable of some manufacturing process. NMDCO_relaxed.owl ENVO:03501359 biolink:NamedThing equipment frame A manufactured product which is a structural system on which equipment components are mounted. NMDCO_relaxed.owl ENVO:03501360 biolink:NamedThing equipment leg A manufactured product which positions a piece of equipment above a surface. NMDCO_relaxed.owl ENVO:03501363 biolink:NamedThing conveyor belt component A manufactured product which is 1) an endless belt of flexible material stretched between two drums; 2) conveys material between drum locations. NMDCO_relaxed.owl ENVO:03501368 biolink:NamedThing conveyor roller A manufactured product which is a cylindrical (or approximately cylindrical) item used under a heavy object to facilitate moving it. NMDCO_relaxed.owl ENVO:03510002 biolink:NamedThing automatic transmission fluid Fluid used for valve operation, brake band friction, and gear lubrication within an automatic vehicle transmission. NMDCO_relaxed.owl ENVO:03510004 biolink:NamedThing hydraulic fluid A medium by which power is transferred in hydraulic machinery. NMDCO_relaxed.owl ENVO:03510005 biolink:NamedThing motor oil A lubricant for internal combustion engines which 1) reduces friction and wear 2) cleans the engine 3) neutralizes acids 4) improves sealing of piston rings, and 5) cools the engine. NMDCO_relaxed.owl ENVO:03510010 biolink:NamedThing dye A coloured substance that chemically bonds to the substrate to which it is being applied NMDCO_relaxed.owl ENVO:03510014 biolink:NamedThing India ink A black or colored ink which is 1) used for writing, printing, and drawing and 2) made from fine soot (lampblack) and water. NMDCO_relaxed.owl ENVO:03510017 biolink:NamedThing fountain pen ink Water based ink intended for use with fountain ink pens. NMDCO_relaxed.owl ENVO:03510021 biolink:NamedThing varnish A clear transparent hard protective film or finish, primarily used for wood finishing applications. NMDCO_relaxed.owl ENVO:03510030 biolink:NamedThing vitreous enamel A smooth, durable vitreous coating which is made by fusing powdered glass to a substrate. NMDCO_relaxed.owl ENVO:03510034 biolink:NamedThing turpentine A fluid obtained by the distillation of resin harvested from living trees, primarily used as a solvent. NMDCO_relaxed.owl ENVO:03510035 biolink:NamedThing naphtha A flammable liquid hydrocarbon mixture produced from natural gas condensates, petroleum distillates, and the distillation of coal tar and peat. NMDCO_relaxed.owl ENVO:03600005 biolink:NamedThing electrical switch A manufactured product which is capable of connecting or disconnecting the conducting path in an electrical circuit, interrupting the electric current or diverting it from one conductor to another. NMDCO_relaxed.owl ENVO:03600022 biolink:NamedThing vinasse A manufactured product which is formed as a liquid byproduct generated during the rectification and distillation of ethanol. NMDCO_relaxed.owl ENVO:03600040 biolink:NamedThing fermentation starter A manufactured product which assists starting a fermentation process which is intended to prepare foods and alcoholic drinks. NMDCO_relaxed.owl ENVO:03600045 biolink:NamedThing plant pot A manufactured product which is designed to function as a container for growing plants. NMDCO_relaxed.owl ENVO:03600046 biolink:NamedThing processed tobacco A manufactured product which is produced by curing, subsequent aging, slow oxidation and degradation of carotenoids in tobacco leaves. NMDCO_relaxed.owl ENVO:03600048 biolink:NamedThing shower curtain A manufactured product which is composed of flexible material and is intended to be hung such that it impedes the spray of water between a shower fixture and the rest of a room. NMDCO_relaxed.owl ENVO:03600052 biolink:NamedThing water tap A manufactured product which is controls the flow of water. NMDCO_relaxed.owl ENVO:03600060 biolink:NamedThing touchscreen A manufactured product which is used to give input or control to an information processing system by touching a display screen with a special stylus or one or more fingers. NMDCO_relaxed.owl ENVO:03600079 biolink:NamedThing shredder A manufactured product which is used for cutting crops, vegetables, wood, metal, paper documents, etc into small pieces. NMDCO_relaxed.owl ENVO:03600085 biolink:NamedThing buoy A manufactured product which floats in water and can be used a navigational marker among other purposes. NMDCO_relaxed.owl ENVO:03600086 biolink:NamedThing water filter A manufactured product which is used to remove contaminants from water impeding the flow of particles or solutes. NMDCO_relaxed.owl ENVO:06105115 biolink:NamedThing fishing gear A manufactured product which is used for fishing. NMDCO_relaxed.owl ENVO:2000000 biolink:NamedThing chemical product A manufactured product that is some mixture of chemicals created through some chemical engineering process NMDCO_relaxed.owl OBI:0000968 biolink:NamedThing device A material entity that is designed to perform a function in a scientific investigation, but is not a reagent. NMDCO_relaxed.owl ENVO:00002192 biolink:NamedThing poultry litter NMDCO_relaxed.owl ENVO:00002195 biolink:NamedThing pyritic acid mine drainage NMDCO_relaxed.owl ENVO:00002197 biolink:NamedThing saline water aquarium A saline water aquarium is an aquarium which contains saline water as its primary ecological medium. NMDCO_relaxed.owl ENVO:00002198 biolink:NamedThing fresh water aquarium A fresh water aquarium is an aquarium which contains fresh water as its primary ecological medium. NMDCO_relaxed.owl ENVO:00002200 biolink:NamedThing sea ice Water ice which has formed by the freezing of sea water. NMDCO_relaxed.owl ENVO:01001557 biolink:NamedThing water-body-derived ice Ice which has formed as the result of freezing of water which was part of a water body. NMDCO_relaxed.owl ENVO:00002205 biolink:NamedThing unexploded-ordnance dump A dump which contains ammunition, or other material intended for use during combat, that still has the potential to explode. NMDCO_relaxed.owl ENVO:00002207 biolink:NamedThing self-heating coal mine waste material NMDCO_relaxed.owl ENVO:00002210 biolink:NamedThing aerobic sulfide-oxidizing bioreactor An aerobic bioreactive which contains microbial communities capable of sulfide oxidation. NMDCO_relaxed.owl ENVO:00002214 biolink:NamedThing power plant A power plant is a building which contains one or more generators which convert mechanical energy into electrical energy through the relative motion between a magnetic field and a conductor. The energy source harnessed to turn the generator varies widely. NMDCO_relaxed.owl ENVO:00003861 biolink:NamedThing industrial building An industrial building is a building within which goods are produced and, optionally, stored or within which services are rendered. NMDCO_relaxed.owl ENVO:00003323 biolink:NamedThing tannery A tannery is a building in which the skins of animals are treated with chemicals to alter the structure of their constituent proteins, creating leather. NMDCO_relaxed.owl ENVO:00003862 biolink:NamedThing dairy A dairy is a building in which animal milk is harvested and, optionally, processed for human consumption. NMDCO_relaxed.owl ENVO:00003863 biolink:NamedThing food processing building A food processing building is a building in which materials that contain or consist of essential body nutrients - such as carbohydrates, fats, proteins, vitamins, or minerals - and may be ingested and assimilated by an organism to produce energy, stimulate growth, and maintain life are converted alternative forms. NMDCO_relaxed.owl ENVO:00003864 biolink:NamedThing bakery A bakery is a building in which raw flour-based food is baked in an oven to produce food products such as bread, cakes, pastries, and pies. These products are often sold from the bakery itself. NMDCO_relaxed.owl ENVO:00003885 biolink:NamedThing brewery A brewery is a building in which alcoholic beverages are produced by brewing, that is, steeping a starch source (commonly cereal grains) in water and fermenting the resulting sweet liquid with yeast. At times, the products are also sold from the brewery. NMDCO_relaxed.owl ENVO:00004638 biolink:NamedThing sawmill A building within which logs are cut into lumber products. NMDCO_relaxed.owl ENVO:01000536 biolink:NamedThing factory A factory (previously manufactory) or manufacturing plant is an industrial site, usually consisting of buildings and machinery, or more commonly a complex having several buildings, where workers manufacture goods or operate machines processing one product into another. NMDCO_relaxed.owl ENVO:01000925 biolink:NamedThing abattoir A facility in which non-human animals are slaughtered and processed for human consumption. NMDCO_relaxed.owl ENVO:01000926 biolink:NamedThing knackery A facility in which non-human animals are slaughtered and processed, but not for human consumption. NMDCO_relaxed.owl ENVO:03501102 biolink:NamedThing polytunnel An industrial building made from steel and covered in polyethylene used for plant cultivation. NMDCO_relaxed.owl ENVO:03501123 biolink:NamedThing airport terminal An industrial building in an airport where passengers transfer between facilities and vehicles. NMDCO_relaxed.owl ENVO:03501124 biolink:NamedThing airport concourse An industrial building which provides travelers with access to airplanes. NMDCO_relaxed.owl ENVO:03501233 biolink:NamedThing warehouse An industrial building which is used to store goods. NMDCO_relaxed.owl ENVO:03600004 biolink:NamedThing drinking water treatment plant An industrial building in which water undergoes a purification process to make it fit for human consumption. NMDCO_relaxed.owl ENVO:03600075 biolink:NamedThing oil mill An industrial building in which oil-bearing seeds or vegetable materials are crushed and pressed with a grinding mill in order to extract oils. NMDCO_relaxed.owl ENVO:03600078 biolink:NamedThing oil refinery An industrial building in which crude oil is transformed and refined into useful products. NMDCO_relaxed.owl ENVO:00002215 biolink:NamedThing geothermal power plant A geothermal power plant is a power plant which uses heat generated by the decay of radioactive isotopes in the Earth's mantle and crust as well as primordial heat left over from the formation of the Earth to drive its generators. NMDCO_relaxed.owl ENVO:00002271 biolink:NamedThing nuclear power plant A nuclear power plant is a power plant which uses heat generated by a radioactive decay in a nuclear reactor to convert water into steam in order to drive turbines in electrical generators through pressure. NMDCO_relaxed.owl ENVO:03501241 biolink:NamedThing wind farm A power plant which is a group of wind turbines in the same location used to produce electricity. NMDCO_relaxed.owl ENVO:2000037 biolink:NamedThing fossil fuel power plant A power station which burns a fossil fuel such as coal, natural gas, or petroleum to produce electricity. NMDCO_relaxed.owl ENVO:2000038 biolink:NamedThing coal power plant NMDCO_relaxed.owl ENVO:2000039 biolink:NamedThing gas power station NMDCO_relaxed.owl ENVO:2000040 biolink:NamedThing lignite power plant NMDCO_relaxed.owl ENVO:2000041 biolink:NamedThing solar power station NMDCO_relaxed.owl ENVO:2000042 biolink:NamedThing ocean thermal power station NMDCO_relaxed.owl ENVO:2000043 biolink:NamedThing tidal power plant NMDCO_relaxed.owl ENVO:00002221 biolink:NamedThing shop A building in which a business presents a selection of goods and offers to trade or sell them to customers for money or other goods. NMDCO_relaxed.owl ENVO:01001222 biolink:NamedThing commercial building A building which is primarily used to facilitate the buying or selling of goods or services. NMDCO_relaxed.owl ENVO:00003963 biolink:NamedThing warehouse A warehouse is a building which is used for the storage of goods. NMDCO_relaxed.owl ENVO:01000927 biolink:NamedThing day care building A building which is used to care for a human child during the working day by a person, outside the child's immediate family, other than that child's legal guardians. NMDCO_relaxed.owl ENVO:01000934 biolink:NamedThing restaurant A building within which food and drink are prepared and served to customers in exchange for money or other goods and/or services. NMDCO_relaxed.owl ENVO:01000973 biolink:NamedThing kiosk A booth with an open window on one side. NMDCO_relaxed.owl ENVO:01001221 biolink:NamedThing office building A commercial building which contains parts used as workplaces primarily for administrative and managerial workers. NMDCO_relaxed.owl ENVO:03501206 biolink:NamedThing shopping center A commercial building in which the majority of commerical activity occurs in shops occupying parts of the building. NMDCO_relaxed.owl ENVO:03501232 biolink:NamedThing movie theater A commercial building which contains auditoria for viewing films. NMDCO_relaxed.owl ENVO:03501275 biolink:NamedThing corn exchange A commercial building where merchants trade grains. NMDCO_relaxed.owl ENVO:03501276 biolink:NamedThing oast house A commercial building designed for kilning (drying) hops. NMDCO_relaxed.owl ENVO:00002222 biolink:NamedThing food shop A shop in which a business offers food products for sale or trade. NMDCO_relaxed.owl ENVO:03501243 biolink:NamedThing big-box store A store which is physically large and is part of a retail chain. NMDCO_relaxed.owl ENVO:00002229 biolink:NamedThing arenosol Arenosols are sandy soils, including both soils developed in residual sands after in situ weathering of usually quartz-rich sediments or rock, and soils developed in recently deposited sands such as dunes in deserts and beach lands. NMDCO_relaxed.owl ENVO:00002231 biolink:NamedThing alisol Alisols are soils that have a higher clay content in the subsoil than in the topsoil as a result of pedogenetic processes (especially clay migration) leading to an argic subsoil horizon. Alisols have a low base saturation at certain depths and high-activity clays throughout the argic horizon. They lack the albeluvic tonguing as in Albeluvisols. They occur predominantly in humid tropical, humid subtropical and warm temperate regions. NMDCO_relaxed.owl ENVO:00002232 biolink:NamedThing andosol Andosols are soils that develop in volcanic ejecta or glasses under almost any climate (except under hyperarid climate conditions). However, Andosols may also develop in other silicate-rich materials under acid weathering in humid and perhumid climates. NMDCO_relaxed.owl ENVO:00002233 biolink:NamedThing albeluvisol Albeluvisols are soils that have, beginning within 1 m of the soil surface, a clay illuviation horizon with an irregular or broken upper boundary resulting in tonguing of bleached soil material into the illuviation horizon. NMDCO_relaxed.owl ENVO:00002235 biolink:NamedThing cambisol Cambisols combine soils with at least an incipient subsurface soil formation. Transformation of parent material is evident from structure formation and mostly brownish discoloration, increasing clay percentage, and/or carbonate removal. NMDCO_relaxed.owl ENVO:00002237 biolink:NamedThing chernozem Chernozems are soils with a thick black surface layer that is rich in organic matter. NMDCO_relaxed.owl ENVO:00002238 biolink:NamedThing durisol Durisols are associated mainly with old surfaces in arid and semi-arid environments and accommodate very shallow to moderately deep, moderately well- to well-drained soils that contain cemented secondary silica (SiO2) within 100 cm of the soil surface. NMDCO_relaxed.owl ENVO:00002239 biolink:NamedThing calcisol Calcisols are soils in which there is substantial secondary accumulation of lime. Calcisols are common in highly calcareous parent materials and widespread in arid and semi-arid environments. NMDCO_relaxed.owl ENVO:00002240 biolink:NamedThing kastanozem Kastanozems are dry grassland soils, among them the zonal soils of the short-grass steppe belt, south of the Eurasian tall-grass steppe belt with Chernozems. Kastanozems have a similar profile to that of Chernozems but the humus-rich surface horizon is thinner and not as dark as that of the Chernozems and they show more prominent accumulation of secondary carbonates. NMDCO_relaxed.owl ENVO:00002241 biolink:NamedThing leptosol Leptosols are very shallow soils over continuous rock and soils that are extremely gravelly and/or stony. Leptosols are azonal soils and particularly common in mountainous regions. NMDCO_relaxed.owl ENVO:00002242 biolink:NamedThing lixisol Lixisols are soils that have a higher clay content in the subsoil than in the topsoil as a result of pedogenetic processes (especially clay migration) leading to an argic subsoil horizon. Lixisols have a high base saturation and low-activity clays at certain depths. NMDCO_relaxed.owl ENVO:00002243 biolink:NamedThing histosol Histosols comprise soils formed in organic material. These vary from soils developed in predominantly moss peat in boreal, arctic and subarctic regions, via moss peat, reeds/ sedge peat (fen) and forest peat in temperate regions to mangrove peat and swamp forest peat in the humid tropics. Histosols are found at all altitudes, but the vast majority occurs in lowlands. NMDCO_relaxed.owl ENVO:00002244 biolink:NamedThing gleysol Gleysols are wetland soils that, unless drained, are saturated with groundwater for long enough periods to develop a characteristic gleyic colour pattern. This pattern is essentially made up of reddish, brownish or yellowish colours at ped surfaces and/or in the upper soil layer or layers, in combination with greyish/bluish colours inside the peds and/or deeper in the soil. NMDCO_relaxed.owl ENVO:00002245 biolink:NamedThing gypsisol Gypsisols are soils with substantial secondary accumulation of gypsum (calcium sulfate). These soils are found in the driest parts of the arid climate zone. NMDCO_relaxed.owl ENVO:00002246 biolink:NamedThing ferralsol Ferralsols represent the classical, deeply weathered, red or yellow soils of the humid tropics. These soils have diffuse horizon boundaries, a clay assemblage dominated by low-activity clays (mainly kaolinite) and a high content of sesquioxides. NMDCO_relaxed.owl ENVO:00002247 biolink:NamedThing nitisol Nitisols are deep, well-drained, red, tropical soils with diffuse horizon boundaries and a subsurface horizon with more than 30 percent clay and moderate to strong angular blocky structure elements that easily fall apart into characteristic shiny, polyhedric (nutty) elements. Weathering is relatively advanced but Nitisols are far more productive than most other red, tropical soils. NMDCO_relaxed.owl ENVO:00002248 biolink:NamedThing luvisol Luvisols are soils that have a higher clay content in the subsoil than in the topsoil as a result of pedogenetic processes (especially clay migration) leading to an argic subsoil horizon. Luvisols have high-activity clays throughout the argic horizon and a high base saturation at certain depths. NMDCO_relaxed.owl ENVO:00002249 biolink:NamedThing phaeozem Phaeozems accommodate soils of relatively wet grassland and forest regions in moderately continental climates. Phaeozems are much like Chernozems and Kastanozems but are leached more intensively. Consequently, they have dark, humus rich surface horizons that, in comparison with Chernozems and Kastanozems, are less rich in bases. Phaeozems may or may not have secondary carbonates but have a high base saturation in the upper metre of the soil. NMDCO_relaxed.owl ENVO:00002250 biolink:NamedThing plinthosol Plinthosols are soils with plinthite, petroplinthite or pisoliths. Plinthite is an Fe-rich (in some cases also Mn-rich), humus-poor mixture of kaolinitic clay (and other products of strong weathering such as gibbsite) with quartz and other constituents that changes irreversibly to a layer with hard nodules, a hardpan or irregular aggregates on exposure to repeated wetting and drying. Petroplinthite is a continuous, fractured or broken sheet of connected, strongly cemented to indurated nodules or mottles. Pisoliths are discrete strongly cemented to indurated nodules. Both petroplinthite and pisoliths develop from plinthite by hardening. NMDCO_relaxed.owl ENVO:00002251 biolink:NamedThing planosol Planosols are soils with a light-coloured, surface horizon that shows signs of periodic water stagnation and abruptly overlies a dense, slowly permeable subsoil with significantly more clay than the surface horizon. NMDCO_relaxed.owl ENVO:00002252 biolink:NamedThing solonchak Solonchaks are soils that have a high concentration of soluble salts at some time in the year. Solonchaks are largely confined to the arid and semi-arid climate zones and to coastal regions in all climates. NMDCO_relaxed.owl ENVO:00002253 biolink:NamedThing umbrisol Umbrisols are soils in which organic matter has accumulated within the mineral surface soil (in most cases with low base saturation) to the extent that it significantly affects the behaviour and utilization of the soil. NMDCO_relaxed.owl ENVO:00002254 biolink:NamedThing vertisol A soil in which there is a high content of expansive clay known as montmorillonite that forms deep cracks in drier seasons or years. Alternate shrinking and swelling causes self-mulching, where the soil material consistently mixes itself, causing vertisols to have an extremely deep A horizon and no B horizon. NMDCO_relaxed.owl ENVO:00002255 biolink:NamedThing solonetz Solonetz are soils with a dense, strongly structured, clayey subsurface horizon that has a high proportion of adsorbed Na and/or Mg ions. Solonetz that contain free soda (Na2CO3) are strongly alkaline (field pH > 8.5). NMDCO_relaxed.owl ENVO:00002256 biolink:NamedThing regosol Regosols form a taxonomic remnant group containing all soils that could not be accommodated in any of the other RSGs. In practice, Regosols are very weakly developed mineral soils in unconsolidated materials that do not have a mollic or umbric horizon, are not very shallow or very rich in gravels (Leptosols), sandy (Arenosols) or with fluvic materials (Fluvisols). Regosols are extensive in eroding lands, particularly in arid and semi-arid areas and in mountainous terrain. NMDCO_relaxed.owl ENVO:00002257 biolink:NamedThing podzol Podzols are soils with a typically ash-grey upper subsurface horizon, bleached by loss of organic matter and iron oxides, on top of a dark accumulation horizon with brown, reddish or black illuviated humus and/or reddish Fe compounds. Podzols occur in humid areas in the boreal and temperate zones and locally also in the tropics. NMDCO_relaxed.owl ENVO:00002258 biolink:NamedThing loam A soil which is composed of approximately equal proportions of sand and silt, with a smaller proportion of clay. NMDCO_relaxed.owl ENVO:00002259 biolink:NamedThing agricultural soil Soil which is part of an ecosystem used for agricultural activities. NMDCO_relaxed.owl ENVO:00002261 biolink:NamedThing forest soil A portion of soil which is found in a forested area. NMDCO_relaxed.owl ENVO:00002262 biolink:NamedThing clay soil Soil which is primarily composed of clay. NMDCO_relaxed.owl ENVO:00002263 biolink:NamedThing garden soil A portion of soil which is found in a garden. NMDCO_relaxed.owl ENVO:00002273 biolink:NamedThing fluvisol Fluvisols accommodate genetically young, azonal soils in alluvial deposits. NMDCO_relaxed.owl ENVO:00002274 biolink:NamedThing stagnosol Stagnosols are soils with a perched water table showing redoximorphic features caused by surface water. Stagnosols are periodically wet and mottled in the topsoil and subsoil, with or without concretions and/or bleaching. NMDCO_relaxed.owl ENVO:00002275 biolink:NamedThing technosol Technosols are soils whose properties and pedogenesis are dominated by their technical origin. They contain a significant amount of artefacts (something in the soil recognizably made or extracted from the earth by humans), or are sealed by technic hard rock (material created by humans, having properties unlike natural rock). They include soils from wastes (landfills, sludge, cinders, mine spoils and ashes), pavements with their underlying unconsolidated materials, soils with geomembranes and constructed soils in human-made materials. NMDCO_relaxed.owl ENVO:00002871 biolink:NamedThing alluvial soil Soil which has been eroded and influenced by flowing water and redeposited in a non-marine setting. NMDCO_relaxed.owl ENVO:00005741 biolink:NamedThing alpine soil Soil which is part of an alpine environment. NMDCO_relaxed.owl ENVO:00005742 biolink:NamedThing arable soil Soil which is capable of supporting the growth of crops. NMDCO_relaxed.owl ENVO:00005743 biolink:NamedThing roadside soil A portion of soil which is found in a roadside area. NMDCO_relaxed.owl ENVO:00005744 biolink:NamedThing allotment garden soil Soil which is part of an allotment garden. NMDCO_relaxed.owl ENVO:00005747 biolink:NamedThing compost soil Soil which is derived from compost. NMDCO_relaxed.owl ENVO:00005748 biolink:NamedThing dry soil Soil which has little to no water content and in which minerals and other soluble chemical entities have either bonded or become adsorbed to sold particles due to insufficient water availability. NMDCO_relaxed.owl ENVO:00005749 biolink:NamedThing farm soil A portion of soil which is part of a cropland or a rangeland biome. NMDCO_relaxed.owl ENVO:00005750 biolink:NamedThing grassland soil A portion of soil which is found in a grassland. NMDCO_relaxed.owl ENVO:00005751 biolink:NamedThing jungle soil Soil which is part of a densely forested area subject to tropical climate patterns. NMDCO_relaxed.owl ENVO:00005752 biolink:NamedThing sawah soil Soil which is part of a sawah, a wet or irrigated rice field. NMDCO_relaxed.owl ENVO:00005754 biolink:NamedThing fertilized soil Soil which has been amended with fertilizers. NMDCO_relaxed.owl ENVO:00005755 biolink:NamedThing field soil Soil which is part of an agricultural field. NMDCO_relaxed.owl ENVO:00005756 biolink:NamedThing lawn soil Soil which is formulated to promote the growth of grasses or other plants used to establish managed areas of vegetation. NMDCO_relaxed.owl ENVO:00005760 biolink:NamedThing burned soil Soil which has been transformed through a combustion process. NMDCO_relaxed.owl ENVO:00005761 biolink:NamedThing meadow soil Soil which is part of a meadow. NMDCO_relaxed.owl ENVO:00005764 biolink:NamedThing pond soil Soil which is adjacent to a pond. NMDCO_relaxed.owl ENVO:00005766 biolink:NamedThing limed soil Soil which has been amended with mineral additives to increase its pH. NMDCO_relaxed.owl ENVO:00005767 biolink:NamedThing manured soil Soil which has, as a part, a portion of either fresh or processed animal manure. NMDCO_relaxed.owl ENVO:00005768 biolink:NamedThing orchid soil Soil which has properties to which plants in the Family Orchidaceae have adapted, including increased levels of aeration and drainage. NMDCO_relaxed.owl ENVO:00005771 biolink:NamedThing muddy soil Soil which is composed of a large proportion of mud, thus having properties resembling mud. NMDCO_relaxed.owl ENVO:00005772 biolink:NamedThing orchard soil Soil in which trees from an orchard grow. NMDCO_relaxed.owl ENVO:00005773 biolink:NamedThing pasture soil Soil which is found in a pasture and in which vegetation, such as the grass used for the grazing of ungulates, grows. NMDCO_relaxed.owl ENVO:00005778 biolink:NamedThing tropical soil Soil which is part of a tropical environment. NMDCO_relaxed.owl ENVO:00005780 biolink:NamedThing greenhouse soil A portion of soil which is found in a greenhouse. NMDCO_relaxed.owl ENVO:00005781 biolink:NamedThing heat stressed soil Soil which is has been heated such that its chemical, physical, or biological properties are destabilised. NMDCO_relaxed.owl ENVO:00005782 biolink:NamedThing ornithogenic soil Soil which is formed from avian fecal matter. NMDCO_relaxed.owl ENVO:00005786 biolink:NamedThing upland soil Soil which is part of some elevated land. NMDCO_relaxed.owl ENVO:00005790 biolink:NamedThing red soil Soil which has 1) low concentrations of nutrients and humus, 2) low water retention capacity, 3) textural variation from sand to clay, 4) a porous and friable structure, and 5) low concentrations of soluble salts. NMDCO_relaxed.owl ENVO:00005802 biolink:NamedThing bulk soil Soil that is not penetrated by the root systems of plants. NMDCO_relaxed.owl ENVO:01001185 biolink:NamedThing acidic soil Soil which has increased levels of molecules or ions capable of donating a hydron (proton or hydrogen ion) to other chemical entities, or, alternatively, capable of forming covalent bonds with other chemicals via the acceptance of an electron pair, resulting in a bulk pH measurement of less than 7. NMDCO_relaxed.owl ENVO:01001397 biolink:NamedThing ultisol A soil which has high mineral content and which contain no calcareous material, have less than 10% weatherable minerals its surface layer, and have less than 35% base saturation throughout its volume. NMDCO_relaxed.owl ENVO:01001526 biolink:NamedThing frozen soil Soil which is below the freezing point of water. NMDCO_relaxed.owl ENVO:01001616 biolink:NamedThing bare soil Soil which is directly exposed to the atmosphere - with no intervening layer of plant life or other cover - and thus the effects of weathering and erosion. NMDCO_relaxed.owl ENVO:01001638 biolink:NamedThing frost-susceptible soil Soil in which segregated ice will form (causing frost heave) under the required conditions of moisture supply and temperature. NMDCO_relaxed.owl ENVO:02000059 biolink:NamedThing surface soil A soil consisting of the upper layer of soil on the surface consisting of loose material capable of supporting life composed of a mixture of mineral and organic matter. NMDCO_relaxed.owl ENVO:02000138 biolink:NamedThing mangrove biome soil Soil which is located in a mangrove biome. NMDCO_relaxed.owl ENVO:03600036 biolink:NamedThing pathogen-suppressive soil Soil which has properties that restrict a pathogen's ability to establish itself, persist, or cause disease that results in long-term harm. NMDCO_relaxed.owl ENVO:06105205 biolink:NamedThing compacted soil A soil which has a high bulk density and/or a low porosity. A compacted soil has a reduced rate of both water infiltration and drainage NMDCO_relaxed.owl ENVO:00002234 biolink:NamedThing acrisol Acrisols are soils that have a higher clay content in the subsoil than in the topsoil as a result of pedogenetic processes (especially clay migration) leading to an argic subsoil horizon. Acrisols have in certain depths a low base saturation and low-activity clays. NMDCO_relaxed.owl ENVO:00002236 biolink:NamedThing cryosol Cryosols comprise mineral soils formed in a permafrost environment. Where water is present, it occurs primarily in the form of ice. Cryogenic processes are the dominant soil-forming processes. NMDCO_relaxed.owl ENVO:00005765 biolink:NamedThing frozen compost soil Compost soil which is frozen. NMDCO_relaxed.owl ENVO:01001527 biolink:NamedThing plastic-frozen soil Frozen soil which is cemented by water ice but has viscous properties due to its high, unfrozen water content and therefore will compress and deform under load. NMDCO_relaxed.owl ENVO:00002260 biolink:NamedThing dune soil Soil which is part of some dune. NMDCO_relaxed.owl ENVO:00005769 biolink:NamedThing mountain forest soil Soil which is part of a forest growing on a mountain. NMDCO_relaxed.owl ENVO:00002266 biolink:NamedThing chicken breeding waste material NMDCO_relaxed.owl ENVO:01000258 biolink:NamedThing fluid cline A fluid front which is 1) thin in comparison to the fluid mass it is a part of and 2) across which a property of that fluid mass varies greatly over short vertical distance, relative to variation across the entire fluid mass. NMDCO_relaxed.owl ENVO:00002270 biolink:NamedThing chemocline A cline across which the chemical composition of a fluid changes rapidly. NMDCO_relaxed.owl ENVO:01000071 biolink:NamedThing oceanic front An oceanic front is a narrow zone of enhanced horizontal gradients of water properties (temperature, salinity, nutrients, etc.) that separates broader areas with different water masses or different vertical structure (stratification). NMDCO_relaxed.owl ENVO:01000259 biolink:NamedThing pycnocline A cline across which the density of a fluid changes rapidly. NMDCO_relaxed.owl ENVO:01001674 biolink:NamedThing lysocline A cline across which one or more solid environmental materials dissolve into their surrounding fluid. NMDCO_relaxed.owl ENVO:01001675 biolink:NamedThing nutricline A cline across which nutrient content of a fluid changes rapidly. NMDCO_relaxed.owl ENVO:00002276 biolink:NamedThing animal waste material NMDCO_relaxed.owl ENVO:00002873 biolink:NamedThing organic waste material NMDCO_relaxed.owl ENVO:00002277 biolink:NamedThing back-arc basin A depression in the sea floor that results from the collision of continental plates; the weight of the sinking plate causes the overlying plate to stretch and thin, causing a basin in the overlying plate. Sometimes, the Earth's crust in these basins stretches so much it cracks, allowing magma through from the mantle beneath. Hence, basins often contain active volcanoes and hydrothermal vents. NMDCO_relaxed.owl ENVO:00002450 biolink:NamedThing ocean basin A structural basin that is below sea level. NMDCO_relaxed.owl ENVO:00002869 biolink:NamedThing hay Hay is grass, legumes or other herbaceous plants that have been cut, dried, and stored for use as animal fodder, particularly for grazing livestock such as cattle, horses, goats, and sheep. NMDCO_relaxed.owl ENVO:00003030 biolink:NamedThing silage A fermented, high-moisture forage that can be fed to ruminants. NMDCO_relaxed.owl ENVO:00003869 biolink:NamedThing straw An agricultural byproduct, the dry stalk of a cereal plant, after the nutrient grain or seed has been removed. NMDCO_relaxed.owl ENVO:01000473 biolink:NamedThing thatch Thatch is material composed of dry vegetation such as straw, water reed, sedge (Cladium mariscus), rushes, or heather. NMDCO_relaxed.owl ENVO:01001113 biolink:NamedThing forage material Material which is primarily conposed of the vegetation present in tended pastures: mainly grasses, with an interspersion of legumes and other forbs. NMDCO_relaxed.owl ENVO:02000053 biolink:NamedThing hide A skin obtained from animals for human use typically from deer or cattle sources used to produce leather, shoes, fashion accessories, musical instruments. NMDCO_relaxed.owl ENVO:03000133 biolink:NamedThing agricultural potting mixture An agricultural environmental material which 1) is composed of a mixture of materials such as peat, composted bark, sand, perlite, or compost, and 2) serves as a medium in which to grow plants. NMDCO_relaxed.owl ENVO:00002926 biolink:NamedThing warm seep NMDCO_relaxed.owl ENVO:01000263 biolink:NamedThing cold seep MERGED DEFINITION: TARGET DEFINITION: A cold seep is a seep in which methane and other hydrocarbon-rich fluids rise to the sea floor. -------------------- SOURCE DEFINITION: An area of the ocean floor where hydrogen sulfide, methane and other hydrocarbon-rich fluid seepage occurs. Cold seeps are distinct from hydrothermal vents: the former's emissions are of the same temperature as the surrounding seawater, whereas the latter's emissions are super-heated. NMDCO_relaxed.owl ENVO:01000265 biolink:NamedThing hydrothermal seep A hydrothermal seep is a seep in which diffuse flow of geothermally heated fluids with high methane concentrations. This seep has been proposed as an intermediate between cold seeps and hydrothermal vents. NMDCO_relaxed.owl ENVO:00002983 biolink:NamedThing fuel oil An oil which 1) is liquid at room temperature (approximately 20 degrees Celsius) 2) is intended to be burned in a furnace or boiler for the generation of heat or used in an engine for the generation of power, 3) is obtained from petroleum distillation, either as a distillate or a residue, 4) composed of long hydrocarbon chains, particularly alkanes, cycloalkanes and aromatics. NMDCO_relaxed.owl ENVO:00002984 biolink:NamedThing petroleum A naturally occurring flammable liquid consisting of a complex mixture of hydrocarbons of various molecular weights and other liquid organic compounds, that are found in geologic formations beneath the planetary surfaces. NMDCO_relaxed.owl ENVO:00003903 biolink:NamedThing aviation fuel NMDCO_relaxed.owl ENVO:01001139 biolink:NamedThing methane ice Ice which is primarily composed of methane. NMDCO_relaxed.owl ENVO:01001238 biolink:NamedThing residual kerogen Kerogen which has a hydrogen to carbon ratio less than 0.5 and primarily composed of polycyclic aromatic hydrocarbons. NMDCO_relaxed.owl ENVO:00003032 biolink:NamedThing fresh animal manure NMDCO_relaxed.owl ENVO:00003859 biolink:NamedThing horse manure NMDCO_relaxed.owl ENVO:00003860 biolink:NamedThing pig manure Manure which is primarily composed of pig feces. NMDCO_relaxed.owl ENVO:00003884 biolink:NamedThing farmyard manure NMDCO_relaxed.owl ENVO:00003927 biolink:NamedThing stable manure NMDCO_relaxed.owl ENVO:01001116 biolink:NamedThing bovine dairy liquid manure Manure which has been collected directly or indirectly from dairy cattle, as from flushing of manure from concrete feed lanes, free stalls, and milking facilities. NMDCO_relaxed.owl ENVO:01001117 biolink:NamedThing poultry manure Manure which is composed primarily of the feces of poultry. NMDCO_relaxed.owl ENVO:01001118 biolink:NamedThing heat-treated animal manure Manure which has been subjected to heat treatment for solidification and/or sterilization purposes. NMDCO_relaxed.owl ENVO:01001119 biolink:NamedThing composted animal manure Manure which has been subjected to a natural process of 'rotting' or decomposition of its organic matter content by microorganisms under controlled conditions. NMDCO_relaxed.owl ENVO:02000084 biolink:NamedThing goat manure NMDCO_relaxed.owl ENVO:00003040 biolink:NamedThing animal house A house used for sheltering non-human animals. NMDCO_relaxed.owl ENVO:01000417 biolink:NamedThing house A house is a building that provides a dwelling-place for a living entity. NMDCO_relaxed.owl ENVO:01000418 biolink:NamedThing human house NMDCO_relaxed.owl ENVO:00003041 biolink:NamedThing cow shed An animal house which is used to shelter cows. NMDCO_relaxed.owl ENVO:00003042 biolink:NamedThing piggery An animal house which is used to house pigs. NMDCO_relaxed.owl ENVO:01000918 biolink:NamedThing open animal house An animal house which is only partially surrounded by a building envelope. NMDCO_relaxed.owl ENVO:01000921 biolink:NamedThing closed animal house An animal house which has a complete building envelope. NMDCO_relaxed.owl ENVO:03501258 biolink:NamedThing chicken house An animal house where fowl are kept. NMDCO_relaxed.owl ENVO:03501287 biolink:NamedThing livestock house An animal house used for housing livestock. NMDCO_relaxed.owl ENVO:03501352 biolink:NamedThing animal rescue shelter An animal house which houses stray, lost, abandoned or surrendered animals. NMDCO_relaxed.owl ENVO:00003044 biolink:NamedThing brine Water saturated or nearly saturated with salt (NaCl). NMDCO_relaxed.owl ENVO:00003045 biolink:NamedThing bacon curing brine NMDCO_relaxed.owl ENVO:00003071 biolink:NamedThing grass silage NMDCO_relaxed.owl ENVO:00003978 biolink:NamedThing potato silage NMDCO_relaxed.owl ENVO:00003076 biolink:NamedThing glue A function realised by an environmental material when used to bind material entities together. NMDCO_relaxed.owl ENVO:03510066 biolink:NamedThing chemical colorant A function which is realised by a chemical when applied to a material, such that it alters the material's colour. NMDCO_relaxed.owl OBI:0000401 biolink:NamedThing environment control function An environmental control function is a function that regulates a contained environment within specified parameter ranges. For example the control of light exposure, humidity and temperature. NMDCO_relaxed.owl ENVO:01000524 biolink:NamedThing outhouse An outhouse is a small structure, separate from a main building, which covers a pit latrine or a dry toilet. NMDCO_relaxed.owl ENVO:01000531 biolink:NamedThing covered latrine A covered latrine is a building which comprises a latrine sheltered by an outhouse. NMDCO_relaxed.owl ENVO:01000781 biolink:NamedThing public building A building which is publically accessible. NMDCO_relaxed.owl ENVO:01001480 biolink:NamedThing domestic building A building which is primarily used for the long-term habitation of humans. NMDCO_relaxed.owl ENVO:03501126 biolink:NamedThing church building A building which is primarily used for Christian religious activities. NMDCO_relaxed.owl ENVO:03501127 biolink:NamedThing conference venue A building which accomodates conferences. NMDCO_relaxed.owl ENVO:03501197 biolink:NamedThing institutional building A building which is used by an organization which serves a long-established role in human society. NMDCO_relaxed.owl ENVO:03501235 biolink:NamedThing leisure centre A public building or site which provides facilities used by people to keep fit or relax. NMDCO_relaxed.owl ENVO:03501257 biolink:NamedThing barn An agricultural building used for crop storage or animal husbandry. NMDCO_relaxed.owl ENVO:03501270 biolink:NamedThing chapter house A building or room that is part of a cathedral, monastery or collegiate church, in which larger meetings are held. NMDCO_relaxed.owl ENVO:03501271 biolink:NamedThing Kaaba A building which is at the center of Islam's most important mosque, the Great Mosque of Mecca. NMDCO_relaxed.owl ENVO:03501272 biolink:NamedThing mosque A building which is a place of worship for Muslims. NMDCO_relaxed.owl ENVO:03501273 biolink:NamedThing listed building A building that has been placed on one of the four statutory lists maintained by Historic England in England, Historic Environment Scotland in Scotland, Cadw in Wales, and the Northern Ireland Environment Agency in Northern Ireland. NMDCO_relaxed.owl ENVO:03501277 biolink:NamedThing orangery A building that formed a very large fruit tree green house, or conservatory, on the grounds of fashionable residences from the 17th to the 19th centuries. NMDCO_relaxed.owl ENVO:03501278 biolink:NamedThing skyscraper A building which historically has at least 10 floors. NMDCO_relaxed.owl ENVO:03501280 biolink:NamedThing mausoleum A public building constructed as a external, free-standing monument enclosing the interment space or burial chamber of a deceased person or people. NMDCO_relaxed.owl ENVO:03501337 biolink:NamedThing temple A building reserved in which religious or spiritual rituals and activities such as prayer and sacrifice are performed. NMDCO_relaxed.owl ENVO:03501340 biolink:NamedThing community service centre A public building in which health, recreation or other public services to a local community are provided. NMDCO_relaxed.owl ENVO:03501347 biolink:NamedThing hotel A building which 1) containing multiple dwellings of pre-furnished accomodation and 2) is rented on a short term and/or longer-term basis. NMDCO_relaxed.owl ENVO:00003870 biolink:NamedThing rice straw NMDCO_relaxed.owl ENVO:00003894 biolink:NamedThing face cream product A cosmetic product which has been formulated 2) to have a viscous, fatty, liquid consistency resembling the fat-rich component of milk and 2) to be applied to human facial skin to modify its appearance or functioning. NMDCO_relaxed.owl ENVO:00003896 biolink:NamedThing currency note A paper product which is used as legal tender in economic or other monetary trasactions. NMDCO_relaxed.owl ENVO:01001887 biolink:NamedThing letter paper A paper product which has been manufactured to facilitate the writing of letters. NMDCO_relaxed.owl ENVO:03501217 biolink:NamedThing tissue paper A paper product which is thin translucent paper. NMDCO_relaxed.owl ENVO:03501256 biolink:NamedThing sheet of paper A paper product which is a thin sheet material made of processed cellulose fibres. NMDCO_relaxed.owl ENVO:00003900 biolink:NamedThing rye grass silage NMDCO_relaxed.owl ENVO:00003908 biolink:NamedThing poultry deep litter NMDCO_relaxed.owl ENVO:00003911 biolink:NamedThing sake brewery A sake brewery is a brewery which produces rice wine by fermenting rice which has been polished to remove the bran. NMDCO_relaxed.owl ENVO:00003919 biolink:NamedThing research station A building or collection of co-located buildings constructed for the purpose of undertaking scientific research. NMDCO_relaxed.owl ENVO:00011764 biolink:NamedThing ocean time series station A research facility consisting of instruments that measure the properties of the oceans over time. Usually of at least approximately fixed location. NMDCO_relaxed.owl ENVO:01001406 biolink:NamedThing laboratory facility A research facility in which systems of manufactured products control internal conditions and in which scientific or technological research, experiments, and measurement may be performed. NMDCO_relaxed.owl ENVO:00003964 biolink:NamedThing tobacco warehouse A tobacco warehouse is a warehouse used to store cured leaves of plants from the genus Nicotiana, primarily N. tabacum and N. rustica. NMDCO_relaxed.owl ENVO:00003965 biolink:NamedThing anaerobic digester sludge NMDCO_relaxed.owl ENVO:00003967 biolink:NamedThing creamery A creamery is a part of a dairy where cream is separated from whole milk. NMDCO_relaxed.owl ENVO:01000421 biolink:NamedThing indoor kitchen An indoor kitchen is a room or part of a room primarily used for cooking or food preparation, but which may have other funcitons such as dining, food storage, dishwashing, or laundry. NMDCO_relaxed.owl ENVO:01000426 biolink:NamedThing room A building part which is separated from other building parts by one or more interior walls and, optionally, outdoor areas by one or more exterior walls. NMDCO_relaxed.owl ENVO:01000465 biolink:NamedThing building wall Building walls are bulding parts which serve to support roofs, floors and ceilings; enclose a space as part of the building envelope; give buildings form; and to provide shelter and security. NMDCO_relaxed.owl ENVO:01000470 biolink:NamedThing building envelope A building envelope is a building part composed of those building parts which physically separate the interior of a building from its surrounding environment. The building envelope provides resistance to air, water, heat, light, and noise transfer. The three basic elements of a building envelope are a weather barrier, air barrier, and thermal barrier. NMDCO_relaxed.owl ENVO:01000471 biolink:NamedThing ceiling NMDCO_relaxed.owl ENVO:01000472 biolink:NamedThing building roof A roof is the covering on the uppermost part of a building which provides protection from animals and weather, notably rain, but also heat, wind and sunlight. A roof is also the framing or structure which supports the covering NMDCO_relaxed.owl ENVO:01000825 biolink:NamedThing eaves A part of a building roof which overhangs the face of a wall and, normally, projects beyond the side of a building. NMDCO_relaxed.owl ENVO:01001224 biolink:NamedThing office A building part within which administrative work is done by an organisations users in order to support and realise the objectives of that organization. NMDCO_relaxed.owl ENVO:03501121 biolink:NamedThing building corridor A building part which is a narrow hall or passage in a building with rooms leading off it. NMDCO_relaxed.owl ENVO:03501301 biolink:NamedThing baseboard A building part consisting of a board covering the joint between the lowest part of an interior wall surface and the floor. NMDCO_relaxed.owl ENVO:03600000 biolink:NamedThing cleanroom A building part which is maintained such that the number of foreign particulates within it is controlled. NMDCO_relaxed.owl ENVO:03600008 biolink:NamedThing intensive care unit A building part which has been constructed to support the provision of intensive care medicine to patients with severe or life-threatening illnesses and injuries. NMDCO_relaxed.owl ENVO:00005739 biolink:NamedThing sea foam A foamy environmental material which 1) is created by the agitation of seawater, 2) whose stability depends on the content of the seawater. NMDCO_relaxed.owl ENVO:00005740 biolink:NamedThing paddy field soil Soil which is part of a paddy field. NMDCO_relaxed.owl ENVO:00005788 biolink:NamedThing rubber plantation soil NMDCO_relaxed.owl ENVO:00005789 biolink:NamedThing bluegrass field soil Bluegrass field soil is a soil which is found in a field of Kentucky Bluegrass (Poa pratensis). NMDCO_relaxed.owl ENVO:00005779 biolink:NamedThing vegetable garden soil Garden soil which is part of a garden used for the cultivation of vegetables. NMDCO_relaxed.owl ENVO:00005745 biolink:NamedThing allotment garden A garden which is made available for individual, non-commercial gardening or growing food plants. NMDCO_relaxed.owl ENVO:00010624 biolink:NamedThing botanical garden A place where a wide variety of plants primarily categorized and documented for scientific purposes. NMDCO_relaxed.owl ENVO:00010625 biolink:NamedThing zoological garden A facility in which animals are confined within enclosures and displayed to the public, and in which they may also be bred. NMDCO_relaxed.owl ENVO:01000419 biolink:NamedThing domestic garden A garden that is associated with a human house. This association is generally one of spatial proximity or parthood. NMDCO_relaxed.owl ENVO:00005746 biolink:NamedThing savanna soil A portion of soil which is found in a savanna. NMDCO_relaxed.owl ENVO:00005777 biolink:NamedThing steppe soil A portion of soil which is found in a steppe. NMDCO_relaxed.owl ENVO:00005758 biolink:NamedThing alluvial swamp soil A portion of alluvial soil which is part of a swamp ecosystem. NMDCO_relaxed.owl ENVO:00005759 biolink:NamedThing alluvial paddy field soil Alluvial soil whichi is part of a paddy field. NMDCO_relaxed.owl ENVO:00005770 biolink:NamedThing beech forest soil Soil which is part of a forest whose communites of arborescent plants are dominated the genus Fagus. NMDCO_relaxed.owl ENVO:00005783 biolink:NamedThing leafy wood soil Soil which is part of a woodland dominated by leafy trees. NMDCO_relaxed.owl ENVO:00005784 biolink:NamedThing spruce forest soil Soil which is part of a forest whose communites of arborescent plants are dominated the genus Picea. NMDCO_relaxed.owl ENVO:00005787 biolink:NamedThing eucalyptus forest soil Soil which is part of a forest whose communites of arborescent plants are dominated the genus Eucalyptus. NMDCO_relaxed.owl ENVO:00005774 biolink:NamedThing peat soil A histosol which is formed by the decomposition of vegetation or organic matter. NMDCO_relaxed.owl ENVO:00005794 biolink:NamedThing water scum NMDCO_relaxed.owl ENVO:00010005 biolink:NamedThing soil bulk density A volumetric density quality which inheres in soil by virtue of some influence exerted by the soil's mass on a given volume. NMDCO_relaxed.owl ENVO:09200005 biolink:NamedThing mass density of soil The mass density of some soil. NMDCO_relaxed.owl PATO:0001353 biolink:NamedThing volumetric density A density quality which inheres in a bearer by virtue of some influence exerted by the bearer's mass on a given volume. NMDCO_relaxed.owl ENVO:00010358 biolink:NamedThing fomite A fomite is any inanimate object or substance capable of carrying infectious organisms (such as germs or parasites) and hence transferring them from one individual to another. A fomite can be anything such as a cloth or mop heads so when cleaning this is important to remember that this could aid when spreading pathogenic organisms. NMDCO_relaxed.owl ENVO:01000498 biolink:NamedThing pole A solid, cylindrical object or column with its length greater than its diameter. NMDCO_relaxed.owl ENVO:01000804 biolink:NamedThing astronomical object An object which is composed of one or more gravitationally bound structures that are associated with a position in space. NMDCO_relaxed.owl ENVO:01001008 biolink:NamedThing meteor A meteor is any matter- or energy-based entity which is located in the atmosphere of an astronomical body. NMDCO_relaxed.owl ENVO:01001686 biolink:NamedThing mass of environmental material An object which is composed primarily of an environmental material NMDCO_relaxed.owl ENVO:0010162 biolink:NamedThing dry stream valley A dry valley which was formed as a result of erosion due to stream formation and flow. NMDCO_relaxed.owl ENVO:0010163 biolink:NamedThing dry river valley A dry stream valley which was formed as a result of erosion due to river formation and flow. NMDCO_relaxed.owl ENVO:01000002 biolink:NamedThing water well A well which provides access to groundwater held in an aquifer. NMDCO_relaxed.owl ENVO:01000003 biolink:NamedThing oil well A well which has been drilled in order to extract petroleum oil from subterranean reservoirs and bring it to the surface. NMDCO_relaxed.owl ENVO:01001870 biolink:NamedThing gas well A well which has been drilled in order to extract natrual gas from subterranean reservoirs and bring it to the surface. NMDCO_relaxed.owl ENVO:01000004 biolink:NamedThing concentration basin mediterranean sea biome The concentration basin mediterranean sea biome comprises expressions of the mediterranean sea biome that have higher salinity than bordering oceans due to evaporation. Water exchange consists of inflow of the fresher oceanic water in the upper layer and outflow of the saltier mediterranean water in the lower layer of the connecting channel. NMDCO_relaxed.owl ENVO:01000047 biolink:NamedThing mediterranean sea biome The mediterranean sea biome comprises mostly enclosed seas that have limited exchange of deep water with outer oceans and where the water circulation is dominated by salinity and temperature differences rather than winds. NMDCO_relaxed.owl ENVO:01000128 biolink:NamedThing dilution basin mediterranean sea biome The dilution basin mediterranean sea biome comprises expressions of the mediterranean sea biome with lower salinity than the surrounding ocean due to freshwater gains such as rainfall and rivers. Water exchange consists of outflow of the fresher mediterranean water in the upper layer and inflow of the saltier oceanic water in the lower layer of the channel. Renewal of deep water may not be sufficient to supply oxygen to the bottom. NMDCO_relaxed.owl ENVO:01000857 biolink:NamedThing temperate mediterranean sea biome A mediterranean sea biome which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000005 biolink:NamedThing upwelling MERGED DEFINITION: TARGET DEFINITION: An oceanographic feature that involves wind-driven motion of dense, cooler, and usually nutrient-rich water towards the ocean surface, replacing the warmer, usually nutrient-deplete surface water. -------------------- SOURCE DEFINITION: A marine upwelling is a net flow of marine water to the surface of the water column from deeper regions. This is often a result of surface water displacement off continental coasts by wind action. Localised upwellings may also occur along divergent fronts around eddies and along some of the major oceanographic features. Deeper waters often have higher nutrient content; consequently blooms of primary producers, such as planktonic algae, are generally observed around upwelling zones. NMDCO_relaxed.owl ENVO:01000006 biolink:NamedThing coastal upwelling An upwelling that is near a coast. NMDCO_relaxed.owl ENVO:01000020 biolink:NamedThing estuarine biome Expressions of the estuarine biome occur at wide lower courses of a rivers where they flow into a sea. Estuaries experience tidal flows and their water is a changing mixture of fresh and salt. NMDCO_relaxed.owl ENVO:01000022 biolink:NamedThing marine salt marsh biome The marine salt marsh biome comprises marshes that are transitional intertidals between land and salty or brackish marine water (e.g.: sloughs, bays, estuaries). It is dominated by halophytic (salt tolerant) herbaceous plants. The daily tidal surges bring in nutrients, which tend to settle in roots of the plants within the salt marsh. The natural chemical activity of salty (or brackish) water and the tendency of algae to bloom in the shallow unshaded water also allow for great biodiversity. NMDCO_relaxed.owl ENVO:01000023 biolink:NamedThing marine pelagic biome The marine pelagic biome (pelagic meaning open sea) is that of the marine water column, from the surface to the greatest depths. NMDCO_relaxed.owl ENVO:01000024 biolink:NamedThing marine benthic biome The marine benthic biome (benthic meaning 'bottom') encompasses the seafloor and includes such areas as shores, littoral or intertidal areas, marine coral reefs, and the deep seabed. NMDCO_relaxed.owl ENVO:01000045 biolink:NamedThing epeiric sea biome The epeiric sea (also known as an epicontinental sea) biome comprises a shallow seas that extend over part of a continent. Epeiric seas are usually associated with the marine transgressions of the geologic past, which have variously been due to either global eustatic sea level changes, local tectonic deformation, or both, and are occasionally semi-cyclic. NMDCO_relaxed.owl ENVO:01000046 biolink:NamedThing marginal sea biome The marginal sea biome comprises parts of an ocean partially enclosed by land such as islands, archipelagos, or peninsulas. Unlike mediterranean seas, marginal seas have ocean currents caused by ocean winds. Many marginal seas are enclosed by island arcs that were formed from the subduction of one oceanic plate beneath another. NMDCO_relaxed.owl ENVO:01000858 biolink:NamedThing marine upwelling biome A marine biome which contains communities adapted to living in an environment determined by an upwelling process. NMDCO_relaxed.owl ENVO:01000025 biolink:NamedThing marine neritic benthic zone biome The marine neritic zone biome comprises sea floor from the high tide mark to a continental shelf break. This zone generally extends to 200 m below average sea level. NMDCO_relaxed.owl ENVO:01000026 biolink:NamedThing marine bathyal zone biome The marine bathyal zone biome comprises regions of the marine benthic biome between approximately 200 m and 3000 m depth. This zone generally coincides with the continental slope. NMDCO_relaxed.owl ENVO:01000027 biolink:NamedThing marine abyssal zone biome The marine abyssal zone biome comprises regions of the marine benthic biome between approximately 2500 m and 6000 m depth. This zone generally coincides with the continental rise and the abyssal plain. NMDCO_relaxed.owl ENVO:01000028 biolink:NamedThing marine hadal zone biome The marine hadal zone biome describes sea floor deeper than 6000 m such as that of the oceanic trenches. NMDCO_relaxed.owl ENVO:01000029 biolink:NamedThing marine reef biome A biome expressed by strips or ridges of rocks, sand, or coral that rises to or near the surface of a body of marine water. NMDCO_relaxed.owl ENVO:01000030 biolink:NamedThing marine hydrothermal vent biome The marine hydrothermal vent biome comprises regions of the marine benthic biome where heat generated due to tectonic activity, either at divergent plate boundaries or convergent ocean plates where back-arc spreading occurs, is released or 'vented' to the surface. The resultant high temperature water jets are laden with dissolved metals and minerals. NMDCO_relaxed.owl ENVO:01000127 biolink:NamedThing marine cold seep biome A marine benthic biome which is determined by a cold seep. NMDCO_relaxed.owl ENVO:01000032 biolink:NamedThing neritic pelagic zone biome The neritic epipelagic zone biome comprises the marine water column above a continental shelf. NMDCO_relaxed.owl ENVO:01000033 biolink:NamedThing oceanic pelagic zone biome The oceanic epipelagic zone biome comprises the marine water column offshore, beyond a continental shelf. NMDCO_relaxed.owl ENVO:01000034 biolink:NamedThing oceanic sea surface microlayer biome The oceanic sea surface microlayer (SML) biome comprises the top 1000 micrometers of the marine surface waters occurring offshore, away from a continental shelf. It is the boundary layer where all exchange occurs between the atmosphere and the ocean. The chemical, physical, and biological properties of the SML differ greatly from the sub-surface water just a few centimeters beneath. NMDCO_relaxed.owl ENVO:01000035 biolink:NamedThing oceanic epipelagic zone biome The oceanic epipelagic zone biome comprises regions of the marine water column that occur offshore, beyond a continental shelf. This biome extends from the surface of the ocean to a depth of ca. 200-250m. Throughout the zone the light field tends to be asymmetrical vertically, so that the direction and elevation of the sun can still be detected. The oceanic epipelagic zone biome encompasses the euphotic zone and, where and when it occurs, the seasonal thermocline. NMDCO_relaxed.owl ENVO:01000036 biolink:NamedThing oceanic mesopelagic zone biome The oceanic mesopelagic zone biome comprises regions of the marine water column that occur offshore, beyond a continental shelf. This biome extends through the water column from approximately 200-1000 m depth - the maximal depth of light penetration in all but the clearest oligotrophic ocean regions. In comparison to the epipelagic zone, dominant forms of pelagic organisms do not change very much; however, there are marked changes in species composition and the proportion of smaller-sized individuals decreases. NMDCO_relaxed.owl ENVO:01000037 biolink:NamedThing oceanic bathypelagic zone biome The bathypelagic zone biome comprises the marine water column below approximately 1000 m water depth - the maximum depth to which detectable daylight penetrates in all but the clearest oligotrophic waters - and extends to about 2500 - 2700 m water depth. In the temperate Atlantic, the beginning of the bathypelagic zone biome approximates to the deep oxygen minimum and the base of the permanent thermocline. NMDCO_relaxed.owl ENVO:01000038 biolink:NamedThing oceanic abyssopelagic zone biome The abyssopelagic zone biome comprises the marine water column below the bathypelagic zone biome at approximately 2500 -2700 m and extends either to the hadal pelagic zone biome (at approximately 6000 m) or to the benthopelagic zone biome within ca. 100 m of the seafloor. The depth of 2700 m may be critical for physiological reasons as the change in hydrostatic pressure across this depth may preclude organism migration. NMDCO_relaxed.owl ENVO:01000039 biolink:NamedThing oceanic hadal pelagic zone biome The oceanic hadal pelagic zone biome comprises the water column in oceanic trenches occurring at depths between 6000m and 10,000m. NMDCO_relaxed.owl ENVO:01000040 biolink:NamedThing oceanic benthopelagic zone biome The benthopelagic zone biome comprises regions of the marine water column which usually coincide with the benthic boundary layer (BBL) - the layer of isothermal and isohaline water contiguous to the sea floor. A general reversal in the declining gradient of pelagic biomass may be observed here, perhaps explained by viable nutrition on the sea floor being resuspended by bottom currents. This zone typically extends 100 m above the seafloor, but may reach upto1000 m during benthic storms. NMDCO_relaxed.owl ENVO:01000041 biolink:NamedThing neritic sea surface microlayer biome The neritic sea surface microlayer (SML) biome comprises the top 1000 micrometers of marine surface waters occurring above a continental shelf. It is the boundary layer where all exchange occurs between the atmosphere and the ocean. The chemical, physical, and biological properties of the SML differ greatly from the sub-surface water just a few centimeters beneath. NMDCO_relaxed.owl ENVO:01000042 biolink:NamedThing neritic epipelagic zone biome The neritic epipelagic zone biome comprises the marine water column that occurs above a continental shelf and extends from the surface of the ocean to a depth of ca. 200-250m. Throughout the zone the light field tends to be asymmetrical vertically, so that the direction and elevation of the sun can still be detected. The epipelagic zone encompasses the euphotic zone and, where and when it occurs, the seasonal thermocline. NMDCO_relaxed.owl ENVO:01000043 biolink:NamedThing neritic mesopelagic zone biome The neritic mesopelagic zone biome comprises the marine column that occurs above a continental shelf and extends from approximately 200 to 1000 m depth - the maximal depth of light penetration in all but the clearest oligotrophic ocean regions. In comparison to the epipelagic zone, dominant forms of pelagic organisms do not change very much; however, there are marked changes in species composition and the proportion of smaller-sized individuals decreases. NMDCO_relaxed.owl ENVO:01000199 biolink:NamedThing mediterranean forest biome A mediterranean forest in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000208 biolink:NamedThing mediterranean woodland biome A subtropical woodland biome which includes communities adapted to hot to warm, dry summers, mild to cold, rainy winters, and the influence of large, usually marine, bodies of water. NMDCO_relaxed.owl ENVO:01000217 biolink:NamedThing mediterranean shrubland biome A mediterranean shrubland biome is a subtropical shrubland biome which includes communities adapted to hot to warm, dry summers, mild to cold, rainy winters, and the influence of large, usually marine, bodies of water. NMDCO_relaxed.owl ENVO:01000224 biolink:NamedThing mediterranean grassland biome A subtropical grassland biome which includes communities adapted to hot to warm, dry summers, mild to cold, rainy winters, and the influence of large, usually marine, bodies of water. NMDCO_relaxed.owl ENVO:01000229 biolink:NamedThing mediterranean savanna biome A savanna biome which is subject to mediterranean climate patterns. NMDCO_relaxed.owl ENVO:01000049 biolink:NamedThing marine coral reef biome The marine coral reef biome comprises constructional wave-resistant entities which are primarily built by corals and are often cemented together. The growth of these structures is aided by zooxanthellae, algae that are symbiotic with the reef-building corals. NMDCO_relaxed.owl ENVO:01000050 biolink:NamedThing marine subtidal rocky reef biome The marine rocky subtidal reef biome comprises regions of the marine reef biome composed mainly of rock and which harbour abundant communities of algae and invertebrates. These reefs are often very patchy, with alterations of rocks dominated by rich invertebrate assemblages and turf-forming calcareous red algae. NMDCO_relaxed.owl ENVO:01000123 biolink:NamedThing marine sponge reef biome The marine sponge reef biome comprises marine reefs primarily built by marine sponges. The primary frame-building sponges are all members of the order Hexactinosa. They are found only in glacier-scoured troughs of low-angle continental shelf. The seafloor is stable and consists of rock, coarse gravel, and large boulders. NMDCO_relaxed.owl ENVO:01000051 biolink:NamedThing marine black smoker biome A marine black smoker biome comprises regions of the marine hydrothermal vent biome characterised by a black vent plume. This black plume is a consequence of dissolved metals and minerals forming complexes with sulphide and indicates polymetallic sulphide mineral deposits beneath the surface. NMDCO_relaxed.owl ENVO:01000052 biolink:NamedThing marine white smoker biome A marine white smoker biome comprises regions of the marine hydrothermal vent biome characterised by lightly hued plumes, typically containing barium, calcium, and silicon. These vents tend to have lower temperature plumes when compared to black smoker environments. NMDCO_relaxed.owl ENVO:01000053 biolink:NamedThing marine ultramafic hydrothermal vent biome A marine ultramafic hydrothermal vent biome comprises regions of themarine hydrothermal vent biome hosted on ultramafic (also referred to as ultrabasic) rocks. Ultramafic rocks are igneous and meta-igneous rocks with very low silica content (less than 45%), generally >18% MgO, high FeO, low potassium, and are composed of usually greater than 90% mafic minerals (dark colored, high magnesium and iron content). The Earth's mantle is composed of ultramafic rocks. NMDCO_relaxed.owl ENVO:01000054 biolink:NamedThing marine basaltic hydrothermal vent biome A marine basaltic hydrothermal vent biome comprises regions of the marine hydrothermal vent biome hosted on basaltic rocks. Basalt generally has a composition of 45 to 55 wt % SiO2, 2 to 6 wt % total alkalis, 0.5 to 2.0 wt % TiO2, 5 to 14 wt % FeO and 14 wt % or more Al2O3. Contents of CaO are commonly near 10 wt %, those of MgO commonly in the range 5 to 12 wt %. NMDCO_relaxed.owl ENVO:01000057 biolink:NamedThing marine algal bloom A marine algal bloom is a rapid increase or accumulation in the population of algae in a marine system. Typically, only one or a small number of phytoplankton species are involved. Although there is no officially recognized threshold level, algae can be considered to be blooming at concentrations of hundreds to thousands of cells per milliliter, depending on the severity. NMDCO_relaxed.owl ENVO:2000005 biolink:NamedThing freshwater algal bloom An algal bloom that is located in freshwater. Freshwater algal blooms are the result of an excess of nutrients, particularly some phosphates. NMDCO_relaxed.owl ENVO:01000073 biolink:NamedThing marine oligotrophic desert A marine water mass which is composed primarily of water with low concentrations of nutrients. NMDCO_relaxed.owl ENVO:01000108 biolink:NamedThing marine cold-water sphere The marine cold-water sphere describes a water mass extending from the polar seas and across low latitudes at depths of ca. 800 to 1000 m, which is separated from the marine warm-water sphere by the permanent marine thermocline NMDCO_relaxed.owl ENVO:01000109 biolink:NamedThing marine warm-water sphere The marine warm-water sphere describes a water mass extending to depths of ca. 800 to 1000 m in low and middle latitudes. It is separated from the marine cold-water sphere by the permanent marine thermocline NMDCO_relaxed.owl ENVO:01000072 biolink:NamedThing marine Taylor column A marine Taylor column is a Taylor column that is formed in a marine body of water. Currents flowing over shoaling topography such as seamounts are accelerated and destabilised, resulting in Taylor columns. Eddies and internal waves are generated downstream of the topological feature and may extend 1000 m or so above them. This may result in a localised increase in primary production where the Taylor column reaches surface waters. NMDCO_relaxed.owl ENVO:01000299 biolink:NamedThing Taylor column A Taylor column is a column of deflected fluid flow which is formed in a perturbed, rotating fluid, is parallel to the axis of rotation, and extends above the obstacle perturbing the fluid in a rigid manner. NMDCO_relaxed.owl ENVO:01000300 biolink:NamedThing atmospheric Taylor column An atmospheric Taylor column is a Taylor column that is formed in the atmosphere. Atmospheric Taylor columns often form above islands resulting in vortex streets in the atmosphere. NMDCO_relaxed.owl ENVO:01000076 biolink:NamedThing marine chemocline A marine chemocline is a marine cline caused by a strong, vertical chemistry gradient within a body of marine water. Chemoclines most commonly occur where local conditions favor the formations of anoxic bottom water. NMDCO_relaxed.owl ENVO:01000078 biolink:NamedThing marine nutricline A nutricline which is part of a marine water body. NMDCO_relaxed.owl ENVO:01001313 biolink:NamedThing estuarine coastal pycnocline A pycnocline which is part of an estuarine water body, spanning from the shore to a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters. NMDCO_relaxed.owl ENVO:01001323 biolink:NamedThing estuarine open water pycnocline A pycnocline which is part of an estuarine water body, spanning from a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters until the end of the estuary most distal from the coast. NMDCO_relaxed.owl ENVO:01000079 biolink:NamedThing marine lysocline The marine lysocline denotes the depth in the ocean below which the rate of dissolution of calcite increases dramatically. As water column depth and therefore pressure increases, the corresponding calcite saturation of seawater decreases and the calcite begins dissolve. NMDCO_relaxed.owl ENVO:01001696 biolink:NamedThing isothermal surface A material isosurface within which temperature is approximately constant. NMDCO_relaxed.owl ENVO:01001694 biolink:NamedThing isohaline surface A material isosurface within which salinity is approximately constant. NMDCO_relaxed.owl ENVO:01001695 biolink:NamedThing isopycnal surface A material isosurface within which density is approximately constant. NMDCO_relaxed.owl ENVO:01000084 biolink:NamedThing estuarine front NMDCO_relaxed.owl ENVO:01000085 biolink:NamedThing plume front NMDCO_relaxed.owl ENVO:01000086 biolink:NamedThing coastal buoyancy current front NMDCO_relaxed.owl ENVO:01000087 biolink:NamedThing tidal mixing front NMDCO_relaxed.owl ENVO:01000088 biolink:NamedThing mid-shelf fronts NMDCO_relaxed.owl ENVO:01000089 biolink:NamedThing shelf-slope/shelf-break front NMDCO_relaxed.owl ENVO:01000090 biolink:NamedThing coastal upwelling front NMDCO_relaxed.owl ENVO:01000091 biolink:NamedThing topographic upwelling front NMDCO_relaxed.owl ENVO:01000092 biolink:NamedThing equatorial upwelling front NMDCO_relaxed.owl ENVO:01000093 biolink:NamedThing boundary current front NMDCO_relaxed.owl ENVO:01000094 biolink:NamedThing subtropical convergence front A convergence front which is located in a region subject to subtropical climate patterns. NMDCO_relaxed.owl ENVO:01000095 biolink:NamedThing marginal ice zone front NMDCO_relaxed.owl ENVO:01000096 biolink:NamedThing water mass front NMDCO_relaxed.owl ENVO:01000097 biolink:NamedThing surface convergence NMDCO_relaxed.owl ENVO:03600070 biolink:NamedThing river plume An oceanic front in which mixing of river discharge and saline seawater occurs. NMDCO_relaxed.owl ENVO:01000100 biolink:NamedThing along-front current A marine surface current that flows along an oceanic front. NMDCO_relaxed.owl ENVO:01000101 biolink:NamedThing warm surface current NMDCO_relaxed.owl ENVO:01000102 biolink:NamedThing cold surface current NMDCO_relaxed.owl ENVO:01000103 biolink:NamedThing western boundary current A warm water, narrow marine surface current flowing from the equator to high latitudes at speeds between 40 and 120 kilometers per day. Western boundary currents are the deepest ocean surface flows, usually extending 1000 meters below the ocean surface. NMDCO_relaxed.owl ENVO:01000104 biolink:NamedThing eastern boundary current A cold water, broad marine surface current flowing from high latitudes to the equator at speeds between 3 and 7 kilometers per day. NMDCO_relaxed.owl ENVO:01000106 biolink:NamedThing permanent marine thermocline A marine thermocline which separates the marine cold-water sphere from the marine warm-water sphere and which does not dissipate seasonally. NMDCO_relaxed.owl ENVO:01000107 biolink:NamedThing seasonal marine thermocline A marine thermocline which is present below the marine wind mixed layer. NMDCO_relaxed.owl ENVO:01000112 biolink:NamedThing polymetallic nodule Polymetallic nodules, also called manganese nodules, are rock concretions on the sea bottom formed of concentric layers of iron and manganese hydroxides around a core. Nodules vary in size from tiny particles visible only under a microscope to large pellets more than 20 centimetres (8 in) across. However, most nodules are between 5 and 10 cm in diameter. NMDCO_relaxed.owl ENVO:01000125 biolink:NamedThing marine littoral zone The marine littoral zone is a littoral zone which extends, approximately, from the spray region above the high tide mark to the edge of the coninental shelf. NMDCO_relaxed.owl ENVO:01000409 biolink:NamedThing freshwater littoral zone A freshwater littoral zone is a littoral zone which extends offshore from the shore of a freshwater body of water to the limit of occupancy of rooted plants. NMDCO_relaxed.owl ENVO:01000129 biolink:NamedThing marine hydrothermal vent chimney A column of solid material which has been progressively deposited around a hydrothermal vent. NMDCO_relaxed.owl ENVO:01000138 biolink:NamedThing plant matter fall A accumulation of plant matter that has fallen to the bottom of a body of water. NMDCO_relaxed.owl ENVO:01000139 biolink:NamedThing animal carcass fall The carcass of an animal that has fallen to the bottom of a body of water. NMDCO_relaxed.owl ENVO:01000140 biolink:NamedThing whale fall Whale fall is the term used for a whale carcass that has fallen to the ocean floor. When a whale dies in shallow water, its carcass is typically devoured by scavengers over a relatively short period of time: within several months. However, in deeper water (depths of 2,000 m/6,600 ft or greater), fewer scavenger species exist, and the carcass can provide sustenance for a complex localized ecosystem over periods of decades. NMDCO_relaxed.owl ENVO:01000141 biolink:NamedThing seal fall Seal fall is the term used for a seal carcass that has fallen to the ocean floor. NMDCO_relaxed.owl ENVO:01000142 biolink:NamedThing wood fall A wood fall describes an accumulation of woody plant material that has fallen to the ocean floor. NMDCO_relaxed.owl ENVO:01000158 biolink:NamedThing marine snow Marine snow is a continuous shower of mostly organic detritus falling from the upper layers of the water column. Its origin lies in activities within the productive photic zone. NMDCO_relaxed.owl ENVO:01000163 biolink:NamedThing photophore A photophore is a light-emitting organ which appears as luminous spots on various marine animals, including fish and cephalopods. The organ can be simple, or as complex as the human eye; equipped with lenses, shutters, color filters and reflectors. The light can be produced from compounds during the digestion of prey, from specialized mitochondrial cells in the organism, called photocytes ("light producing" cells) , or, similarly, associated with symbiotic bacteria in the organism. NMDCO_relaxed.owl ENVO:01000164 biolink:NamedThing root nodule Root nodules occur on the roots of plants that associate with symbiotic nitrogen-fixing bacteria. NMDCO_relaxed.owl ENVO:01000165 biolink:NamedThing trophosome A specialised organ found in deep-sea tube worms populating hydrothermal vent environments that is colonised by chemosynthetic bacteria which supply the host worm with organic compounds. The term may be applied to similar organs in other worms. NMDCO_relaxed.owl ENVO:01000166 biolink:NamedThing mycetome A specialized organ that is linked to the gut in beetles and host to a symbiotic yeast. The yeast cells assist in the digestion of less nutritious foods, supply needed B-vitamins and sterols, and provide resistance to certain toxins. NMDCO_relaxed.owl ENVO:01000167 biolink:NamedThing determinate root nodule Determinate nodules are root nodules found on tropical (sub)legumes, such as those of the genera Glycine (soybean), Phaseolus (common bean), Lotus, and Vigna. Determinate nodules lose meristematic activity shortly after initiation, thus growth is due to cell expansion resulting in mature nodules which are spherical in shape. NMDCO_relaxed.owl ENVO:01000168 biolink:NamedThing indeterminate root nodule Indeterminate nodules are found on temperate legumes like Pisum (pea), Medicago (alfalfa), Trifolium (clover), and Vicia (vetch). They earned the moniker "indeterminate" because they maintain an active apical meristem that produces new cells for growth over the life of the nodule. Because they are actively growing, indeterminate nodules manifest zones which demarcate different stages of development/symbiosis. NMDCO_relaxed.owl ENVO:01000169 biolink:NamedThing indeterminate root nodule active meristem A part of an indeterminate root nodule where new nodule tissue is formed which will later differentiate into the other zones of the nodule. NMDCO_relaxed.owl ENVO:01000170 biolink:NamedThing indeterminate root nodule infection zone A part of an indeterminate root nodule permeated with infection threads full of bacteria. The plant cells are larger than in the previous zone and cell division is halted. NMDCO_relaxed.owl ENVO:01000171 biolink:NamedThing indeterminate root nodule nitrogen fixation zone A part of an indeterminate root nodule where each cell contains a large, central vacuole and the cytoplasm is filled with fully differentiated bacteroids which are actively fixing nitrogen. Typically, the plant provides these cells with leghemoglobin, resulting in a distinct pink color. NMDCO_relaxed.owl ENVO:01000172 biolink:NamedThing indeterminate root nodule senescent zone A part of an indeterminate root nodule where plant cells and their bacteroid contents are being degraded. The breakdown of the heme component of leghemoglobin results in a visible greening at the base of the nodule. NMDCO_relaxed.owl ENVO:01000175 biolink:NamedThing woodland biome A woodland biome is a terrestrial biome which includes, across its entire spatial extent, woody plants spaced sufficiently far apart to allow light penetration to support communities of herbaceous plants or shrubs living closer to the woodland floor. NMDCO_relaxed.owl ENVO:01000176 biolink:NamedThing shrubland biome A shrubland biome is a terrestrial biome which includes, across its entire spatial extent, dense groups of shrubs. NMDCO_relaxed.owl ENVO:01000180 biolink:NamedThing tundra biome A tundra ecosystem which is undergoing climactic ecological succession. NMDCO_relaxed.owl ENVO:01000181 biolink:NamedThing mangrove biome A mangrove biome is a terrestrial biome which includes, across its spatial extent, mangrove plants (Rhizophoraceae). Mangrove plants are able to withstand high levels of salinity as well as regions of anoxia and frequent tidal inundation. Mangrove biomes often occur near tropical and sub-tropical estuaries and depositional marine coastal environments where fine sediments (often with high organic content) collect in areas protected from high energy wave action. NMDCO_relaxed.owl ENVO:01000178 biolink:NamedThing savanna biome A woodland biome which has seasonal water availability and includes trees spaced sufficiently far apart to allow an unbroken layer of grass, sedge (Cyperaceae) or rush (Juncaceae) communities to live. NMDCO_relaxed.owl ENVO:01000220 biolink:NamedThing tropical woodland biome A woodland biome which is subject to tropical climate patterns. NMDCO_relaxed.owl ENVO:01000221 biolink:NamedThing temperate woodland biome A woodland biome which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000222 biolink:NamedThing subtropical woodland biome A woodland biome which is subject to subtropical climate patterns. NMDCO_relaxed.owl ENVO:01001371 biolink:NamedThing alpine tundra ecosystem A tundra ecosystem which exists at high altitudes and where vegetation is stunted due to low temperatures and high winds. NMDCO_relaxed.owl ENVO:01001625 biolink:NamedThing polar tundra ecosystem A tundra ecosystem which is subject to polar climatic conditions. NMDCO_relaxed.owl ENVO:01000182 biolink:NamedThing temperate desert biome A temperate desert biome is a desert biome which has communities adapted to intermediate insolation, low rainfall, and large temperature variations between winter and summer. Winter temperatures may fall below 0 degrees Celsius. Some precipitation in this biome may fall as snow. NMDCO_relaxed.owl ENVO:01000183 biolink:NamedThing tropical desert biome A tropical desert biome is a desert biome which has communities adapted to temperatures above a monthly average of 18 degrees Celsius, high daily temperature ranges of approximately 20 degrees Celsius, very high insolation due to inhibited cloud formation, and very low precipitation. Tropical desert biomes located near coasts with cold upwellings may have cooler temperatures and reduced insolution due to fog. NMDCO_relaxed.owl ENVO:01000184 biolink:NamedThing subtropical desert biome A subtropical desert biome is a desert biome which has communities adapted to temperatures above a monthly average of 18 degrees Celsius, high daily temperature ranges of approximately 20 degrees Celsius, high insolation (but lower than that of a tropical desert biome), inhibited cloud formation, and very low precipitation. Subtropical desert biomes located near coasts with cold upwellings may have cooler temperatures and reduced insolution due to fog. NMDCO_relaxed.owl ENVO:01000185 biolink:NamedThing montane desert biome A montane desert biome is a desert biome which occurs in regions elevated above sea level and which has community structure determined by elevation-dependent environmental conditions. NMDCO_relaxed.owl ENVO:01000186 biolink:NamedThing polar desert biome A polar desert biome is a desert biome which is subject to low levels of insolation, annual precipitation less than 250 millimeters, and a mean temperature less than 10 degrees Celsius during its warmest month. Temperature changes in polar deserts frequently cross the freezing point of water. NMDCO_relaxed.owl ENVO:01000189 biolink:NamedThing temperate savanna biome A savanna biome which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000193 biolink:NamedThing temperate grassland biome NMDCO_relaxed.owl ENVO:01000202 biolink:NamedThing temperate broadleaf forest biome A broadleaf forest which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000211 biolink:NamedThing temperate coniferous forest biome A coniferous forest biome which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000212 biolink:NamedThing temperate mixed forest biome A temperate mixed forest in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000215 biolink:NamedThing temperate shrubland biome A shrubland biome which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000856 biolink:NamedThing temperate marginal sea biome A marginal sea biome which is located in a region with a temperate climate. NMDCO_relaxed.owl ENVO:01000860 biolink:NamedThing temperate marine upwelling biome A marine upwelling biome which is located in a region subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000188 biolink:NamedThing tropical savanna biome A savanna biome which is subject to tropical climate patterns. NMDCO_relaxed.owl ENVO:01000192 biolink:NamedThing tropical grassland biome NMDCO_relaxed.owl ENVO:01000200 biolink:NamedThing tropical broadleaf forest biome A tropical broadleaf forest in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000210 biolink:NamedThing tropical coniferous forest biome A coniferous forest biome which is subject to tropical climate patterns. NMDCO_relaxed.owl ENVO:01000214 biolink:NamedThing tropical shrubland biome A shrubland biome which is subject to tropical climate patterns. NMDCO_relaxed.owl ENVO:01000854 biolink:NamedThing tropical marine coral reef biome A marine coral reef biome which is located in a region with a tropical climate. NMDCO_relaxed.owl ENVO:01000859 biolink:NamedThing tropical marine upwelling biome A marine upwelling biome which is subject to tropical climate patterns. NMDCO_relaxed.owl ENVO:01001230 biolink:NamedThing tropical marginal sea biome A marginal sea biome which is located in a region with a tropical climate. NMDCO_relaxed.owl ENVO:01001798 biolink:NamedThing tropical mixed forest biome A tropical mixed forest in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000187 biolink:NamedThing subtropical savanna biome A savanna biome which is subject to subtropical climate patterns. NMDCO_relaxed.owl ENVO:01000191 biolink:NamedThing subtropical grassland biome A subtropical grassland in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000201 biolink:NamedThing subtropical broadleaf forest biome A subtropical broadleaf forest in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000209 biolink:NamedThing subtropical coniferous forest biome A coniferous forest biome which is subject to subtropical climate patterns. NMDCO_relaxed.owl ENVO:01000213 biolink:NamedThing subtropical shrubland biome A shrubland biome which is subject to subtropical climate patterns. NMDCO_relaxed.owl ENVO:01000194 biolink:NamedThing montane grassland biome A montane grassland biome is a grassland biome which occurs in regions elevated above sea level and which has community structure determined by elevation-dependent environmental conditions. NMDCO_relaxed.owl ENVO:01000216 biolink:NamedThing montane shrubland biome A montane shrubland biome is a shrubland biome which occurs in regions elevated above sea level and which has community structure determined by elevation-dependent environmental conditions. NMDCO_relaxed.owl ENVO:01000223 biolink:NamedThing montane savanna biome A montane savanna biome is a savanna biome which occurs in regions elevated above sea level and which has community structure determined by elevation-dependent environmental conditions. NMDCO_relaxed.owl ENVO:01000190 biolink:NamedThing flooded savanna biome A flooded savanna biome is a savanna biome which has very wet to saturated soil moisture content. NMDCO_relaxed.owl ENVO:01000195 biolink:NamedThing flooded grassland biome NMDCO_relaxed.owl ENVO:01001810 biolink:NamedThing mediterranean grassland A grassland which is subject to mediterranean climatic conditions. NMDCO_relaxed.owl ENVO:01000196 biolink:NamedThing coniferous forest biome A coniferous forest biome is a forest biome which contains densely packed populations or communities of coniferous trees, strongly limiting light penetration to the forest floor. NMDCO_relaxed.owl ENVO:01000197 biolink:NamedThing broadleaf forest biome A broadleaf forest ecosystem which is undergoing climactic ecological succession. NMDCO_relaxed.owl ENVO:01000198 biolink:NamedThing mixed forest biome A mixed forest in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000383 biolink:NamedThing temperate evergreen needleleaf forest An evergreen needleleaf forest which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000386 biolink:NamedThing temperate deciduous needleleaf forest A deciduous needleleaf forest which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000399 biolink:NamedThing tropical needleleaf forest A needleleaf forest which is subject to tropical climate patterns. NMDCO_relaxed.owl ENVO:01001792 biolink:NamedThing tropical broadleaf forest A broadleaf forest which is subject to tropical climate conditions. NMDCO_relaxed.owl ENVO:01001793 biolink:NamedThing subtropical broadleaf forest A broadleaf forest which is subject to subtropical climate conditions. NMDCO_relaxed.owl ENVO:01001794 biolink:NamedThing temperate broadleaf forest A broadleaf forest which is subject to temperate climate conditions. NMDCO_relaxed.owl ENVO:01001796 biolink:NamedThing temperate mixed forest A mixed forest which is subject to temperate climatic conditions. NMDCO_relaxed.owl ENVO:01001797 biolink:NamedThing tropical mixed forest A mixed forest which is subject to tropical climatic conditions. NMDCO_relaxed.owl ENVO:01001791 biolink:NamedThing mediterranean forest A forest ecosystem which includes communities adapted to 1) hot to warm, dry summers, 2) mild to cold, rainy winters, and 3) the influence of large, usually marine, bodies of water. NMDCO_relaxed.owl ENVO:01000385 biolink:NamedThing temperate deciduous broadleaf forest A deciduous broadleaf forest which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000387 biolink:NamedThing tropical deciduous broadleaf forest A deciduous broadleaf forest which is subject to tropical climate patterns. NMDCO_relaxed.owl ENVO:01000388 biolink:NamedThing tropical semi-deciduous broadleaf forest A semi-deciduous broadleaf forest which is subject to tropical climate patterns. NMDCO_relaxed.owl ENVO:01001799 biolink:NamedThing tropical dry broadleaf forest A tropical broadleaf forest which 1) s subject to a year-round warm climate 2) may receive several hundred centimeters or rain per year and 3) are subject to long dry seasons which last several months. NMDCO_relaxed.owl ENVO:01001800 biolink:NamedThing tropical moist broadleaf forest A tropical broadleaf forest which 1) has low variability in annual temperature, 2) high levels of rainfall (>200 centimeter annually), and 3) has tree communities dominated by semi-evergreen and evergreen species. NMDCO_relaxed.owl ENVO:01001801 biolink:NamedThing subtropical dry broadleaf forest A subtropical broadleaf forest which 1) s subject to a year-round warm climate 2) may receive several hundred centimeters or rain per year and 3) are subject to long dry seasons which last several months. NMDCO_relaxed.owl ENVO:01001802 biolink:NamedThing subtropical moist broadleaf forest A subtropical broadleaf forest which 1) has low variability in annual temperature, 2) high levels of rainfall (>200 centimeter annually), and 3) has tree communities dominated by semi-evergreen and evergreen species. NMDCO_relaxed.owl ENVO:01000397 biolink:NamedThing temperate broadleaf evergreen forest A broadleaf evergreen forest which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000203 biolink:NamedThing environmental condition An environmental condition is a range of a determinate quality or combination of qualities that are present in an environmental system. NMDCO_relaxed.owl PATO:0001018 biolink:NamedThing physical quality A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities. NMDCO_relaxed.owl ENVO:01001374 biolink:NamedThing sea state A physical quality which inheres in a marine water body by virtue of the height, wavelength, period, and directional energy flux of its waves which evolve into swell through nonlinear dynamics. NMDCO_relaxed.owl ENVO:01001667 biolink:NamedThing thalassic A physical quality inhering in a bearer by virtue of the bearer being derived from, part of, or otherwise dependent on the seas or oceans. NMDCO_relaxed.owl ENVO:06105019 biolink:NamedThing quality of a foam A physical quality which inheres in a liquid or solid bearer by virtue of that bearer trapping a gas in a colloidal suspension throughout its volume. NMDCO_relaxed.owl ENVO:06105240 biolink:NamedThing cation exchange capacity A physical quality which inheres in an environmental material by virtue of the material's ability to adsorb exchangeable cations. NMDCO_relaxed.owl PATO:0000039 biolink:NamedThing direction A physical quality inhering in a bearer by virtue of the bearer's orientation in space. NMDCO_relaxed.owl PATO:0000058 biolink:NamedThing odor A physical quality inhering in a bearer by virtue of the bearer's molecules being are aerially dispersed and perceived by an odorant receptor. NMDCO_relaxed.owl PATO:0000125 biolink:NamedThing mass A physical quality that inheres in a bearer by virtue of the proportion of the bearer's amount of matter. NMDCO_relaxed.owl PATO:0000140 biolink:NamedThing position A spatial quality inhering in a bearer by virtue of the bearer's spatial location relative to other objects in the vicinity. NMDCO_relaxed.owl PATO:0000146 biolink:NamedThing temperature A physical quality of the thermal energy of a system. NMDCO_relaxed.owl PATO:0000165 biolink:NamedThing time A quality in which events occur in sequence. NMDCO_relaxed.owl PATO:0001019 biolink:NamedThing mass density A physical quality which inheres in a bearer by virtue of some influence is exerted by the bearer's mass per unit size. NMDCO_relaxed.owl PATO:0001025 biolink:NamedThing pressure A physical quality that inheres in a bearer by virtue of the bearer's amount of force per unit area it exerts. NMDCO_relaxed.owl PATO:0001029 biolink:NamedThing efficiency A physical quality inhering in a bearer by virtue of ratio of the bearer's output to the bearer's input. NMDCO_relaxed.owl PATO:0001031 biolink:NamedThing elasticity A physical quality inhering in a bearer by virtue of the bearer's disposition to recover its size and shape after deformation in any way. NMDCO_relaxed.owl PATO:0001230 biolink:NamedThing strength A quality inhering in a bearer by virtue of the bearer's power or force. NMDCO_relaxed.owl PATO:0001420 biolink:NamedThing buoyancy A physical quality inhering in a bearer by virtue of the bearer's disposition to rise or float in a fluid medium such as water or air. NMDCO_relaxed.owl PATO:0001579 biolink:NamedThing contractility A physical quality that is the ability to contract or shrink. NMDCO_relaxed.owl PATO:0001585 biolink:NamedThing conductivity A physical quality inhering in a bearer by virtue of the bearer's disposition to transmit of an entity through a medium. NMDCO_relaxed.owl PATO:0001598 biolink:NamedThing protruding A quality inhering in a bearer by virtue of the bearer's extending out above or beyond a surface or boundary. NMDCO_relaxed.owl PATO:0001682 biolink:NamedThing magnetism A physical quality inhering in a bearer by virtue of the bearer's disposition to exert an attractive or repulsive force on other entities. NMDCO_relaxed.owl PATO:0001739 biolink:NamedThing radiation quality A quality that inheres in an bearer by virtue of how that bearer interacts with radiation. NMDCO_relaxed.owl PATO:0001822 biolink:NamedThing wetness A quality inhering in a bearer by virtue of whether the bearer's being covered by a liquid. NMDCO_relaxed.owl PATO:0001884 biolink:NamedThing hydrophobicity A physical quality inhering in a bearer by virtue the bearer's disposition to being water-repellent; tending to repel and not absorb water. NMDCO_relaxed.owl PATO:0001886 biolink:NamedThing hydrophilicity A physical quality inhering in a bearer by virtue the bearer's disposition to having an affinity for water; it is readily absorbing or dissolving in water. NMDCO_relaxed.owl PATO:0001906 biolink:NamedThing movement quality A physical quality inhering in a bearer by virtue of the bearer's participation in movement. NMDCO_relaxed.owl PATO:0002138 biolink:NamedThing edibility A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be eaten. NMDCO_relaxed.owl PATO:0002198 biolink:NamedThing quality of a substance A quality inhering in a bearer by virtue of its constitution. NMDCO_relaxed.owl PATO:0015021 biolink:NamedThing combustibility The propensity of a material to undergo combustion. Combustion encompasses smouldering and flaming combustion. Combustibility is usually applied to solids. NMDCO_relaxed.owl ENVO:01000204 biolink:NamedThing tropical A tropical condition is an environmental condition in which an environmental system receives high yearly solar irradiance per unit area and, on Earth, the Sun reaches a subsolar point at least once during the solar year. This results in a hot and moist year-round climate at low elevations, which have a monthly average temperature above 18 degrees Celsius. NMDCO_relaxed.owl ENVO:01000205 biolink:NamedThing subtropical A subtropical condition is an environmental condition in which an envrionmental system receives more solar irradiance than those with temperate conditions, but less than those with tropical conditions. At low elevations, this typically results in eight months of the year having average temperatures greater than or equal to 10 degrees Celsius with the coldest monthly temperature averaging between 2 and 13 degrees Celsius. NMDCO_relaxed.owl ENVO:01000206 biolink:NamedThing temperate A temperate condition is an environmental condition in which an environmental system receives less solar irradiance than those with subpolar conditions, but greater than those with subtropical conditions. NMDCO_relaxed.owl ENVO:01000230 biolink:NamedThing arid An environmental condition in which annual precipitation is less than half of annual potential evapotranspiration. NMDCO_relaxed.owl ENVO:01000238 biolink:NamedThing polar A polar condition is an environmental condition in which an environmental system receives low, yearly solar irradiance per unit area, resulting in colder climatic conditions. NMDCO_relaxed.owl ENVO:01000251 biolink:NamedThing subpolar A subpolar condition is an environmental condition in which an environmental system receives low, yearly solar irradiance per unit area and is surrounded by large land masses. This results in very cold winters with temperatures potentially falling to around -40 degrees Celsius and summers which last no more than 3 months of the year with a 24-hour average temperature of at least 10 degrees Celsius. NMDCO_relaxed.owl ENVO:01000343 biolink:NamedThing altitudinal condition An altitudinal condition is an environmental condition in which ranges of factors such as temperature, humidity, soil composition, solar irradiation, and tree density vary with ranges in altitude. NMDCO_relaxed.owl ENVO:01000370 biolink:NamedThing tundra climatic condition An tundra climatic condition is a polar condition in which at least one month's average temperature exceeds 0 degrees Celsius. NMDCO_relaxed.owl ENVO:01001081 biolink:NamedThing environmental variability A condition which inheres in an environmental system by virtue of that system undergoing variation in its composition, the distribution of the qualities its components bear, and/or in the processes which occur within it and which it participates in. NMDCO_relaxed.owl ENVO:01001184 biolink:NamedThing arable A quality inhereing in a bearer by virtue of the bearer being periodically and mechanically manipulated to loosen and mix any soil which it has as a part. NMDCO_relaxed.owl ENVO:01000207 biolink:NamedThing mediterranean A mediterranean condition is a subtropical condition in which hot dry summers and winters with moderate to high rainfall. NMDCO_relaxed.owl ENVO:01000377 biolink:NamedThing humid subtropical A humid subtropical condition is a subtropical condition in which an environmental system has hot, humid summers, warm to cool dry winters, and average annual precipitation either evenly distributed throughout the year or marked by a dry season or drying trend during winter NMDCO_relaxed.owl ENVO:01000378 biolink:NamedThing arid subtropical An arid subtropical condition is a subtropical condition in which an environmental system has an annual average temperature near 18.2 degrees Celsius with their coldest month averaging between 2 and 13 degrees Celsius, the absence of regular rainfall, and high humidity. NMDCO_relaxed.owl ENVO:01000379 biolink:NamedThing highland subtropical A highland subtropical condition is a subtropical condition in which increased elevation results in mild summers, cooler winters, and, in some instances, snowfall associated with montly temperature averages below 22 but above -3 degrees Celsius. NMDCO_relaxed.owl ENVO:01000250 biolink:NamedThing subpolar coniferous forest biome A coniferous forest biome which includes communities adapted to subpolar conditions. NMDCO_relaxed.owl ENVO:01000395 biolink:NamedThing temperate sclerophyllous dry forest A sclerophyllous forest which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000398 biolink:NamedThing temperate freshwater swamp forest A freshwater swamp forest which is subject to temperate climate patterns. NMDCO_relaxed.owl ENVO:01000389 biolink:NamedThing temperate mixed broadleaf forest A temperate mixed forest which has communities of trees composed primarily of species with broad leaves. NMDCO_relaxed.owl ENVO:01000390 biolink:NamedThing temperate mixed needleleaf forest A temperate mixed forest which has communities of trees composed primarily of species with needle-like leaves (e.g. conifers). NMDCO_relaxed.owl ENVO:01000218 biolink:NamedThing xeric shrubland biome NMDCO_relaxed.owl ENVO:01001369 biolink:NamedThing tidal mangrove shrubland A shrubland biome which is densely vegetated by dwarf or short mangroves (and associates) that are generally less than 6 meters in height, is tidally influenced, is located in tropical or subtropical areas. NMDCO_relaxed.owl ENVO:01000225 biolink:NamedThing subtropical dry broadleaf forest biome A subtropical dry broadleaf forest in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000226 biolink:NamedThing subtropical moist broadleaf forest biome A subtropical moist broadleaf forest in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000227 biolink:NamedThing tropical dry broadleaf forest biome A tropical dry broadleaf forest in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000228 biolink:NamedThing tropical moist broadleaf forest biome A tropical moist broadleaf forest in which dominant ecological communities have reached their climax successional state. NMDCO_relaxed.owl ENVO:01000384 biolink:NamedThing tropical lowland evergreen broadleaf rain forest A broadleaf forest which is subject to tropical climate patterns with high rainfall, is located in a lowland area, and is dominated by plants which retain their leaves throughout the year. NMDCO_relaxed.owl ENVO:01000391 biolink:NamedThing tropical semi-evergreen moist broadleaf forest NMDCO_relaxed.owl ENVO:01000231 biolink:NamedThing lava Lava is a mixture of molten or semi-molten rock, volatiles, and solids which has extruded beyond a planetary crust. NMDCO_relaxed.owl ENVO:01000648 biolink:NamedThing magma Magma is a mixture of molten or semi-molten rock, volatiles, and solids that is found beneath the uppermost solid layer of a planetary body. Besides molten rock, magma may also contain suspended crystals, dissolved gas and sometimes gas bubbles. NMDCO_relaxed.owl ENVO:01000798 biolink:NamedThing plasma A material entity which is composed of a volume of unbound positive and negative particles in roughly equal numbers, conducts electricity, and possesses internal magnetic fields. NMDCO_relaxed.owl ENVO:01001088 biolink:NamedThing aerosolised liquids An aerosol which has non-gaseous parts that are primarily composed of liquid droplets. NMDCO_relaxed.owl ENVO:01001511 biolink:NamedThing freshwater ice NMDCO_relaxed.owl ENVO:03600007 biolink:NamedThing formation fluid A fluid environmental material which is contained in geologic formations naturally. NMDCO_relaxed.owl ENVO:03600082 biolink:NamedThing crustal fluid Fluid environmental material which is present in the continental crust and dictates the nature and extent of crustal deformation. NMDCO_relaxed.owl ENVO:01000232 biolink:NamedThing felsic lava Felsic lava is lava which is high in silica (> 69 percent by weight), aluminium, potassium, sodium, and calcium, forming a polymerized liquid rich in feldspar and quartz. Felsic lava has a higher viscosity than other magma types. Felsic magmas can erupt at temperatures as low as 650 to 750 °C. Unusually hot (>950 °C) rhyolite lavas, however, may flow for distances of many tens of kilometres NMDCO_relaxed.owl ENVO:01000233 biolink:NamedThing intermediate lava Intermediate lava is lava which, relative to felsic lava, is lower in aluminium and silica (between 52 and 63 percent by weight), and usually somewhat richer in magnesium and iron. The temperature of intermediate lava ranges from 750 to 950 degrees Celsius, destroying polymerized bonds and promoting more fluid behaviour relative to felsic lavas and also a greater tendency to form phenocrysts. Higher iron and magnesium tends to manifest as a darker groundmass, and also occasionally amphibole or pyroxene phenocrysts. NMDCO_relaxed.owl ENVO:01000234 biolink:NamedThing mafic lava Mafic lava is lava which, relative to other lava types other than ultramafic lava, has a high ferromagnesian content and low aluminium and silica content, with silca making up between 45 and 52 percent of its weight. NMDCO_relaxed.owl ENVO:01000235 biolink:NamedThing ultramafic lava Lava which, relative to other lava types, has very high magnesium oxide content and less than 45 percent silica by weight. NMDCO_relaxed.owl ENVO:01000444 biolink:NamedThing dacitic lava Lava which is high in silica and low in alkali metal oxides. NMDCO_relaxed.owl ENVO:01000239 biolink:NamedThing oak woodland An oak woodland is a woodland which has a tree community primarily composed of oak trees. NMDCO_relaxed.owl ENVO:01000240 biolink:NamedThing conifer woodland A conifer woodland is a woodland which has a tree community primarily composed of coniferous trees, from the Division Pinophyta, also known as Coniferophyta or Coniferae. NMDCO_relaxed.owl ENVO:01000374 biolink:NamedThing dry woodland A dry woodland is a woodland which occurs in areas of rain shadow in a tropical marine climate, receives very little rainfall, typically has rapidly draining soils and trees which have adaptations to dry climates such as thick bark, small leaves, and the disposition to shed their leaves. NMDCO_relaxed.owl ENVO:01000241 biolink:NamedThing juniper woodland A juniper woodland is a woodland which has a tree community primarily composed of trees of the genus Juniperus. NMDCO_relaxed.owl ENVO:01000244 biolink:NamedThing pinyon juniper woodland A pinyon juniper woodland is a conifer woodland which has a tree community primarily composed of trees of the subsection Cembroides of the genus Pinus and the genus Juniperus. NMDCO_relaxed.owl ENVO:01000347 biolink:NamedThing montane conifer woodland A montane conifer woodland is a conifer woodland which is located within an altitude range that falls between mid-altitude forests and the tree line. NMDCO_relaxed.owl ENVO:01000949 biolink:NamedThing lichen woodland A woodland which has an understory partially covered by lichen mats and tundra-like vegetation. NMDCO_relaxed.owl ENVO:01000245 biolink:NamedThing cropland biome A cropland ecosystem which is undergoing climactic ecological succession. NMDCO_relaxed.owl ENVO:01000247 biolink:NamedThing rangeland biome A rangeland biome is an anthropogenic terrestrial biome which is primarily used for the rearing and grazing of livestock. NMDCO_relaxed.owl ENVO:01000773 biolink:NamedThing village A village is a clustered human settlement or community, larger than a hamlet but smaller than a town, with a population ranging from a few hundred to a few thousand. Though often located in rural areas, the term urban village is also applied to certain urban neighbourhoods. Villages are normally permanent, with fixed dwellings; however, transient villages can occur. Further, the dwellings of a village are fairly close to one another, not scattered broadly over the landscape, as a dispersed settlement. NMDCO_relaxed.owl ENVO:01000249 biolink:NamedThing urban biome An urban biome is a dense settlement biome which has been urbanised. NMDCO_relaxed.owl ENVO:01001679 biolink:NamedThing fluid front A fluid interface which separates two fluid masses with differing properties. NMDCO_relaxed.owl ENVO:01001680 biolink:NamedThing gaseous front A fluid front which is composed primarily of gaseous material and separates at least two gaseous masses. NMDCO_relaxed.owl ENVO:01000267 biolink:NamedThing atmosphere An atmosphere is a layer of gases surrounding a material body of sufficient mass that is held in place by the gravity of the body. NMDCO_relaxed.owl ENVO:01001678 biolink:NamedThing fluid layer A layer which is composed primarily of some fluid. NMDCO_relaxed.owl ENVO:01000543 biolink:NamedThing atmospheric layer A layer that is part of the atmosphere. NMDCO_relaxed.owl ENVO:01001273 biolink:NamedThing liquid layer A layer which is primarily composed of some liquid material. NMDCO_relaxed.owl ENVO:01001683 biolink:NamedThing gaseous surface layer A fluid surface layer which is composed primarily of some gaseous material. NMDCO_relaxed.owl ENVO:01000268 biolink:NamedThing atmospheric water vapour Atmospheric water vapour is water vapour that is part of an atmosphere. NMDCO_relaxed.owl ENVO:01000274 biolink:NamedThing slate Slate is a metamorphic rock which is fine-grained, foliated, homogeneous, Slates are derived from clastic sedimentary rocks. NMDCO_relaxed.owl ENVO:01000277 biolink:NamedThing water ice Ice which is formed from water. NMDCO_relaxed.owl ENVO:01001138 biolink:NamedThing carbon dioxide ice Ice which is primarily composed of carbon dioxide. NMDCO_relaxed.owl ENVO:01001140 biolink:NamedThing ammonia ice Ice which is primarily composed of ammonia. NMDCO_relaxed.owl ENVO:01001141 biolink:NamedThing carbon monoxide ice Ice which is primarily composed of carbon monoxide. NMDCO_relaxed.owl ENVO:03000007 biolink:NamedThing blue ice Water ice containing little to no air bubbles resulting in a reduction of internal light scattering and, given sufficient volume, a blue appearance. NMDCO_relaxed.owl ENVO:01000286 biolink:NamedThing dimictic lake A dimitic lake is a holomictic lake which mixes from top to bottom during two mixing periods each year. Mixing typically occurs during the spring and autumn, when the lake is "isothermal" (i.e., at the same temperature from the top to the bottom). At this time the water throughout the lake is about 4°C, and, in the absence of any temperature or density differences, the lake readily mixes from top to bottom. These lakes are common in regions with temperate climates. NMDCO_relaxed.owl ENVO:01000287 biolink:NamedThing polymictic lake A polymictic lake is a holomictic lake which is too shallow to allow thermal stratification and which can mix from top to bottom through the ice-free period of the year. NMDCO_relaxed.owl ENVO:01000288 biolink:NamedThing monomictic lake A monomictic lake is a holomictic lake which mixes from top to bottom during one mixing period each year. NMDCO_relaxed.owl ENVO:01000289 biolink:NamedThing cold monomictic lake A monomictic lake which is covered by ice throughout much of the year and only mixes when its surface ice melts and the lake lacks thermal stratification. NMDCO_relaxed.owl ENVO:01000290 biolink:NamedThing warm monomictic lake A monomictic lake which does not freeze and is thermally stratified throughout most of the year, only mixing in winter when cooler temperatures ease stratification. NMDCO_relaxed.owl ENVO:01000291 biolink:NamedThing cold polymictic lake A cold polymictic lake is a polymictic lake which is covered by ice in winter. NMDCO_relaxed.owl ENVO:01000292 biolink:NamedThing warm polymictic lake A warm polymictic lake is a polymictic lake which is not covered by ice at any point during the year. NMDCO_relaxed.owl ENVO:01001109 biolink:NamedThing Karman vortex street A succession of swirling vortices caused by the unsteady separation of flow of a fluid around one or more blunt bodies. NMDCO_relaxed.owl ENVO:01001743 biolink:NamedThing plume A fluid astronomical body part which is plume shaped. NMDCO_relaxed.owl ENVO:01000303 biolink:NamedThing endolithic environment An endolithic environment is an environment that exists within solid rock. NMDCO_relaxed.owl ENVO:01000308 biolink:NamedThing extraterrestrial environment An environmental system which is located beyond the Earth's exosphere and away from the Earth's core. NMDCO_relaxed.owl ENVO:01000309 biolink:NamedThing cold environment An environment which has a lower temperature than some local or global average. NMDCO_relaxed.owl ENVO:01000313 biolink:NamedThing anthropogenic environment An anthropogenic environment is an environmental system which is the product of human activity. NMDCO_relaxed.owl ENVO:01000315 biolink:NamedThing acidic environment An acidic environment is an environment in which material entities are exposed to a low pH. NMDCO_relaxed.owl ENVO:01000317 biolink:NamedThing aquatic environment An environment whose dynamics are strongly influenced by water. NMDCO_relaxed.owl ENVO:01000997 biolink:NamedThing environmental system determined by a quality An environmental system which is determined by materials bearing roughly homogeneous qualities. NMDCO_relaxed.owl ENVO:01000998 biolink:NamedThing environmental system determined by a material An environmental system within which an environmental material strongly influences the system's composition and properties. NMDCO_relaxed.owl ENVO:01000999 biolink:NamedThing rhizosphere environment An environmental system determined by the presence of a plant rhizosphere. NMDCO_relaxed.owl ENVO:01001000 biolink:NamedThing environmental system determined by an organism An environmental system which is determined by a living organism. NMDCO_relaxed.owl ENVO:01001001 biolink:NamedThing plant-associated environment An environmental system determined by a green plant. NMDCO_relaxed.owl ENVO:01001002 biolink:NamedThing animal-associated environment An environmental system determined by an animal. NMDCO_relaxed.owl ENVO:01001029 biolink:NamedThing fecal environment An environmental system which has its properties and dynamics determined by feces. NMDCO_relaxed.owl ENVO:01001030 biolink:NamedThing environment determined by a metazoan secretion An environmental system which has its properties and dynamics determined by a bodily secretion of a metazoan. NMDCO_relaxed.owl ENVO:01001031 biolink:NamedThing environment determined by a plant substance An environmental system which has its properties and dynamics determined by a substance produced by a plant. NMDCO_relaxed.owl ENVO:01001033 biolink:NamedThing digestive tract environment An environmental system which has its properties and dynamics determined by a digestive tract. NMDCO_relaxed.owl ENVO:01001041 biolink:NamedThing fungi-associated environment An environmental system determined by a fungal structure. NMDCO_relaxed.owl ENVO:01001046 biolink:NamedThing planetary subsurface environment An environmental system which has its properties and dynamics determined by the subsurface zone of a planet. NMDCO_relaxed.owl ENVO:01001048 biolink:NamedThing sediment environment An environmental system which has its properties and dynamics determined by sediment. NMDCO_relaxed.owl ENVO:01001052 biolink:NamedThing aerosol environment An environmental system which has its properties and dynamics determined by an aerosol. NMDCO_relaxed.owl ENVO:01001180 biolink:NamedThing Bondon cheese environment An environment which has its properties and composition determined by a portion of Bondon cheese. NMDCO_relaxed.owl ENVO:01001701 biolink:NamedThing tropical environment An environment which has a climate with continually high temperatures and with considerable precipitation, at least during part of the year. NMDCO_relaxed.owl ENVO:01001702 biolink:NamedThing subtropical environment An environment which has a climate with warm temperatures and with meagre precipitation. NMDCO_relaxed.owl ENVO:01001703 biolink:NamedThing polar environment An environment which is located in a part of an astronomical body subject to polar climatic conditions. NMDCO_relaxed.owl ENVO:01001704 biolink:NamedThing subpolar environment An environment which is located in a part of an astronomical body subject to subpolar climatic conditions. NMDCO_relaxed.owl ENVO:01001705 biolink:NamedThing temperate environment An environment which is located in a part of an astronomical body subject to temperate climatic conditions. NMDCO_relaxed.owl ENVO:03501101 biolink:NamedThing outdoor environment An environmental system which is not sheltered. NMDCO_relaxed.owl ENVO:03501311 biolink:NamedThing environmental monitoring area An environmental system where environmental monitoring processes are in effect. NMDCO_relaxed.owl ENVO:03501318 biolink:NamedThing hygienic food production area An environmental system which is part of a food production facility and whose boundaries are defined by hygienic requirements. NMDCO_relaxed.owl ENVO:2100000 biolink:NamedThing anatomical entity environment An environment which is determined by an anatomical entity. NMDCO_relaxed.owl ENVO:01000304 biolink:NamedThing high pressure environment A high pressure environment is an environment in which all material entities are exposed to a high ratio of force per unit area. NMDCO_relaxed.owl ENVO:01000305 biolink:NamedThing high temperature environment A high temperature environment is an environment in which material entities are exposed to increased levels of heat radiation or which have molecules or atoms moving randomly with increased levels of average kinietic energy. NMDCO_relaxed.owl ENVO:01000314 biolink:NamedThing high osmolarity environment A high osmolarity environment is an environment in which entities are exposed to high concentrations of solutes. NMDCO_relaxed.owl ENVO:01000316 biolink:NamedThing alkaline environment An alkaline environment is an environment in which entities are exposed to high pH, typically greater than a pH of 9. NMDCO_relaxed.owl ENVO:01001003 biolink:NamedThing non-saline environment NMDCO_relaxed.owl ENVO:01001040 biolink:NamedThing saline environment An environment which is determined by materials which bear significant concentrations of salts. NMDCO_relaxed.owl ENVO:01001840 biolink:NamedThing safe environment An environment in which material entities have a low likelihood of being damaged or destroyed. NMDCO_relaxed.owl ENVO:03500007 biolink:NamedThing noisy environment An environment in which entities are exposed to either excessive or constant sound. NMDCO_relaxed.owl ENVO:03500009 biolink:NamedThing attractive environment An environment which includes components which are deemed to be aesthetically pleasing by a population of humans. NMDCO_relaxed.owl ENVO:03500010 biolink:NamedThing shady environment An environmental system which is shielded from direct stellar irradiation by material entities. NMDCO_relaxed.owl ENVO:03500011 biolink:NamedThing violent environment An environment in which humans are exposed to regularly occurring physical or emotional violence. NMDCO_relaxed.owl ENVO:01000306 biolink:NamedThing freshwater environment An aquatic environment which is determined by freshwater. NMDCO_relaxed.owl ENVO:01000307 biolink:NamedThing saline water environment An environmental system which has its properties and dynamics determined by saline water. NMDCO_relaxed.owl ENVO:01001042 biolink:NamedThing sterile water environment An environmental system which has its properties and dynamics determined by sterile water. NMDCO_relaxed.owl ENVO:01001053 biolink:NamedThing saline aerosol environment An environmental system which has its properties and dynamics determined by a saline aerosol. NMDCO_relaxed.owl ENVO:01000310 biolink:NamedThing haline environment A haline environment is an environment in which entities are exposed to high concentrations of salt, typically above 2 molar. NMDCO_relaxed.owl ENVO:01000311 biolink:NamedThing cultivated environment A cultivated environment is an environment that has been modified by humans by the preparation of the land, usually for the purposes of growing crops. NMDCO_relaxed.owl ENVO:01000312 biolink:NamedThing culturing environment A culturing environment is an environment which is maintained by humans for the purposes of preparing cell, organ, tissue and plant tissue cultures. NMDCO_relaxed.owl ENVO:01001405 biolink:NamedThing laboratory environment An anthropogenic environment which is bounded by the building envelope of a laboratory and in which a system of manufactured products exert control on one or more of its environmental conditions. NMDCO_relaxed.owl ENVO:03500006 biolink:NamedThing food desert An anthropogenic environment in which populations of humans have limited acess to affordable and nutritious food. NMDCO_relaxed.owl ENVO:03501323 biolink:NamedThing residential environment An anthropogenic environment which provides long-term shelter for its inhabitants. NMDCO_relaxed.owl ENVO:03501331 biolink:NamedThing healthcare environment An anthropogenic environment which is bounded by a healthcare facility in which health care services are provided by specialized staff and equipment. NMDCO_relaxed.owl ENVO:03501332 biolink:NamedThing occupational environment An anthropogenic environment which is the product of a particular human occupational acitivity. NMDCO_relaxed.owl ENVO:03501333 biolink:NamedThing child care environment An anthropogenic environment which is designed for child care. NMDCO_relaxed.owl ENVO:03501339 biolink:NamedThing household environment An anthropogenic environment which is bounded by a human dwelling. NMDCO_relaxed.owl ENVO:01000318 biolink:NamedThing extreme high temperature environment An extreme high temperature environment is a high temperature environment in which entities are exposed to temperatures above 80 degrees Celsius. NMDCO_relaxed.owl ENVO:01000321 biolink:NamedThing sea water environment An environmental system determined by seawater. NMDCO_relaxed.owl ENVO:01000322 biolink:NamedThing brackish water environment An environment determined by the presence of brackish water. NMDCO_relaxed.owl ENVO:01001043 biolink:NamedThing hypersaline water environment An environmental system which has its properties and dynamics determined by hypersaline water. NMDCO_relaxed.owl ENVO:01000323 biolink:NamedThing atmospheric boundary layer The atmospheric boundary layer is the lowest layer of an atmosphere which is strongly influenced by its contact with a planetary surface with strong vertical mixing and in which physical quantities such as flow velocity, temperature, and moisture display rapid fluctuations (turbulence). NMDCO_relaxed.owl ENVO:01000544 biolink:NamedThing boundary layer A boundary layer is a layer of fluid in the immediate vicinity of a bounding surface where the effects of viscosity are significant enough to distort the surrounding non-viscous flow. NMDCO_relaxed.owl ENVO:01001310 biolink:NamedThing liquid surface layer A surface layer which is composed primarily of some liquid. NMDCO_relaxed.owl ENVO:01000327 biolink:NamedThing strand swamp A strand swamp is a swamp that forms linear drainage channels on flatlands. NMDCO_relaxed.owl ENVO:01000328 biolink:NamedThing dome swamp A dome swamp is a swamp which occurs in a depression where deeper waters at the centre of the swamp allow trees to grow taller relative to those in shallower regions of the depression. This creates a dome-like shape. NMDCO_relaxed.owl ENVO:01000331 biolink:NamedThing cypress swamp A cypress swamp is a swamp which has a plant community dominated by Cupressaceae, often swamp cypresses. Swamp cypresses typically belong to the genus Taxodium or the species Glyptostrobus pensilis and Actinostrobus pyramidalis. NMDCO_relaxed.owl ENVO:01000329 biolink:NamedThing cypress dome A cypress dome swamp is a dome swamp which has a plant community dominated by Cupressaceae, often swamp cypresses. Swamp cypresses typically belong to the genus Taxodium or the species Glyptostrobus pensilis and Actinostrobus pyramidalis. NMDCO_relaxed.owl ENVO:01000330 biolink:NamedThing cypress strand swamp A cypress strand swamp is a strand swamp which has a plant community dominated by Cupressaceae, often swamp cypresses. Swamp cypresses typically belong to the genus Taxodium or the species Glyptostrobus pensilis and Actinostrobus pyramidalis. NMDCO_relaxed.owl ENVO:01000335 biolink:NamedThing understory An understory is a layer of plant life which grows below the canopy without penetrating it. NMDCO_relaxed.owl ENVO:01000355 biolink:NamedThing vegetation layer A layer which is determined by a form of vegetation. NMDCO_relaxed.owl ENVO:01000336 biolink:NamedThing shrub layer A shrub layer is a layer of vegetation in a woodland or forest consisting of low, woody vegetation of frutescent form. NMDCO_relaxed.owl ENVO:01000337 biolink:NamedThing herb and fern layer A herb and fern layer is a layer of a forest or woodland which is composed of all vascular plant life that are one metre or less in height. NMDCO_relaxed.owl ENVO:01000338 biolink:NamedThing litter layer NMDCO_relaxed.owl ENVO:01001242 biolink:NamedThing canopy A vegetation layer which is formed by a collection of individual plant crowns, themselves constituting part of the aboveground portion of a plant community. NMDCO_relaxed.owl ENVO:01000340 biolink:NamedThing alpine An altitudinal condition which inheres in a bearer by virtue of the bearer having a monthly mean temperature is less than 10 degrees Celsius and being located at altitudes above the tree line and below the snowline. NMDCO_relaxed.owl ENVO:01000341 biolink:NamedThing subalpine An altitudinal condition which inheres in a bearer by virtue of the bearer being located at an altitude immediately below the tree line of an elevation. NMDCO_relaxed.owl ENVO:01000342 biolink:NamedThing montane An altitudinal condition which inheres in a bearer by virtue of the bearer being located at an altitude between mid-altitude forests and the tree line. NMDCO_relaxed.owl ENVO:01000344 biolink:NamedThing nival An altitudinal condition which inheres in a bearer by virtue of the bearer having extremely limited vegetation cover, silica-enriched soils, and ground cover dominated by snow and ice at altitudes above the snowline. NMDCO_relaxed.owl ENVO:01000345 biolink:NamedThing upper montane An upper montane condition is a montane condition in which an altitude range falls immediately below the tree line. NMDCO_relaxed.owl ENVO:01000346 biolink:NamedThing lower montane A lower montane condition is a montane condition in which an altitude range falls immediately above mid-altitude forests. NMDCO_relaxed.owl ENVO:01000354 biolink:NamedThing ice cap climatic condition An ice cap climatic condition is a polar condition in which the montly average temperature does not exceed 0 degrees Celsius. NMDCO_relaxed.owl ENVO:01001274 biolink:NamedThing material isosurface A layer throughout which one or more qualities (e.g. pressure, temperature, velocity, density) maintain an approximately constant value. NMDCO_relaxed.owl ENVO:06105266 biolink:NamedThing soil layer A layer that is composed primarily of soil. NMDCO_relaxed.owl ENVO:01000359 biolink:NamedThing limestone cave A cave formed in limestone, usually by dissolution of limestone by acidic groundwater. NMDCO_relaxed.owl ENVO:01001360 biolink:NamedThing Paramo An alpine tundra ecosystem which exists above the continuous timberline but below the permanent snowline on elevated land in tropical regions. NMDCO_relaxed.owl ENVO:01000375 biolink:NamedThing tropical marine condition A tropical marine condition is a tropical condition in which the ocean strongly influences the climate and a wet and dry season occur. NMDCO_relaxed.owl ENVO:01000376 biolink:NamedThing tropical marine semi-evergreen forest A semi-evergreen forest is a forest which undergoes a long dry season and, as a consequence, has a two-storey layer structure, a dry canopy, a leaf litter layer that only decays during moist periods trees with very small leaves or which shed their leaves to conserve water and which flower during the dry season and grow during the wet season. NMDCO_relaxed.owl ENVO:01000392 biolink:NamedThing tropical upper montane forest A montane forest which is located in a region subject to tropical climate patterns modulated by sufficient elevation to encounter upper montane climate patterns. NMDCO_relaxed.owl ENVO:01000393 biolink:NamedThing tropical lower montane forest A montane forest which is located in a region subject to tropical climate patterns modulated by sufficient elevation to encounter lower montane climatic patterns. NMDCO_relaxed.owl ENVO:01000394 biolink:NamedThing tropical freshwater swamp forest A freshwater swamp forest which is subject to tropical climate patterns. NMDCO_relaxed.owl ENVO:01000396 biolink:NamedThing tropical sclerophyllous dry forest A sclerophyllous forest which is subject to tropical climate patterns. NMDCO_relaxed.owl ENVO:01000400 biolink:NamedThing tropical thorn forest NMDCO_relaxed.owl ENVO:01000403 biolink:NamedThing tropical mangrove NMDCO_relaxed.owl ENVO:01000380 biolink:NamedThing oceanic temperate An oceanic temperate condition is a temperate condition which is strongly influenced by oceans and oceanic winds. Summers are cool and winters are cool, but not cold, and there is little frozen precipitation at lower elevations. NMDCO_relaxed.owl ENVO:01000381 biolink:NamedThing continental temperate A continental temperate condition is a temperate condition which is influenced by large land masses. Summers are warm to hot and winters are often long, cold, and snowy. NMDCO_relaxed.owl ENVO:01001457 biolink:NamedThing cloud forest A montane forest ecosystem which 1) is evergreen, 2) present on mountains where there is frequent cloud and mist cover, 3) which has a large proportion of ferns and mosses in its plant communities, growing on all tree trunks and branches present in the ecosystem, and 3) harvests aerosolised water and adds it to the terrestrial water supply. NMDCO_relaxed.owl ENVO:01000401 biolink:NamedThing tropical mixed needleleaf forest A mixed needleleaf forest which has communities of trees composed primarily of species with needle-like leaves (e.g. conifers). NMDCO_relaxed.owl ENVO:01000402 biolink:NamedThing tropical mixed broadleaf forest A tropical mixed broadleaf forest which has communities of trees composed primarily of species with broad leaves. NMDCO_relaxed.owl ENVO:01000405 biolink:NamedThing respirable suspended particulate matter A portion of respirable suspended particulate matter is a form of particulate matter composed primarily of solid particles each with a diameter of 10 micrometers or less. NMDCO_relaxed.owl ENVO:01001089 biolink:NamedThing aerosolised solids An aerosol which has non-gaseous parts that are primarily composed of solid particles. NMDCO_relaxed.owl ENVO:01001402 biolink:NamedThing haze An aersolised mass of dust, smoke, or other dry particulates which scatters visible light thus obsscuring visibility through an atmosphere. NMDCO_relaxed.owl ENVO:03000139 biolink:NamedThing ice fog Fog which is composed of particles of ice. NMDCO_relaxed.owl ENVO:01000413 biolink:NamedThing old plant A whole plant which is relatively old NMDCO_relaxed.owl PO:0000003 biolink:NamedThing whole plant A plant structure (PO:0005679) which is a whole organism. NMDCO_relaxed.owl ENVO:01000414 biolink:NamedThing young plant A whole plant which is relatively young. NMDCO_relaxed.owl FOODON:03411013 biolink:NamedThing plant used for producing extract or concentrate NMDCO_relaxed.owl PO:0008037 biolink:NamedThing seedling A whole plant (PO:0000003) in the seedling development stage (PO:0007131). NMDCO_relaxed.owl PO:0009009 biolink:NamedThing plant embryo A whole plant (PO:0000003) that participates in the plant embryo stage (PO:0007631). NMDCO_relaxed.owl PO:0025017 biolink:NamedThing plant spore A whole plant (PO:0000003) that arises through meiosis and is contained in a spore wall. NMDCO_relaxed.owl PO:0025279 biolink:NamedThing megagametophyte A whole plant in the gametophyte development stage (PO:0028003) that produces only plant egg cells (PO:0020094). NMDCO_relaxed.owl PO:0025280 biolink:NamedThing microgametophyte A whole plant (PO:0000003) in the gametophyte development stage (PO:0028003) that produces plant sperm cells (PO:0000084). NMDCO_relaxed.owl PO:0030027 biolink:NamedThing thallus A whole plant in the gametophytic phase that has a flat growth form and no distinct organs. NMDCO_relaxed.owl ENVO:01000415 biolink:NamedThing fine respirable suspended particulate matter A portion of fine respirable suspended particulate matter is a form of particulate matter composed primarily of solid particles each with a diameter of 2.5 micrometers or less. NMDCO_relaxed.owl ENVO:01000416 biolink:NamedThing ultrafine respirable suspended particulate matter A portion of fine respirable suspended particulate matter is a form of particulate matter composed primarily of solid particles each with a diameter of 100 nanometers or less. NMDCO_relaxed.owl ENVO:01000744 biolink:NamedThing human dwelling A self-contained constructed feature used by one or more households as a home, such as a house, apartment, mobile home, houseboat or other 'substantial' structure. A dwelling typically includes nearby outbuildings, sheds etc. within the curtilage of the property, excluding any 'open fields beyond'. It has significance in relation to search and seizure, conveyancing of real property, burglary, trespass, and land use planning. NMDCO_relaxed.owl ENVO:01000422 biolink:NamedThing bathroom A bathroom is a room which contains a washbasin or other fixture, such as a shower or bath, used for bathing by humans. NMDCO_relaxed.owl ENVO:01000423 biolink:NamedThing living room A living room is a room in a human house which is used for social and domestic leisure activities. NMDCO_relaxed.owl ENVO:01000425 biolink:NamedThing indoor toilet An indoor toilet is a room which contains a sanitation fixture used primarily for the disposal of human urine and faeces. NMDCO_relaxed.owl ENVO:03501125 biolink:NamedThing airport transit lounge A room in an airport where en-route passengers can wait between flights.. NMDCO_relaxed.owl ENVO:03501128 biolink:NamedThing conference room A room which accommodates conferences. NMDCO_relaxed.owl ENVO:03501145 biolink:NamedThing emergency unit room A room in which emergency medical care is provided. NMDCO_relaxed.owl ENVO:03501155 biolink:NamedThing intensive care unit room A room in which intensive medical care is provided. NMDCO_relaxed.owl ENVO:03501180 biolink:NamedThing patient room A room which is used for patient care during a patient's visit or stay in a healthcare facility. NMDCO_relaxed.owl ENVO:03501342 biolink:NamedThing dormitory A room which contains 1) a number of beds for sleeping and 2) often some other furniture and/or residential utilities. NMDCO_relaxed.owl ENVO:03600035 biolink:NamedThing cold room A room which is maintained at lower than ambient temperatures. NMDCO_relaxed.owl ENVO:01000428 biolink:NamedThing area of rocky shore A rocky shore is an intertidal area of a seacoast where solid rock is the predominant substrate. NMDCO_relaxed.owl ENVO:01000438 biolink:NamedThing lava flow A lava flow is a moving outpouring of lava, which is created during a non-explosive effusive eruption. NMDCO_relaxed.owl ENVO:03600066 biolink:NamedThing halite A salt mass which consists of isometric crystals of sodium chloride (NaCl). NMDCO_relaxed.owl ENVO:01000453 biolink:NamedThing carbon pooling disposition The disposition of an environmental system to sequester and store carbon. NMDCO_relaxed.owl ENVO:01000454 biolink:NamedThing carbon dioxide pooling disposition The disposition of an environment to sequester carbon dioxide, subsequently storing the carbon component thereof. NMDCO_relaxed.owl ENVO:01000456 biolink:NamedThing concrete masonry unit A concrete masonry unit is a large, rectangular masonry unit primarily composed of concrete. NMDCO_relaxed.owl ENVO:01000475 biolink:NamedThing brick A brick is a masonry unit which is composed of kneaded clay-bearing soil, expanded clay aggregate, sand and lime, or concrete material, fire-hardened or air-dried. NMDCO_relaxed.owl ENVO:01000459 biolink:NamedThing asphalt concrete Asphaltic concrete is a concrete which uses refined asphalt as a cement. NMDCO_relaxed.owl ENVO:01000460 biolink:NamedThing asphalt Asphalt also known as bitumen is a sticky, black, and highly viscous liquid or semi-solid form of petroleum. NMDCO_relaxed.owl ENVO:03510006 biolink:NamedThing diesel fuel A liquid fuel used in diesel engines, whose fuel ignition takes place, without any spark, as a result of compression of the inlet air mixture and then injection of fuel. NMDCO_relaxed.owl ENVO:03510007 biolink:NamedThing gasoline A clear petroleum-derived flammable liquid which is used as fuel in most spark-ignited internal combustion engines. NMDCO_relaxed.owl ENVO:01000463 biolink:NamedThing hydraulic cement Hydraulic cement is a masonry cement which contains activated aluminium silicates or pozzolans, such as fly ash, allowing it to set in wet conditions or underwater. NMDCO_relaxed.owl ENVO:01000464 biolink:NamedThing non-hydraulic cement Non-hydraulic cement is a cement which sets by reacting with carbon dioxide in the air and will not set in wet conditions or underwater. It is susceptible to attack by aggresive chemicals after setting. NMDCO_relaxed.owl ENVO:01000469 biolink:NamedThing exterior wall An exterior wall is a building wall which separates the interior of a building from the buildings surrounding environment. NMDCO_relaxed.owl ENVO:01000477 biolink:NamedThing gypsum plaster Gypsum plaster is a plaster which is formed by partially dehydrating gypsum by heating it to approximately 150 degrees Celsius and grinding the product into a powder. Gypsum anhydride - formed by heating gypsum above 200 degrees Celsius - may also be used as plaster. NMDCO_relaxed.owl ENVO:01000478 biolink:NamedThing cement plaster NMDCO_relaxed.owl ENVO:01000479 biolink:NamedThing lime plaster Lime plaster is a plaster which is primarily composed of calcium hydroxide and an inert filler (such as sand). Coversion of the calcium hydroxide to calcium carbonate through a reaction with carbon dioxide in the air causes the plaster to set. NMDCO_relaxed.owl ENVO:01000481 biolink:NamedThing silica-based glass Silica-based glass is a glass composed primarily of silicon dioxide, the primary constituent of sand. NMDCO_relaxed.owl ENVO:01000482 biolink:NamedThing soda-lime glass Soda-lime glass is a silica-based glass which is composed of approximately 75% silicon dioxide, with sodium oxide and calcium oxide consituting most of its remaining composition. NMDCO_relaxed.owl ENVO:01000485 biolink:NamedThing quartz glass Quartz glass is a glass which is composed of silica in amorphous (non-crystalline) form. NMDCO_relaxed.owl ENVO:01000483 biolink:NamedThing flat glass Flat glass is a soda-lime glass which is composed of approximately 73% silicon dioxide (silica), 14% sodium oxide, 9% calcium oxide, 4% magnesium oxide, 0.15% aluminium oxide, 0.03% potassium oxide, 0.02% titanum dioxide, and 0.01% iron III oxide. NMDCO_relaxed.owl ENVO:01000484 biolink:NamedThing container glass Container glass is a soda-lime glass which is composed of approximately 74% silicon dioxide (silica), 13% sodium oxide, 10.5% calcium oxide, 1.3% aluminium oxide, 0.3% potassium oxide, 0.2% sulphur trioxide, 0.2% magnesium oxide, 0.04% iron III oxide, and 0.01% titanum dioxide. NMDCO_relaxed.owl ENVO:01000487 biolink:NamedThing brick building floor A brick building floor is a building floor that is composed primarily of brick material or is built from bricks. NMDCO_relaxed.owl ENVO:01000488 biolink:NamedThing wooden building floor A wooden building floor is a building floor that is composed primarily of wood. NMDCO_relaxed.owl ENVO:01000489 biolink:NamedThing concrete building floor A concrete building floor is a building floor that is composed primarily of concrete NMDCO_relaxed.owl ENVO:01000490 biolink:NamedThing sandy building floor A sandy building floor is a building floor that is composed primarily of sand. NMDCO_relaxed.owl ENVO:01000491 biolink:NamedThing glass building floor A glass building floor is a building floor which is composed primarily of glass. NMDCO_relaxed.owl ENVO:01000492 biolink:NamedThing dung building floor A dung building floor is a building floor which is composed primarily of dried animal feces. NMDCO_relaxed.owl ENVO:01000493 biolink:NamedThing stone building floor A stone building floor is a building floor that is composed primarily of rock. NMDCO_relaxed.owl ENVO:01000494 biolink:NamedThing thatched exterior wall A thatched exterior wall is an exterior wall that is composed primarily of thatch. NMDCO_relaxed.owl ENVO:01000496 biolink:NamedThing straw exterior wall A straw exterior wall is an exterior wall that is composed primarily of straw. NMDCO_relaxed.owl ENVO:01000497 biolink:NamedThing mud exterior wall A mud exterior wall is an exterior wall that is composed primarily of mud. NMDCO_relaxed.owl ENVO:01000506 biolink:NamedThing concrete exterior wall A concrete exterior wall is an exterior wall that is composed primarily of concrete. NMDCO_relaxed.owl ENVO:01000509 biolink:NamedThing sheet-iron exterior wall A sheet-iron exterior wall is an exterior wall that is built from sheets of iron. NMDCO_relaxed.owl ENVO:01000499 biolink:NamedThing pole-reinforced mud exterior wall A pole-reinforced mud exterior wall is a mud exterior wall which is supported and reinforced by poles. NMDCO_relaxed.owl ENVO:01000501 biolink:NamedThing burnt brick A burnt brick is a brick which has been dried at an elvated temperature in a kiln, furnace, or with similar technology . NMDCO_relaxed.owl ENVO:01000502 biolink:NamedThing unburnt brick An unburnt brick is a brick which has been air dried rather than dried at an elvated temperature in a kiln, furnace, or with similar technology . NMDCO_relaxed.owl ENVO:01000503 biolink:NamedThing burnt-brick exterior wall A burnt brick exterior wall is an exterior wall that is built from burnt bricks. NMDCO_relaxed.owl ENVO:01000504 biolink:NamedThing unburnt-brick exterior wall An unburnt brick exterior wall is an exterior wall that is built from unburnt bricks. NMDCO_relaxed.owl ENVO:01000508 biolink:NamedThing salt material NMDCO_relaxed.owl ENVO:01000853 biolink:NamedThing marl Marl is a mass of calcium carbonate derived from mollusk shells and mixed with silt and clay. NMDCO_relaxed.owl ENVO:02000100 biolink:NamedThing mineral dust Dust which is derived from mineral material. NMDCO_relaxed.owl ENVO:01000510 biolink:NamedThing sheet-iron building roof A sheet-iron building roof is a building roof that is built from sheets of iron. NMDCO_relaxed.owl ENVO:01000511 biolink:NamedThing thatched building roof A thatched building roof is a building roof that is built by thatching (or out of thatch). NMDCO_relaxed.owl ENVO:01000512 biolink:NamedThing wooden building roof A wooden building roof is a building roof that is built from wood. NMDCO_relaxed.owl ENVO:01000513 biolink:NamedThing asbestos building roof An asbestos building roof is a building roof that is built from asbestos. NMDCO_relaxed.owl ENVO:01000515 biolink:NamedThing tiled building roof A tile building roof is a building roof that is built using tiles. NMDCO_relaxed.owl ENVO:01000516 biolink:NamedThing toilet fixture A fixture which is used primarily for the collection and, in some cases, disposal of human urine and feces. NMDCO_relaxed.owl ENVO:01000990 biolink:NamedThing sink fixture A plumbing fixture which is bowl-shaped and used for washing hands, dishwashing, and other purposes. NMDCO_relaxed.owl ENVO:01000991 biolink:NamedThing bathtub fixture A plumbing fixture which may serve as a container for water in which humans or other animals may bathe. NMDCO_relaxed.owl ENVO:01000992 biolink:NamedThing shower fixture A plumbing fixture within which a human or other animal may bathe under a spray of water. NMDCO_relaxed.owl ENVO:03501218 biolink:NamedThing toilet bowl A plumbing fixture which is bowl-shaped, part of a toilet fixture, and capable of contain human waste until it is disposed of. NMDCO_relaxed.owl ENVO:01000517 biolink:NamedThing pit latrine A pit latrine is a latrine which is constructed by digging a hole in the ground. NMDCO_relaxed.owl ENVO:01000519 biolink:NamedThing latrine A latrine is a toilet which is of simple construction (relative to a flush or chemical toilet) and typically intended for communal use. NMDCO_relaxed.owl ENVO:01000518 biolink:NamedThing diapir A diapir is a type of geologic intrusion in which a more mobile and ductily deformable material is forced into brittle overlying rocks due to its higher buoyancy. NMDCO_relaxed.owl ENVO:01000525 biolink:NamedThing rock intrusion An intrusion which is primarily composed of rock which has been formed within a pre-existing fracture in a larger mass of rock. NMDCO_relaxed.owl ENVO:01000526 biolink:NamedThing sedimentary intrusion A rock intrusion which is composed primarily of sedimentary rock. NMDCO_relaxed.owl ENVO:01000632 biolink:NamedThing chonolith A chonolith is an igneous rock intrusion of irregular shape with a demonstrable base, absent in other types of irregularly-shaped intrusions. NMDCO_relaxed.owl ENVO:01000734 biolink:NamedThing laccolith A sheet intrusion (or concordant pluton) that has been injected between two layers of sedimentary rock. The pressure of the magma is high enough that the overlying strata are forced upward, giving the laccolith a dome or mushroom-like form with a generally planar base. NMDCO_relaxed.owl ENVO:01000735 biolink:NamedThing lopolith A large igneous intrusion which is lenticular in shape with a depressed central region. NMDCO_relaxed.owl ENVO:01000736 biolink:NamedThing phacolith A phacolith is an intrusion parallel to the bedding plane or foliation of folded country rock. More specifically, it is a typically lens-shaped intrusion that occupies either the crest of an anticline or the trough of a syncline. NMDCO_relaxed.owl ENVO:01000737 biolink:NamedThing sill A tabular sheet intrusion that has intruded between older layers of sedimentary rock, beds of volcanic lava or tuff, or along the direction of foliation in metamorphic rock. NMDCO_relaxed.owl ENVO:01000527 biolink:NamedThing flush toilet fixture A toilet fixture which uses water to flush liquid and solid excreta into a sewage containment or processing facility through a drainpipe. NMDCO_relaxed.owl ENVO:01000528 biolink:NamedThing dry toilet fixture A toilet fixture which uses little to no water; excreta is removed manually or composted in situ. NMDCO_relaxed.owl ENVO:01000529 biolink:NamedThing chemical toilet fixture A chemical toilet fixture is a toilet fixture which uses chemicals to deodorise and treat excreta which is stored in the fixture. NMDCO_relaxed.owl ENVO:01001872 biolink:NamedThing manure pit A pit which is used for the collection and storage of manure. NMDCO_relaxed.owl ENVO:03600091 biolink:NamedThing clay fermentation pit A fermentation pit which is constructed from clay. NMDCO_relaxed.owl ENVO:01000523 biolink:NamedThing pit latrine with slab floor A pit latrine with a slab floor is a pit latrine which has a latrine slab as a floor. NMDCO_relaxed.owl ENVO:01000530 biolink:NamedThing ventilated improved pit latrine A ventilated improved pit latrine is a pit latrine which includes a vent pipe fitted to the pit with a flyscreen covering the pipe's outlet. Air currents moving across the outlet of the vent pipe create a vaccum which draws odors out of the latrine's superstructure. NMDCO_relaxed.owl ENVO:01000535 biolink:NamedThing pour-flush pit latrine A pit latrine which includes a water seal (U-trap or siphon) used over one or two offset pits instead of a plain hole or seat. Water is manually poured through the trap to flush excreta into the latrine pit. NMDCO_relaxed.owl ENVO:01000532 biolink:NamedThing covered pit latrine A covered pit latrine is a building which comprises a pit latrine sheltered by an outhouse. NMDCO_relaxed.owl ENVO:01000533 biolink:NamedThing covered pit latrine with slab floor A covered pit latrine with slab is a building which comprises a pit latrine with a slab floor sheltered by an outhouse. NMDCO_relaxed.owl ENVO:01000534 biolink:NamedThing pour-flush toilet fixture A flush toilet fixture into which water is manually poured to dispose of excreta. NMDCO_relaxed.owl ENVO:01000538 biolink:NamedThing stratosphere The layer of the atmosphere which is sandwiched between the troposphere and mesosphere. Of the energy that reaches the Earth from the sun, only 3% is absorbed in the stratosphere, but that includes the vitally important process of absorption of ultraviolet radiation by the stratospheric ozone layer. The stratosphere is cloudless and dust free, and almost unaffected by the turbulent conditions of the underlying level of the atmosphere. (Source: WRIGHT) NMDCO_relaxed.owl ENVO:01000539 biolink:NamedThing mesosphere The mesosphere is part of the earth's atmosphere which is between the stratosphere and the thermosphere in which temperature decreases with altitude to the atmosphere's absolute minimum NMDCO_relaxed.owl ENVO:01000540 biolink:NamedThing troposphere The lowest of the concentric layers of the atmosphere, occurring between the Earth's surface and the tropopause. It is the zone where atmospheric turbulence is at its greatest and where the bulk of the Earth's weather is generated. It contains almost all the water vapour and aerosols and three-quarters of the total gaseous mass of the atmosphere. Throughout the troposphere temperature decreases with height at a mean rate of 6.5°C/km and the whole zone is capped by either an inversion of temperature or an isothermal layer at the tropopause. (Source: WHIT) NMDCO_relaxed.owl ENVO:01000541 biolink:NamedThing thermosphere The thermosphere is a part of the earth's atmosphere that begins at about 50 miles (80 kilometers) above the earth's surface, extends to outer space, and is characterized by steadily increasing temperature with height NMDCO_relaxed.owl ENVO:01000542 biolink:NamedThing ozone layer The ozone layer is a layer of gases in the stratosphere which contains high concentrations of ozone gas relative to other parts of the atmosphere. NMDCO_relaxed.owl ENVO:01000545 biolink:NamedThing ionosphere The ionosphere is a layer of the Earth's atmosphere which extends from about 60 to 1,000 kilometers above the planetary surface and is ionised by solar radiation. It includes the thermosphere and parts of the mesosphere and exosphere. NMDCO_relaxed.owl ENVO:01000546 biolink:NamedThing exosphere The exosphere is an atmospheric layer where molecules are gravitationally bound to a planetary body, but where their density is too low for them to behave as a gas by colliding with each other. In the case of bodies with substantial atmospheres, such as Earth's atmosphere, the exosphere is the uppermost layer, where the atmosphere thins out and merges with interplanetary space. It is located directly above the thermosphere. NMDCO_relaxed.owl ENVO:01001672 biolink:NamedThing frontal surface of a weather front A gaseous surface layer which is composed of the warmer air mass(es) along the horizontal density and temperature discontinuity in a weather front. NMDCO_relaxed.owl ENVO:01001681 biolink:NamedThing weather front A gaseous front which separates two masses of air with different densities and is a principal cause of meteorological phenomena. NMDCO_relaxed.owl ENVO:01001712 biolink:NamedThing free atmosphere An atmospheric layer which 1) is located above the planetary boundary layer, 2) in which the effect of friction between moving air masses and the planetary surface is negligible, and 3) in which the air is usually treated (dynamically) as an ideal fluid. NMDCO_relaxed.owl ENVO:03520000 biolink:NamedThing low atmospheric level NMDCO_relaxed.owl ENVO:03520001 biolink:NamedThing middle atmospheric level NMDCO_relaxed.owl ENVO:03520002 biolink:NamedThing high atmospheric level NMDCO_relaxed.owl ENVO:01000547 biolink:NamedThing glaze ice layer A glaze ice layer is a smooth, transparent and homogeneous ice layer which coats some surface and which is formed when freezing rain or drizzle hits that surface. NMDCO_relaxed.owl ENVO:03000074 biolink:NamedThing grease ice layer A layer which consists of a thin aggregate of frazil ice crystals, which float upon the surface of a water body. NMDCO_relaxed.owl ENVO:03000077 biolink:NamedThing slush ice layer A layer which consists of slush ice. NMDCO_relaxed.owl ENVO:01000550 biolink:NamedThing composting toilet A composting toilet fixture is a dry toilet fixture in which managed, aerobic decomposition converts human excreta into organic matter suitable for the fertilisation or amendment of soils. NMDCO_relaxed.owl ENVO:01000551 biolink:NamedThing paraffin oil A fuel oil which is 1) composed primarily of alkanes having between 5-15 carbon atoms with the general formula CnH2n+2, 2) is generally odorless or has only a slight odor, 3) produces only small amounts of soot relative to other fuel oils, 4) is highly refined. NMDCO_relaxed.owl ENVO:01001608 biolink:NamedThing kerosene oil A fuel oil which 1) is derived from petroleum oil, 2) has a strong odor, 3) produces large quantities of soot relative to other fuel oils, 4) is less refined than fuel oils such as paraffin. NMDCO_relaxed.owl ENVO:01000552 biolink:NamedThing natural gas Natural gas is a hydrocarbon gas mixture consisting primarily of methane, but commonly includes varying amounts of other higher alkanes and sometimes a usually lesser percentage of carbon dioxide, nitrogen, and/or hydrogen sulfide. Natural gas is a fossil fuel formed when layers of buried plants and gases are exposed to intense heat and pressure over thousands of years. NMDCO_relaxed.owl ENVO:01000556 biolink:NamedThing biogas Biogas is a mixture of different gases produced by the breakdown of organic matter in the absence of oxygen, is primarily composed of methane and carbon dioxide, and may have small amounts of hydrogen sulfide, water, and siloxanes. NMDCO_relaxed.owl ENVO:01000553 biolink:NamedThing liquefied petroleum gas Liquified petroleum gas or liquid petroleum gas (LPG or LP gas), also referred to as simply propane or butane, are flammable mixtures of hydrocarbon gases used as fuel in heating appliances, cooking equipment, and vehicles. NMDCO_relaxed.owl ENVO:01000557 biolink:NamedThing liquefied natural gas Liquefied natural gas (LNG) is natural gas (predominantly methane, CH4) that has been converted to liquid form for ease of storage or transport. It takes up about 1/600th the volume of natural gas in the gaseous state. It is odorless, colorless, non-toxic and non-corrosive. LNG achieves a higher reduction in volume than compressed natural gas (CNG) so that the (volumetric) energy density of LNG is 2.4 times greater than that of CNG or 60 percent of that of diesel fuel. NMDCO_relaxed.owl ENVO:01000555 biolink:NamedThing compressed natural gas Compressed natural gas is a natural gas stored at high pressures, typically 20–25 Megapascals. NMDCO_relaxed.owl ENVO:01000559 biolink:NamedThing compressed biogas Compressed biogas is biogas stored at increased pressures. NMDCO_relaxed.owl ENVO:01000561 biolink:NamedThing paraffin lamp A paraffin lamp is a type of lighting device which burns paraffin to generate light and heat. NMDCO_relaxed.owl ENVO:01000572 biolink:NamedThing electric lamp An electric lamp is a lamp which produces light from electricity. NMDCO_relaxed.owl ENVO:01000574 biolink:NamedThing candle A candle is a lamp composed of a wax within which an ignitable wick is embedded. NMDCO_relaxed.owl ENVO:01000597 biolink:NamedThing pressure lamp A pressure lamp is a portable paraffin or oil lamp in which fuel is forced up into the mantle or burner by air pressure in the reservoir, which can be increased by pumping with a plunger. NMDCO_relaxed.owl ENVO:01000562 biolink:NamedThing flat-wick lamp A flat-wick lamp is a simple type of paraffin lamp, which burns paraffin drawn up through a wick by capillary action. NMDCO_relaxed.owl ENVO:01000563 biolink:NamedThing central-draught lamp A central-draught lamp is a paraffin lamp which burns a parrafin saturated, tubular wick contained between two structural tubes and supplied with oxygen by a central draught of air through the innermost of these tube. NMDCO_relaxed.owl ENVO:01000564 biolink:NamedThing mantle lamp A mantle lamp is a central-draught lamp which includes a pear-shaped, fabric mesh containing thorium or other rare-earth salts placed over the burner. On first use the fabric burns away and the rare-earth salts are converted to oxides, leaving a very fragile structure which incandesces (glows brightly) upon exposure to the heat of the burner flame. NMDCO_relaxed.owl ENVO:01000567 biolink:NamedThing paraffin lantern A paraffin lantern is a lantern which houses a parrafin lamp in a structure of soldered or crimped-together sheet metal stampings and glass or other translucent material. NMDCO_relaxed.owl ENVO:01000568 biolink:NamedThing tubular paraffin lantern A tubular paraffin lantern is a paraffin lantern which includes metal tubes in its casing that direct air to the burning wick. NMDCO_relaxed.owl ENVO:01000569 biolink:NamedThing dead flame paraffin lantern A dead-flame paraffin lantern is a paraffin lantern which has a wick housed in a glass globe with airflow channelled upwards by vents below the burning wick and an open chimney above it. NMDCO_relaxed.owl ENVO:01000570 biolink:NamedThing hot-blast paraffin lantern A hot-blast paraffin lantern is a tubular paraffin lantern which collects hot air from the top of the lantern globe and circulates it, through metal tubes, to the burning wick. NMDCO_relaxed.owl ENVO:01000571 biolink:NamedThing cold-blast paraffin lantern A cold-blast paraffin lantern is a tubular paraffin lantern which collects cool air from around the top of the lantern globe and circulates it, through metal tubes, to the burning wick. NMDCO_relaxed.owl ENVO:01000573 biolink:NamedThing battery-powered electric lamp A battery-powered electric lamp is an electric lamp which draws its power from a device composed of two or more electrochemical cells that convert stored chemical energy into electrical energy. NMDCO_relaxed.owl ENVO:01000581 biolink:NamedThing mobile phone A mobile phone is a telephone which transmits sound information to a mobile phone network via radio transmissions. NMDCO_relaxed.owl ENVO:01000582 biolink:NamedThing landline telephone A landline telephone is a telephone which is connected to a telephone network with wires through which electronic signals are carried. NMDCO_relaxed.owl ENVO:01000584 biolink:NamedThing table A table is a form of furniture with a flat horizontal upper surface used to support objects, for storage, show, and/or manipulation. NMDCO_relaxed.owl ENVO:01000586 biolink:NamedThing chair A chair is a piece of furniture with a raised surface commonly used to seat a single person. NMDCO_relaxed.owl ENVO:01000589 biolink:NamedThing bench A bench is a piece of furniture, on which several people may sit at the same time. NMDCO_relaxed.owl ENVO:01000590 biolink:NamedThing mattress A mattress is a mass of material which is able to cushion and support a reclining body and is used as or on a bed. NMDCO_relaxed.owl ENVO:01000591 biolink:NamedThing bed frame A bed frame is a piece of furniture which is used to position a mattress and bed base and may include a means of supporting a canopy. NMDCO_relaxed.owl ENVO:01000592 biolink:NamedThing bed base A bed base is a piece of furniture which supports a mattress. NMDCO_relaxed.owl ENVO:01000593 biolink:NamedThing framed bed A framed bed is a piece of furniture which is composed of a mattress supported by a bed base and held in place by a bed frame. NMDCO_relaxed.owl ENVO:01000594 biolink:NamedThing cabinet A cabinet is a roughly cuboidal piece of furniture which is used to store miscellaneous items in compartments accessible through doors or drawers. NMDCO_relaxed.owl ENVO:01000585 biolink:NamedThing desk A desk is a table which is intended for information-manipulation tasks, including writing and use of interactive electronics. NMDCO_relaxed.owl ENVO:01000588 biolink:NamedThing sofa A sofa is a bench which is partially or entirely upholstered, and often fitted with springs and tailored cushions. NMDCO_relaxed.owl ENVO:01000595 biolink:NamedThing cupboard A cupboard is a cabinet which is used indoors to store household objects such as food, crockery, textiles and liquor, and to protect them from dust and dirt NMDCO_relaxed.owl ENVO:01000599 biolink:NamedThing river water NMDCO_relaxed.owl ENVO:01000601 biolink:NamedThing motor vehicle A motor vehicle is a vehicle which is propelled by an engine or motor and that does not operate on rails. NMDCO_relaxed.owl ENVO:01000606 biolink:NamedThing cart A cart is a vehicle which has two wheels and is designed to transport human passengers or cargo. NMDCO_relaxed.owl ENVO:01000613 biolink:NamedThing watercraft A watercraft is a vehicle which is able to travel on or through water. NMDCO_relaxed.owl ENVO:01000614 biolink:NamedThing bicycle A bicycle is a human-powered, pedal-driven, single-track vehicle, having two wheels attached to a frame, one behind the other. NMDCO_relaxed.owl ENVO:01001488 biolink:NamedThing aircraft A vehicle which is able to travel through air in an atmosphere. NMDCO_relaxed.owl ENVO:01003000 biolink:NamedThing spacecraft A vehicle designed to fly in outer space. NMDCO_relaxed.owl ENVO:03501107 biolink:NamedThing train A vehicle which locomotes using rails and consists of a series of connected compartments used to transport passengers or cargo. NMDCO_relaxed.owl ENVO:03600051 biolink:NamedThing train car A vehicle which is used for carrying cargo or passengers on a rail transport system. NMDCO_relaxed.owl ENVO:01000602 biolink:NamedThing truck A truck is a motor vehicle which, as its primary funcion, transports cargo rather than human passangers. NMDCO_relaxed.owl ENVO:01000605 biolink:NamedThing car A car is a wheeled motor vehicle used primarily for the transportation of human passengers. Most definitions of the term specify that cars are designed to run primarily on roads, to have seating for one to eight people, to typically have four wheels, and to be constructed principally for the transport of people rather than goods. NMDCO_relaxed.owl ENVO:01000609 biolink:NamedThing motor boat A motor boat is a boat which is propelled by a motor. NMDCO_relaxed.owl ENVO:01000611 biolink:NamedThing bus A bus is a road vehicle designed to carry many passengers. NMDCO_relaxed.owl ENVO:01000615 biolink:NamedThing motorcycle A motorcycle is a two- or three-wheeled motor vehicle. NMDCO_relaxed.owl ENVO:03501103 biolink:NamedThing ambulance A motor vehicle which is equipped with medical equipment and can be used to transport humans to treatment facilities. NMDCO_relaxed.owl ENVO:01000603 biolink:NamedThing water truck A water truck is a truck which transports water. NMDCO_relaxed.owl ENVO:01000971 biolink:NamedThing food truck A truck which is equipped to cook and sell food. NMDCO_relaxed.owl ENVO:01000607 biolink:NamedThing animal-drawn cart An animal-drawn cart is a cart which is attached to one or more working or draught animals. NMDCO_relaxed.owl ENVO:01000608 biolink:NamedThing boat A boat is a watercraft of any size which is able to float or plane on water. NMDCO_relaxed.owl ENVO:03501104 biolink:NamedThing recreational cruise ship A boat which provides short-term residential and entertainment facilities to passengers. NMDCO_relaxed.owl ENVO:03501325 biolink:NamedThing transport boat A boat which is used to transport cargo or carry passengers. NMDCO_relaxed.owl ENVO:01000612 biolink:NamedThing taxicab A taxicab is a car which may be hired, along with its operator, to transport passengers between locations of their choosing. NMDCO_relaxed.owl ENVO:01000616 biolink:NamedThing motorscooter A scooter or motor scooter is a motorcycle with step-through frame and a platform for the rider's feet. NMDCO_relaxed.owl ENVO:01000622 biolink:NamedThing vaporisation Vaporisation of an element or compound is process whereby that element or compound undergoes a phase transition from the liquid to vapor. NMDCO_relaxed.owl ENVO:03000043 biolink:NamedThing material transformation process A process during which a portion of some environmental material is converted into a different material or a collection of materials. NMDCO_relaxed.owl ENVO:01000723 biolink:NamedThing melting Melting is a material transformation process which results in the phase transition of a substance from a solid to a liquid. NMDCO_relaxed.owl ENVO:01000727 biolink:NamedThing sublimation process Sublimation is a process during which a portion of some solid undergoes a phase transition into a portion of some gas. NMDCO_relaxed.owl ENVO:01000840 biolink:NamedThing thermolysis A chemical decomposition (the separation of a single chemical compound into its two or more elemental parts or to simpler compounds) caused by heat. NMDCO_relaxed.owl ENVO:01001084 biolink:NamedThing particulate matter formation process A process during which microscopic solid or liquid objects are formed. NMDCO_relaxed.owl ENVO:01001205 biolink:NamedThing lithification A process during which sediments compact under pressure, expel connate fluids, and gradually become solid sedimentary rock. NMDCO_relaxed.owl ENVO:01001510 biolink:NamedThing material congelation process A material transformation process during which a material's viscosity increase either through a reduction in temperature, through chemical reactions, or other physical effects. NMDCO_relaxed.owl ENVO:01001612 biolink:NamedThing material warming process A process during which the temperature of a portion of environmental material is increased, along with the kinetic energy of its constituent molecules. NMDCO_relaxed.owl ENVO:01001615 biolink:NamedThing material cooling process A process during which the temperature of a portion of environmental material is decreased, along with the kinetic energy of its constituent molecules. NMDCO_relaxed.owl ENVO:01001654 biolink:NamedThing aerosol formation process A material transformation process during which solid or liquid particles form and are suspended in a mass of air, thus creating an aerosol. NMDCO_relaxed.owl ENVO:03000003 biolink:NamedThing nivation A material transformation process during which recently precipitated, powdery snow transitions into firn or névé through compaction and/or through cycles of freezing and thawing. NMDCO_relaxed.owl ENVO:03000045 biolink:NamedThing brine rejection from seawater A material transformation process during which brine is formed due to the expulsion of salt during frazil formation or a seawater freezing process. NMDCO_relaxed.owl ENVO:06105119 biolink:NamedThing weathering A material transformation process during which the properties of a material are changed as a result of in situ exposure to atmospheric processes. NMDCO_relaxed.owl ENVO:01000623 biolink:NamedThing boiling Boiling is a form of vaporisation which occurs when a liquid is heated to a temperature at which the vapor pressure of the liquid is equal to the pressure exerted on the liquid by the surrounding environmental pressure. NMDCO_relaxed.owl ENVO:02500034 biolink:NamedThing evaporation Evaporation is a form of vaporisation which occurs when a portion of the surface layer of a liquid in contact with a gaseous material, which is not saturated with the evaporating substance, vaporises. NMDCO_relaxed.owl ENVO:01000624 biolink:NamedThing hydrological condensation process Hydrological condensation is a process in which atmospheric water vapour undergoes a phase transition from the gas phase to the liquid phase. NMDCO_relaxed.owl ENVO:01000724 biolink:NamedThing condensation process Condensation is a process during which a gas undergoes a phase transition into a liquid. NMDCO_relaxed.owl ENVO:02500031 biolink:NamedThing hydrological process An environmental process which has water - in any of its states - as a participant. NMDCO_relaxed.owl ENVO:01000633 biolink:NamedThing ecosystem-wide aerobic respiration A process which consists of all aerobic respiration processes instantiated in an ecosystem. NMDCO_relaxed.owl ENVO:01000634 biolink:NamedThing volcanic eruption A volcanic eruption is a process during which lava, tephra (ash, lapilli, volcanic bombs and blocks), and assorted gases are expelled from a volcanic vent or fissure. NMDCO_relaxed.owl ENVO:01000704 biolink:NamedThing hydrological evaporation Hydrological evaporation is the evaporation of water, generally as part of a planetary water cycle. NMDCO_relaxed.owl ENVO:01000720 biolink:NamedThing hydrological melting process A melting process during which water-based ice, snow, or other solid phase water transitions into a liquid phase. NMDCO_relaxed.owl ENVO:01000913 biolink:NamedThing nucleation of cloud condensation A process during which a solid particle or liquid droplet catalyses the condensation of water vapour in an atmosphere. NMDCO_relaxed.owl ENVO:01000920 biolink:NamedThing water ice sublimation process A sublimation process during which water ice transitions into a gaseous state. NMDCO_relaxed.owl ENVO:01000950 biolink:NamedThing water ice formation process A material transformation process during which water ice is formed. NMDCO_relaxed.owl ENVO:01000982 biolink:NamedThing water flow process A material transport process during which a volume of liquid water is transported due to a disequilibria in physical forces. NMDCO_relaxed.owl ENVO:01001083 biolink:NamedThing cloud formation process A process during which water vapour condensing in the atmosphere aggregates into clouds. NMDCO_relaxed.owl ENVO:01001220 biolink:NamedThing water accumulation process A process during which liquid water accumulates in a site, most often in some form of container. NMDCO_relaxed.owl ENVO:01001266 biolink:NamedThing thermal pollution of an aquatic system A thermal pollution process which occurs in a water body or aquatic environment. NMDCO_relaxed.owl ENVO:01001498 biolink:NamedThing thermokarst formation process A process by which landforms are formed from the thawing of ice-rich permafrost or the melting of massive ground ice. NMDCO_relaxed.owl ENVO:01001549 biolink:NamedThing freezing of water into water ice A freezing process during which liquid water is transformed into water ice. NMDCO_relaxed.owl ENVO:01001618 biolink:NamedThing ice accumulation process A material accumulation process during which ice forms in an environmental material or an existing accumulation of ice increases in mass. NMDCO_relaxed.owl ENVO:01001619 biolink:NamedThing snow and ice accumulation process A material accumulation process during which a accumulation of snow and ice forms or increases in mass. NMDCO_relaxed.owl ENVO:01001640 biolink:NamedThing glaciation of water droplets in a cloud A process during which supercooled water droplets in a cloud freeze into ice crystals. NMDCO_relaxed.owl ENVO:01001669 biolink:NamedThing mariculture process An aquaculture process during which marine organisms are cultivated in the open ocean, an enclosure in the ocean, or in tanks, ponds or raceways which are filled with seawater. NMDCO_relaxed.owl ENVO:01001725 biolink:NamedThing moist-adiabatic process An adiabatic process which involves air saturated with water vapour and the presence of liquid water. NMDCO_relaxed.owl ENVO:02000121 biolink:NamedThing peat extraction NMDCO_relaxed.owl ENVO:02500007 biolink:NamedThing ecosystem-wide photosynthesis A process which consists of all photosynthesis processes instantiated in an ecosystem. NMDCO_relaxed.owl ENVO:03000017 biolink:NamedThing glacial ice loss A process during which the mass of ice constituting a glacier decreases. NMDCO_relaxed.owl ENVO:03000042 biolink:NamedThing brine channel formation process A material accumulation process during which brine droplets, trapped between ice crystals formed during seawater freezing, form brine channels. NMDCO_relaxed.owl ENVO:03000055 biolink:NamedThing desublimation of water vapour into ice A desublimation process during which water vapour is frozen into water ice. NMDCO_relaxed.owl ENVO:03000086 biolink:NamedThing ice-bearing permafrost thawing process A permafrost thawing process during which water-based ice or snow present in permafrost is converted into meltwater. NMDCO_relaxed.owl ENVO:03000102 biolink:NamedThing glacial sintering A sintering process during which snow is compacted into glacial ice. NMDCO_relaxed.owl ENVO:01000626 biolink:NamedThing drylot A drylot is an enclosure of limited size usually bare of vegetation and used for fattening livestock. NMDCO_relaxed.owl ENVO:01000629 biolink:NamedThing climate change The long-term fluctuations in temperature, precipitation, wind, and all other aspects of the Earth's climate. External processes, such as solar-irradiance variations, variations of the Earth's orbital parameters (eccentricity, precession, and inclination), lithosphere motions, and volcanic activity, are factors in climatic variation. Internal variations of the climate system, e.g., changes in the abundance of greenhouse gases, also may produce fluctuations of sufficient magnitude and variability to explain observed climate change through the feedback processes interrelating the components of the climate system. NMDCO_relaxed.owl ENVO:01000630 biolink:NamedThing acidification of an aquatic environment Acidification of an aquatic environment is a process whereby the pH of an aquatic environment, biome, or water body is lowered. NMDCO_relaxed.owl ENVO:01000741 biolink:NamedThing recycling process A process during which materials deemed as waste are separated and converted into a form which can be used as input by the same processes which generated them. NMDCO_relaxed.owl ENVO:01000785 biolink:NamedThing material extraction process A planned process during which a portion of environmental material is removed from a material entity. NMDCO_relaxed.owl ENVO:01000870 biolink:NamedThing ground deformation process A process in which a solid planetary surface is deformed. NMDCO_relaxed.owl ENVO:01000876 biolink:NamedThing storm A storm is an environmental process in which an environmental system and the processes it participates in are strongly perturbed by external forcings. These forcings typically increase the rates of processes unfolding in the system, relative to their normal rates. NMDCO_relaxed.owl ENVO:01000897 biolink:NamedThing electrostatic discharge process A process during which a sudden flow of electricity occurs, often accompanied by a visible release of photons, between two electrically charged objects due to contact, an electrical short, or dielectric breakdown. NMDCO_relaxed.owl ENVO:01001112 biolink:NamedThing fossilization of organic material A process during which organic substances are replaced with mineral substrances, maintaining part of their anatomical organisation. NMDCO_relaxed.owl ENVO:01001130 biolink:NamedThing gravitational motion A process during which one or more entities move along geodesics in a region of spacetime that has been sufficiently curved towards an entity with sufficient mass and/or energy. NMDCO_relaxed.owl ENVO:01001246 biolink:NamedThing agricultural process A process during which humans rear animals or plants on land for harvest and consumption. NMDCO_relaxed.owl ENVO:01001368 biolink:NamedThing secondary aerosol formation process An aerosol formation process during which solid or liquid particles are either 1) formed in a volume of gas through gas-to-liquid or gas-to-solid conversions or 2) increase in size through aggregation with other particles. NMDCO_relaxed.owl ENVO:01001493 biolink:NamedThing satellite imaging of a planet A remote sensing process during which image data about a planet is generated by sensors mounted on a satellite. NMDCO_relaxed.owl ENVO:01001622 biolink:NamedThing englacial process An environmental system process which occurs within a glacier or ice sheet. NMDCO_relaxed.owl ENVO:01001655 biolink:NamedThing glacial process An environmental process which involves glaciers or ice sheets. NMDCO_relaxed.owl ENVO:01001723 biolink:NamedThing adiabatic process An environmental process during which a system does not thermally interact with its surroundings by virtue of a temperature difference between them. NMDCO_relaxed.owl ENVO:01001795 biolink:NamedThing ecosystem process An environmental process either driven by or primarily impacting the parts or emergent properties of an ecosystem. NMDCO_relaxed.owl ENVO:01001852 biolink:NamedThing energy transfer process A process during which one entity loses energy to another entity. NMDCO_relaxed.owl ENVO:02500003 biolink:NamedThing atmospheric process A process which occurs within an atmosphere. NMDCO_relaxed.owl ENVO:02500008 biolink:NamedThing ecosystem-wide respiration A process which consists of all respiration processes instantiated in an ecosystem. NMDCO_relaxed.owl ENVO:02500027 biolink:NamedThing anthropogenic environmental process An environmental process which is driven by the action of humans. NMDCO_relaxed.owl ENVO:02500030 biolink:NamedThing biogeochemical process A process during which chemicals that are involved in natural ecosystem processes are transported or transformed, and which impact the activity of biological entities NMDCO_relaxed.owl ENVO:02500036 biolink:NamedThing environmental pollution An environmental system process that results in the introduction of contaminants into an environment. NMDCO_relaxed.owl ENVO:03000008 biolink:NamedThing compaction process A physical process during which atoms, molecules, or other consituents of a material entity are forced closer together. NMDCO_relaxed.owl ENVO:03000009 biolink:NamedThing material accumulation process A process during which the mass of one or more materials, present within a given site, increases. NMDCO_relaxed.owl ENVO:03000010 biolink:NamedThing material transport process A process during which material is displaced from its original location and transported either to a new location or back to the original location. NMDCO_relaxed.owl ENVO:03000016 biolink:NamedThing material decumulation process A process during which a mass composed of one or more environmental materials, present within a given site, decreases. NMDCO_relaxed.owl ENVO:03000095 biolink:NamedThing season generating process A process during which the intesity of stellar radiation received by a planet's surface varies in a cyclical regime due to the planet's orbital motion around the barycentre of a planetary system and/or the tilt of its rotational axis relative to its orbital plane. NMDCO_relaxed.owl ENVO:03510003 biolink:NamedThing famine An environmental system process during which populations have reduced access to food, causing increased hunger, malnutrition, and consequent mortality. NMDCO_relaxed.owl ENVO:06105027 biolink:NamedThing fragmentation process An environmental system process during which a material entity breaks into pieces or parts. NMDCO_relaxed.owl ENVO:06105120 biolink:NamedThing entanglement process An environmental system process during which material entities become entrapped, wrapped, twisted, entwined, or otherwise caught in one another. NMDCO_relaxed.owl ENVO:1000748 biolink:NamedThing island formation process A process which results in the formation of an island. NMDCO_relaxed.owl ENVO:01000631 biolink:NamedThing ocean acidification Ocean acidification is a process during which the pH of a sea or ocean is lowered. NMDCO_relaxed.owl ENVO:01000677 biolink:NamedThing earthquake An earthquake is a process during which energy is released in an astronomical body's crust, causing the displacement of crustal parts and the generation of seismic waves. NMDCO_relaxed.owl ENVO:01000690 biolink:NamedThing mass wasting Mass wasting is the geomorphic process by which solid environmental material such as soil, sand, regolith, and/or rock move downslope typically as a mass, largely under the force of gravity, but frequently affected by water and water content as in submarine environments and mudslides. NMDCO_relaxed.owl ENVO:01000694 biolink:NamedThing geological subsidence A material transport process during which a geological surface shifts downward relative to a datum such as sea-level. NMDCO_relaxed.owl ENVO:01000729 biolink:NamedThing atmospheric subsidence A material transport process during which a mass of air moves through an atmosphere towards a planetary surface. NMDCO_relaxed.owl ENVO:01000738 biolink:NamedThing rock-precursor intrusion process A process whereby the precursors of rock, such as magma or sedimentary particles, fill a fracture in a mass of rock. NMDCO_relaxed.owl ENVO:01000875 biolink:NamedThing precipitation process A precipitation process is a process in which a portion of some substance segregates from a material in which that substance or its precursors were dissolved or suspended in and settles due to a force such as gravity or centrifugal force. NMDCO_relaxed.owl ENVO:01001093 biolink:NamedThing tectonic movement A process during which pieces of a planetary crust and uppermost mantle move. NMDCO_relaxed.owl ENVO:01001146 biolink:NamedThing photoevaporation A process during which energetic radiation ionises gas and causes it to disperse away from the ionising source. NMDCO_relaxed.owl ENVO:01001157 biolink:NamedThing atmospheric escape A process during which gases that constitute a planetary atmosphere escape that planet's gravitational field and move away into outer space. NMDCO_relaxed.owl ENVO:01001334 biolink:NamedThing advective transport process A material transport process during which a volume of material is displaced due to a disequilibrium in physical forces and during which 1) the qualities that inhere in that volume and 2) the processes that are unfolding within it are largely unchanged. NMDCO_relaxed.owl ENVO:01001346 biolink:NamedThing erosion An action of exogenic processes (such as water flow or wind) which remove environmental material from one location on the surface of an astronomical body, transporting it to another location where it is deposited. NMDCO_relaxed.owl ENVO:01001367 biolink:NamedThing primary aerosol formation process A material transport process during which solid or liquid particles are directly introduced into a volume of gas. NMDCO_relaxed.owl ENVO:01001759 biolink:NamedThing vibration process A material transport process during which parts of an elastic material oscillate around their positions of equilibrium. NMDCO_relaxed.owl ENVO:01003008 biolink:NamedThing percolation A material transport process during which a fluid is filtered through porous soild or semi-solid materials. NMDCO_relaxed.owl ENVO:01003009 biolink:NamedThing drainage process A material transport process during which a liquid which is not absorbed or otherwise held in place by a material is transported away from its location. NMDCO_relaxed.owl ENVO:01003010 biolink:NamedThing convective transport process A material transport process which arises spontaneously due to physical heterogeneities in a portion of a material and forces which act throughout its volume. NMDCO_relaxed.owl ENVO:01003013 biolink:NamedThing material diffusion process A material transport process during which material moves from a region of higher concentration to a region of lower concentration. NMDCO_relaxed.owl ENVO:02000125 biolink:NamedThing transportation A planned process that is the movement of people, animals and goods from one location to another. NMDCO_relaxed.owl ENVO:03000020 biolink:NamedThing aeolian transport process A material transport process during which one or more environmental materials are transported by the action of wind. NMDCO_relaxed.owl ENVO:03000092 biolink:NamedThing gas emission process A material transport process during which a portion of gaseous environmental material is transported into the atmosphere. NMDCO_relaxed.owl ENVO:1000747 biolink:NamedThing exudation of carbohydrates A process in which carbohydrates are transported from the interior of an organism to its surroundings. NMDCO_relaxed.owl ENVO:01000636 biolink:NamedThing liquid planetary surface NMDCO_relaxed.owl ENVO:01001782 biolink:NamedThing landmass A large continuous area of land, either surrounded by sea or contiguous with another landmass. NMDCO_relaxed.owl ENVO:01000638 biolink:NamedThing planetary crust A planetary crust is the outermost solid shell of a rocky planet or natural satellite, which is chemically distinct from the underlying mantle. NMDCO_relaxed.owl ENVO:01000640 biolink:NamedThing planetary mantle A planetary mantle is a planetary layer which is an interior part of a terrestrial planet or other rocky body large enough to have differentiation by density. NMDCO_relaxed.owl ENVO:01000641 biolink:NamedThing planetary core A planetary core is the innermost structural layer or layers of a planet. The core may be entirely liquid, entirely solid, or have both liquid and solid parts. NMDCO_relaxed.owl ENVO:01000647 biolink:NamedThing asthenosphere An asthenosphere is a layer of a terrestrial-type planet or natural satellite which is highly viscous, mechanically weak, and ductilely deforming. NMDCO_relaxed.owl ENVO:01000748 biolink:NamedThing continental crust A layer of igneous, sedimentary, and metamorphic rocks that forms continents and the areas of shallow seabed close to their shores, known as continental shelves. NMDCO_relaxed.owl ENVO:01000749 biolink:NamedThing oceanic crust Oceanic crust is the uppermost layer of the oceanic portion of a tectonic plate. NMDCO_relaxed.owl ENVO:01000750 biolink:NamedThing Mohorovicic discontinuity The Mohorovicic discontinuity, usually referred to as the Moho, is the boundary between the Earth's crust and the mantle, indicating a change in composition. NMDCO_relaxed.owl ENVO:03600072 biolink:NamedThing ophiolites A planetary structural layer which consists of oceanic crust and the underlying upper mantle and has been uplifted and exposed above sea level. NMDCO_relaxed.owl ENVO:01000642 biolink:NamedThing outer planetary core NMDCO_relaxed.owl ENVO:01000643 biolink:NamedThing inner planetary core NMDCO_relaxed.owl ENVO:01000651 biolink:NamedThing ocean strait An ocean strait is a strait which connects two oceans. NMDCO_relaxed.owl ENVO:01000652 biolink:NamedThing river channel A stream channel which contains a river. NMDCO_relaxed.owl ENVO:01000654 biolink:NamedThing undersea trough An undersea trough is a trough which is below a marine water body. NMDCO_relaxed.owl ENVO:01000655 biolink:NamedThing explosive eruption An explosive eruption is a volcanic process in which pressurised magma is violently expelled and froths into volcanic ash. Explosive eruptions can eject a cloud of rocks, dust, gas, and pyroclastic material which may then collapse, creating a pyroclastic flow of hot volcanic matter. NMDCO_relaxed.owl ENVO:01000656 biolink:NamedThing effusive eruption An effusive eruption is a volcanic eruption during which lava flows onto the ground. NMDCO_relaxed.owl ENVO:01000657 biolink:NamedThing igneous intrusion process A process whereby rising magma cools and solidifies without reaching the surface. Instead, the cooled and solidified igneous mass crystallises within the crust to form an igneous intrusion. NMDCO_relaxed.owl ENVO:01000762 biolink:NamedThing sparsely populated settlement A settlement with a low density of buildings and inhabitants. NMDCO_relaxed.owl ENVO:01000764 biolink:NamedThing formal settlement A settlement which has been established and is managed through officially sanctioned processes and is recognised as legal by a competent authority. NMDCO_relaxed.owl ENVO:01000765 biolink:NamedThing informal settlement A settlement which is not associated with or directed by official planning processes and which typically lacks municipal services and infrastructure such as sanitation, water services, and waste management services. NMDCO_relaxed.owl ENVO:01000766 biolink:NamedThing legal settlement A settlement on land that the inhabitants have a legal claim to. NMDCO_relaxed.owl ENVO:01000767 biolink:NamedThing illegal settlement A settlement on land that the inhabitants have no legal claim to or occupy illegally. NMDCO_relaxed.owl ENVO:01000669 biolink:NamedThing active geological fault An active fault is a fault that is likely to become the source of another earthquake sometime in the future. Geologists commonly consider faults to be active if there has been movement observed or evidence of seismic activity during the last 10,000 years. NMDCO_relaxed.owl ENVO:01001773 biolink:NamedThing thrust fault A fault across which older rocks are pushed above (away from the core of an astronomical body) younger rocks. NMDCO_relaxed.owl ENVO:01000676 biolink:NamedThing contaminated air Contaminated air is air which has sufficient concentrations of environmental pollutants such that it may adversely affect a given ecosystem. NMDCO_relaxed.owl ENVO:01000828 biolink:NamedThing humid air Air which has increased levels of water vapour. NMDCO_relaxed.owl ENVO:01000678 biolink:NamedThing tectonic earthquake An earthquake caused by the sudden release of energy accumulated in an astronomical body's crust, as the elastic strain placed on constituent rock masses causes them to fracture. NMDCO_relaxed.owl ENVO:01000679 biolink:NamedThing megathrust earthquake A megathrust earthquake is a tectonic earthquake which occurs at subduction zones at destructive plate boundaries (convergent boundaries). These interplate earthquakes are the planet's most powerful, with moment magnitudes that can exceed 9.0. NMDCO_relaxed.owl ENVO:01001770 biolink:NamedThing foreshock A tectonic earthquake which precedes the strongest tectonic earthquake in a series, linked to the same release of energy in the crust. NMDCO_relaxed.owl ENVO:01001771 biolink:NamedThing mainshock A tectonic earthquake which 1) is embedded in a series of tectonic earthquakes, linked to the same release of energy in the crust and 2) has the largest magnitude of the series. NMDCO_relaxed.owl ENVO:01001772 biolink:NamedThing aftershock A tectonic earthquake which 1) is embedded in a series of tectonic earthquakes, linked to the same release of energy in the crust and 2) occurs after the mainshock. NMDCO_relaxed.owl ENVO:01001774 biolink:NamedThing blind thrust earthquake A tectonic earthquake which occurs along a thrust fault which does not breach the surface of an astronomical body. NMDCO_relaxed.owl ENVO:01001777 biolink:NamedThing multiplet tectonic earthquake A tectonic earthquake which has two or more mainshocks of similar magnitude, and which originate from the same fracture zone and stress field. NMDCO_relaxed.owl ENVO:01001778 biolink:NamedThing interplate earthquake A tectonic earthquake which occurs at the boundary between two tectonic plates. NMDCO_relaxed.owl ENVO:01001779 biolink:NamedThing intraplate earthquake A tectonic earthquake which occurs within the interior parts of a tectonic plate. NMDCO_relaxed.owl ENVO:01000681 biolink:NamedThing sodium chloride salt A mineral material composed primarily of sodium chloride. NMDCO_relaxed.owl ENVO:01000682 biolink:NamedThing glacial abrasion A glacial abrasion process is an erosional process during which debris in the basal ice scrapes along the bed, polishing and gouging the underlying rocks, similar to sandpaper on wood. NMDCO_relaxed.owl ENVO:03000006 biolink:NamedThing glacial erosion process An erosion process during which the movement of a glacier across a terrestrial surface causes the removal of material from that surface. NMDCO_relaxed.owl ENVO:01000683 biolink:NamedThing glacial plucking Glacial plucking is an erosional process during which pieces of bedrock are cracked off due to the mechanical force of a moving glacier. NMDCO_relaxed.owl ENVO:01000684 biolink:NamedThing glacial ice thrusting Glacial ice thrusting is an erosional process during which a moving glacier which has frozen to its bed surges forward and moves large sheets of sediment frozen to the glacial mass. NMDCO_relaxed.owl ENVO:01000689 biolink:NamedThing tsunami A tsunami is a process during which a series of waves is generated in a water body, typically an ocean or large lake, by the displacement of a large volume of water. Earthquakes, volcanic eruptions and other underwater explosions (including detonations of underwater nuclear devices), landslides, glacier calvings, meteorite impacts and other disturbances above or below water all have the potential to generate a tsunami. NMDCO_relaxed.owl ENVO:01000981 biolink:NamedThing mass liquid flow A process whereby a volume of liquid moves due to a disequilibrium of physical forces. NMDCO_relaxed.owl ENVO:01000730 biolink:NamedThing lava flow process A process in which a volume of lava emitted during an effusive eruption moves along a solid surface. NMDCO_relaxed.owl ENVO:01001342 biolink:NamedThing tidal flow process A water flow process during which movements of water masses caused by varying gravitational and rotational forces from astronomical bodies, combined with the rotation of the astronomical body containing the water mass, cause waters to undergo periodic depth oscillations (tides). NMDCO_relaxed.owl ENVO:01000691 biolink:NamedThing avalanche A mass wasting flow during which snow rapidly flows down a sloping surface. NMDCO_relaxed.owl ENVO:01000696 biolink:NamedThing mass wasting flow A mass wasting flow is a form of mass wasting during which the moving materials behave similarly to a flowing fluid. Water, air and ice are often involved in enabling fluidlike motion of the material. NMDCO_relaxed.owl ENVO:01000697 biolink:NamedThing mudflow A mudflow is a form of mass wasting which involves very rapid to extremely rapid surging flow of debris that has become partially or fully liquified by the addition of significant amounts of water to clay-rich source material. NMDCO_relaxed.owl ENVO:01000698 biolink:NamedThing debris flow A mass wasting flow during which water-laden masses of soil and fragmented rock rush down the slopes of elevations, funnel into stream channels, entrain objects in their paths, and form thick, muddy deposits on valley floors. NMDCO_relaxed.owl ENVO:01000692 biolink:NamedThing landslide process A landslide is a process whereby a large mass of earth and rocks moves down a hill or a mountainside. NMDCO_relaxed.owl ENVO:01000693 biolink:NamedThing rockfall NMDCO_relaxed.owl ENVO:01000695 biolink:NamedThing mudslide NMDCO_relaxed.owl ENVO:01000916 biolink:NamedThing rubbish landslide A mass wasting process during which refuse from human activities, usually accumulated at a dumping site, falls down a slope under the force of gravity. NMDCO_relaxed.owl ENVO:01000917 biolink:NamedThing ice calving process A process during which a part of an ice mass breaks away from the main mass. NMDCO_relaxed.owl ENVO:03000105 biolink:NamedThing slab avalanche A mass wasting process during which slab snow rapidly moves down a sloping surface. NMDCO_relaxed.owl ENVO:01000699 biolink:NamedThing lahar A lahar is a type of mudflow or debris flow composed of a slurry of pyroclastic material, rocky debris, and water. The material flows down from a volcano, typically along a river valley. NMDCO_relaxed.owl ENVO:01000700 biolink:NamedThing sturzstrom A sturzstrom is a landslide consisting which has a great amount of kinetic energy resulting in greater horizontal movement when compared to its initial vertical drop — as much as 20 or 30 times the vertical distance. By contrast a normal landslide will typically travel a horizontal distance that is less than twice the distance that the material has fallen. NMDCO_relaxed.owl ENVO:01001108 biolink:NamedThing rockslide process A rockslide is a process whereby a large mass of rock moves down a hill or a mountainside. NMDCO_relaxed.owl ENVO:01000701 biolink:NamedThing volcanic ash Volcanic ash is an environmental material which consists of fragments of pulverized rock, minerals, and volcanic glass, created during volcanic eruptions and measuring less than 2 millimetres in diameter. Volcanic ash is formed during explosive volcanic eruptions, phreatomagmatic eruptions and during transport in pyroclastic density currents. NMDCO_relaxed.owl ENVO:02000126 biolink:NamedThing wood ash the residue powder that is derived from the combustion of wood. NMDCO_relaxed.owl ENVO:02000127 biolink:NamedThing coal ash Ash that is produced from the burning of coal. NMDCO_relaxed.owl ENVO:01000702 biolink:NamedThing ash fall process An ash fall process is a process in which volcanic ash formed during an explosive volcanic eruption, phreatomagmatic eruption, or during material transport in pyroclastic density currents is pulled towards the planetary surface by gravity. NMDCO_relaxed.owl ENVO:01000703 biolink:NamedThing hydrological precipitation process Hydrological precipitation is a process during which any product of the condensation of atmospheric water vapour is pulled to the planetary surface by gravity. NMDCO_relaxed.owl ENVO:01000725 biolink:NamedThing chemical precipitation process Chemical precipitation is a process in which a portion of some solid substance segregates from a material in which that substance or its precursors were dissolved in and settles due to a force such as gravity or centrifugal force. Segregation may occur due to the solubility limits of the precipitating substance being exceeded or due to a chemical reaction that forms a solid product from aqueous reagents. NMDCO_relaxed.owl ENVO:01000705 biolink:NamedThing soil degradation Soil degradation is a process which results in a change in soil health status resulting in a diminished capacity of the ecosystem in which the soil occurs to provide goods and services for its beneficiaries. NMDCO_relaxed.owl ENVO:02500005 biolink:NamedThing land degradation A process which diminishes the functioning of an ecosystem located on land. NMDCO_relaxed.owl ENVO:02500001 biolink:NamedThing desertification A type of land degradation in which terrestrial ecosystem becomes increasingly dry, typically losing its bodies of water as well as vegetation and wildlife. NMDCO_relaxed.owl ENVO:01000706 biolink:NamedThing soil erosion Soil erosion is a process in which exogenic processes remove soil from one location on the Earth's crust and transport it to another location where it is deposited. NMDCO_relaxed.owl ENVO:02500028 biolink:NamedThing planetary erosion An action of exogenic processes (such as water flow or wind) which remove environmental material from one part of a planet's crust, transporting it to another location where it is deposited. NMDCO_relaxed.owl ENVO:02500029 biolink:NamedThing bedrock dissolution An erosional process in which bedrock is converted from its solid form into a solute by the action of some solvent. NMDCO_relaxed.owl ENVO:03000121 biolink:NamedThing erosion through nivation An erosion process during which rock or soil is removed or degraded due to alternative thawing and freezing of meltwater beneath and at the margins of snowbanks. NMDCO_relaxed.owl ENVO:01000707 biolink:NamedThing coastal flooding Coastal flooding is a process in which normally dry, low-lying land near a coast is flooded by sea water. NMDCO_relaxed.owl ENVO:02500002 biolink:NamedThing flooding A general and temporary condition of partial or complete inundation of normally dry land areas from the overflow of inland and/or tidal waters, and/or the unusual and rapid accumulation or runoff of surface waters from any source. A great flow along a watercourse or a flow causing inundation of lands not normally covered by water. NMDCO_relaxed.owl ENVO:01000708 biolink:NamedThing riverine flooding Riverine flooding is a process in which the flow rate of river water exceeds the capacity of its channel, thus flooding neighbouring land. Bends and meanders in a river channel are particularly disposed to such flooding. NMDCO_relaxed.owl ENVO:01000709 biolink:NamedThing flash flooding Flash flooding is a process in which low-lying land is inundated with water for a short period of time and are usually the result of precipitation or a breach in the container of a water body. NMDCO_relaxed.owl ENVO:01000717 biolink:NamedThing areal flooding Areal flooding is a flooding process in which flat or low-lying areas become inundated with water due to water input exceeding infiltration, evaporation, or run off. NMDCO_relaxed.owl ENVO:01000718 biolink:NamedThing urban flooding Urban flooding is a flooding process in which land or property in a built environment, particularly in more densely populated areas, is inundated due to the rate of water input exceeding that of water drainage provided by the environment's drainage systems. NMDCO_relaxed.owl ENVO:01000711 biolink:NamedThing coastal flood A coastal flood is a flood which is formed as a result of large amounts of water from marine water bodies or large lakes being transported to usually dry land by displacement processes such as high winds or seismic activity. NMDCO_relaxed.owl ENVO:01000712 biolink:NamedThing riverine flood A riverine flood is a flood which is formed as a result of a river's flow rate exceeding the capacity of its channel. NMDCO_relaxed.owl ENVO:01000713 biolink:NamedThing flash flood A flash flood is a flood formed by the rapid flooding of geomorphic low-lying areas. It may be caused by heavy rain associated with a severe thunderstorm, hurricane, tropical storm, or meltwater from ice or snow flowing over ice sheets or snowfields. Flash floods may also occur after the collapse of a natural ice or debris dam, or a human structure such as a man-made dam. Flash floods are distinguished from a regular flood by a timescale of less than six hours. NMDCO_relaxed.owl ENVO:01000714 biolink:NamedThing storm surge A storm surge is a coastal flood which is caused by low-pressure weather systems such as tropical cyclones and strong extratropical cyclones, the severity of which is affected by the shallowness and orientation of the water body relative to storm path, and the timing of tides. NMDCO_relaxed.owl ENVO:01000715 biolink:NamedThing meteotsunami A meteotsunami is a tsunami caused by atmospheric processes and differences in air pressure. NMDCO_relaxed.owl ENVO:01000716 biolink:NamedThing storm surge process A storm surge process is a coastal flooding process which is caused by low pressure weather systems such as tropical cyclones and strong extratropical cyclones, the severity of which is affected by the shallowness and orientation of the water body relative to storm path, and the timing of tides. NMDCO_relaxed.owl ENVO:01000719 biolink:NamedThing snowmelt Snowmelt is a hydrological melting process in which water is produced by the melting of snow and becomes part of the hydrological surface runoff. NMDCO_relaxed.owl ENVO:01000721 biolink:NamedThing icemelt Icemelt is a hydrological melthing process in which water is produced by the melting of ice and becomes part of the hydrological surface runoff. NMDCO_relaxed.owl ENVO:03000099 biolink:NamedThing seasonal melting process A material transformation process during which a material entity melts during a warm season. NMDCO_relaxed.owl ENVO:01000726 biolink:NamedThing desublimation process Desublimation is a process in which a portion of some gas undergoes a phase transition into a portion of some solid. NMDCO_relaxed.owl ENVO:01001548 biolink:NamedThing freezing A material congelation process during which a liquid turns into a solid when its temperature is lowered below its melting point. NMDCO_relaxed.owl ENVO:01000728 biolink:NamedThing tectonic uplift process A tectonic uplift process is a geomorphologic process in which a geological surface shifts upward relative to a datum such as sea-level due to forces other than isostatic responses to unloading. NMDCO_relaxed.owl ENVO:01001094 biolink:NamedThing convergent tectonic movement A process during which pieces of a planetary crust and uppermost mantle move towards one another. NMDCO_relaxed.owl ENVO:01001095 biolink:NamedThing divergent tectonic movement A process during which pieces of a planetary crust and uppermost mantle move away from one another. NMDCO_relaxed.owl ENVO:01001096 biolink:NamedThing transform tectonic movement A process during which pieces of a planetary crust and uppermost mantle move along each other in a predominantly horizontal manner, either in a sinistral (left lateral) or dextral (right lateral) direction. NMDCO_relaxed.owl ENVO:01000740 biolink:NamedThing area of perennial water ice An area of a planet's surface which is primarily composed of water ice, present throughout multiple years, in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000745 biolink:NamedThing area of perennial snow An area of a planet's surface which is primarily composed of snow, present throughout multiple years, in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000742 biolink:NamedThing carbon-bearing gas emission process A carbon emission process is any environmental process which outputs a carbon-bearing gas. NMDCO_relaxed.owl ENVO:03000093 biolink:NamedThing hydrocarbon gas emission process A gas emission process during which a portion of hydrocarbon gas is transported into the atmosphere. NMDCO_relaxed.owl ENVO:03000094 biolink:NamedThing methane gas emission process A hydrocarbon gas emission process during which a portion of methane gas is transported into the atmosphere. NMDCO_relaxed.owl ENVO:01000743 biolink:NamedThing land consumption process A process in which natural ecosystems present over an expanse of land are removed and replaced with anthropogenic ecosystems. NMDCO_relaxed.owl ENVO:01000952 biolink:NamedThing anthropisation A process during which a natural environmental system is altered by human action. NMDCO_relaxed.owl ENVO:01000816 biolink:NamedThing area of deciduous forest An area of a planet's surface which is primarily covered by a forest in which the majority of trees shed foliage simultaneously in response to seasonal change. The surfaces of this area (including the surface of the forest canopy) are in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01001200 biolink:NamedThing anthropised terrestrial environmental zone A terrestrial zone which is bounded by constructed, manufactured, or other anthropogenic material entities. NMDCO_relaxed.owl ENVO:03501237 biolink:NamedThing game reserve A terrestrial environmental zone where wild animals live safely or are hunted in a controlled way for sport. NMDCO_relaxed.owl ENVO:01000755 biolink:NamedThing aeroform A part of an astronomical body which is primarily composed of a continuous volume of gaseous or aerosolised material held in shape by one or more environmental processes. NMDCO_relaxed.owl ENVO:01001645 biolink:NamedThing gaseous part of an atmosphere That part of an atmosphere which is composed of gaseous material. NMDCO_relaxed.owl ENVO:01000760 biolink:NamedThing cloud A cloud is a visible mass of aerosolised liquid droplets or frozen crystals suspended in an atmosphere above the surface of a planetary body. NMDCO_relaxed.owl ENVO:01001009 biolink:NamedThing photometeor A meteor that is primarily composed of light. NMDCO_relaxed.owl ENVO:01001010 biolink:NamedThing hydrometeor A meteor which is primarily composed of water. NMDCO_relaxed.owl ENVO:01000761 biolink:NamedThing polar stratospheric cloud Polar stratospheric clouds are clouds which form in the winter polar stratosphere at altitudes of 15,000–25,000 metres and which support chemical reactions that produce active chlorine and remove gaseous nitric acid, catalysing ozone destruction. NMDCO_relaxed.owl ENVO:01001428 biolink:NamedThing water-based cloud A cloud which is primarily composed of water-based aerosols. NMDCO_relaxed.owl ENVO:01001160 biolink:NamedThing cirrus cloud A cloud which 1) has been shaped into detached fibrous filaments, 2) is almost exclusively composed of ice crystals, 3) is located in the high level of the atmosphere (high étage). NMDCO_relaxed.owl ENVO:01001400 biolink:NamedThing homomutatus cloud An aeroform which is formed as a result of strong upper winds spreading a cirrus homogenitus cloud in the atmosphere and, in turn, causing internal tranformations which result in the cloud taking on the appearnce of natural cirri-form clouds. NMDCO_relaxed.owl ENVO:01001407 biolink:NamedThing cirrocumulus cloud A cloud which 1) has been shaped into structural elements resembling grains or ripples, 2) is almost exclusively composed of ice crystals, 3) is located in the high level of the atmosphere (high étage). NMDCO_relaxed.owl ENVO:01001408 biolink:NamedThing cirrostratus cloud A cloud which 1) occurs in the form of a smooth or fibrous veil, 2) is composed of few small ice crystals, 3) is located in the high level of the atmosphere (high étage). NMDCO_relaxed.owl ENVO:01001409 biolink:NamedThing altocumulus cloud A cloud which 1) has been shaped into laminae, rounded masses or rolls, 2) is exclusively composed of water droplets, 3) is located in the middle level of the atmosphere (middle étage). NMDCO_relaxed.owl ENVO:01001410 biolink:NamedThing altostratus cloud A cloud which 1) occurs in the form of a striated, fibrous, or uniform sheet or layer, 2) is composed of water droplets and ice crystals, 3) is located in the middle level of the atmosphere (middle étage). NMDCO_relaxed.owl ENVO:01001411 biolink:NamedThing nimbostratus cloud A cloud which 1) occurs in the form of a layer, 2) is composed of water droplets (sometimes supercooled) and raindrops, or snow crystals and snowflakes, or of a mixture of these liquid and solid particles, 3) is located in the middle level of the atmosphere (middle étage). NMDCO_relaxed.owl ENVO:01001412 biolink:NamedThing stratocumulus cloud A cloud which 1) has been shaped into non-fibrous tessellations, rounded masses, or rolls, 2) is primarily composed of water droplets, and may contain raindrops or, more rarely, snow pellets, snow crystals and snowflakes, 3) is located in the low level of the atmosphere (low étage). NMDCO_relaxed.owl ENVO:01001413 biolink:NamedThing stratus cloud A cloud which 1) occurs in the form of a layer with a fairly uniform base or, less frequently, ragged patches, 2) is composed of small water droplets, 3) is located in the low level of the atmosphere (low étage). NMDCO_relaxed.owl ENVO:01001414 biolink:NamedThing cumulus cloud A cloud which 1) has been shaped into rising mounds, domes, or towers with a bulging upper part resembling a cauliflower and a near horizontal or ragged base, 2) is mainly composed of water droplets, 3) is located in the low level of the atmosphere (low étage). NMDCO_relaxed.owl ENVO:01001415 biolink:NamedThing homogenitus cloud A cloud which is formed by condensation events triggered by some anthropogenic processes or the outputs thereof, such as aircraft contrails or emissions from chimneys. NMDCO_relaxed.owl ENVO:01001417 biolink:NamedThing silvagenitus cloud A cloud which develop locally over forests as a result of increased humidity due to evaporation and evapotranspiration from the tree canopy. NMDCO_relaxed.owl ENVO:01001419 biolink:NamedThing cumulonimbus cloud A cloud which 1) has been shaped into dense, mountain-like forms or one or more tower-like forms with a flattened upper portion, which often spreads out in the shape of an anvil or plume, 2) is composed of water droplets and, especially in its upper portion, ice crystals, 3) is located in the low level of the atmosphere (low étage), but can extend into the middle and high level of the atmosphere. NMDCO_relaxed.owl ENVO:01000763 biolink:NamedThing rural settlement A settlement which has lower population density than a town, city, or other urban environment and is primarily used for agricultural or pastoral activity. NMDCO_relaxed.owl ENVO:01000769 biolink:NamedThing carbon dioxide emission process A carbon emission process is any environmental process which releases carbon dioxide gas into the atmosphere. NMDCO_relaxed.owl ENVO:01000770 biolink:NamedThing carbon dioxide emission A volume of carbon dioxide gas emitted by a carbon dioxide emission process. NMDCO_relaxed.owl ENVO:01000772 biolink:NamedThing rural area An area which is outside of a town, city, or urban area. Rural areas are primarily used for agriculture or pastoralism and may contain rural settlements. NMDCO_relaxed.owl ENVO:01000883 biolink:NamedThing area of developed open space An area of a planet's surface which is primarily covered by cultivated or anthropically maintained vegetation planted for recreation, erosion control, or aesthetic purposes interspersed by constructed or manufactured objects and materials. This area is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000891 biolink:NamedThing area of pastureland or hayfields An area of a planet's surface which is partly covered by planted grasses, legumes, or mixtures of grass and legumes and used for livestock grazing or the production of seed or hay crops. This area is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01001269 biolink:NamedThing area of developed space An area of a planet's surface which is primarily covered by constructed or manufactured objects and materials, possibly interspersed with cultivated or anthropically maintained vegetation. NMDCO_relaxed.owl ENVO:01000777 biolink:NamedThing nurdle A plastic pellet which is produced such that its size allows it to be rapidly melted and used as input for further downstream manufacturing processes. NMDCO_relaxed.owl ENVO:06105010 biolink:NamedThing plastic pellet A piece of plastic which is 1) hard, 2) has a smooth external surface, and 3) has a roughly spherical or granular shape. NMDCO_relaxed.owl ENVO:01000783 biolink:NamedThing public utility line A utility line which services the public power grid. NMDCO_relaxed.owl ENVO:01000784 biolink:NamedThing illegal informal settlement A populated place where groups of housing units have been constructed on land that the occupants have no legal claim to, or occupy illegally, or where dwellings are not in compliance with current planning and building regulations. NMDCO_relaxed.owl ENVO:01000993 biolink:NamedThing manufacturing process A planned process during which raw or recycled materials are transformed into products for use or sale using labour and machines, tools, chemical and biological processing, or formulation. NMDCO_relaxed.owl ENVO:01000996 biolink:NamedThing human-directed construction process An process during which natural or manufactured materials and products are processed and arranged by humans or their technology into structures. NMDCO_relaxed.owl ENVO:01001436 biolink:NamedThing planned environmental usage process A planned process during which humans access and obtain resources, benefits, or services from a natural or anthropised ecosystem. NMDCO_relaxed.owl ENVO:01001492 biolink:NamedThing satellite imaging A remote sensing process during which image data about an astronomical body or object is generated by sensors mounted on a satellite. NMDCO_relaxed.owl ENVO:01001866 biolink:NamedThing well intervention A planned process during which an oil or gas well is modified. NMDCO_relaxed.owl ENVO:02000007 biolink:NamedThing tissue culture Tissue culture is the culture of cells, tissues or organs in a nutrient medium under sterile conditions. NMDCO_relaxed.owl ENVO:02000146 biolink:NamedThing chemical engineering process A planned process which has the intention of producing, consuming, or transforming materials via the execution of chemical reactions. NMDCO_relaxed.owl ENVO:02500026 biolink:NamedThing anthropogenic modulatory intervention process A process during which humans apply technology to alter the magnitude, duration, rate, or impact of an environmental process. NMDCO_relaxed.owl ENVO:02500041 biolink:NamedThing environmental monitoring An process in which environmental parameters and variables are continually assayed. NMDCO_relaxed.owl ENVO:06105267 biolink:NamedThing soil profile characterization A planned process during which a soil profile is examined and the soil horizons that compose it are described. NMDCO_relaxed.owl ENVO:01000786 biolink:NamedThing fire A fire is a process whereby rapid and exothermic oxidation of a material through a combustion process releases heat, light, and other products. NMDCO_relaxed.owl ENVO:01000839 biolink:NamedThing combustion process Combustion or burning is a high-temperature exothermic redox chemical reaction between a fuel and an oxidant that produces oxidized, often gaseous products, in a mixture termed as smoke. NMDCO_relaxed.owl ENVO:03000090 biolink:NamedThing explosion process A process during which a material entity undergoes a rapid increase in volume, releasing gasses and various forms of energy, often including thermal, light and sound energy. NMDCO_relaxed.owl ENVO:01000787 biolink:NamedThing wildfire A conflagration which is uncontrolled and combusts material in a vegetated area, be it rural or wild. NMDCO_relaxed.owl ENVO:01000788 biolink:NamedThing conflagration A fire which occurs in a large spatial area poses a risk to human life, animal life, health, and/or property. NMDCO_relaxed.owl ENVO:01001287 biolink:NamedThing industrial fire A fire which occurs in an industrial area or building. NMDCO_relaxed.owl ENVO:03000122 biolink:NamedThing planned burn A fire which is planned and executed deliberately under human supervision. NMDCO_relaxed.owl ENVO:01000790 biolink:NamedThing hydrocarbon flame A flame which is produced by the combustion of hydrocarbon fuel. NMDCO_relaxed.owl ENVO:01000791 biolink:NamedThing forest fire A wildfire which occurs in a forest, primarily consuming vegetation as fuel. NMDCO_relaxed.owl ENVO:01001292 biolink:NamedThing land fire A fire which occurs on land, typically consuming a terrestrial ecosystem as fuel. NMDCO_relaxed.owl ENVO:01001289 biolink:NamedThing brush fire A land fire which consumes low-growing plants such as scrub and brush. NMDCO_relaxed.owl ENVO:01001290 biolink:NamedThing bush fire A land fire which occurs in a large uncleared or sparsely settled area (as in Australia) usually scrub-covered or forested. NMDCO_relaxed.owl ENVO:03000131 biolink:NamedThing grass fire A fire which occurs in a grassland, combusting biomass stored in grasses as its primary fuel. NMDCO_relaxed.owl ENVO:01000792 biolink:NamedThing mass gaseous flow A process whereby a large volume of gas moves due to a disequilibrium of physical forces. NMDCO_relaxed.owl ENVO:01001747 biolink:NamedThing mass fluid flow An advective transport process during which a fluid moves. NMDCO_relaxed.owl ENVO:01000796 biolink:NamedThing mass plasma flow A process whereby a large volume of plasma moves due to a disequilibrium of physical forces. NMDCO_relaxed.owl ENVO:01001748 biolink:NamedThing cyclonic circulation A mass fluid flow which moves in the same direction as a planet's rotation, rotating due to a Coriolis effect. NMDCO_relaxed.owl ENVO:01000793 biolink:NamedThing atmospheric wind NMDCO_relaxed.owl ENVO:01000795 biolink:NamedThing planetary wind NMDCO_relaxed.owl ENVO:01000877 biolink:NamedThing atmospheric storm An atmospheric storm is a process in which a portion of an astronomical body's atmosphere is strongly perturbed from its prevaling weather. NMDCO_relaxed.owl ENVO:01000898 biolink:NamedThing atmospheric lightning A sudden electrostatic discharge which occurs during an electrical storm as differentially charged atmospheric entities equalise their charge. NMDCO_relaxed.owl ENVO:01001085 biolink:NamedThing atmospheric aerosol formation An aerosol formation process which occurs in an atmosphere. NMDCO_relaxed.owl ENVO:01001359 biolink:NamedThing atmospheric aerosolised particle formation event An aerosol formation event which occurs in an atmosphere. NMDCO_relaxed.owl ENVO:01001365 biolink:NamedThing atmospheric secondary aerosol formation process A process during which gas-phase molecules form solid or liquid particles that are stable enough to continue growing in size - via the condensation or aggregation of other gas-phase molecules - at a greater rate than their constituents re-enter gas phase. NMDCO_relaxed.owl ENVO:01001399 biolink:NamedThing atmospheric aerosolisation of dust A process during which dust is aerosolised in an atmosphere. NMDCO_relaxed.owl ENVO:01001401 biolink:NamedThing haze formation process An environmental process during which a haze is formed by the aerosolisation of solid particles, including natural materials and anthropogenic pollutants, in an atmosphere. NMDCO_relaxed.owl ENVO:02500004 biolink:NamedThing greenhouse effect A process by which thermal radiation from a planetary surface is absorbed by atmospheric greenhouse gases, and is re-radiated in all directions. Since part of this re-radiation is back towards the surface and the lower atmosphere, it results in an elevation of the average surface temperature above what it would be in the absence of the gases. NMDCO_relaxed.owl ENVO:01000794 biolink:NamedThing stellar wind A stream of plasma primarily composed of electrons, protons, and alpha particles ejected from the upper atmosphere of a star. NMDCO_relaxed.owl ENVO:01000799 biolink:NamedThing astronomical body An object which is naturally occuring, bound together by gravitational or electromagnetic forces, and surrounded by space. NMDCO_relaxed.owl ENVO:01000805 biolink:NamedThing globular star cluster A group of gravitationally bound stars. NMDCO_relaxed.owl ENVO:01000806 biolink:NamedThing nebula An interstellar cloud of dust, hydrogen, helium and other ionized gases NMDCO_relaxed.owl ENVO:01000807 biolink:NamedThing galaxy A galaxy is a gravitationally bound system of stars, stellar remnants, interstellar gas, dust, and dark matter. NMDCO_relaxed.owl ENVO:01001150 biolink:NamedThing protoplanetary disk An astronomical object which is composed of dense gas and dust rotating around a young newly formed star, a T Tauri star, or a Herbig Ae/Be star in a disk-shaped configuration. NMDCO_relaxed.owl ENVO:01000800 biolink:NamedThing planet A planet is an astronomical body orbiting a star or stellar remnant that is massive enough to be rounded by its own gravity, is not massive enough to cause thermonuclear fusion, and has cleared its neighbouring region of planetesimals. NMDCO_relaxed.owl ENVO:01000801 biolink:NamedThing star An astronomical object which is composed primarily of luminous plasma held in a spherical form by gravitational forces. NMDCO_relaxed.owl ENVO:01000802 biolink:NamedThing planetary moon An astronomical body which orbits a planet of comparatively greater mass. NMDCO_relaxed.owl ENVO:01000809 biolink:NamedThing minor planet A minor planet is an astronomical object in direct orbit around the Sun that is neither a planet nor exclusively classified as a comet. Minor planets can be dwarf planets, asteroids, trojans, centaurs, Kuiper belt objects, and other trans-Neptunian objects. NMDCO_relaxed.owl ENVO:01001068 biolink:NamedThing meteoroid An astronomical body which is composed of rocky or metallic materials and is considerably smaller than asteroids. NMDCO_relaxed.owl ENVO:01001129 biolink:NamedThing super-Jupiter An astronomical object which is more massive than the planet Jupiter. NMDCO_relaxed.owl ENVO:01001148 biolink:NamedThing planetesimal An astronomical body which 1) is held together by its own gravity, 2) can attract other, similar bodies through mutual gravitational influence, and 3) has orbital dynamics that are not significantly affected by gas drag. NMDCO_relaxed.owl ENVO:01001149 biolink:NamedThing protoplanet An astronomical object that forms within a protoplanetary disc when planetesimals and other solid debris aggregate and, due to gravitational forces, fuse and initiate internal melting to produce a differentiated interior. NMDCO_relaxed.owl ENVO:01001494 biolink:NamedThing moonmoon NMDCO_relaxed.owl ENVO:01000912 biolink:NamedThing cloud condensation nucleus A solid or liquid particle, usually 0.2 micrometers in diameter, on which water vapour condenses, seeding cloud formation. NMDCO_relaxed.owl ENVO:01001122 biolink:NamedThing gas planet A planet which is primarily composed of hydrogen and helium. NMDCO_relaxed.owl ENVO:01001127 biolink:NamedThing ice giant A giant planet which is primarily composed of elements heavier than hydrogen and helium, volatile chemical compounds with freezing points above about 100 Kelvin. NMDCO_relaxed.owl ENVO:01001688 biolink:NamedThing mass of fluid An object which is composed primarily of a fluid. NMDCO_relaxed.owl ENVO:01000803 biolink:NamedThing asteroid NMDCO_relaxed.owl ENVO:01000808 biolink:NamedThing dwarf planet An astronomical body which is in direct orbit of a star and is massive enough for its own gravity to compress it into a shape preserved by hydrostatic equilibrium (usually a spheroid), but which shares its orbit with other bodies, such as asteroids or comets. NMDCO_relaxed.owl ENVO:01000810 biolink:NamedThing planetary atmosphere An atmosphere which surrounds a planet. NMDCO_relaxed.owl ENVO:01000811 biolink:NamedThing nitrogen-oxygen planetary atmosphere A planetary atmosphere which is composted primarily of dinitrogen and dioxygen gas. NMDCO_relaxed.owl ENVO:01000959 biolink:NamedThing primary atmosphere A planetary atmosphere which is formed as a result of the accretion of gaseous matter from the accretion disc of the planet's star. NMDCO_relaxed.owl ENVO:01000960 biolink:NamedThing secondary atmosphere A planetary atmosphere which has formed as a result of its planet's volcanic activity, or by accumulation of material from comet impacts. NMDCO_relaxed.owl ENVO:01000961 biolink:NamedThing tertiary atmosphere A planetary atmosphere which has formed as a result of biotic processes modifying a secondary atmosphere. NMDCO_relaxed.owl ENVO:01000826 biolink:NamedThing open eaves Overhanging eaves where the rafters and underside of the roof are visible from below. NMDCO_relaxed.owl ENVO:01000827 biolink:NamedThing closed eaves Eaves in which projecting roof members are not visible, being closed from view by boarding. NMDCO_relaxed.owl ENVO:01000829 biolink:NamedThing water vapour saturated air Air which has a partial pressure of water vapour equal or near equal to its equilibrium vapor pressure at a given temperature. NMDCO_relaxed.owl ENVO:01000830 biolink:NamedThing water-based rainfall A hydrological precipitation process in which atmospheric water vapour condenses to form droplets of liquid water massive enough to fall to a planetary surface due to the planet's gravity. NMDCO_relaxed.owl ENVO:01000837 biolink:NamedThing virga NMDCO_relaxed.owl ENVO:01000874 biolink:NamedThing hailfall A hydrological process during which hail stones fall to the surface of an astronomical body. NMDCO_relaxed.owl ENVO:01000895 biolink:NamedThing snowfall A hydrological process in which irregular aggregates of snow fall to the surface of an astronomical body. NMDCO_relaxed.owl ENVO:03400014 biolink:NamedThing precipitation of sleet A hydrological precipitation process during which water falls in both liquid and frozen form. NMDCO_relaxed.owl ENVO:1000745 biolink:NamedThing drought A hydrological precipitation process with a reduced rate relative to some historical average, typically resulting in ecosystemic perturbations. NMDCO_relaxed.owl ENVO:01000831 biolink:NamedThing droplet A droplet is a small column of liquid, bounded completely or almost completely by free surfaces which maintains its shape due to the surface tension of the liquid. NMDCO_relaxed.owl ENVO:01001690 biolink:NamedThing mass of liquid An object which is composed primarily of a liquid. NMDCO_relaxed.owl ENVO:01000832 biolink:NamedThing raindrop A droplet formed by condensation of vapour in an atmosphere and which is sufficiently massive to overcome atmospheric resistance and fall to a planetary surface due to gravity. NMDCO_relaxed.owl ENVO:01000833 biolink:NamedThing water droplet A droplet of water NMDCO_relaxed.owl ENVO:01000835 biolink:NamedThing cloud droplet A droplet which is spherical in shape and suspended in an atmosphere, being of too small a mass to be pulled to a planetary surface by gravity. NMDCO_relaxed.owl ENVO:01000834 biolink:NamedThing water raindrop NMDCO_relaxed.owl ENVO:01000836 biolink:NamedThing water-based cloud droplet A cloud droplet composed primarily of water. NMDCO_relaxed.owl ENVO:03520006 biolink:NamedThing supercooled water droplet A water droplet which exists at temperatures below 0°C (273.15K). NMDCO_relaxed.owl ENVO:01000838 biolink:NamedThing smoke NMDCO_relaxed.owl ENVO:01001652 biolink:NamedThing atmospheric aerosol An aerosol that is suspended in an atmosphere. NMDCO_relaxed.owl ENVO:01000841 biolink:NamedThing pyrolysis A thermolysis process in which organic material is decomposed in the absence of oxygen. NMDCO_relaxed.owl ENVO:01000842 biolink:NamedThing smog A fog which is intermixed with smoke or other combustion products and their derivatives. NMDCO_relaxed.owl ENVO:01000844 biolink:NamedThing fog A visible mass of cloud water droplets or ice crystals suspended in the air at or near the surface of an astronomical body. NMDCO_relaxed.owl ENVO:01001258 biolink:NamedThing vog A fog which is composed of liquid aerosols and gases derived from volcanic gas emissions (primarily sulfur oxides), formed when sulfur-bearing gases react with sunlight, oxygen, and moisture in an atmosphere. NMDCO_relaxed.owl ENVO:03000137 biolink:NamedThing freezing fog A fog the droplets of which freeze upon contact with exposed objects, forming a coating of rime or glaze. NMDCO_relaxed.owl ENVO:01001458 biolink:NamedThing mist A visible mass of water droplets or ice crystals suspended in the air at or near a planetary surface, formed when humid air cools rapidly. NMDCO_relaxed.owl ENVO:01000846 biolink:NamedThing water ice crystal A crystal which is primarily composed of water ice. NMDCO_relaxed.owl ENVO:01000850 biolink:NamedThing clathrate material A material which is primarily composed of a substance arranged as a lattice which can trap or contain other molecules. NMDCO_relaxed.owl ENVO:01000847 biolink:NamedThing hair ice A type of water ice that forms on dead wood with the assistance of the fungus Exidiopsis effusa and takes the shape of fine, silky hair. NMDCO_relaxed.owl ENVO:01001513 biolink:NamedThing permafrost congelation ice Water ice which has formed in a mass of permafrost. NMDCO_relaxed.owl ENVO:03000004 biolink:NamedThing glacial ice Any water ice that is part of a glacier. NMDCO_relaxed.owl ENVO:03000025 biolink:NamedThing erosionally enriched ice Water ice which contains material liberated during an erosion process. NMDCO_relaxed.owl ENVO:03000063 biolink:NamedThing new ice Water ice which is formed from freezing water and is suspended in a water body. NMDCO_relaxed.owl ENVO:01000849 biolink:NamedThing flower-rich field margin strip A flower strip which is present at the margins of cultivated fields. NMDCO_relaxed.owl ENVO:01000851 biolink:NamedThing methane clathrate A clathrate material in which a large amount of methane is trapped within a crystal structure of water, forming a solid similar to ice. NMDCO_relaxed.owl ENVO:01000852 biolink:NamedThing coral bleaching process An environmental process in which coral expels the symbiotic algae living in its tissue as a result of stress, causing the coral to turn white. NMDCO_relaxed.owl ENVO:01001168 biolink:NamedThing ecosystem fragmentation process A process during which one or more parts of an ecosystem become causally isolated such that the direct flow or exchange of materials, resources, and energy between a given fragment and the remainder of the original system is severely curtailed or entirely halted. NMDCO_relaxed.owl ENVO:01001174 biolink:NamedThing ecosystem decay A process during which an ecosystem fragment loses its system integrity, with many of its resident ecological populations 1) losing their habitats, 2) undergoing a loss of functional and phylogenetic diversity, and 3) undergoing a subsequent genetic destabilisation through inbreeding. NMDCO_relaxed.owl ENVO:01001824 biolink:NamedThing ecological succession An ecosystem process during which the species composition of an ecosystem gradually changes as species which are more adapted to the prevailing conditions in the ecosystem replace those which are less adapted. NMDCO_relaxed.owl ENVO:02500012 biolink:NamedThing deforestation An ecosystem process during which the flora and fauna belonging to a forest are removed or destroyed. NMDCO_relaxed.owl ENVO:02500014 biolink:NamedThing forest process NMDCO_relaxed.owl ENVO:02500015 biolink:NamedThing forest area expansion NMDCO_relaxed.owl ENVO:02500018 biolink:NamedThing algal bloom process A process during which the populations in a community of algae in a marine or freshwater ecosystem undergo rapid growth, resulting in high concentrations of algal cells that occur only periodically and briefly in that ecosystem, relative to their concentrations through the majority of the planetary orbital period. NMDCO_relaxed.owl ENVO:02500021 biolink:NamedThing algal bloom collapse A process during which the rapid growth of algal populations that result in an algal bloom ceases, and cell densities begin to fall due to death, predation, and transport. NMDCO_relaxed.owl ENVO:02500022 biolink:NamedThing algal bloom process phase NMDCO_relaxed.owl ENVO:02500023 biolink:NamedThing algal production A process during which the algal cells constituting an algal bloom produce biomass from abiotic components during photosynthesis. NMDCO_relaxed.owl ENVO:01000861 biolink:NamedThing area of dwarf scrub An area of a planet's surface which is partly covered by shrubs with ground-hugging stems or low growth habit, in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000869 biolink:NamedThing area of scrub An area of a planet's surface which is primarily covered by a shrubs, young trees, or stunted trees.. The surfaces of this area are in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000866 biolink:NamedThing photovoltaic system A photovoltaic system is a power system designed to supply usable solar power by means of photovoltaics. It consists of an arrangement of several components, including solar panels to absorb and convert sunlight into electricity, a solar inverter to change the electric current from DC to AC, as well as mounting, cabling and other electrical accessories to set up a working system. NMDCO_relaxed.owl ENVO:01000878 biolink:NamedThing thunderstorm An atmospheric storm which occurs in cumulonimbus clouds and during which lightning and thunder occur. NMDCO_relaxed.owl ENVO:01001294 biolink:NamedThing convective storm An atmospheric storm which is generated by the heating and convection of moist and unstable air masses. NMDCO_relaxed.owl ENVO:01000879 biolink:NamedThing rainstorm An atmospheric storm during which intense rainfall occurs. NMDCO_relaxed.owl ENVO:01000881 biolink:NamedThing snowstorm An atmospheric storm during which intense snowfall occurs. NMDCO_relaxed.owl ENVO:01000882 biolink:NamedThing icestorm An atmospheric storm during which freezing rain falls and accumulates as ice on exposed surfaces. NMDCO_relaxed.owl ENVO:01000904 biolink:NamedThing ground blizzard A ground blizzard is a storm during which snow which has settled on a planetary surface is resuspended in and transported through its atmosphere by strong winds, sustained for several hours. NMDCO_relaxed.owl ENVO:01001296 biolink:NamedThing tropical storm A an atmospheric storm which originates over tropical or subtropical waters and possesses a warm-core, non-frontal synoptic-scale cyclone with a low pressure centre, spiral rain bands and strong winds. NMDCO_relaxed.owl ENVO:01001297 biolink:NamedThing cyclone An atmospheric storm during which a large mass of atmospheric gas rotates around a centre of low atmospheric pressure, generating high winds which spiral towards that centre. NMDCO_relaxed.owl ENVO:01001729 biolink:NamedThing nautical squall A storm which is nautical, localised, and of high severity local storm considered as a whole: that is, winds and cloud mass and (if any) precipitation, thunder and lightning. NMDCO_relaxed.owl ENVO:01001749 biolink:NamedThing wind storm An atmospheric storm during which winds flow with increased rates. NMDCO_relaxed.owl ENVO:01000880 biolink:NamedThing hailstorm An atmospheric storm during which intense hailfall occurs NMDCO_relaxed.owl ENVO:01000884 biolink:NamedThing area of developed space with low usage intensity An area of a planet's surface which is primarily covered by cultivated or anthropically maintained vegetation and by constructed or manufactured objects and materials covering up to approximately half its extent. Such areas are used for low intensity purposes such as accommodating collections of single-family residential units. This area is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000885 biolink:NamedThing area of developed space with medium usage intensity An area of a planet's surface which is primarily covered by constructed or manufactured objects and materials covering from half to three-forths of its extent and by cultivated or anthropically maintained vegetation. Such areas are used for medium intensity purposes such as accommodating dense collections of single-family residential units. This area is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000886 biolink:NamedThing area of developed space with high usage intensity An area of developed space used for high intensity purposes such as accommodating dense and multi-occupant residential, commercial, and industrial units. This area is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:03501236 biolink:NamedThing business park An area of developed space which is reserved for office buildings. NMDCO_relaxed.owl ENVO:01000893 biolink:NamedThing area of woody wetland An area of a planet's surface which is partly covered by forest or shrubland vegetation and where the underlying soil or substrate is periodically saturated with or covered by water. This area is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01000894 biolink:NamedThing area of emergent herbaceous wetland An area of a planet's surface which is primarily covered by perennial herbaceous vegetation and where the underlying soil or substrate is periodically saturated with or covered by water. This area is in contact with an atmospheric column extending from the planetary boundary layer to the planet's exosphere with little to no physical obstruction. NMDCO_relaxed.owl ENVO:01001208 biolink:NamedThing swamp area An area of wetland which overlaps a swamp ecosystem. NMDCO_relaxed.owl ENVO:01000896 biolink:NamedThing freezing rainfall Water-based rainfall which freezes either 1) on impact with a surface to form a coating of clear ice (glaze) or 2) after percolating through surface layers. NMDCO_relaxed.owl ENVO:03000127 biolink:NamedThing acid rainfall A water-based rainfall process during which water droplets with increased acidity fall towards a planetary surface. NMDCO_relaxed.owl ENVO:01000899 biolink:NamedThing intercloud lightning A lightning process during which electrostatic discharge occurs between at least two clouds. NMDCO_relaxed.owl ENVO:01000902 biolink:NamedThing lightning flash A lightning process during which electrostatic discharge occurs within a single cloud or between multiple clouds. NMDCO_relaxed.owl ENVO:01000900 biolink:NamedThing intracloud lightning A lightning process during which electrostatic discharge occurs within a single cloud. NMDCO_relaxed.owl ENVO:01000901 biolink:NamedThing lightning strike A lightning process during which electrostatic discharge occurs between a cloud and an object on a planetary surface, or a planetary surface itself. NMDCO_relaxed.owl ENVO:01000903 biolink:NamedThing blizzard A blizzard is a severe snowstorm during which snowfall is transported by strong winds, sustained for several hours. NMDCO_relaxed.owl ENVO:03400007 biolink:NamedThing lake-effect snow storm A snowstorm during which intense lake-effect snowfall occurs. NMDCO_relaxed.owl ENVO:01000906 biolink:NamedThing aquaculture process A process during which humans rear animals or plants in bodies of water for harvest and consumption. NMDCO_relaxed.owl ENVO:01001431 biolink:NamedThing land use process An anthropogenic environmental process which includes all human activities undertaken in a natural, semi-natural, or anthropised environment. NMDCO_relaxed.owl ENVO:01001437 biolink:NamedThing mining A planned environmental usage process during which a non-renewable resource such as petroleum, natural gas, or water is extracted from an ecosystem. NMDCO_relaxed.owl ENVO:01001443 biolink:NamedThing usage of an environment for recreation A planned environmental usage process during which humans access an environment in order to promote the refreshment of their physical and psychological health through relaxation and leisure activities. NMDCO_relaxed.owl ENVO:01001444 biolink:NamedThing usage of an environment for transportation A planned environmental usage process during which an environment facilitates the movement of materials and material objects (persons or goods) from place to place, typically with the assistance of a vehicle. NMDCO_relaxed.owl ENVO:01001445 biolink:NamedThing usage of an environment for infrastructure and utilities A planned environmental usage process during which an environment supports 1) enterprises concerned with the provision to the public of essentials, such as electricity or water or 2) the basic network or foundation of capital facilities or community investments which are necessary to support economic and community activities. NMDCO_relaxed.owl ENVO:01001446 biolink:NamedThing usage of an environment for residential activity A planned environmental usage process during which an environment supports the settlement and dwelling of a community of humans. NMDCO_relaxed.owl ENVO:01001447 biolink:NamedThing usage of an environment for community and social services A planned environmental usage process during which an environment supports welfare activities organised by the state or a local authority and carried out by trained personnel. NMDCO_relaxed.owl ENVO:01001448 biolink:NamedThing usage of an environment for retail activity A planned environmental usage process during which an environment supports the sale of goods to ultimate consumers, usually in small quantities. NMDCO_relaxed.owl ENVO:01001449 biolink:NamedThing usage of an environment for defence A planned environmental usage process during which an environment supports activities which aim to protect citizens or any geographical area by preparing for or by using military means to resist the attack of an enemy. NMDCO_relaxed.owl ENVO:01001450 biolink:NamedThing usage of an environment for industry A planned environmental usage process during which an environment supports manufacturing facilities producing commodities that are sold with the expectation of recovering the total cost of production. NMDCO_relaxed.owl ENVO:01001451 biolink:NamedThing usage of an environment for business A planned environmental usage process during which an environment supports facilities associated with commerce or the earning of a livelihood through means other than manufacturing or the provision of a public service. NMDCO_relaxed.owl ENVO:06105113 biolink:NamedThing fishing A planned environmental usage process during which any number of fish are caught by humans or their technologies. NMDCO_relaxed.owl ENVO:01000907 biolink:NamedThing feasting pit site An archeological site which contains holes humans had dug in the ground, or their remnants, for the purpose of storing and distributing food, drink, and both functional or ritualistic implements during communal eating and drinking. NMDCO_relaxed.owl ENVO:01000914 biolink:NamedThing ice ablation zone An environmental zone which overlaps a glacier or an ice sheet, and in which ice loss exceeds ice gain. NMDCO_relaxed.owl ENVO:01001351 biolink:NamedThing ice decumulation zone A material decumulation zone in which the rates of ice formation processes are below those of ice decumulation processes, leading to a net decrease in some mass of ice. NMDCO_relaxed.owl ENVO:01000915 biolink:NamedThing ice loss process A material decumulation process during which the mass of an existing ice mass decreases in size. NMDCO_relaxed.owl ENVO:01000919 biolink:NamedThing glacial ice ablation process An ice loss process which occurs in the low-altitude area of a glacier or ice sheet below the firn layer. NMDCO_relaxed.owl ENVO:01001656 biolink:NamedThing glacial retreat A glacial ice loss process during which the snout (toe) of a glacier shrinks following successive years of negative mass balance. NMDCO_relaxed.owl ENVO:01000922 biolink:NamedThing animal cage A manufactured cage which may be used to confine, contain, or protect an animal. NMDCO_relaxed.owl ENVO:01000923 biolink:NamedThing petting zoo A petting zoo is a zoological garden which contains domesticated non-human animals and some wild non-human animals that are docile enough for humans to touch and feed. NMDCO_relaxed.owl ENVO:01000928 biolink:NamedThing fish processing building A building in which fish are subject to a series of operations to prepare them for human consumption. NMDCO_relaxed.owl ENVO:01000929 biolink:NamedThing mushroom environment NMDCO_relaxed.owl ENVO:01001306 biolink:NamedThing bone element environment An environment which is determined by a bone element. NMDCO_relaxed.owl ENVO:08000001 biolink:NamedThing axilla skin environment An environment that is determined by an axilla skin. NMDCO_relaxed.owl ENVO:08000002 biolink:NamedThing mouth environment An environment that is determined by a mouth. NMDCO_relaxed.owl ENVO:2100002 biolink:NamedThing intestine environment An environmental system determined by an intestine. NMDCO_relaxed.owl ENVO:2100003 biolink:NamedThing skin environment An environment determined by an area or zone of skin tissue. NMDCO_relaxed.owl ENVO:2100004 biolink:NamedThing integumental system environment NMDCO_relaxed.owl ENVO:2100005 biolink:NamedThing face skin environment NMDCO_relaxed.owl ENVO:2100006 biolink:NamedThing feather environment NMDCO_relaxed.owl ENVO:01000931 biolink:NamedThing migration path An ecological corridor through which organisms move during a migration process. NMDCO_relaxed.owl ENVO:01000933 biolink:NamedThing residential building A human house which serves as a long-term shelter for its inhabitants and within which they store personal property. NMDCO_relaxed.owl ENVO:01000936 biolink:NamedThing dedicated campground A campground which has been modified by humans to provide and maintain facilities for camping such as fire pits, road access, latrines, and garbage bins. NMDCO_relaxed.owl ENVO:01000937 biolink:NamedThing impromptu campground A campground which has no pre-existing facilities installed or maintained by humans, usually found outside of anthropised ecosystems. NMDCO_relaxed.owl ENVO:01000941 biolink:NamedThing planetary subsurface zone Regions of a planet which are not exposed to the planet's atmosphere or space, often comprising parts of one or more planetary structural layers. NMDCO_relaxed.owl ENVO:01000942 biolink:NamedThing continental subsurface zone A region which overlaps parts of one or more planetary structural layers which are located below a continental landmass. NMDCO_relaxed.owl ENVO:01001045 biolink:NamedThing oceanic subsurface zone A region which overlaps parts of one or more planetary structural layers which are located below an oceanic plate. NMDCO_relaxed.owl ENVO:01000944 biolink:NamedThing microplastic particle A piece of plastic which has a diameter less than five millimetres. NMDCO_relaxed.owl ENVO:06105006 biolink:NamedThing piece of plastic foam A piece of plastic which has a matrix- or sponge-like structure with numerous, hollow internal spaces. NMDCO_relaxed.owl ENVO:06105007 biolink:NamedThing plastic film A piece of plastic which is flexible, thin, and planar. NMDCO_relaxed.owl ENVO:06105008 biolink:NamedThing plastic fragment A piece of plastic which 1) is hard, 2) has an irregular shape, and 3) has broken off of a larger piece of plastic. NMDCO_relaxed.owl ENVO:06105009 biolink:NamedThing plastic line A piece of plastic which is linear and flexible. NMDCO_relaxed.owl ENVO:06105102 biolink:NamedThing megaplastic particle A piece of plastic which is greater than 1 metre in its longest dimension. NMDCO_relaxed.owl ENVO:06105103 biolink:NamedThing macroplastic particle A piece of plastic which is between 25 and 1000 millimetres in its longest dimension. NMDCO_relaxed.owl ENVO:06105104 biolink:NamedThing mesoplastic particle A piece of plastic which is between 5 and 25 millimetres in its longest dimension. NMDCO_relaxed.owl ENVO:06105105 biolink:NamedThing nanoplastic particle A piece of plastic which has a diameter less than 1 micrometre. NMDCO_relaxed.owl ENVO:01000945 biolink:NamedThing primary microplastic particle A microplastic particle which is the direct output of a manufacturing process. NMDCO_relaxed.owl ENVO:01000946 biolink:NamedThing secondary microplastic particle A microplastic particle which is derived from the breakdown of larger plastic debris. NMDCO_relaxed.owl ENVO:01000948 biolink:NamedThing polar tree-line ecotone An ecotone which bridges a subpolar coniferous forest biome and a tundra biome. NMDCO_relaxed.owl ENVO:01000953 biolink:NamedThing tree line ecotone An ecotone which overlaps at least one biome which supports the growth and persistence of trees and at least one that does not. Before ceasing altogether, tree growth becomes sparse and trees appear stunted as conditions become less favourable along this ecotone. NMDCO_relaxed.owl ENVO:01000955 biolink:NamedThing desert tree line ecotone A tree line ecotone across which trees cease to grow due to insufficient water availability due to a lack of water-based precipitation. NMDCO_relaxed.owl ENVO:01000957 biolink:NamedThing double tree line ecotone A tree line ecotone which contains gaps in tree coverage due to decreased biodiversity in tree-forming plant species: gaps are above the alpine tree line for some species yet below the desert tree line for others, and no species with intermediate tolerances are present. NMDCO_relaxed.owl ENVO:01001434 biolink:NamedThing anthropogenic ecosystem conversion process A process during which an ecosystem - natural or anthropised - is changed by the actions of humans. NMDCO_relaxed.owl ENVO:01000956 biolink:NamedThing desert-alpine tree line ecotone A tree line ecotone across which trees cease to grow due to insufficient water availability caused by exposure to increased solar radiation and a lack of rainfall. NMDCO_relaxed.owl ENVO:01000958 biolink:NamedThing terrestrial planet A planet that is composed primarily of silicate rocks or metals. NMDCO_relaxed.owl ENVO:01001136 biolink:NamedThing ocean planet A planet which has a surface layer that nearly completely or completely covered by water, and which has a substantial portion of its mass composed of water. NMDCO_relaxed.owl ENVO:01001137 biolink:NamedThing ice planet A planet which has a surface layer that nearly completely or completely covered by ice, and which has a substantial portion of its mass composed of ice. NMDCO_relaxed.owl ENVO:01001143 biolink:NamedThing lava planet A planet which has a surface layer that nearly completely or completely covered by lava, and which has a substantial portion of its mass composed of lava. NMDCO_relaxed.owl ENVO:01001145 biolink:NamedThing chthonian planet A planet which is formed as a result of a gas giant's hydrogen and helium atmosphere, as well as its outer layers, being stripped away by a stellar wind through photoevaporation and hydrodynamic escape. NMDCO_relaxed.owl ENVO:01001152 biolink:NamedThing mesoplanet A planet which is smaller than Mercury but larger than Ceres. NMDCO_relaxed.owl ENVO:01001153 biolink:NamedThing circumbinary planet A planet which orbits two stars. NMDCO_relaxed.owl ENVO:01000966 biolink:NamedThing private swimming pool A constructed swimming pool which is owned by a non-governmental legal entity or a collective of such entities. NMDCO_relaxed.owl ENVO:01000967 biolink:NamedThing public swimming pool A constructed swimming pool which is owned by a governmental or state entity. NMDCO_relaxed.owl ENVO:01000969 biolink:NamedThing cafeteria A building which provides the site for food services with little or no waiting staff furnishing table service. NMDCO_relaxed.owl ENVO:01000972 biolink:NamedThing take-out restaurant A restaurant which provides prepared meals or other food products that the purchaser must eat off its premises. NMDCO_relaxed.owl ENVO:03501221 biolink:NamedThing bistro A restaurant which is of French cultural origin and which has a short menu and limited seating space. NMDCO_relaxed.owl ENVO:03501222 biolink:NamedThing brasserie A type of restaurant which is of French cultural origin and which provides more service or food variety than a bistro. NMDCO_relaxed.owl ENVO:03501224 biolink:NamedThing carvery A restaurant which provides customers with cooked meat freshly sliced to order. NMDCO_relaxed.owl ENVO:03501225 biolink:NamedThing coffeehouse A restaurant which primarily serves coffee. NMDCO_relaxed.owl ENVO:03501226 biolink:NamedThing greasy spoon A restaurant which is small, inexpensive, and typically specializing in fried foods and/or home-cooked meals. NMDCO_relaxed.owl ENVO:03501227 biolink:NamedThing steakhouse A restaurant which specializes in serving steaks and pork chops. NMDCO_relaxed.owl ENVO:03501228 biolink:NamedThing trattoria A restaurant which is of Italian cultural origin and which is generally less formal than an Italian ristorante, but more formal than an osteria. NMDCO_relaxed.owl ENVO:01000970 biolink:NamedThing delicatessen A food shop which sells a selection of food products that are not typical dietary components of the human population it is co-located with. NMDCO_relaxed.owl ENVO:01000984 biolink:NamedThing grocery store A food shop in which food products are the primary offer for sale or trade. NMDCO_relaxed.owl ENVO:01000974 biolink:NamedThing food kiosk A kiosk from which food products are sold. NMDCO_relaxed.owl ENVO:01000976 biolink:NamedThing pitfall trap An animal trap which consists of a container set flush with the ground such that animals moving along the ground may fall in and be available for examination or collection. NMDCO_relaxed.owl ENVO:01000977 biolink:NamedThing dry pitfall trap A pitfall trap in which a glass, plastic, or metal container devoid of accumulations of any liquid is used to contain any animal that falls inside. NMDCO_relaxed.owl ENVO:01000978 biolink:NamedThing wet pitfall trap A pitfall trap in which the container used to hold trapped animals is filled with a liquid solution formulated to hold, kill, and preserve any animal or animals which falls within it. NMDCO_relaxed.owl ENVO:01000979 biolink:NamedThing channel of an intermittent river A channel of an intermittent stream which contains a river when water supply exceeds evapotranspiration and bed seepage. NMDCO_relaxed.owl ENVO:01000988 biolink:NamedThing ethnic food shop A food shop in which the food products on offer are restricted to those produced in a region and cultural setting other than that of the shop's locality. NMDCO_relaxed.owl ENVO:03501290 biolink:NamedThing supermarket A self-service shop offering a wide variety of food, beverages and household products, organized into sections. NMDCO_relaxed.owl ENVO:01000986 biolink:NamedThing agricultural fairground A fairground which is used to exhibit agricultural technology, livestock, and farm-related activity. NMDCO_relaxed.owl ENVO:01001170 biolink:NamedThing active ecosystem management process A process during which an ecosystem, its parts, or the processes it participates in are modified by human intervention to accomplish an objective. NMDCO_relaxed.owl ENVO:01001260 biolink:NamedThing waste disposal process A process during which materials deemed to be waste are transported away from a site. NMDCO_relaxed.owl ENVO:01001435 biolink:NamedThing planned deforestation Deforestation which is planned and executed by humans. NMDCO_relaxed.owl ENVO:01001500 biolink:NamedThing anthropogenic light pollution A pollution process during which artificial light with wavelengths in the visible spectrum is released into the environment. NMDCO_relaxed.owl ENVO:06105108 biolink:NamedThing littering An anthropogenic environmental process during which waste is improperly disposed of into the environment. NMDCO_relaxed.owl ENVO:06105114 biolink:NamedThing ghost fishing An anthropogenic environmental process during which abandoned, lost, or discarded fishing gear attracts and entangles organisms. NMDCO_relaxed.owl ENVO:2000012 biolink:NamedThing anthropogenic generation of energy The generation of energy for use by humans NMDCO_relaxed.owl ENVO:01000994 biolink:NamedThing planetary manufacturing process A manufacturing process which occurs on a planet. NMDCO_relaxed.owl ENVO:06105125 biolink:NamedThing plastic manufacturing process A manufacturing process which includes plastic as one of its specified outputs. NMDCO_relaxed.owl ENVO:01000995 biolink:NamedThing dry river A dry stream channel through which a river had flowed, but now contains no appreciable accumulations of water. NMDCO_relaxed.owl ENVO:01001004 biolink:NamedThing groundwater Underground water which is located in pore spaces found in rock or unconsolidated deposits such as soil, clay, or gravel. NMDCO_relaxed.owl ENVO:01001005 biolink:NamedThing lunar rainbow A lunar rainbow is a rainbow produced by the refraction of light, which has been reflected from a moon's surface, by water droplets in an astronomical body's atmosphere. NMDCO_relaxed.owl ENVO:01001006 biolink:NamedThing rainbow A rainbow is a photometeor which consists of a spectral separation of light, formed as a result of the reflection, refraction, and dispersion of light in water droplets suspended in an astronomical body's atmosphere. NMDCO_relaxed.owl ENVO:01001007 biolink:NamedThing solar rainbow A solar rainbow is a rainbow produced by the refraction of light. which has been emitted by a star, by water droplets in the atmosphere of an astronomical body. NMDCO_relaxed.owl ENVO:01001013 biolink:NamedThing reflection rainbow A rainbow which forms from sunlight which has been reflected off a body of water prior to its interaction with water droplets in an atmosphere. NMDCO_relaxed.owl ENVO:01001015 biolink:NamedThing fogbow A rainbow which forms through the interaction of sunlight with the water droplets which constitute fog or clouds; light is diffracted by these droplets such that the photometeor appears almost white with faint reds on the sky-facing side and faint blues on the planet-facing side of the bow. NMDCO_relaxed.owl ENVO:01001011 biolink:NamedThing light emitted by lightning A photometeor which is formed as a result of sudden electrostatic discharge in the atmosphere. NMDCO_relaxed.owl ENVO:01001016 biolink:NamedThing glory A photometeor which is formed by wave interference of light refracted within water droplets which constitute mist or clouds and consists of one or more concentric, successively dimmer rings, each of which has red wavelengths distant to the glory's centre and blue wavelengths towards the centre. NMDCO_relaxed.owl ENVO:01001017 biolink:NamedThing halo A photometeor which is produced by light that is reflected, refracted, and dispersed by ice crystals, capable of acting as prisms and mirrors, suspended in an astronomical body's atmosphere. NMDCO_relaxed.owl ENVO:01001014 biolink:NamedThing monochrome solar rainbow A solar rainbow which is formed by a narrow band of wavelengths, the rest of the spectrum having been scattered away by an atmosphere. NMDCO_relaxed.owl ENVO:01001018 biolink:NamedThing hypereutrophic water Water which has a very high concentration of nutrients. NMDCO_relaxed.owl ENVO:01001019 biolink:NamedThing hypereutrophic lake A lake which is composed primarily of water with very high nutrient concentrations. NMDCO_relaxed.owl ENVO:01001023 biolink:NamedThing radiation A process during which energy is emitted or transmitted in the form of waves or particles through space or a material medium. NMDCO_relaxed.owl ENVO:01001763 biolink:NamedThing impact event An impact event is a collision between material entities, resulting in changes in one or both of those entities. NMDCO_relaxed.owl ENVO:01001767 biolink:NamedThing structural collapse process A process during which the ability of a material entity to maintain its internal organisation fails, resulting in deformation and a breakdown of that organisation. NMDCO_relaxed.owl ENVO:01001842 biolink:NamedThing momentum transfer process An environmental process during which momentum is transferred from one material entity to another. NMDCO_relaxed.owl ENVO:01003014 biolink:NamedThing irradiation An energy transfer process during which a material entity receives energy through radiation. NMDCO_relaxed.owl ENVO:01001024 biolink:NamedThing particle radiation A radiation process during which energy is transmitted or emitted by means of fast-moving subatomic particles. NMDCO_relaxed.owl ENVO:01001026 biolink:NamedThing electromagnetic radiation A radiation process during which waves (or their quanta, photons) of the electromagnetic field propagate (radiate) through space carrying electromagnetic energy. NMDCO_relaxed.owl ENVO:01001027 biolink:NamedThing acoustic radiation A radiation process during which mechanical waves generated by oscillations radiate through an environmental material. NMDCO_relaxed.owl ENVO:01001734 biolink:NamedThing insolation process A process during which direct stellar radiation interacts with a planetary surface. NMDCO_relaxed.owl ENVO:01001025 biolink:NamedThing particle beam radiation A particle radiation process during which subatomic particles move in the same direction. NMDCO_relaxed.owl ENVO:01001047 biolink:NamedThing non-saline planetary subsurface environment An environmental system which has its properties and dynamics determined by those parts of a planetary subsurface zone which are not saline. NMDCO_relaxed.owl ENVO:01001049 biolink:NamedThing non-saline sediment environment An environmental system which has its properties and dynamics determined by sediment permeated by non-saline water. NMDCO_relaxed.owl ENVO:01001050 biolink:NamedThing saline sediment environment An environmental system which has its properties and dynamics determined by sediment permeated by saline water. NMDCO_relaxed.owl ENVO:01001054 biolink:NamedThing non-saline aerosol environment An environmental system which has its properties and dynamics determined by an aerosol with a low concentration of dissolved solutes. NMDCO_relaxed.owl ENVO:01001059 biolink:NamedThing mock community culture A cell culture which is composed of a microbial community of known composition. NMDCO_relaxed.owl ENVO:01001060 biolink:NamedThing single strain cell culture A cell culture which is composed of a single population of bacterial or archaeal cells. NMDCO_relaxed.owl ENVO:01001061 biolink:NamedThing caldera lake A lake which is contained within a caldera. NMDCO_relaxed.owl ENVO:01001065 biolink:NamedThing meteorite lake A lake which is contained in a crater formed by a meteorite impact. NMDCO_relaxed.owl ENVO:01001066 biolink:NamedThing impact between astronomical bodies An impact event is a collision between astronomical bodies. NMDCO_relaxed.owl ENVO:01001067 biolink:NamedThing meterorite impact An impact event during which a meteoroid collides with another astronomical body. NMDCO_relaxed.owl ENVO:01001078 biolink:NamedThing weather Environmental variability which inheres in an astronomical body part or in outer space. NMDCO_relaxed.owl ENVO:01001079 biolink:NamedThing atmospheric weather Weather which inheres in an atmosphere. NMDCO_relaxed.owl ENVO:01001080 biolink:NamedThing space weather Weather which inheres in outer space. NMDCO_relaxed.owl ENVO:01001394 biolink:NamedThing accumulation of matter on aerosolised particles NMDCO_relaxed.owl ENVO:01001617 biolink:NamedThing snow accumulation process A material accumulation process during which the mass of snow on a surface increases. NMDCO_relaxed.owl ENVO:01001856 biolink:NamedThing liquid accumulation process A material accumulation process during which the volume of liquid entity increases. NMDCO_relaxed.owl ENVO:03000036 biolink:NamedThing sedimentation in a water body A material accumulation process during which solid particles are pulled through a water body by gravitation or centrifugal force and which ends when they settle on a solid surface. NMDCO_relaxed.owl ENVO:03000054 biolink:NamedThing depositional process A process during which material entities are added to a landform or to a feature upon the landform. NMDCO_relaxed.owl ENVO:04000015 biolink:NamedThing carbon sequestration process A material accumulation process during which atmospheric carbon dioxide is captured and stored. NMDCO_relaxed.owl ENVO:06105021 biolink:NamedThing adsorption A material accumulation process during which material adheres to a solid or liquid surface. NMDCO_relaxed.owl ENVO:06105022 biolink:NamedThing fouling A material accumulation process during which material builds up on a solid surface such that a function of that surface, or the object it is a part of, is impaired. NMDCO_relaxed.owl ENVO:01001086 biolink:NamedThing formation of a solid aerosol in an atmosphere A process during which an aerosol, consisting of solid particulates suspended in a gas, is formed in an atmosphere. NMDCO_relaxed.owl ENVO:01001087 biolink:NamedThing formation of a liquid aerosol in an atmosphere A process during which an aerosol, consisting of droplets of liquid suspended in gas, is formed in an atmosphere. NMDCO_relaxed.owl ENVO:01001090 biolink:NamedThing formation of a solid aerosol from gaseous material in an atmosphere A process during which microscopic solid particulates are formed from gaseous materials in an atmosphere. NMDCO_relaxed.owl ENVO:01001639 biolink:NamedThing formation of a solid aerosol from liquid material in an atmosphere A process during which microscopic solid particulates are formed from liquid materials in an atmosphere. NMDCO_relaxed.owl ENVO:01001091 biolink:NamedThing formation of a liquid aerosol from gaseous material in an atmosphere A process during which microscopic liquid droplets are formed from gaseous materials in an atmosphere. NMDCO_relaxed.owl ENVO:01001099 biolink:NamedThing divergent plate boundary A geomorphological feature which is formed where two or more tectonic plates are actively moving away from one another, resulting in deformation of the lithosphere that forms rifts or ridges. NMDCO_relaxed.owl ENVO:01001100 biolink:NamedThing convergent plate boundary A geomorphological feature which is formed where two or more tectonic plates are actively moving towards one another, resulting in deformation of the lithosphere that forces one plate below the other where it melts in the mantle. NMDCO_relaxed.owl ENVO:01001101 biolink:NamedThing transform plate boundary A geomorphological feature which is formed where two or more tectonic plates are actively moving along one another in either a sinistral (left lateral) or dextral (right lateral) horizontal direction. NMDCO_relaxed.owl ENVO:01001102 biolink:NamedThing tectonic plate subduction A convergent tectonic movement process during which one plate moves under another and is forced or sinks due to gravity into a mantle. NMDCO_relaxed.owl ENVO:01001107 biolink:NamedThing rockslide lake A lake which fills a depression where drainage is blocked by solid material transported by a rockslide. NMDCO_relaxed.owl ENVO:01001123 biolink:NamedThing dwarf gas planet A gas planet which 1) is considerably smaller than a gas giant and 2) has a rocky core around which a thick envelope primarily composed of hydrogen, helium, and smaller proportions of volatiles. NMDCO_relaxed.owl ENVO:01001124 biolink:NamedThing giant gas planet A gas planet which has mass and size comparable to Jupiter and Saturn. NMDCO_relaxed.owl ENVO:01001128 biolink:NamedThing mini-Neptune A gas planet which has an atmosphere composed of hydrogen and helium - probably with deep layers of ice, rock or liquid oceans (made of water, ammonia, a mixture of both, or heavier volatiles) - and a small core made of low-density volatiles. NMDCO_relaxed.owl ENVO:01001132 biolink:NamedThing hot Neptune A gas planet which has a mass similar to that of Neptune or Uranus and which closely orbits its star (normally at a distance less than 1 Astronomical Unit). NMDCO_relaxed.owl ENVO:01001147 biolink:NamedThing helium planet A gas planet which has an atmosphere composed primarily of helium. NMDCO_relaxed.owl ENVO:01001126 biolink:NamedThing astrogeological ice An astrogeological volatile which is composed primarily of chemical compounds with freezing points above an approximate threshold of 100 Kelvin. NMDCO_relaxed.owl ENVO:01001155 biolink:NamedThing astrogeological gas An astrogeological volatile which is composed primarily of chemical compounds with boiling points around those of hydrogen and helium. NMDCO_relaxed.owl ENVO:01001131 biolink:NamedThing hot Jupiter A giant gas planet which has a jovian-scale mass (0.36–11.8 Jupiter masses), a short orbital period (1.3–111 Earth days), and which is close to the star it orbits, resulting in extreme and exotic atmospheric properties. NMDCO_relaxed.owl ENVO:01001133 biolink:NamedThing mega-Earth A terrestrial exoplanet which is at least ten times the mass of Earth. NMDCO_relaxed.owl ENVO:01001134 biolink:NamedThing super-Earth A terrestrial planet which has a mass higher than Earth's, but substantially below the masses of Uranus and Neptune (15 and 17 Earth masses, respectively). NMDCO_relaxed.owl ENVO:01001135 biolink:NamedThing desert planet A terrestrial planet which has a surface dominated by hot deserts. NMDCO_relaxed.owl ENVO:01001142 biolink:NamedThing iron planet A planet which in primarily composed of an iron-rich core with little to no mantle NMDCO_relaxed.owl ENVO:01001144 biolink:NamedThing sub-Earth A terrestrial planet which has a mass smaller than Earth's, such that 1) it lacks a magnetic field strong enough to shield its atmosphere from erosion by stellar wind and 2) it has comparatively short periods of geological activity unless it is subject to gravitational tidal forces from a much more massive object. NMDCO_relaxed.owl ENVO:01001151 biolink:NamedThing proplyd A protoplanetary disk which is externally illuminated and undergoing photoevaporation. NMDCO_relaxed.owl ENVO:01001158 biolink:NamedThing hydrodynamic escape An atmospheric escape process during which atoms that are parts of a planetary atmosphere escape into outer space through numerous collisions with lighter atoms in that atmosphere. NMDCO_relaxed.owl ENVO:01001159 biolink:NamedThing cirrus homogenitus cloud A cloud which is cirriform and is formed by condensation events centred on an aircraft's contrail. NMDCO_relaxed.owl ENVO:01001418 biolink:NamedThing cirrus fibratus cloud A cirrus cloud which occurs as a detached unit or a thin veil and consists of nearly straight or irregularly curved filaments that do not terminate in hooks or tufts. NMDCO_relaxed.owl ENVO:01001421 biolink:NamedThing cirrus uncinus cloud A cirrus cloud which does not have grey parts and which is often shaped like a comma, terminating at its highest point in a hook, or in a tuft, the upper part of which is not in the form of a rounded protuberance. NMDCO_relaxed.owl ENVO:01001422 biolink:NamedThing cirrus spissatus cloud A cirrus cloud which 1) is structurally organised in patches, 2) is sufficiently dense to appear greyish when viewed towards the local star and 3) may veil, the local star, obscure its outline, or even hide it entirely. NMDCO_relaxed.owl ENVO:01001425 biolink:NamedThing cirrus castellanus cloud A cirrus cloud which 1) has linearly arranged cumuliform protuberances which resemble crenellated turrets or towers, some of which are taller than they are wide in some portion of their upper parts, 2) possess a lower region or base which connects these protuberances. NMDCO_relaxed.owl ENVO:01001335 biolink:NamedThing anchor ice An ice mass which is attached to a bed underneath a body of water. NMDCO_relaxed.owl ENVO:01001506 biolink:NamedThing ice calf An ice mass which has calved off an larger mass of ice. NMDCO_relaxed.owl ENVO:01001530 biolink:NamedThing water ice core An ice mass which has been drilled from an accumulation of snow and ice that has built up over many years and that has recrystallized and has trapped air bubbles from previous time periods. NMDCO_relaxed.owl ENVO:01001536 biolink:NamedThing sea ice mass An ice mass which is composed primarily of sea ice. NMDCO_relaxed.owl ENVO:03000065 biolink:NamedThing ice floe An ice mass which forms a cohesive and contiguous sheet of water ice, floating upon the surface of a water body. NMDCO_relaxed.owl ENVO:03400005 biolink:NamedThing ice pellet An ice mass which is 1) transparent or translucent, 2) rounded, spherically, or cylindrically shaped, and 3) less than 5 milimetres in diameter. NMDCO_relaxed.owl ENVO:03400012 biolink:NamedThing hail stone An ice mass which 1) occurs in a ball-shape or irregular lump, 2) has a minimum diameter of 5 millimeters (or 0.2 inches), and 3) is formed within convective clouds. NMDCO_relaxed.owl ENVO:03400015 biolink:NamedThing sleet pellet An ice mass which is primarily composed of frozen or mostly frozen raindrops or refrozen partially melted snowflakes. NMDCO_relaxed.owl ENVO:01001164 biolink:NamedThing geodiversity A quality which inheres in a astronomical body or astronomical body part by virtue of the variation in its material composition, participation in geological processes, and the variation in is land- and hydroforms. NMDCO_relaxed.owl PATO:0000051 biolink:NamedThing morphology A quality of a single physical entity inhering in the bearer by virtue of the bearer's size or shape or structure. NMDCO_relaxed.owl PATO:0001509 biolink:NamedThing functionality A quality of a single physical entity that arises by virtue of whether the bearer exhibits the ability to perform a regular function(s). NMDCO_relaxed.owl PATO:0001995 biolink:NamedThing organismal quality A quality that inheres in an entire organism or part of an organism. NMDCO_relaxed.owl PATO:0002182 biolink:NamedThing molecular quality A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc. NMDCO_relaxed.owl PATO:0002303 biolink:NamedThing decreased object quality A quality of an object that has a value that is decreased compared to normal or average. NMDCO_relaxed.owl PATO:0002305 biolink:NamedThing increased object quality A quality of an object that has a value that is increased compared to normal or average. NMDCO_relaxed.owl PATO:0045001 biolink:NamedThing normal object quality A quality of an object that has a value that is normal or average. NMDCO_relaxed.owl PATO:0070044 biolink:NamedThing anatomical structure quality A quality of continuant that exist at the anatomical level of organisation and anything under it. This includes, but is not limited to, cells , tissues, and components. NMDCO_relaxed.owl ENVO:06105014 biolink:NamedThing biodegradation A biological process during which a material entity is broken down. NMDCO_relaxed.owl GO:0000003 biolink:NamedThing reproduction The production of new individuals that contain some portion of genetic material inherited from one or more parent organisms. NMDCO_relaxed.owl GO:0002376 biolink:NamedThing immune system process Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats. NMDCO_relaxed.owl GO:0008152 biolink:NamedThing metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. NMDCO_relaxed.owl GO:0009987 biolink:NamedThing cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. NMDCO_relaxed.owl GO:0022414 biolink:NamedThing reproductive process A biological process that directly contributes to the process of producing new individuals by one or two organisms. The new individuals inherit some proportion of their genetic material from the parent or parents. NMDCO_relaxed.owl GO:0032501 biolink:NamedThing multicellular organismal process Any biological process, occurring at the level of a multicellular organism, pertinent to its function. NMDCO_relaxed.owl GO:0032502 biolink:NamedThing developmental process A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition. NMDCO_relaxed.owl GO:0040007 biolink:NamedThing growth The increase in size or mass of an entire organism, a part of an organism or a cell. NMDCO_relaxed.owl GO:0040011 biolink:NamedThing locomotion Self-propelled movement of a cell or organism from one location to another. NMDCO_relaxed.owl GO:0042063 biolink:NamedThing gliogenesis The process that results in the generation of glial cells. This includes the production of glial progenitors and their differentiation into mature glia. NMDCO_relaxed.owl GO:0042592 biolink:NamedThing homeostatic process Any biological process involved in the maintenance of an internal steady state. NMDCO_relaxed.owl GO:0043473 biolink:NamedThing pigmentation The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells. NMDCO_relaxed.owl GO:0044419 biolink:NamedThing biological process involved in interspecies interaction between organisms Any process evolved to enable an interaction with an organism of a different species. NMDCO_relaxed.owl GO:0048468 biolink:NamedThing cell development The cellular developmental process in which a specific cell progresses from an immature to a mature state. Cell development start once cell commitment has taken place. NMDCO_relaxed.owl GO:0050896 biolink:NamedThing response to stimulus Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism. NMDCO_relaxed.owl GO:0051179 biolink:NamedThing localization Any process in which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported, tethered to or otherwise maintained in a specific location. In the case of substances, localization may also be achieved via selective degradation. NMDCO_relaxed.owl GO:0065007 biolink:NamedThing biological regulation Any process that modulates a measurable attribute of any biological process, quality or function. NMDCO_relaxed.owl GO:0098754 biolink:NamedThing detoxification Any process that reduces or removes the toxicity of a toxic substance. These may include transport of the toxic substance away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance. NMDCO_relaxed.owl ENVO:01001210 biolink:NamedThing defence against flooding A planned process during which an environmental system is modified to mitigate or nullify the impacts of flooding. NMDCO_relaxed.owl ENVO:02500042 biolink:NamedThing pollution control A planned process during which the amount of pollutants released into an environmental system is regulated. NMDCO_relaxed.owl ENVO:01001171 biolink:NamedThing conservation-focused active ecosystem management process An active management process which has the conservation of an ecosystem, or a part thereof, as its primary objective. NMDCO_relaxed.owl ENVO:01001499 biolink:NamedThing active agri-ecosystem management process An active ecosystem management process which targets an agricultural ecosystem. NMDCO_relaxed.owl ENVO:02500032 biolink:NamedThing planned revegetation A planned process during which human agents establish plant communities in ecosystems which have previously been, partially or wholly, stripped of existing plant communities. NMDCO_relaxed.owl ENVO:01001175 biolink:NamedThing habitat fragmentation process An ecosystem fragmentation process during which discontinuities emerge in the habitats of one or more ecological populations. NMDCO_relaxed.owl ENVO:01001179 biolink:NamedThing cnidarian-associated environment An environmental system determined by a cnidarian or part of a cnidarian. NMDCO_relaxed.owl ENVO:01001177 biolink:NamedThing arable land Land which is regularly manipulated by human activities, such as plowing or tilling, in order to grow crops. NMDCO_relaxed.owl ENVO:01001178 biolink:NamedThing pasturable land Land which hosts a community of herbaceous plants - such as grasses and forbs - upon which animals may graze. NMDCO_relaxed.owl ENVO:01001183 biolink:NamedThing arable or pasturable land Land which either hosts plant communities upon which animals may graze has been manipulated by tilling, ploughing, or other human activity for the purposes of seed sowing or planting crops. NMDCO_relaxed.owl ENVO:01001524 biolink:NamedThing frozen land Land which is below the freezing point of water. NMDCO_relaxed.owl ENVO:01001582 biolink:NamedThing forest floor Land which is present within a forest biome. NMDCO_relaxed.owl ENVO:03000145 biolink:NamedThing snow-covered land Land which is covered or partially covered by snow. NMDCO_relaxed.owl ENVO:03600073 biolink:NamedThing contaminated land Land which has elevated levels of some contaminants or substances that are potentially hazardous to health or the environment. NMDCO_relaxed.owl ENVO:01001182 biolink:NamedThing tended pasturable land Pasturable land which is maintained by human activities in order to provide grazing oppoturnities for livestock. NMDCO_relaxed.owl ENVO:01001186 biolink:NamedThing acidic volcanic ash Volcanic ash which has increased levels of molecules or ions capable of donating a hydron (proton or hydrogen ion) to other chemical entities, or, alternatively, capable of forming covalent bonds with other chemicals via the acceptance of an electron pair, resulting in a bulk pH measurement of less than 7. NMDCO_relaxed.owl ENVO:01001187 biolink:NamedThing holothurian digestive tract A digestive tract environment which has its properties and dynamics determined by the digestive tract of an echinoderm from the class Holothuroidea. NMDCO_relaxed.owl UBERON:0001555 biolink:NamedThing digestive tract A tube extending from the mouth to the anus. NMDCO_relaxed.owl ENVO:01001188 biolink:NamedThing holothurian digestive tract contents A bodily fluid which is present in the digestive tract of a member of the Holothuroidea. NMDCO_relaxed.owl UBERON:0006314 biolink:NamedThing bodily fluid Liquid components of living organisms. includes fluids that are excreted or secreted from the body as well as body water that normally is not. NMDCO_relaxed.owl UBERON:0000179 biolink:NamedThing haemolymphatic fluid Circulating fluid that is part of the hemolymphoid system. Blood, lymph, interstitial fluid or its analogs. NMDCO_relaxed.owl UBERON:0000910 biolink:NamedThing chyme A semifluid mass of partly digested food expelled by the stomach into the duodenum. NMDCO_relaxed.owl UBERON:0000912 biolink:NamedThing mucus Mucus is a bodily fluid consisting of a slippery secretion of the lining of the mucous membranes in the body. It is a viscous colloid containing antiseptic enzymes (such as lysozyme) and immunoglobulins. Mucus is produced by goblet cells in the mucous membranes that cover the surfaces of the membranes. It is made up of mucins and inorganic salts suspended in water. NMDCO_relaxed.owl UBERON:0001089 biolink:NamedThing sweat Secretion produced by a sweat gland. NMDCO_relaxed.owl UBERON:0001796 biolink:NamedThing aqueous humor of eyeball A thick watery refractive medium that fills the space between the lens and the cornea[WP]. NMDCO_relaxed.owl UBERON:0001913 biolink:NamedThing milk An emulsion of fat globules within a fluid that is secreted by the mammary gland during lactation. NMDCO_relaxed.owl UBERON:0001970 biolink:NamedThing bile Vital aqueous secretion of the liver that is formed by hepatocytes and modified down stream by absorptive and secretory properties of the bile duct epithelium. NMDCO_relaxed.owl UBERON:0007779 biolink:NamedThing transudate Any bodily fluid that has passed through a membrane such as the capillary wall, as a result of unbalanced hydrostatic and osmotic forces. NMDCO_relaxed.owl UBERON:0007794 biolink:NamedThing secretion of serous gland Any fluid produced by a serous gland. NMDCO_relaxed.owl UBERON:0013727 biolink:NamedThing notochordal fluid Fluid contained within the notochordal canal. NMDCO_relaxed.owl UBERON:0036217 biolink:NamedThing coelomic fluid A bodily fluid that is located in the coelom. NMDCO_relaxed.owl ENVO:01001190 biolink:NamedThing brown sea ice Sea ice which has a brown colouration, either due to 1) the presence of pigments which are or were contained in the members of ecological assemblages, such as algal communities, living or trapped within the ice or 2) due to the presence of trapped sediments. NMDCO_relaxed.owl ENVO:01001512 biolink:NamedThing congelation sea ice Sea ice which 1) has formed on the submerged surface (i.e. the base) of an existing mass of sea ice and 2) is composed of columnar crystals due to the downward growth of the crystals into the water. NMDCO_relaxed.owl ENVO:03000071 biolink:NamedThing first year ice Sea ice which has formed over a single freezing season. NMDCO_relaxed.owl ENVO:03000072 biolink:NamedThing second year ice Sea ice which is thicker than first year ice, and has survived a seasonal melting process. NMDCO_relaxed.owl ENVO:03000073 biolink:NamedThing multiyear ice Sea ice which is thicker than second year ice, and has survived more than two seasonal melting process. NMDCO_relaxed.owl ENVO:01001194 biolink:NamedThing magnetosphere A site in which charged particles are influenced by an astronomical body's magnetic field. NMDCO_relaxed.owl ENVO:01001228 biolink:NamedThing Hill sphere A site in which the attraction of satellites by gravitation is dominated by an astronomical body, bounded by a zero-velocity surface. NMDCO_relaxed.owl ENVO:01001229 biolink:NamedThing Lagrangian point A site in which the combined gravitational pull of the two large astronomical bodies is such that a smaller body, affected only by gravity, can maintain a stable position relative to those two large bodies and orbit with them due to centripetal force. NMDCO_relaxed.owl ENVO:01001196 biolink:NamedThing cosmic ray shielding disposition A radiation shielding disposition which inheres in a material or immaterial entity which attenuates or blocks cosmic rays. NMDCO_relaxed.owl ENVO:01001197 biolink:NamedThing induced magnetosphere A magnetosphere which either 1) cannot withstand the pressure of the stellar wind interacting with it, thus allowing the stellar wind to interact with the ionosphere, atmosphere, or surface of the planet generating it or 2) is formed by the interaction of the stellar wind with an astronomical body unshielded by its own magnetosphere. NMDCO_relaxed.owl ENVO:01001198 biolink:NamedThing intrinsic magnetosphere A magnetosphere which shields the body generating it from the stellar wind by withstanding the stellar wind's pressure before it reaches the body. NMDCO_relaxed.owl ENVO:01001211 biolink:NamedThing stellar radiation An electromagnetic radiation process during which electromagnetic waves or their quanta are emitted from a star. NMDCO_relaxed.owl ENVO:01001501 biolink:NamedThing radiation from a manufactured product An electromagnetic radiation process during which electromagnetic waves or their quanta are emitted from a manufactured product. NMDCO_relaxed.owl ENVO:01001861 biolink:NamedThing shortwave radiation An electromagnetic radiation process during which radiant energy with wavelengths in the visible, near-ultraviolet, or near-infrared spectra is realised. NMDCO_relaxed.owl ENVO:01001864 biolink:NamedThing photosynthetically active radiation Electromagnetic radidation which involves radiant energy in a spectral range (wave band) between 400 to 700 nanometers, that photosynthetic organisms are able to use in the process of photosynthesis. NMDCO_relaxed.owl ENVO:21001212 biolink:NamedThing microwave radiation A radiation process during which electromagnetic waves or their quanta are emitted at wavelengths and frequencies which travel exclusively in a line-of-sight fashion and which may produce molecular rotation and torsion on contact with matter. NMDCO_relaxed.owl ENVO:21001213 biolink:NamedThing radio wave radiation A radiation process during which electromagnetic waves or their quanta are emitted at wavelengths ranging from millimetre to kilometer scales. NMDCO_relaxed.owl ENVO:21001214 biolink:NamedThing infrared radiation A radiation process during which electromagnetic waves or their quanta are emitted when molecules change their rotational-vibrational movements, usually at wavelengths between 760 nm and 1 mm. NMDCO_relaxed.owl ENVO:21001215 biolink:NamedThing visible spectrum radiation A radiation process during which electromagnetic waves or their quanta are emitted at wavelengths between 380 nm and 760 nm. NMDCO_relaxed.owl ENVO:21001216 biolink:NamedThing ultraviolet radiation A radiation process during which electromagnetic waves or their quanta are emitted at wavelengths between 10 nm and 400 nm. NMDCO_relaxed.owl ENVO:21001219 biolink:NamedThing ionizing radiation A radiation process during which electromagnetic waves or their quanta are emitted with sufficient energy to disrupt molecular bonds or alter the electron number of atoms. NMDCO_relaxed.owl ENVO:01001212 biolink:NamedThing microwave stellar radiation A stellar radiation process during which electromagnetic waves or their quanta are emitted from a star at wavelengths and frequencies which travel exclusively in a line-of-sight fashion and which may produce molecular rotation and torsion on contact with matter. NMDCO_relaxed.owl ENVO:01001213 biolink:NamedThing radio wave stellar radiation A stellar radiation process during which electromagnetic waves or their quanta are emitted from a star at wavelengths ranging from millimetre to kilometer scales. NMDCO_relaxed.owl ENVO:01001214 biolink:NamedThing infrared stellar radiation A stellar radiation process during which electromagnetic waves or their quanta are emitted from a star when molecules change their rotational-vibrational movements, usually at wavelengths between 760 nm and 1 mm. NMDCO_relaxed.owl ENVO:01001215 biolink:NamedThing visible spectrum stellar radiation A stellar radiation process during which electromagnetic waves or their quanta are emitted from a star at wavelengths between 380 nm and 760 nm. NMDCO_relaxed.owl ENVO:01001216 biolink:NamedThing ultraviolet stellar radiation A stellar radiation process during which electromagnetic waves or their quanta are emitted from a star at wavelengths between 10 nm and 400 nm. NMDCO_relaxed.owl ENVO:01001219 biolink:NamedThing ionizing stellar radiation A stellar radiation process during which electromagnetic waves or their quanta are emitted from a star with sufficient energy to disrupt molecular bonds or alter the electron number of atoms. NMDCO_relaxed.owl ENVO:01001857 biolink:NamedThing outgoing longwave radiation An infrared radiation process which 1) transmits radiant energy has wavelengths between 3.0 and 100 μm, 2) is emitted from a planet and its atmosphere out to space in the form of thermal radiation. NMDCO_relaxed.owl ENVO:03500013 biolink:NamedThing mid-infrared radiation An infrared radiation during which waves with frequencies between 30 THz and 120 THz and with wavelengths between 10 micrometers and 2.5 micrometers are emitted by a source. NMDCO_relaxed.owl ENVO:03500014 biolink:NamedThing near-infrared radiation An infrared radiation during which waves with frequencies between 120 THz and 400 THz and with wavelengths between 2.5 micrometers and 750 nanometers are emitted by a source. NMDCO_relaxed.owl ENVO:03500015 biolink:NamedThing far-infrared radiation An infrared radiation which consists of waves with frequencies between 300 GHz and 30 THz and with wavelengths between 1 mm and 10 micrometers are emitted by a source. NMDCO_relaxed.owl ENVO:01001217 biolink:NamedThing X-ray stellar radiation A stellar radiation process during which penetrating electromagnetic radiation is emitted by high-energy electrons as they fall into a lower state of energy. NMDCO_relaxed.owl ENVO:01001218 biolink:NamedThing gamma-ray stellar radiation A stellar radiation process during which penetrating electromagnetic radiation is emitted from the radioactive decay (gamma decay) of atomic nuclei. NMDCO_relaxed.owl ENVO:21001217 biolink:NamedThing X-ray radiation A radiation process during which penetrating electromagnetic radiation is emitted by high-energy electrons as they fall into a lower state of energy. NMDCO_relaxed.owl ENVO:21001218 biolink:NamedThing gamma-ray radiation A radiation process during which penetrating electromagnetic radiation is emitted from the radioactive decay (gamma decay) of atomic nuclei. NMDCO_relaxed.owl ENVO:01001223 biolink:NamedThing lumber production process A process during which wood is processed into beams or planks. NMDCO_relaxed.owl ENVO:01001232 biolink:NamedThing sapropelic kerogen Kerogen which cotains alginite, amorphous organic matter, cyanobacteria, freshwater algae, and land plant resins, thus having a hydrogen to carbon ratio above 1.25, and oxygen to carbon ratio below 0.15, readily produces liquid hydrocarbons, has reduced concentrations of aromatic structures, and primarily derived from proteins and lipids. NMDCO_relaxed.owl ENVO:01001233 biolink:NamedThing labile kerogen Kerogen from which heavy hydrocarbons (such as oils) are derived following chemical break down. NMDCO_relaxed.owl ENVO:01001234 biolink:NamedThing recalcitrant kerogen Kerogen from which light hydrocarbons (such as hydrocarbon gases) are derived following chemical break down. NMDCO_relaxed.owl ENVO:01001235 biolink:NamedThing planktonic kerogen Kerogen which is enriched in sulfur compounds, has a hydrogen to carbon ratio under 1.25, an oxygen to carbon ratio between 0.03 and 0.18, derives into mixtures of hydrocarbon gas and oil, and derives from marine organic materials (primarily lipids) which are formed in reducing environments. NMDCO_relaxed.owl ENVO:01001237 biolink:NamedThing humic kerogen Kerogen which derives from land plants, resembles wood or coral in structure, has a hydrogen to carbon ratio under 1, an oxygen to carbon ratio between 0.03 to 0.3, and which primarily produces coal or hydrocarbon gas on degradation. NMDCO_relaxed.owl ENVO:01001236 biolink:NamedThing sulfrous kerogen Planktonic kerogen which has high concentrations of sulfur compounds. NMDCO_relaxed.owl ENVO:01001247 biolink:NamedThing agronomic process An agricultural process during which humans rear plants on land for harvest and consumption. NMDCO_relaxed.owl ENVO:01001248 biolink:NamedThing animal husbandry An agricultural process during which humans rear animals on land for harvest and consumption. NMDCO_relaxed.owl ENVO:01001249 biolink:NamedThing crustacean farming process An aquaculture process during which humans rear crustaceans. NMDCO_relaxed.owl ENVO:01001254 biolink:NamedThing animal aquaculture process An aquaculture process during which humans rear animals. NMDCO_relaxed.owl ENVO:01001250 biolink:NamedThing finfish farming process An aquaculture process during which humans rear finfish. NMDCO_relaxed.owl ENVO:01001251 biolink:NamedThing mollusc farming process An aquaculture process during which humans rear molluscs. NMDCO_relaxed.owl ENVO:01001252 biolink:NamedThing seaweed farming process An aquaculture process during which humans rear seaweed. NMDCO_relaxed.owl ENVO:01001255 biolink:NamedThing plant aquaculture process An aquaculture process during which humans rear plants. NMDCO_relaxed.owl ENVO:01001253 biolink:NamedThing freshwater macrophyte farming process An aquaculture process during which humans rear freshwater macrophytes. NMDCO_relaxed.owl ENVO:01001259 biolink:NamedThing transport of waste to a designated storage site A process during which materials deemed to be waste are removed from a site and transported to another site designated for its storage. NMDCO_relaxed.owl ENVO:01001261 biolink:NamedThing transport of child feces to a designated site A waste disposal process during which the feces of human children is transported to a designated storage site. NMDCO_relaxed.owl ENVO:01001262 biolink:NamedThing transport of household waste to a designated storage site A process during which materials used in a household and deemed to be waste are removed from the housing unit and transported to another site designated for its storage. NMDCO_relaxed.owl ENVO:01001265 biolink:NamedThing thermal pollution An environmental pollution process during which the temperature of an environmental system, or parts thereof, is raised above its natural levels. NMDCO_relaxed.owl ENVO:01001633 biolink:NamedThing agricultural pollution An environmental pollution process during which contaminants derived from agricultural activity are released into an environmental system. NMDCO_relaxed.owl ENVO:02500037 biolink:NamedThing air pollution A pollution process during which particulates or other contaminants are released into a portion of air. NMDCO_relaxed.owl ENVO:02500038 biolink:NamedThing soil pollution A pollution process during which contaminants are released into soil. NMDCO_relaxed.owl ENVO:02500039 biolink:NamedThing water pollution A pollution process during which contaminants are released into water. NMDCO_relaxed.owl ENVO:02500040 biolink:NamedThing plastic pollution A pollution process during which plastic contaminants are released into an environmental material. NMDCO_relaxed.owl ENVO:02500044 biolink:NamedThing urban pollution A pollution process that results in increased levels of pollutants in an urban environment. NMDCO_relaxed.owl ENVO:01001268 biolink:NamedThing urban stormwater Stormwater which accumulates in an urban ecosystem. NMDCO_relaxed.owl ENVO:01001270 biolink:NamedThing rural stormwater Stormwater which accumulates in a rural ecosystem. NMDCO_relaxed.owl ENVO:01001559 biolink:NamedThing cryopeg A layer which is composed of ground that 1) remains unfrozen due to increased solute concentration and 2) is present within a mass of permafrost. NMDCO_relaxed.owl ENVO:01001610 biolink:NamedThing active layer in a cryosphere A layer of environmental material which is subject to freeze-thaw cycles. NMDCO_relaxed.owl ENVO:03000141 biolink:NamedThing snow layer A cryospheric layer which is primarily composed of snow. NMDCO_relaxed.owl ENVO:01001282 biolink:NamedThing silica dust Dust which is composed primarily of slicon dioxide. NMDCO_relaxed.owl ENVO:01001283 biolink:NamedThing aluminium dust Dust which is primarily composed of aluminium particles. NMDCO_relaxed.owl ENVO:01001284 biolink:NamedThing barium dust Dust which is primarily composed of barium particles. NMDCO_relaxed.owl ENVO:01001285 biolink:NamedThing talc dust Dust which is primarily composed of hydrated magnesium silicate (talc) particles. NMDCO_relaxed.owl ENVO:01001286 biolink:NamedThing slate dust Dust which is primarily composed of slate particles. NMDCO_relaxed.owl ENVO:01001288 biolink:NamedThing kaolin dust Dust which is primarily composed of kaolinite particles. NMDCO_relaxed.owl ENVO:02000099 biolink:NamedThing coal dust Dust which is derived from coal. NMDCO_relaxed.owl ENVO:02000101 biolink:NamedThing fibrous dust Dust which is composed of fibrous material. NMDCO_relaxed.owl ENVO:02000103 biolink:NamedThing metallic dust Dust which is composed primarily of some metallic material. NMDCO_relaxed.owl ENVO:02000104 biolink:NamedThing cement dust NMDCO_relaxed.owl ENVO:02000105 biolink:NamedThing clay dust Dust which is derived from clay material. NMDCO_relaxed.owl ENVO:02000109 biolink:NamedThing dust from plant parts NMDCO_relaxed.owl ENVO:03510000 biolink:NamedThing wood dust Dust which is 1) generated when wood is processed and 2) composed primarily of cellulose, polyoses, and lignin. NMDCO_relaxed.owl ENVO:03510036 biolink:NamedThing rock dust Dust which is composed of minerals and trace elements, generated by finely crushed rock. NMDCO_relaxed.owl ENVO:01001291 biolink:NamedThing pasture fire A fire which occurs in a pastureland. NMDCO_relaxed.owl ENVO:01001295 biolink:NamedThing extra-tropical cyclone A warm-core cyclone which occurs in the middle and high latitudes, primarily drawing energy from horizontal temperature contrasts between atmospheric fronts. NMDCO_relaxed.owl ENVO:01001298 biolink:NamedThing warm core cyclone A cyclone which rotates around an area low atmospheric pressure with increased temperature. NMDCO_relaxed.owl ENVO:01001300 biolink:NamedThing area of low atmospheric pressure A gaseous part of an atmosphere in which gases have reduced atmospheric pressure. NMDCO_relaxed.owl ENVO:01001668 biolink:NamedThing atmospheric frontal zone Part of an atmosphere which contains a weather front, bounded by frontal surfaces. NMDCO_relaxed.owl ENVO:01003021 biolink:NamedThing area of high atmospheric pressure A gaseous part of an atmosphere in which gases have increased atmospheric pressure. NMDCO_relaxed.owl ENVO:01001314 biolink:NamedThing estuarine coastal lower water column A layer of estuarine water which extends from an estuarine pycnocline or mid-depth to the estuarine bed and from the shore to a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters. NMDCO_relaxed.owl ENVO:01001322 biolink:NamedThing estuarine open water lower water column A layer of estuarine water which extends from an estuarine pycnocline or mid-depth to the estuary bed and from a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters to end of the estuary most distal from the coast. NMDCO_relaxed.owl ENVO:01001329 biolink:NamedThing estuarine tidal riverine open water lower water column A layer of fresh estuarine water which extends from an estuarine pycnocline or mid-depth to the estuary bed and from a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters to end of the estuary most distal from the coast. NMDCO_relaxed.owl ENVO:01001317 biolink:NamedThing estuarine tidal riverine coastal surface layer A layer of fresh estuarine water which extends a few centimeters from the surface of the water column towards the estuary bed and from the land-water interface to a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters. NMDCO_relaxed.owl ENVO:01001318 biolink:NamedThing estuarine tidal riverine coastal upper water column A layer of fresh estuarine water which extends from the surface of the water column to the pycnocline or mid-depth and from the land-water interface to a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters. NMDCO_relaxed.owl ENVO:01001324 biolink:NamedThing estuarine tidal riverine coastal pycnocline An estuarine coastal pycnocline which is composed primarily of fresh tidal water. NMDCO_relaxed.owl ENVO:01001325 biolink:NamedThing estuarine tidal riverine coastal lower water column A layer of fresh estuarine water which extends from an estuarine pycnocline or mid-depth to the estuarine bed and from the land-water interface to a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters. NMDCO_relaxed.owl ENVO:01001326 biolink:NamedThing estuarine tidal riverine open water surface layer A layer of fresh, tidal estuarine water which extends a few centimeters from the surface of the water column towards the estuary bed and from a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters until the end of the estuary most distal from the coast. NMDCO_relaxed.owl ENVO:01001327 biolink:NamedThing estuarine tidal riverine open water upper water column A layer of fresh, tidal estuarine water which extends from the surface of the water column to the pycnocline or mid-depth and from a fiat boundary where the estuary bed below the water column reaches a depth of 4 meters until the end of the estuary most distal from the coast. NMDCO_relaxed.owl ENVO:01001328 biolink:NamedThing estuarine tidal riverine open water pycnocline An estuarine open water pycnocline which is composed primarily of fresh tidal water. NMDCO_relaxed.owl ENVO:01001330 biolink:NamedThing nitrogen cycling A biogeochemical cycle which has nitrogen-bearing chemical entities as participants. NMDCO_relaxed.owl ENVO:02500009 biolink:NamedThing biogeochemical cycling A biogeochemical process during which one or more chemical compounds are sequentially converted into a series of related compounds in a regularly repeating, periodic fashion. NMDCO_relaxed.owl ENVO:01001331 biolink:NamedThing sulfur cycling A biogeochemical cycle which has sulfur-bearing chemical entities as participants. NMDCO_relaxed.owl ENVO:01001332 biolink:NamedThing phosphorous cycling A biogeochemical cycle which has phosphorous-bearing chemical entities as participants. NMDCO_relaxed.owl ENVO:02500010 biolink:NamedThing carbon cycling A biogeochemical cycle which has carbon-bearing chemical entities as participants. NMDCO_relaxed.owl ENVO:2000046 biolink:NamedThing oxygen cycling A biogeochemical cycle which has oxygen as participant. NMDCO_relaxed.owl ENVO:01001333 biolink:NamedThing marine tidal flow process A tidal flow process which occurs in an ocean or sea and during which tidal movements generate advective flows, often amplified in velocity when moving through an inlet, pass or channel. NMDCO_relaxed.owl ENVO:01001337 biolink:NamedThing riverine anchor ice Anchor ice which is attached to a riverbed. NMDCO_relaxed.owl ENVO:01001338 biolink:NamedThing diurnal marine tidal flow zone A marine zone in which ocean waters undergo a diurnal (once per day) tidal oscillation - with one high and one low tide per day - due to the supression of a second daily oscillation by the geometry of the ocean basin and obstructions presented by land masses. NMDCO_relaxed.owl ENVO:01001340 biolink:NamedThing semi-diurnal marine tidal flow zone A marine tidal flow zone in which ocean waters undergo a semi-diurnal (twice per day) tidal oscillation - with two high and two low tides per day of roughly equal amplitude. NMDCO_relaxed.owl ENVO:01001339 biolink:NamedThing diurnal marine tidal flow process A tidal flow process which occurs once per day in ocean waters where a second daily oscillation is blocked by land masses or ocean basin geometry. NMDCO_relaxed.owl ENVO:01001343 biolink:NamedThing semi-diurnal marine tidal flow process A marine tidal flow process which occurs twice per day, resulting in two high and two low tides per day, both of roughly equal amplitude. NMDCO_relaxed.owl ENVO:01001631 biolink:NamedThing groundwater discharge process A water flow process during which water flows out of an aquifer. NMDCO_relaxed.owl ENVO:01001632 biolink:NamedThing groundwater flow A water flow process during which water is transported through an aquifer. NMDCO_relaxed.owl ENVO:01001660 biolink:NamedThing frost action process A material transport process during which alternate freezing and thawing of moisture in soil, rock and other materials results modifications of those materials and in the formation of structures on, or in, the ground. NMDCO_relaxed.owl ENVO:01001666 biolink:NamedThing glacial run A water flow process which comprises a sudden‐onset high‐magnitude discharge of water and sediment from a glacial source NMDCO_relaxed.owl ENVO:01003007 biolink:NamedThing percolation of water through soil Percolation during which water moves through the interstices of soil. NMDCO_relaxed.owl ENVO:02000122 biolink:NamedThing peat drainage A drainage process during which water is transported away from peat. NMDCO_relaxed.owl ENVO:02500033 biolink:NamedThing evapotranspiration Evapotranspiration is the sum of evaporation and plant transpiration from the Earth's land and ocean surface to the atmosphere. NMDCO_relaxed.owl ENVO:03000107 biolink:NamedThing wet snow avalanche An avalanche during which a suspension of water and snow flows down a sloping surface. NMDCO_relaxed.owl ENVO:03000146 biolink:NamedThing water cooling A material transport process during which liquid water is circulated in the vicinity of a heat source in order to absorb thermal energy and transport it away form that source. NMDCO_relaxed.owl ENVO:06105230 biolink:NamedThing water infiltration A water flow process during which water occupies the pores or interstices of a solid or semi-solid material. NMDCO_relaxed.owl ENVO:06105241 biolink:NamedThing soil drainage A drainage process during which liquid water is transported away from soil. NMDCO_relaxed.owl ENVO:01001344 biolink:NamedThing freshwater seep riverine anchor ice Anchor ice which is attached to a riverbed where a river flows into a marine water body and which is formed by the freezing of freshwater seeping out of the riverbed's sediments. NMDCO_relaxed.owl ENVO:01001347 biolink:NamedThing glacial equlibrium line A zone on a glacier which is roughly linear and where the rates of ice ablation and accumulation are approximately equal. NMDCO_relaxed.owl ENVO:01001350 biolink:NamedThing ice accumulation zone A material accumulation zone in which the rates of ice formation processes exceed those of ice decumulation processes, leading to a net icrease in some mass of ice. NMDCO_relaxed.owl ENVO:01001352 biolink:NamedThing glacial ice accumulation zone An ice accumulation zone which overlaps part of a glacier. NMDCO_relaxed.owl ENVO:01001356 biolink:NamedThing volcanic crater zone The site which is located in a volcanic crater. NMDCO_relaxed.owl ENVO:01001358 biolink:NamedThing hydroclimate A climate which is realised through hydrological processes. NMDCO_relaxed.owl ENVO:03000140 biolink:NamedThing tundra climate A climate which 1) has a mean temperature for the warmest month of less than 10°C (50°F), but higher than 0°C (32°F), 2) is not conducive to a permanent surficial cover of snow or ice, and 3) supports a tundra ecosystem. NMDCO_relaxed.owl ENVO:01001372 biolink:NamedThing aerosolised particle formation event An aerosol formation process during which the rate of particle formation exceeds that which is normally present in the site of its occurrence. NMDCO_relaxed.owl ENVO:01001361 biolink:NamedThing atmospheric wind direction A direction which inheres in an atmospheric wind, typically expressed as the inverse of the direction the wind is moving in. NMDCO_relaxed.owl PATO:0000365 biolink:NamedThing down A directional quality inhering in a bearer by virtue of the bearer's direction from a higher to a lower point. NMDCO_relaxed.owl PATO:0000366 biolink:NamedThing left A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces east. NMDCO_relaxed.owl PATO:0000367 biolink:NamedThing right A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces west. NMDCO_relaxed.owl PATO:0000370 biolink:NamedThing up A directional quality inhering in a bearer by virtue of the bearer's direction from a lower to a higher point. NMDCO_relaxed.owl PATO:0001900 biolink:NamedThing front A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the south when it faces north. NMDCO_relaxed.owl PATO:0001901 biolink:NamedThing back A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces south. NMDCO_relaxed.owl PATO:0001902 biolink:NamedThing unidirectional A directional quality inhering in a bearer by virtue of the bearer's having one direction only. NMDCO_relaxed.owl PATO:0001903 biolink:NamedThing bi-directional A directional quality inhering in a bearer by virtue of the bearer's having two directions. NMDCO_relaxed.owl PATO:0001904 biolink:NamedThing circling direction A directional quality inhering in a bearer by virtue of the bearer's direction approximating the shape of a circle. NMDCO_relaxed.owl PATO:0045090 biolink:NamedThing cardinal direction The four cardinal directions or cardinal points are the directions north, east, south, and west, commonly denoted by their initials, N, E, S, W. East and west are at right angles to north and south, with east being in the clockwise direction of rotation from north and west being directly opposite east. NMDCO_relaxed.owl ENVO:01001362 biolink:NamedThing atmospheric wind speed The speed of an atmospheric wind. NMDCO_relaxed.owl PATO:0000008 biolink:NamedThing speed A physical quality inhering in a bearer by virtue of the bearer's scalar absolute value of the rate of change of the bearer's position. NMDCO_relaxed.owl ENVO:01001606 biolink:NamedThing speed of a water current NMDCO_relaxed.owl ENVO:09200028 biolink:NamedThing speed of soil water infiltration The speed of some soil water infiltration. NMDCO_relaxed.owl ENVO:09200030 biolink:NamedThing speed of soil drainage The speed of some soil drainage. NMDCO_relaxed.owl PATO:0000303 biolink:NamedThing increased speed A speed which is relatively high. NMDCO_relaxed.owl PATO:0000304 biolink:NamedThing decreased speed A speed which is relatively low. NMDCO_relaxed.owl PATO:0001522 biolink:NamedThing sound speed A physical quality inhering in sound by virtue of the bearer's travelling speed in a given medium under specified conditions. NMDCO_relaxed.owl PATO:0045063 biolink:NamedThing normal speed A speed which is relatively normal or average NMDCO_relaxed.owl ENVO:01001363 biolink:NamedThing volume of hydrological precipitation The volume of water which has fallen during a precipitation process. NMDCO_relaxed.owl PATO:0000918 biolink:NamedThing volume A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies. NMDCO_relaxed.owl ENVO:09200024 biolink:NamedThing volume of runoff The volume of some runoff. NMDCO_relaxed.owl ENVO:09200025 biolink:NamedThing volume of evaporation The volume of some evaporation. NMDCO_relaxed.owl ENVO:09200026 biolink:NamedThing volume of evapotranspiration The volume of some evapotranspiration. NMDCO_relaxed.owl ENVO:09200027 biolink:NamedThing volume of rain The volume of some rain. NMDCO_relaxed.owl PATO:0000595 biolink:NamedThing increased volume A volume which is relatively high. NMDCO_relaxed.owl PATO:0000596 biolink:NamedThing decreased volume A volume which is relatively low. NMDCO_relaxed.owl PATO:0045060 biolink:NamedThing normal volume A volume which is relatively normal or average NMDCO_relaxed.owl ENVO:01001373 biolink:NamedThing secondary atmospheric aerosol formation event A secondary aerosol formation process which occurs in an atmosphere at an increased rate relative to background processes of the same kind. NMDCO_relaxed.owl ENVO:01001366 biolink:NamedThing aerosolised particle formation process A process during which particles suspended in a gaseous medium are formed. NMDCO_relaxed.owl ENVO:01001375 biolink:NamedThing sea ice variability A variability quality which inheres in sea ice, particularly in its concentration, area and extent, type, motion, deformation, age, thickness, and volume. NMDCO_relaxed.owl PATO:0000438 biolink:NamedThing invariant A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation. NMDCO_relaxed.owl PATO:0001227 biolink:NamedThing variant A variability quality inhering in a bearer by virtue of whether the bearer exhibits variation or change. NMDCO_relaxed.owl PATO:0001956 biolink:NamedThing variability of size A variability quality inhering in a bearer by virtue of whether the bearer exhibits size variation or change. NMDCO_relaxed.owl PATO:0005001 biolink:NamedThing variability of count A variability quality inhering in the bearer by virtue of the bearer having a variable number or count of an entity. NMDCO_relaxed.owl ENVO:01001377 biolink:NamedThing sea surface height A elevation quality which inheres in a marine water body by virtue of the position of that water body's surface layer (adjacent to an atmosphere) relative to some reference elevation. NMDCO_relaxed.owl PATO:0001687 biolink:NamedThing elevation A positional quality inhering in a bearer by virtue of the bearer's vertical distance of a point above or below a reference surface. NMDCO_relaxed.owl ENVO:06105203 biolink:NamedThing water table depth An elevation which inheres in a water table by virture of its vertical distance from a land surface. NMDCO_relaxed.owl PATO:0001688 biolink:NamedThing increased elevation An elevation which is relatively high. NMDCO_relaxed.owl PATO:0001689 biolink:NamedThing decreased elevation An elevation which is relatively low. NMDCO_relaxed.owl PATO:0002416 biolink:NamedThing sunken Flattened from above downward; below the normal level or the level of the surrounding parts. NMDCO_relaxed.owl ENVO:01001379 biolink:NamedThing mussel bed A marine faunal bed which is dominated by mussels of the Mytilus or Modiolus genera either 1) resting on the sediment surface, 2) partially embedded in the sediment, 3) attached to conspecifics (by using their byssal threads), or 4) attached to a piece of gravel in slightly gravelly fine sediments. NMDCO_relaxed.owl ENVO:01001380 biolink:NamedThing neritic mussel reef A marine reef which is located on a shelf (i.e. in the neritic zone) and primarily composed of self-adhered or conglomerated mussel shells. NMDCO_relaxed.owl ENVO:01001381 biolink:NamedThing oceanic mussel reef A marine reef which is present in the depths beyond (offshore relative to) the continental shelf and primarily composed of self-adhered or conglomerated mussel shells. NMDCO_relaxed.owl ENVO:01001383 biolink:NamedThing area of attached Modiolus assemblages An area which is dominated by dense accumulations of mussels, of the genus Modiolus, attached to a substrate other than conspecifics, including the associated faunal communities and predators present on the mussels (e.g., starfish). NMDCO_relaxed.owl ENVO:01001385 biolink:NamedThing Bathymodiolus-dominated oceanic mussel reef An oceanic mussel reef which is primarily settled by mussels of the genus Bathymodiolus and primarily composed of self-adhered or conglomerated mussel shells NMDCO_relaxed.owl ENVO:01001388 biolink:NamedThing oceanic mussel bed A mussel bed which is located in benthic regions beyond (offshore to) a continental shelf. NMDCO_relaxed.owl ENVO:01001389 biolink:NamedThing neritic mussel bed A mussel bed which is located in benthic regions that are part of a continental shelf. NMDCO_relaxed.owl ENVO:01001390 biolink:NamedThing Bathymodiolus-dominated oceanic mussel bed An oceanic mussel bed which has mussel communities dominated by members of the genus Bathymodiolus. NMDCO_relaxed.owl ENVO:01001392 biolink:NamedThing mussel gill tissue material NMDCO_relaxed.owl ENVO:01001393 biolink:NamedThing Bathymodiolus gill tissue material NMDCO_relaxed.owl ENVO:06105279 biolink:NamedThing sandy clay Clay which has a high proportion of sand in its composition. NMDCO_relaxed.owl ENVO:06105280 biolink:NamedThing silty clay Clay which has a high proportion of silt in its composition. NMDCO_relaxed.owl ENVO:01001398 biolink:NamedThing aerosolisation of dust A primary aerosol formation process during which dust particles are suspended in a gaseous medium. NMDCO_relaxed.owl ENVO:01001403 biolink:NamedThing haze formation event A haze formation process which has an increased rate relative to that which is usually present in a given site. NMDCO_relaxed.owl ENVO:01001416 biolink:NamedThing benthic deep-sea mining A mining process during which materials are extracted from benthic environments deep below the ocean surface, where no stellar radiation reaches.. NMDCO_relaxed.owl ENVO:01001439 biolink:NamedThing marine mining A mining process which occurs in a marine ecosystem. NMDCO_relaxed.owl ENVO:01001420 biolink:NamedThing sea bed mining A mining process during which materials are extracted from the surface, or below the surface, of the ocean floor. NMDCO_relaxed.owl ENVO:01001423 biolink:NamedThing cirrostratus fibratus cloud A cirrostratus cloud which occurs as a detached unit or a thin veil and consists of nearly straight or irregularly curved filaments that do not terminate in hooks or tufts. NMDCO_relaxed.owl ENVO:01001424 biolink:NamedThing stratocumulus castellanus cloud A stratocumulus cloud which 1) has linearly arranged cumuliform protuberances which resemble crenellated turrets or towers, some of which are taller than they are wide in some portion of their upper parts, 2) possess a lower region or base which connects these protuberances. NMDCO_relaxed.owl ENVO:01001426 biolink:NamedThing cirrocumulus castellanus cloud A cirrocumulus cloud which 1) has linearly arranged cumuliform protuberances which resemble crenellated turrets or towers, some of which are taller than they are wide in some portion of their upper parts, 2) possess a lower region or base which connects these protuberances. NMDCO_relaxed.owl ENVO:01001427 biolink:NamedThing altocumulus castellanus cloud An altocumulus cloud which 1) has linearly arranged cumuliform protuberances which resemble crenellated turrets or towers, some of which are taller than they are wide in some portion of their upper parts, 2) possess a lower region or base which connects these protuberances. NMDCO_relaxed.owl ENVO:01001429 biolink:NamedThing land conversion process An anthropisation process during which terrestrial environments - natural or anthropised - or parts thereof are altered to facilitate human activities such as agriculture, settlement, or commerce. NMDCO_relaxed.owl ENVO:01001430 biolink:NamedThing agricultural land conversion process A land conversion process during which terrestrial ecosystems are altered to facilitate agricultural activities such as crop cultivation or the rearing of livestock. NMDCO_relaxed.owl ENVO:01001432 biolink:NamedThing forestry A land use process during which humans access and manage forest ecosystems for 1) the provisioning of wood, forages, water, wildlife, and recreation as well as a broad range of other ecosystem services or 2) the maintenance of the forest ecosystem's health. NMDCO_relaxed.owl ENVO:01001442 biolink:NamedThing agriculture A land use process during which terrestrial environments are modified such that they can grow crop plants or allow the rearing of animals to provide food, fiber, medicines, or other products used by humans. NMDCO_relaxed.owl ENVO:01001433 biolink:NamedThing terrestrial mining A land use process during which materials of economic value are extracted from a planet, usually from an orebody, lode, vein, seam, reef or placer deposit. NMDCO_relaxed.owl ENVO:01001440 biolink:NamedThing coal mining A mining process during which coal is extracted from the rocky portion of an astronomical body. NMDCO_relaxed.owl ENVO:01001438 biolink:NamedThing quarrying A mining process during which rock or mineral deposits are extracted from the terrestrial surface layers of an astronomical body. NMDCO_relaxed.owl ENVO:01001441 biolink:NamedThing opencast mining A mining process during which metal ores and minerals that lie near the terrestrial surface of an astronomical body are extracted by removing the overlying material and breaking and loading the ore. NMDCO_relaxed.owl ENVO:01001452 biolink:NamedThing Calyptra habitat A habitat which supports the persistence and growth of a population of Calyptra moths and which overlaps mesic meadows and edges and clearings in vegetated areas. NMDCO_relaxed.owl ENVO:01001461 biolink:NamedThing UNEP-WCMC class 1 mountain A high-elevation mountain which has a maximum elevation greater than 4500 metres above sea level. NMDCO_relaxed.owl ENVO:01001462 biolink:NamedThing UNEP-WCMC class 2 mountain A high-elevation mountain which has a maximum elevation between 3500 and 4500 metres above sea level. NMDCO_relaxed.owl ENVO:01001463 biolink:NamedThing UNEP-WCMC class 3 mountain A high-elevation mountain which has a maximum elevation between 2500 and 3500 metres above sea level. NMDCO_relaxed.owl ENVO:01001464 biolink:NamedThing UNEP-WCMC class 4 mountain A mid-elevation mountain which has a maximum elevation between 1500 and 2499 metres above sea level and a slope greater than or equal to two degrees. NMDCO_relaxed.owl ENVO:01001465 biolink:NamedThing UNEP-WCMC class 5 mountain A mid-elevation mountain which has a maximum elevation between 1000 and 1499 metres above sea level and either 1) a slope greater than or equal to five degrees or 2) a local elevation range, within a 7 kilometre radius, of greater than 300 metres above sea level. NMDCO_relaxed.owl ENVO:01001466 biolink:NamedThing UNEP-WCMC class 6 mountain A mid-elevation mountain which has a maximum elevation between 300 and 999 metres above sea level and a local elevation range, within a 7 kilometre radius, of greater than 300 metres above sea level. NMDCO_relaxed.owl ENVO:01001470 biolink:NamedThing observatory system An observing system which generates long-term data about one or more entities of interest, typically using standardised methodology. NMDCO_relaxed.owl ENVO:01001471 biolink:NamedThing atmospheric observatory system NMDCO_relaxed.owl ENVO:01001472 biolink:NamedThing marine observatory system NMDCO_relaxed.owl ENVO:01001473 biolink:NamedThing terrestrial observatory system NMDCO_relaxed.owl ENVO:01001474 biolink:NamedThing astronomical observatory system NMDCO_relaxed.owl ENVO:01001475 biolink:NamedThing omics observatory system An observatory system which includes components used to generate (meta)genomic, (meta)transcriptomic, (meta)proteomic, metabolomic, and other omic data, information, and knowledge. NMDCO_relaxed.owl ENVO:01001481 biolink:NamedThing public prison A prison facility which is owned and operated by a state. NMDCO_relaxed.owl ENVO:03501205 biolink:NamedThing private prison A prison facility which is owned and operated by a private corporation. NMDCO_relaxed.owl ENVO:03501355 biolink:NamedThing public-private prison A prison facility which is owned by the state and operated by a private corporation. NMDCO_relaxed.owl ENVO:01001482 biolink:NamedThing tornado A tornado is an aeroform consisting of at least one rapidly rotating column of air that is in contact with both the surface of an astronomical body and pendant from within or beneath a cumulonimbus or cumulus cloud. NMDCO_relaxed.owl ENVO:01001484 biolink:NamedThing fire whirl A fire whirl is a whirlwind induced by the contraction and rotation of intense, rising heat and turbulent, eddying air masses resulting from a large fire and made up of a core of burning matter surrounded by a rotating pocket of air. NMDCO_relaxed.owl ENVO:01001485 biolink:NamedThing multiple vortex tornado A tornado which comprises two or more columns of spinning air rotating about their own axis and at the same time around a common center. NMDCO_relaxed.owl ENVO:01001486 biolink:NamedThing landspout A tornado which a) is not associated with a mesocyclone and is thus relatively weak and short-lived, b) is centred on a small, smooth condensation funnel which often does not reach the planetary surface, and c) forms a distinctively laminar cloud of dust when it makes contact with the land. NMDCO_relaxed.owl ENVO:01001487 biolink:NamedThing waterspout A tornado which connects a cumulus or cumulonimbus cloud to a body of water, often transporting water from that water body along the spiraling winds constituting its vortex. NMDCO_relaxed.owl ENVO:01001495 biolink:NamedThing dioxygen dissolved in marine water Dioxygen which is the solute in a solution with ocean water as its solvent. NMDCO_relaxed.owl ENVO:01001496 biolink:NamedThing inorganic macronutrient dissolved in ocean water A macronutrient role which inheres in nitrate, nitrogen dioxide, ammonium, silicon, or phosphate dissolved in ocean water. NMDCO_relaxed.owl ENVO:01001502 biolink:NamedThing visible spectrum radiation from a manufactured product Radiation from a manufactured product during which light between the wavelenghts of 380 nm and 760 nm is emitted. NMDCO_relaxed.owl ENVO:01001504 biolink:NamedThing glacial surface layer velocity A velocity quality which inheres in the surface layer of a glacier. NMDCO_relaxed.owl PATO:0002242 biolink:NamedThing velocity A physical quality inhering in a bearer by virtue of the bearer's rate of change of the position. NMDCO_relaxed.owl PATO:0001413 biolink:NamedThing angular velocity A physical quality inhering in a bearer by virtue of the rate of the bearer's angular movement about an axis; the angle rotated in a given time. NMDCO_relaxed.owl PATO:0002471 biolink:NamedThing increased velocity A physical quality inhering in a bearer by virtue of the bearer's increased rate of change of the position. NMDCO_relaxed.owl PATO:0002472 biolink:NamedThing decreased velocity A physical quality inhering in a bearer by virtue of the bearer's decreased rate of change of the position. NMDCO_relaxed.owl PATO:0045079 biolink:NamedThing normal velocity A velocity which is relatively normal or average NMDCO_relaxed.owl ENVO:01001505 biolink:NamedThing alpine tundra biome A tundra biome which exists at high altitudes and where vegetation - dominated by a few species of dwarf shrubs, a few grasses, sedges, lichens, and mosses - is stunted due to low temperatures and high winds. NMDCO_relaxed.owl ENVO:01001508 biolink:NamedThing anchored ice calf An ice calf which is frozen to the bed of an ocean or other water body. NMDCO_relaxed.owl ENVO:01001509 biolink:NamedThing terrestrial ice calf An ice calf which rests on land. NMDCO_relaxed.owl ENVO:01001514 biolink:NamedThing congelation ice in a fresh water body Freshwater ice which forms downward from the surface of a freshwater water body and is transparent due to a reduced number of air bubbles trapped in its mass. NMDCO_relaxed.owl ENVO:01001515 biolink:NamedThing freshwater congelation ice Freshwater ice which forms on a solid substrate through the freezing of freshwater. NMDCO_relaxed.owl ENVO:01001516 biolink:NamedThing ice cave congelation ice Freshwater congelation ice which has formed on a solid substrate in an ice cave. NMDCO_relaxed.owl ENVO:01001518 biolink:NamedThing drifting sea ice mass A drift ice mass which is composed primarily of sea ice. NMDCO_relaxed.owl ENVO:01001556 biolink:NamedThing pack ice mass A drift ice mass which has an ice concentration above or equal to 7/10: which covers 70% or more of a given area of a water body. NMDCO_relaxed.owl ENVO:01001522 biolink:NamedThing fast ice A mass of sea ice which 1) is less than 2 meters in thickness and 2) forms along the coast, where it is attached to the shore, to an ice wall, to an ice front, or between shoals or grounded icebergs. NMDCO_relaxed.owl ENVO:01001535 biolink:NamedThing floeberg An ice mass which is composed of a large amount of sea ice in the form of a hummock or a group of such hummocks, frozen together and separated from any surrounding ice by sea water. NMDCO_relaxed.owl ENVO:01001523 biolink:NamedThing frazil Small, needle-like (spicules), plate-like, or discoid crystals derived from nearly pure fresh water, suspended in a water body. NMDCO_relaxed.owl ENVO:03000046 biolink:NamedThing frazil ice New ice which is composed frazil which has congealed into a thin sheet. NMDCO_relaxed.owl ENVO:03000075 biolink:NamedThing shuga New ice, which is spongy, lumpy and opaque, and forms from water which freezes in an agitated water body. NMDCO_relaxed.owl ENVO:01001531 biolink:NamedThing sea ice field An ice field which is primarily composoed of sea ice floes greater than 10 kilometers across. NMDCO_relaxed.owl ENVO:01001532 biolink:NamedThing glacier ice field An ice field which is constituted by a continuous accumulation of snow and glacier ice that completely fills a mountain basin or covers a low-relief mountain plateau. NMDCO_relaxed.owl ENVO:01001533 biolink:NamedThing mass ice flow An advective transport process during which a mass of ice is transported from one location to another. NMDCO_relaxed.owl ENVO:01001534 biolink:NamedThing tabular iceberg An iceberg which 1) has a flat upper surface, 2) is derived from an ice shelf, ice tongue, or floating tidewater glacier via detachment. NMDCO_relaxed.owl ENVO:01001539 biolink:NamedThing branched valley glacier A valley glacier which has one or more tributary glaciers as parts. NMDCO_relaxed.owl ENVO:01001540 biolink:NamedThing simple valley glacier A valley glacier which does not have any tributary glaciers flowing into it. NMDCO_relaxed.owl ENVO:01001545 biolink:NamedThing two-dimensional fiat water ice surface A two-dimensional fiat ice surface which overlaps the surface layer of a mass of water ice. NMDCO_relaxed.owl ENVO:04000000 biolink:NamedThing adfreezing Adfreezing is a freezing process during which two objects adhere to each other via ice. NMDCO_relaxed.owl ENVO:01001550 biolink:NamedThing sea-ice lead An ice lead which occurs in a marine water body and is bounded by sea ice. NMDCO_relaxed.owl ENVO:01001551 biolink:NamedThing ice lead A surface layer of a water body which has been formed as the result of surface ice fracturing and moving apart. NMDCO_relaxed.owl ENVO:01001552 biolink:NamedThing flaw lead An ice lead between a mass of fast ice and a mass of pack ice. NMDCO_relaxed.owl ENVO:01001553 biolink:NamedThing shore lead An ice lead which occurs between the shore and pack ice. NMDCO_relaxed.owl ENVO:01001555 biolink:NamedThing frozen lead An ice lead within which new, nilas, and young ice has formed. NMDCO_relaxed.owl ENVO:01001562 biolink:NamedThing hydrogel A gel which is primarily composed of a network of polymer chains that are hydrophilic, sometimes found as a colloidal gel in which water is the dispersion medium. NMDCO_relaxed.owl ENVO:01001564 biolink:NamedThing rain An aggregate of raindrops falling to a planetary surface during a precipitation process. NMDCO_relaxed.owl ENVO:03400009 biolink:NamedThing falling sleet An object aggregate which is primarily composed of particles of water in liquid, frozen, or partially frozen states. NMDCO_relaxed.owl ENVO:03400013 biolink:NamedThing falling snow An object aggregate which is composed primarily of snow falling through an atmosphere. NMDCO_relaxed.owl ENVO:03501314 biolink:NamedThing food production environmental monitoring zone 1 An object aggregate which comprises objects whose surfaces are in contact with food during its processing in a food production facility NMDCO_relaxed.owl ENVO:03501315 biolink:NamedThing food production environmental monitoring zone 2 An object aggregate which comprises objects whose surfaces are not in contact with food during its processing, but which are in close proximity to those in food production environmental monitoring zone 1. NMDCO_relaxed.owl ENVO:03501316 biolink:NamedThing food production environmental monitoring zone 3 An object aggregate which comprises a facility's set of more remote non-food-processing-contact surfaces that are in or near the processing areas (food productions environmental monitoring zones 1 and 2) and could lead to their contamination, especially through human movement. NMDCO_relaxed.owl ENVO:03501317 biolink:NamedThing food production environmental monitoring zone 4 An object aggregate which comprises objects in proximity to food production environmental monitoring zone 3. NMDCO_relaxed.owl ENVO:01001565 biolink:NamedThing water-based rain Rain which is composed of water droplets falling to a planetary surface during a rainfall process. NMDCO_relaxed.owl ENVO:01001566 biolink:NamedThing infrasound Sound which is lower in frequency than 20 Hertz, or cycles per second. NMDCO_relaxed.owl ENVO:03500012 biolink:NamedThing ultrasound radiation An acoustic radiation process during which waves that transmit sound energy at frequencies above 20 kHz are emitted by a source. NMDCO_relaxed.owl ENVO:01001570 biolink:NamedThing terrestrial ecoregion An ecoregion which is located on a landmass. NMDCO_relaxed.owl ENVO:01001611 biolink:NamedThing thawing process A warming process during which the thermal energy in a portion of environmental material is sufficient to melt water-based ice or snow. NMDCO_relaxed.owl ENVO:01001739 biolink:NamedThing warming of a fluid A material warming process during which the thermal energy in a volume of fluid increases. NMDCO_relaxed.owl ENVO:01001742 biolink:NamedThing warming of a solid A material warming process during which the thermal energy in a mass of solid material increases. NMDCO_relaxed.owl ENVO:01001613 biolink:NamedThing permafrost thawing process A thawing process during which permafrost is warmed beyond the melting point of water-based ice, snow, or other forms of solid water. NMDCO_relaxed.owl ENVO:01001614 biolink:NamedThing ice-bearing permafrost Permafrost which contains inclusions of water-based ice. NMDCO_relaxed.owl ENVO:03000088 biolink:NamedThing methane-laden permafrost Permafrost which contains pockets of trapped methane gas. NMDCO_relaxed.owl ENVO:01001621 biolink:NamedThing englacial A positional quality inhering in a bearer by virtue of the bearer being located within a glacier or ice sheet, between their summer surface or bed. NMDCO_relaxed.owl ENVO:01001853 biolink:NamedThing periglacial A positional quality inhering in a bearer by virtue of the bearer being located in the vicinity of - but not adjacent to or within - a glacier or ice sheet. NMDCO_relaxed.owl ENVO:01001879 biolink:NamedThing proglacial A positional quality which inheres in a bearer by virtue of the bearer in being in physical contact with, or close to, a glacial margin. NMDCO_relaxed.owl ENVO:01001880 biolink:NamedThing subglacial A positional quality which inheres in a bearer by virtue of the bearer in being in physical contact with or below a glacial bed. NMDCO_relaxed.owl ENVO:01001881 biolink:NamedThing supraglacial A positional quality which inheres in a bearer by virtue of the bearer in being in physical contact with the upper surface of a glacier or objects on top of the glacier. NMDCO_relaxed.owl PATO:0000618 biolink:NamedThing bilateral A positional quality inhering in a bearer by virtue of the bearer's having two sides; two-sided. NMDCO_relaxed.owl PATO:0000619 biolink:NamedThing crowded A positional quality inhering in a bearer by virtue of the bearer's being overfilled. NMDCO_relaxed.owl PATO:0000622 biolink:NamedThing erect A positional quality inhering in a bearer by virtue of the bearer's being upright in position or posture. NMDCO_relaxed.owl PATO:0000629 biolink:NamedThing misrouted A positional quality inhering in a bearer by virtue of the bearer's having mistakenly taken course, way, or passage; ill-routed. NMDCO_relaxed.owl PATO:0000631 biolink:NamedThing prostrate A positional quality inhering in a bearer by virtue of the bearer's being stretched out and lying at full length along the ground. NMDCO_relaxed.owl PATO:0001191 biolink:NamedThing medial to A spatial quality inhering in a bearer by virtue of the bearer's being located toward the middle relative to another entity. NMDCO_relaxed.owl PATO:0001193 biolink:NamedThing lateral to A spatial quality inhering in a bearer by virtue of the bearer's being located toward the side relative to another entity. NMDCO_relaxed.owl PATO:0001195 biolink:NamedThing proximal to A spatial quality inhering in a bearer by virtue of the bearer's being located more centrally than another entity. NMDCO_relaxed.owl PATO:0001234 biolink:NamedThing distal to A spatial quality inhering in a bearer by virtue of the bearer's being located further from a more centrally located entity. NMDCO_relaxed.owl PATO:0001475 biolink:NamedThing increased position A position which is relatively high. NMDCO_relaxed.owl PATO:0001476 biolink:NamedThing decreased position A positional which is relatively low. NMDCO_relaxed.owl PATO:0001630 biolink:NamedThing dispersed A positional quality inhering in a bearer by virtue of the bearer's being distributed or spread over a considerable extent. NMDCO_relaxed.owl PATO:0001632 biolink:NamedThing anterior to A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front of an organism relative to another entity. NMDCO_relaxed.owl PATO:0001652 biolink:NamedThing alignment A spatial quality inhering in a bearer by virtue of the bearer's spatial positioning with respect to an additional entity. NMDCO_relaxed.owl PATO:0001792 biolink:NamedThing left side of A spatial quality inhering in a bearer by virtue of the bearer's being located on left side of from the a another entity. NMDCO_relaxed.owl PATO:0001793 biolink:NamedThing right side of A spatial quality inhering in a bearer by virtue of the bearer's being located on right side of a another entity. NMDCO_relaxed.owl PATO:0001855 biolink:NamedThing horizontal A positional quality inhering in a bearer by virtue of the bearer's being in the plane of the horizon. NMDCO_relaxed.owl PATO:0001933 biolink:NamedThing opposite A positional quality inhering in a bearer by virtue of the bearer's being positioned on opposite sides on the same plane. NMDCO_relaxed.owl PATO:0002107 biolink:NamedThing peripheral A positional quality inhering in a bearer by virtue of the bearer's being at the edge or boundary of a related entity. NMDCO_relaxed.owl PATO:0002181 biolink:NamedThing displaced A positional quality inhering in a bearer by virtue the bearer's being changed in position. NMDCO_relaxed.owl PATO:0002233 biolink:NamedThing far from A spatial quality inhering in a bearer by virtue of the bearer's being located far (not close to) in space in relation to another entity. NMDCO_relaxed.owl PATO:0002268 biolink:NamedThing centered A positional quality inhering in a bearer by virtue of the bearer's being located in a position equidistant from edges. NMDCO_relaxed.owl PATO:0002272 biolink:NamedThing parallel to A spatial quality inhering in a bearer by virtue of the bearer's being located at the same continuous distance relative to another object. NMDCO_relaxed.owl PATO:0002349 biolink:NamedThing basal to A spatial quality inhering in a bearer by virtue of the bearer's being located toward the base of an organism relative to another entity. NMDCO_relaxed.owl PATO:0002350 biolink:NamedThing cauline to A spatial quality inhering in a bearer by virtue of the bearer's being located toward the stalk of an organism relative to another entity. NMDCO_relaxed.owl PATO:0002425 biolink:NamedThing exposed Open to view or not covered by another entity. NMDCO_relaxed.owl PATO:0002435 biolink:NamedThing abutting A positional quality inhering in a bearer by virtue of the bearer touching another entity along a border or with a projecting part. NMDCO_relaxed.owl PATO:0002436 biolink:NamedThing offset A positional quality inhering in a bearer by virtue of the bearer's position being displaced from a reference point. NMDCO_relaxed.owl PATO:0002443 biolink:NamedThing level with A positional quality inhering in a bearer by virtue of the bearer's being located at the same level as another entity. NMDCO_relaxed.owl PATO:0002463 biolink:NamedThing extends to A positional quality inhering in a bearer by virtue of some aspect of the bearer extending to the position of another entity. NMDCO_relaxed.owl PATO:0002483 biolink:NamedThing external to Positional quality in which an entity is located outside of another entity. NMDCO_relaxed.owl PATO:0002513 biolink:NamedThing oblique to A positional quality inhering in a bearer by virtue of the bearer's having a slanting direction (neither perpendicular nor parallel) relative to another entity. NMDCO_relaxed.owl PATO:0002518 biolink:NamedThing flush A positional quality inhering in a bearer by virtue of the bearer being level or even with another surface. NMDCO_relaxed.owl PATO:0005011 biolink:NamedThing continuous with A positional quality inhering in a bearer by virtue of the bearer possessing an uninterrupted or unbroken connection or spatial distribution relative to the position of another entity. NMDCO_relaxed.owl PATO:0045040 biolink:NamedThing normal position A position which is relatively normal or average NMDCO_relaxed.owl ENVO:01001623 biolink:NamedThing glacial summer surface A glacial surface layer which is present at the point in time where any given part of a glacier reaches its minimum annual mass. NMDCO_relaxed.owl ENVO:01001624 biolink:NamedThing glacial bed A glacial surface layer which is adjacent to the bedrock or debris over which a glacier flows. NMDCO_relaxed.owl ENVO:01001630 biolink:NamedThing submarine groundwater discharge process A water flow process during which fresh or brackish groundwater flows from from a landmass into the sea. NMDCO_relaxed.owl ENVO:01001634 biolink:NamedThing agricultural landscape diversification process An active agri-ecosystem management process during which the variability of land use types or the spatial structure of land under agricultural production is increased. NMDCO_relaxed.owl ENVO:01001637 biolink:NamedThing agricultural specialisation process An active agri-ecosystem management process during which an ecosystem is modified for the production of one or a small collection of crops or other agricultural products. NMDCO_relaxed.owl ENVO:01001635 biolink:NamedThing biodiversity conservation process A conservation process during which the variability of life - from genes to ecosystems - is preserved. NMDCO_relaxed.owl ENVO:01001636 biolink:NamedThing insect conservation process A biodiversity conservation process during which the variability of insect communities, or parts thereof, is preserved. NMDCO_relaxed.owl ENVO:01001641 biolink:NamedThing glaciation An interval of time within an ice age and during which temperatures fall resulting in planet-wide glacier advances. NMDCO_relaxed.owl ENVO:01001642 biolink:NamedThing interglacial An interval of time within an ice age and during which temperatures rise and result in planet-wide glacier retreat. NMDCO_relaxed.owl ENVO:01001643 biolink:NamedThing ice age A temporal interval during which a planet's surface and atmospheric temperatures fall, resulting in the presence or expansion of continental and polar ice sheets or alpine glaciers. NMDCO_relaxed.owl ENVO:01003005 biolink:NamedThing day A one-dimensional temporal region which spans the duration an astronomical body completes one rotation on its axis. NMDCO_relaxed.owl ENVO:03000096 biolink:NamedThing season A one-dimensional temporal region which is delimited by the occurrence of processes which serve as its delimiters. NMDCO_relaxed.owl ENVO:09200037 biolink:NamedThing hours of sunshine A one-dimensional temporal region during which an entity is exposed to stellar radiation. NMDCO_relaxed.owl ENVO:01001648 biolink:NamedThing suspended colloidal sediment Colloidal sediment which is suspended in a part of the hydrosphere. NMDCO_relaxed.owl ENVO:01001651 biolink:NamedThing particulate matter in a hydrosphere Waterborne particulate matter which is part of a hydrosphere. NMDCO_relaxed.owl ENVO:01001657 biolink:NamedThing calving of ice onto land An ice calving process during which a mass of ice falls from a larger mass onto land. NMDCO_relaxed.owl ENVO:01001658 biolink:NamedThing calving of ice into water An ice calving process during which a mass of ice falls from a larger mass into a body of water. NMDCO_relaxed.owl ENVO:03000030 biolink:NamedThing glacial ice calving process A process during which a part of a glacier breaks away from the main mass. NMDCO_relaxed.owl ENVO:03000032 biolink:NamedThing calving of ice from an iceberg A process during which a part of an iceberg breaks away from the main mass. NMDCO_relaxed.owl ENVO:01001659 biolink:NamedThing periglacial process A frost action process which occurs in cold environments which are not part of a glacier. NMDCO_relaxed.owl ENVO:01001664 biolink:NamedThing cryoturbation of soil A frost action process during which soil is displaced. NMDCO_relaxed.owl ENVO:01001661 biolink:NamedThing frost jacking A frost action process during which objects embedded in the ground are cumulatively displaced upwards. NMDCO_relaxed.owl ENVO:01001662 biolink:NamedThing frost sorting A frost action process during which the soil particles are differentially displaced according to their size ranges. NMDCO_relaxed.owl ENVO:01001663 biolink:NamedThing frost wedging A frost action process during which the pressure of water freezing in cracks, crevices, pores, joints or bedding planes results in the mechanical disintegration, splitting or break-up of rock. NMDCO_relaxed.owl ENVO:04000001 biolink:NamedThing frost heaving process Frost heaving is a process during which an upwards swelling of soil occurs due to freezing conditions caused by an increasing presence of ice as it grows towards the surface. NMDCO_relaxed.owl ENVO:01001670 biolink:NamedThing open cage mariculture process A mariculture process during which organisms are cultivated in cages which allow the passage of materials such as wastes, pathogens, antibiotics, and - should a containment breach occur - cultivated organisms themselves to and from the surrounding marine environment. NMDCO_relaxed.owl ENVO:01001682 biolink:NamedThing air mass An object which is composed of a continuous mass of air. NMDCO_relaxed.owl ENVO:01001689 biolink:NamedThing mass of gas An object which is composed primarily of a gas. NMDCO_relaxed.owl ENVO:01001685 biolink:NamedThing bubble A mass of gas which is separated from its surroundings by either 1) a thin liquid layer or 2) a physical or compositional discontinuity. NMDCO_relaxed.owl ENVO:01001692 biolink:NamedThing methane gas bubble A bubble which is composed primarily of methane. NMDCO_relaxed.owl ENVO:01001693 biolink:NamedThing isobaric surface A material isosurface within which pressure is approximately constant. NMDCO_relaxed.owl ENVO:01001697 biolink:NamedThing atmospheric isobaric surface An isobaric surface that is part of an atmosphere. NMDCO_relaxed.owl ENVO:01001698 biolink:NamedThing polar front A weather front which separates air masses of tropical and polar origin. NMDCO_relaxed.owl ENVO:01001706 biolink:NamedThing cold front A weather front which is nonoccluded and which moves in the direction of the warmer air mass it is adjacent to, such that colder air will occupy the site where warmer air was previously present. NMDCO_relaxed.owl ENVO:01001707 biolink:NamedThing warm front A weather front which is nonoccluded and which moves in the direction of the colder air mass it is adjacent to, such that warmer air will occupy the site where colder air was previously present. NMDCO_relaxed.owl ENVO:01001708 biolink:NamedThing anafront A weather front at which warm air is ascending to high altitudes along the frontal surface. NMDCO_relaxed.owl ENVO:01001709 biolink:NamedThing katafront A weather front at which warm air is descending to lower altitudes along the frontal surface. NMDCO_relaxed.owl ENVO:01001710 biolink:NamedThing intertropical front A weather front which exists in an equatorial trough separating the air of the Northern and Southern Hemispheres of an astronomical body. NMDCO_relaxed.owl ENVO:01001713 biolink:NamedThing upper front A weather front which is part of a mass of upper air. NMDCO_relaxed.owl ENVO:01001714 biolink:NamedThing occluded front A weather front which separates air behind a cold front from air ahead of a warm front. NMDCO_relaxed.owl ENVO:01001745 biolink:NamedThing quasi-stationary front A front which shows very little mobility. NMDCO_relaxed.owl ENVO:01001711 biolink:NamedThing upper air An air mass which is part of the free atmosphere, including the troposphere and stratosphere. NMDCO_relaxed.owl ENVO:01001715 biolink:NamedThing cold occluded front An occluded front which is adjacent to a cold front 1) that is moving away from the coldest air in the vicinity, 2) where the neighbouring cold front undercuts the neighbouring warm front in the occulsion zone, and 3) where the coldest air in the vicinity replaces less cold air towards the surface of the astronomical body. NMDCO_relaxed.owl ENVO:01001716 biolink:NamedThing warm occluded front An occluded front which is adjacent to a warm front 1) that is moving in the direction of the coldest air in the vicinity, 2) where the original cold front is forced aloft at the warm front surface, and 3) where the coldest air is replaced by less cold air at the surface of the astronomical body. NMDCO_relaxed.owl ENVO:01001717 biolink:NamedThing neutral occluded front An occluded front which is 1) adjacent to a cold and a warm front with no appreciable difference between the temperatures of their bordering air masses and 2) which creates a pressure trough, a wind-shift line, a band of cloudiness, and precipitation at the surface of the astronomical body. NMDCO_relaxed.owl ENVO:01001718 biolink:NamedThing secondary cold front A cold front which forms behind a frontal cyclone and within a cold air mass with an appreciable horizontal temperature gradient. NMDCO_relaxed.owl ENVO:01001719 biolink:NamedThing katabatic wind An atmospheric wind during which cold atmospheric gas flows downwards towards the surface of an astronomical body. NMDCO_relaxed.owl ENVO:01001728 biolink:NamedThing squall wind An atmospheric wind which rapidly forms, lasts for a duration in the order of minutes, and then rapidly decreases in speed. NMDCO_relaxed.owl ENVO:01001730 biolink:NamedThing jet-effect wind A wind which is driven by the acceleration of flow through a gap, constriction, or channel resulting from large-scale pressure gradient, or by Venturi acceleration through a constricting passage. NMDCO_relaxed.owl ENVO:01001732 biolink:NamedThing slope flow An atmospheric wind which moves up or down a slope and is driven by heating or cooling of that slope. NMDCO_relaxed.owl ENVO:01001750 biolink:NamedThing straight-line wind A wind storm during which strong gusts of wind occur, transporting atmospheric gas in a linear fashion. NMDCO_relaxed.owl ENVO:01001860 biolink:NamedThing wind gust An atmospheric wind which 1) has an increased rate relative to other winds in the same region and 2) is followed by a lull. NMDCO_relaxed.owl ENVO:03000130 biolink:NamedThing monsoon wind An atmospheric wind during which air masses over an ocean flow towards a land mass, driven by disequilibria between land and ocean surface temperatures. NMDCO_relaxed.owl ENVO:01001720 biolink:NamedThing downslope katabatic wind A katabatic wind during which atmospheric gas flows down the slope of an elevation, typically during periods of light larger-scale winds. NMDCO_relaxed.owl ENVO:01001721 biolink:NamedThing cooling-driven katabatic wind A katabatic wind which is driven by the cooling and subsequent sinking of atmospheric gas masses. NMDCO_relaxed.owl ENVO:01001726 biolink:NamedThing fall wind A katabatic wind during which the low temperature and increased density of a cold mass of atmospheric gas accelerates its descent. NMDCO_relaxed.owl ENVO:01001758 biolink:NamedThing downdraft A katabatic wind which is sudden and strong. NMDCO_relaxed.owl ENVO:01001722 biolink:NamedThing foehn wind A downslope katabatic wind during which warm, dry atmospheric gas descends along the lee side of a mountain range as a result of synoptic-scale, cross-barrier flow over that range. NMDCO_relaxed.owl ENVO:01001744 biolink:NamedThing drainage wind A downslope katabatic wind which is generated by the cooling of atmospheric gas in contact with terrain surfaces. NMDCO_relaxed.owl ENVO:01001724 biolink:NamedThing dry-adiabatic process An adiabatic process during which no condensation of water vapor occurs and no liquid water is present. NMDCO_relaxed.owl ENVO:01001727 biolink:NamedThing bora A fall wind which has a source so cold that, when the atmospheric gas reaches the lowlands or coast, the dynamic warming is insufficient to raise its temperature to the normal level for the region; hence it appears as a cold wind. NMDCO_relaxed.owl ENVO:01001731 biolink:NamedThing mountain-gap wind A jet-effect which passes through a gap, constriction, or channel between mountains in a mountain range or between ranges themselves. NMDCO_relaxed.owl ENVO:01001733 biolink:NamedThing anabatic wind An upslope wind driven by heating at the slope surface under fair-weather conditions. NMDCO_relaxed.owl ENVO:01001735 biolink:NamedThing cooling of a gas A material cooling process during which a portion of gaseous environmental material loses thermal energy to its surroundings. NMDCO_relaxed.owl ENVO:01001738 biolink:NamedThing cooling of a fluid A material cooling process during which a portion of fluid environmental material loses thermal energy to its surroundings. NMDCO_relaxed.owl ENVO:01001736 biolink:NamedThing cooling of a liquid A material cooling process during which a portion of liquid environmental material loses thermal energy to its surroundings. NMDCO_relaxed.owl ENVO:01001737 biolink:NamedThing cooling of a solid A material cooling process during which a portion of solid environmental material loses thermal energy to its surroundings. NMDCO_relaxed.owl ENVO:01001740 biolink:NamedThing warming of a gas A process of warming a fluid during which the thermal energy in a volume of gas increases. NMDCO_relaxed.owl ENVO:01001741 biolink:NamedThing warming of a liquid A process of warming a fluid which includes a volume of liquid as a participant. NMDCO_relaxed.owl ENVO:01001746 biolink:NamedThing glacier wind A drainage wind which flows along the icy surface of a glacier. NMDCO_relaxed.owl ENVO:01001751 biolink:NamedThing downburst A downdraft which is of high intensity and which spreads radially, with high speed, across the planetary surface upon reaching it. NMDCO_relaxed.owl ENVO:01001752 biolink:NamedThing dry macroburst A macroburst during which no or very little rain is generated. NMDCO_relaxed.owl ENVO:01001755 biolink:NamedThing macroburst A downburst during which high winds occur over an area larger than four kilometres in diameter. NMDCO_relaxed.owl ENVO:01001753 biolink:NamedThing wet macroburst A macroburst during which large amounts of rain are generated. NMDCO_relaxed.owl ENVO:01001754 biolink:NamedThing microburst A downburst during which high winds occur over an area less than four kilometres in diameter. NMDCO_relaxed.owl ENVO:01001756 biolink:NamedThing wet microburst A microburst during which large amounts of rain are generated. NMDCO_relaxed.owl ENVO:01001757 biolink:NamedThing dry microburst A microburst during which no or very little rain is generated. NMDCO_relaxed.owl ENVO:01001760 biolink:NamedThing seismic vibration process A vibration process which occurs in the solid parts of an astronomical body as low-frequency acoustic waves pass through them. NMDCO_relaxed.owl ENVO:01001761 biolink:NamedThing volcanic seismic vibration A seismic vibration process which is caused by a volcanic eruption. NMDCO_relaxed.owl ENVO:01001762 biolink:NamedThing impact-driven seismic vibration A seismic vibration process which is caused by the impact of a solid object on the surface of an astronomical body. NMDCO_relaxed.owl ENVO:01001764 biolink:NamedThing explosion-driven seismic vibration A seismic vibration process which is caused by an explosion. NMDCO_relaxed.owl ENVO:01001765 biolink:NamedThing mass-wasting-driven seismic vibration A seismic vibration process which is caused by mass wasting. NMDCO_relaxed.owl ENVO:01001766 biolink:NamedThing collapse-driven seismic vibration A seismic vibration process which is caused by the collapose of a material entity, sending kinetic energy into astronomical body. NMDCO_relaxed.owl ENVO:01001769 biolink:NamedThing earthquake-driven seismic vibration A seismic vibration process which is caused by an earthquake. NMDCO_relaxed.owl ENVO:01001768 biolink:NamedThing cave collapse A structural collapse process during which the walls of cave are unable to support the load placed upon them. NMDCO_relaxed.owl ENVO:01001775 biolink:NamedThing blind thrust fault A thrust fault which does not breach the surface of an astronomical body. NMDCO_relaxed.owl ENVO:01001815 biolink:NamedThing cell culturing Cell culturing is the aseptic maintainance and growth of collections of cells outside of an organisms or natural environment in a suitable culture medium. NMDCO_relaxed.owl ENVO:02000009 biolink:NamedThing plant tissue culture Plant tissue culture is the growth or maintenance of plant cells, tissues, organs or whole plants in vitro. NMDCO_relaxed.owl ENVO:02000010 biolink:NamedThing organ culture Organ culture is the aseptic culture of complete living organs of animals and plants outside the body in a suitable culture medium. Animal organs must be small enough to allow the nutrients in the culture medium to penetrate all the cells. NMDCO_relaxed.owl ENVO:01001818 biolink:NamedThing enrichment culturing unit A biomaterial culturing unit which is designed to promote the growth of selected cell populations (often at the expense of others) within a community by altering the conditions of the environment within its confines. NMDCO_relaxed.owl ENVO:01001819 biolink:NamedThing cell culturing unit A biomaterial culturing unit which is designed to promote the growth and propagation of cells in an artificial medium. NMDCO_relaxed.owl ENVO:01001822 biolink:NamedThing active enrichment culturing unit An enrichment culturing unit which contains environmental material bearing ecological assemblages undergoing selection through experimentally imposed conditions. NMDCO_relaxed.owl ENVO:01001823 biolink:NamedThing bubble plume A plume which is composed primarily of bubbles. NMDCO_relaxed.owl ENVO:01001825 biolink:NamedThing active anaerobic enrichment culturing unit An active enrichment culturing unit which contains environmental material maintained under conditions with no free oxygen. NMDCO_relaxed.owl ENVO:01001826 biolink:NamedThing active sulphate-reducing enrichment culturing unit An active enrichment culturing unit which contains environmental material maintained under conditions that favour the reduction of sulphate. NMDCO_relaxed.owl ENVO:01001827 biolink:NamedThing climactic ecological succession An ecological succession process during which 1) organisms in ecological communities possess high adaptation to the conditions in the ecosystem, 2) participant communities largely fill available niches, 3) individual organisms are typically replaced by others of the same species, 4) a near equilibrium is maintained between gross primary production and total respiration and across biogeochemical cycles. NMDCO_relaxed.owl ENVO:01001839 biolink:NamedThing safe environment for living organisms An environment in which living organisms have a low likelihood of being harmed or killed NMDCO_relaxed.owl ENVO:01001841 biolink:NamedThing volcanic soil An andosol which derives its silica content from glass and tephra ejected during a volcanic eruption. NMDCO_relaxed.owl ENVO:01001843 biolink:NamedThing atmosphere-ocean momentum transfer process A momentum transfer process which unfolds as winds generate drag at the bottom of the atmosphere,coupled to dynamical forcing at the surface of the ocean. NMDCO_relaxed.owl ENVO:01001844 biolink:NamedThing ocean surface stress A rate which inheres in an atmosphere-ocean momentum transfer process. NMDCO_relaxed.owl ENVO:09200002 biolink:NamedThing environmental system process quality The quality of a environmental system process. NMDCO_relaxed.owl ENVO:06105024 biolink:NamedThing adhesion An environmental system process during which two dissimilar materials attach to one another. NMDCO_relaxed.owl ENVO:06105025 biolink:NamedThing cohesion An environmental system process during which the molecules of similar materials are electrically attracted to one another, leading to the formation and maintenance of a microscopic structure holding the materials together. NMDCO_relaxed.owl ENVO:06105204 biolink:NamedThing photosynthetic photon flux density A rate which is characteristic of irradiance by photosynthetically active radiation by virtue of the number of photons received by an irradiated surface over time. NMDCO_relaxed.owl ENVO:09000029 biolink:NamedThing rate of hydrological evaporation in soil The rate of a hydrological evaporation when measured in soil. NMDCO_relaxed.owl ENVO:09200032 biolink:NamedThing duration of stellar radiation The duration of some stellar radiation. NMDCO_relaxed.owl PATO:0000161 biolink:NamedThing rate A quality of a single process inhering in a bearer by virtue of the bearer's occurrence per unit time. NMDCO_relaxed.owl ENVO:06105210 biolink:NamedThing soil percolation rate A rate which inheres in a soil percolation process. NMDCO_relaxed.owl PATO:0000911 biolink:NamedThing decreased rate A rate which is relatively low. NMDCO_relaxed.owl PATO:0000912 biolink:NamedThing increased rate A rate which is relatively high. NMDCO_relaxed.owl PATO:0050000 biolink:NamedThing rate of occurence The number of repeated events per unit time, occurring in a repeating series. (e.g. the number of heart beats occurring over 1 minute) NMDCO_relaxed.owl ENVO:01001845 biolink:NamedThing hoar Frost which is composed of interlocking ice crystals formed by vapour transfer (sublimation followed by deposition) of water vapour on some surface. NMDCO_relaxed.owl ENVO:01001848 biolink:NamedThing rime Water ice which 1) has a white or milky and opaque appearance, 2) has a granular texture, and 3) is formed as a result of the deposition and rapid freezing of supercooled water drops as they make contact with an exposed object. NMDCO_relaxed.owl ENVO:01001846 biolink:NamedThing depth hoar Hoar which is usually cup-shaped and facetted and which forms within dry, low-density snow beneath the snow surface. NMDCO_relaxed.owl ENVO:01001847 biolink:NamedThing hoarfrost NMDCO_relaxed.owl ENVO:01001849 biolink:NamedThing glaze NMDCO_relaxed.owl ENVO:01001882 biolink:NamedThing surface hoar Hoar which a) forms on surfaces, b) occurs when the temperature of the surface is colder than the air above and colder than the frost point of that air. NMDCO_relaxed.owl ENVO:01001858 biolink:NamedThing cloud cover An area density which inheres in a clouds by virtue of some influence exerted their mass exerts on a given area. NMDCO_relaxed.owl PATO:0001351 biolink:NamedThing area density A density quality which inheres in a bearer by virtue of some influence exerted by the bearer's mass on a given area. NMDCO_relaxed.owl ENVO:03400003 biolink:NamedThing snow cover An area density which inheres in snow distributed over an area of a landmass or other substrate. NMDCO_relaxed.owl ENVO:01001859 biolink:NamedThing dew point A temperature of air at which air become saturated with water vapour and below which airborne water vapour will condense to form liquid water (dew). NMDCO_relaxed.owl ENVO:09200001 biolink:NamedThing temperature of air The temperature of some air. NMDCO_relaxed.owl ENVO:01001865 biolink:NamedThing concentration of carbon dioxide in an atmosphere The concentration of carbon dioxide when measured in air that is part of an atmosphere. NMDCO_relaxed.owl PATO:0000033 biolink:NamedThing concentration of A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance. NMDCO_relaxed.owl ENVO:03000123 biolink:NamedThing concentration of nitrate and nitrite in liquid water The concentration of nitrate and nitrite when measured in liquid water. NMDCO_relaxed.owl ENVO:04000003 biolink:NamedThing concentration of carbon dioxide in soil The concentration of carbon dioxide when measured in soil. NMDCO_relaxed.owl ENVO:04000004 biolink:NamedThing concentration of carbon dioxide in air The concentration of carbon dioxide when measured in air. NMDCO_relaxed.owl ENVO:04000005 biolink:NamedThing concentration of carbon dioxide in freshwater The concentration of carbon dioxide when measured in freshwater. NMDCO_relaxed.owl ENVO:04000006 biolink:NamedThing concentration of carbon dioxide in seawater The concentration of carbon dioxide when measured in seawater. NMDCO_relaxed.owl ENVO:09000007 biolink:NamedThing concentration of carbon atom in environmental material The concentration of a carbon atom when measured in environmental material. NMDCO_relaxed.owl ENVO:09000008 biolink:NamedThing concentration of carbon atom in soil The concentration of a carbon atom when measured in soil. NMDCO_relaxed.owl ENVO:09000009 biolink:NamedThing concentration of carbon atom in water The concentration of a carbon atom when measured in water. NMDCO_relaxed.owl ENVO:09000016 biolink:NamedThing concentration of nitrogen atom in environmental material The concentration of a nitrogen atom when measured in environmental material. NMDCO_relaxed.owl ENVO:09000017 biolink:NamedThing concentration of nitrogen atom in soil The concentration of a nitrogen atom when measured in soil. NMDCO_relaxed.owl ENVO:09000018 biolink:NamedThing concentration of nitrogen atom in water The concentration of a nitrogen atom when measured in water. NMDCO_relaxed.owl ENVO:09000019 biolink:NamedThing concentration of chloride in water The concentration of a chloride when measured in water. NMDCO_relaxed.owl ENVO:09000022 biolink:NamedThing concentration of clay in soil The concentration of a clay when measured in soil. NMDCO_relaxed.owl ENVO:09000023 biolink:NamedThing concentration of slit in soil The concentration of a slit when measured in soil. NMDCO_relaxed.owl ENVO:09000024 biolink:NamedThing concentration of sand in soil The concentration of a sand when measured in soil. NMDCO_relaxed.owl ENVO:09000025 biolink:NamedThing concentration of gravel in soil The concentration of a gravel when measured in soil. NMDCO_relaxed.owl ENVO:09000026 biolink:NamedThing concentration of liquid water in soil The concentration of a liquid water when measured in soil. NMDCO_relaxed.owl ENVO:09000027 biolink:NamedThing concentration of salt in soil The concentration of a salt when measured in soil. NMDCO_relaxed.owl ENVO:09000030 biolink:NamedThing concentration of soil organic matter in soil The concentration of a soil organic matter when measured in soil. NMDCO_relaxed.owl ENVO:09000031 biolink:NamedThing concentration of pesticide in surface water The concentration of a pesticide when measured in surface water. NMDCO_relaxed.owl ENVO:09200006 biolink:NamedThing concentration of ammonium in soil The concentration of a ammonium when measured in soil. NMDCO_relaxed.owl ENVO:09200007 biolink:NamedThing concentration of nitrate in soil The concentration of a nitrate when measured in soil. NMDCO_relaxed.owl ENVO:09200020 biolink:NamedThing concentration of nitrate in groundwater The concentration of a nitrate when measured in groundwater. NMDCO_relaxed.owl ENVO:3100001 biolink:NamedThing concentration of Adenosine 5-triphosphate in liquid water The concentration of Adenosine 5-triphosphate when measured in liquid water. NMDCO_relaxed.owl ENVO:3100002 biolink:NamedThing concentration of alloxanthine in liquid water The concentration of alloxanthine when measured in liquid water. NMDCO_relaxed.owl ENVO:3100003 biolink:NamedThing concentration of alpha-carotene in liquid water The concentration of alpha-carotene when measured in liquid water. NMDCO_relaxed.owl ENVO:3100004 biolink:NamedThing concentration of ammonium in liquid water The concentration of ammonium when measured in liquid water. NMDCO_relaxed.owl ENVO:3100005 biolink:NamedThing concentration of bacteriochlorophyll a in liquid water The concentration of bacteriochlorophyll a when measured in liquid water. NMDCO_relaxed.owl ENVO:3100006 biolink:NamedThing concentration of beta-carotene in liquid water The concentration of beta-carotene when measured in liquid water. NMDCO_relaxed.owl ENVO:3100007 biolink:NamedThing concentration of carotene in liquid water The concentration of carotene when measured in liquid water. NMDCO_relaxed.owl ENVO:3100008 biolink:NamedThing concentration of chlorophyll a in liquid water The concentration of chlorophyll a when measured in liquid water. NMDCO_relaxed.owl ENVO:3100009 biolink:NamedThing concentration of chlorophyll b in liquid water The concentration of chlorophyll b when measured in liquid water. NMDCO_relaxed.owl ENVO:3100010 biolink:NamedThing concentration of chlorophyllide a in liquid water The concentration of chlorophyllide a when measured in liquid water. NMDCO_relaxed.owl ENVO:3100011 biolink:NamedThing concentration of dioxygen in liquid water The concentration of dioxygen when measured in liquid water. NMDCO_relaxed.owl ENVO:3100012 biolink:NamedThing concentration of divinyl chlorophyll a in liquid water The concentration of divinyl chlorophyll a when measured in liquid water. NMDCO_relaxed.owl ENVO:3100013 biolink:NamedThing concentration of divinyl chlorophyll b in liquid water The concentration of divinyl chlorophyll b when measured in liquid water. NMDCO_relaxed.owl ENVO:3100014 biolink:NamedThing concentration of fucoxanthin in liquid water The concentration of fucoxanthin when measured in liquid water. NMDCO_relaxed.owl ENVO:3100015 biolink:NamedThing concentration of Guanosine 5-triphosphate in liquid water The concentration of Guanosine 5-triphosphate when measured in liquid water. NMDCO_relaxed.owl ENVO:3100016 biolink:NamedThing concentration of hydrogen peroxide in liquid water The concentration of hydrogen peroxide when measured in liquid water. NMDCO_relaxed.owl ENVO:3100017 biolink:NamedThing concentration of hydrogen sulfide in liquid water The concentration of hydrogen sulfide when measured in liquid water. NMDCO_relaxed.owl ENVO:3100019 biolink:NamedThing concentration of lutein in liquid water The concentration of lutein when measured in liquid water. NMDCO_relaxed.owl ENVO:3100020 biolink:NamedThing concentration of methane in liquid water The concentration of methane when measured in liquid water. NMDCO_relaxed.owl ENVO:3100021 biolink:NamedThing concentration of neoxanthin in liquid water The concentration of neoxanthin when measured in liquid water. NMDCO_relaxed.owl ENVO:3100022 biolink:NamedThing concentration of nitrate in liquid water The concentration of nitrate when measured in liquid water. NMDCO_relaxed.owl ENVO:3100023 biolink:NamedThing concentration of nitrite in liquid water The concentration of nitrite when measured in liquid water. NMDCO_relaxed.owl ENVO:3100024 biolink:NamedThing concentration of nitrous oxide in liquid water The concentration of nitrous oxide when measured in liquid water. NMDCO_relaxed.owl ENVO:3100025 biolink:NamedThing concentration of peridinin in liquid water The concentration of peridinin when measured in liquid water. NMDCO_relaxed.owl ENVO:3100026 biolink:NamedThing concentration of phosphate in liquid water The concentration of phosphate when measured in liquid water. NMDCO_relaxed.owl ENVO:3100027 biolink:NamedThing concentration of silicate(4-) in liquid water The concentration of silicate(4-) when measured in liquid water. NMDCO_relaxed.owl ENVO:3100028 biolink:NamedThing concentration of violaxanthin in liquid water The concentration of violaxanthin when measured in liquid water. NMDCO_relaxed.owl ENVO:3100029 biolink:NamedThing concentration of zeaxanthin in liquid water The concentration of zeaxanthin when measured in liquid water. NMDCO_relaxed.owl ENVO:3100034 biolink:NamedThing concentration of silicic acid in liquid water The concentration of silicic acid when measured in liquid water. NMDCO_relaxed.owl ENVO:3100036 biolink:NamedThing concentration of chlorophyll in liquid water The concentration of chlorophyll when measured in liquid water. NMDCO_relaxed.owl ENVO:3100037 biolink:NamedThing concentration of nitrate in sea water The concentration of nitrate when measured in sea water. NMDCO_relaxed.owl ENVO:3100038 biolink:NamedThing concentration of phosphate in sea water The concentration of phosphate when measured in sea water. NMDCO_relaxed.owl ENVO:3100039 biolink:NamedThing concentration of silicic acid in sea water The concentration of silicic acid when measured in sea water. NMDCO_relaxed.owl ENVO:3100040 biolink:NamedThing concentration of ammonium in sea water The concentration of ammonium when measured in sea water. NMDCO_relaxed.owl ENVO:3100041 biolink:NamedThing concentration of nitrite in sea water The concentration of nitrite when measured in sea water. NMDCO_relaxed.owl ENVO:3100042 biolink:NamedThing concentration of carbon-13 atom in sea water The concentration of carbon-13 atom when measured in sea water. NMDCO_relaxed.owl ENVO:3100043 biolink:NamedThing concentration of carbon atom in sea water The concentration of carbon atom when measured in sea water. NMDCO_relaxed.owl ENVO:3100044 biolink:NamedThing concentration of chloroflurocarbon in sea water The concentration of chloroflurocarbon when measured in sea water. NMDCO_relaxed.owl ENVO:3100045 biolink:NamedThing concentration of tritium in sea water The concentration of tritium when measured in sea water. NMDCO_relaxed.owl ENVO:3100046 biolink:NamedThing concentration of helium-3 in sea water The concentration of helium-3 when measured in sea water. NMDCO_relaxed.owl ENVO:3100047 biolink:NamedThing concentration of carbon-14 atom in sea water The concentration of carbon-14 atom when measured in sea water. NMDCO_relaxed.owl ENVO:3100048 biolink:NamedThing concentration of sulfur hexafluoride in sea water The concentration of sulfur hexafluoride when measured in sea water. NMDCO_relaxed.owl ENVO:3100049 biolink:NamedThing concentration of calcium carbonate in sea water The concentration of calcium carbonate when measured in sea water. NMDCO_relaxed.owl ENVO:3100060 biolink:NamedThing concentration of dioxygen in sea water The concentration of dioxygen when measured in sea water. NMDCO_relaxed.owl ENVO:3200002 biolink:NamedThing concentration of bromine in lake water The concentration of bromine when measured in lake water. NMDCO_relaxed.owl ENVO:3200003 biolink:NamedThing concentration of cerium in lake water The concentration of cerium when measured in lake water. NMDCO_relaxed.owl ENVO:3200004 biolink:NamedThing concentration of cobalt in lake water The concentration of cobalt when measured in lake water. NMDCO_relaxed.owl ENVO:3200005 biolink:NamedThing concentration of dysprosium in lake water The concentration of dysprosium when measured in lake water. NMDCO_relaxed.owl ENVO:3200006 biolink:NamedThing concentration of europium in lake water The concentration of europium when measured in lake water. NMDCO_relaxed.owl ENVO:3200007 biolink:NamedThing concentration of gadolinium in lake water The concentration of gadolinium when measured in lake water. NMDCO_relaxed.owl ENVO:3200008 biolink:NamedThing concentration of lanthanum in lake water The concentration of lanthanum when measured in lake water. NMDCO_relaxed.owl ENVO:3200009 biolink:NamedThing concentration of lithium in lake water The concentration of lithium when measured in lake water. NMDCO_relaxed.owl ENVO:3200010 biolink:NamedThing concentration of methanesulfonic acid in lake water The concentration of methanesulfonic acid when measured in lake water. NMDCO_relaxed.owl ENVO:3200011 biolink:NamedThing concentration of molybdenum in lake water The concentration of molybdenum when measured in lake water. NMDCO_relaxed.owl ENVO:3200012 biolink:NamedThing concentration of neodymium in lake water The concentration of neodymium when measured in lake water. NMDCO_relaxed.owl ENVO:3200013 biolink:NamedThing concentration of niobium in lake water The concentration of niobium when measured in lake water. NMDCO_relaxed.owl ENVO:3200014 biolink:NamedThing concentration of praseodymium in lake water The concentration of praseodymium when measured in lake water. NMDCO_relaxed.owl ENVO:3200015 biolink:NamedThing concentration of samarium in lake water The concentration of samarium when measured in lake water. NMDCO_relaxed.owl ENVO:3200016 biolink:NamedThing concentration of silver in lake water The concentration of silver when measured in lake water. NMDCO_relaxed.owl ENVO:3200017 biolink:NamedThing concentration of thallium in lake water The concentration of thallium when measured in lake water. NMDCO_relaxed.owl ENVO:3200018 biolink:NamedThing concentration of tin in lake water The concentration of tin when measured in lake water. NMDCO_relaxed.owl ENVO:3200019 biolink:NamedThing concentration of titanium in lake water The concentration of titanium when measured in lake water. NMDCO_relaxed.owl ENVO:3200020 biolink:NamedThing concentration of yttrium in lake water The concentration of yttrium when measured in lake water. NMDCO_relaxed.owl ENVO:3200021 biolink:NamedThing concentration of bromine in water ice The concentration of bromine when measured in water ice. NMDCO_relaxed.owl ENVO:3200022 biolink:NamedThing concentration of cerium in water ice The concentration of cerium when measured in water ice. NMDCO_relaxed.owl ENVO:3200023 biolink:NamedThing concentration of cobalt in water ice The concentration of cobalt when measured in water ice. NMDCO_relaxed.owl ENVO:3200024 biolink:NamedThing concentration of dysprosium in water ice The concentration of dysprosium when measured in water ice. NMDCO_relaxed.owl ENVO:3200025 biolink:NamedThing concentration of europium in water ice The concentration of europium when measured in water ice. NMDCO_relaxed.owl ENVO:3200026 biolink:NamedThing concentration of gadolinium in water ice The concentration of gadolinium when measured in water ice. NMDCO_relaxed.owl ENVO:3200027 biolink:NamedThing concentration of lanthanum in water ice The concentration of lanthanum when measured in water ice. NMDCO_relaxed.owl ENVO:3200028 biolink:NamedThing concentration of lithium in water ice The concentration of lithium when measured in water ice. NMDCO_relaxed.owl ENVO:3200029 biolink:NamedThing concentration of methanesulfonic acid in water ice The concentration of methanesulfonic acid when measured in water ice. NMDCO_relaxed.owl ENVO:3200030 biolink:NamedThing concentration of molybdenum in water ice The concentration of molybdenum when measured in water ice. NMDCO_relaxed.owl ENVO:3200031 biolink:NamedThing concentration of neodymium in water ice The concentration of neodymium when measured in water ice. NMDCO_relaxed.owl ENVO:3200032 biolink:NamedThing concentration of niobium in water ice The concentration of niobium when measured in water ice. NMDCO_relaxed.owl ENVO:3200033 biolink:NamedThing concentration of praseodymium in water ice The concentration of praseodymium when measured in water ice. NMDCO_relaxed.owl ENVO:3200034 biolink:NamedThing concentration of samarium in water ice The concentration of samarium when measured in water ice. NMDCO_relaxed.owl ENVO:3200035 biolink:NamedThing concentration of silver in water ice The concentration of silver when measured in water ice. NMDCO_relaxed.owl ENVO:3200036 biolink:NamedThing concentration of thallium in water ice The concentration of thallium when measured in water ice. NMDCO_relaxed.owl ENVO:3200037 biolink:NamedThing concentration of tin in water ice The concentration of tin when measured in water ice. NMDCO_relaxed.owl ENVO:3200038 biolink:NamedThing concentration of titanium in water ice The concentration of titanium when measured in water ice. NMDCO_relaxed.owl ENVO:3200039 biolink:NamedThing concentration of yttrium in water ice The concentration of yttrium when measured in water ice. NMDCO_relaxed.owl ENVO:3200040 biolink:NamedThing concentration of bromine in snow The concentration of bromine when measured in snow. NMDCO_relaxed.owl ENVO:3200041 biolink:NamedThing concentration of cerium in snow The concentration of cerium when measured in snow. NMDCO_relaxed.owl ENVO:3200042 biolink:NamedThing concentration of cobalt in snow The concentration of cobalt when measured in snow. NMDCO_relaxed.owl ENVO:3200043 biolink:NamedThing concentration of dysprosium in snow The concentration of dysprosium when measured in snow. NMDCO_relaxed.owl ENVO:3200044 biolink:NamedThing concentration of europium in snow The concentration of europium when measured in snow. NMDCO_relaxed.owl ENVO:3200045 biolink:NamedThing concentration of gadolinium in snow The concentration of gadolinium when measured in snow. NMDCO_relaxed.owl ENVO:3200046 biolink:NamedThing concentration of lanthanum in snow The concentration of lanthanum when measured in snow. NMDCO_relaxed.owl ENVO:3200047 biolink:NamedThing concentration of lithium in snow The concentration of lithium when measured in snow. NMDCO_relaxed.owl ENVO:3200048 biolink:NamedThing concentration of methanesulfonic acid in snow The concentration of methanesulfonic acid when measured in snow. NMDCO_relaxed.owl ENVO:3200049 biolink:NamedThing concentration of molybdenum in snow The concentration of molybdenum when measured in snow. NMDCO_relaxed.owl ENVO:3200050 biolink:NamedThing concentration of neodymium in snow The concentration of neodymium when measured in snow. NMDCO_relaxed.owl ENVO:3200051 biolink:NamedThing concentration of niobium in snow The concentration of niobium when measured in snow. NMDCO_relaxed.owl ENVO:3200052 biolink:NamedThing concentration of praseodymium in snow The concentration of praseodymium when measured in snow. NMDCO_relaxed.owl ENVO:3200053 biolink:NamedThing concentration of samarium in snow The concentration of samarium when measured in snow. NMDCO_relaxed.owl ENVO:3200054 biolink:NamedThing concentration of silver in snow The concentration of silver when measured in snow. NMDCO_relaxed.owl ENVO:3200055 biolink:NamedThing concentration of thallium in snow The concentration of thallium when measured in snow. NMDCO_relaxed.owl ENVO:3200056 biolink:NamedThing concentration of tin in snow The concentration of tin when measured in snow. NMDCO_relaxed.owl ENVO:3200057 biolink:NamedThing concentration of titanium in snow The concentration of titanium when measured in snow. NMDCO_relaxed.owl ENVO:3200058 biolink:NamedThing concentration of yttrium in snow The concentration of yttrium when measured in snow. NMDCO_relaxed.owl ENVO:3200059 biolink:NamedThing concentration of urea in liquid water The concentration of urea when measured in liquid water. NMDCO_relaxed.owl ENVO:3200060 biolink:NamedThing concentration of oxygen in soil The concentration of oxygen when measured in soil. NMDCO_relaxed.owl ENVO:3200061 biolink:NamedThing concentration of manganese molecular entity in soil The concentration of manganese molecular entity when measured in soil. NMDCO_relaxed.owl ENVO:3200062 biolink:NamedThing concentration of iron molecular entity in soil The concentration of iron molecular entity when measured in soil. NMDCO_relaxed.owl ENVO:3200063 biolink:NamedThing concentration of aluminium molecular entity in soil The concentration of aluminium molecular entity when measured in soil. NMDCO_relaxed.owl ENVO:3200064 biolink:NamedThing concentration of magnesium molecular entity in soil The concentration of magnesium molecular entity when measured in soil. NMDCO_relaxed.owl ENVO:3200065 biolink:NamedThing concentration of sodium molecular entity in soil The concentration of sodium molecular entity when measured in soil. NMDCO_relaxed.owl ENVO:3200066 biolink:NamedThing concentration of organic nitrogen anion in soil The concentration of organic nitrogen anion when measured in soil. NMDCO_relaxed.owl ENVO:3200067 biolink:NamedThing concentration of organophosphorus compound in soil The concentration of organophosphorus compound when measured in soil. NMDCO_relaxed.owl ENVO:3200068 biolink:NamedThing concentration of phosphorus molecular entity in soil The concentration of phosphorus molecular entity when measured in soil. NMDCO_relaxed.owl ENVO:3200069 biolink:NamedThing concentration of potassium molecular entity in soil The concentration of potassium molecular entity when measured in soil. NMDCO_relaxed.owl ENVO:3200070 biolink:NamedThing concentration of calcium carbonate in soil The concentration of calcium carbonate when measured in soil. NMDCO_relaxed.owl ENVO:3200071 biolink:NamedThing concentration of organic molecular entity in soil The concentration of organic molecular entity when measured in soil. NMDCO_relaxed.owl ENVO:3200072 biolink:NamedThing concentration of tetraphosphorus decaoxide in soil The concentration of tetraphosphorus decaoxide when measured in soil. NMDCO_relaxed.owl ENVO:3200073 biolink:NamedThing concentration of sulfate in soil The concentration of sulfate when measured in soil. NMDCO_relaxed.owl ENVO:3200074 biolink:NamedThing concentration of exchangeable potassium in soil The concentration of exchangeable potassium when measured in soil. NMDCO_relaxed.owl ENVO:3200075 biolink:NamedThing concentration of residual water in soil The concentration of residual water when measured in soil. NMDCO_relaxed.owl ENVO:3200076 biolink:NamedThing concentration of exchangeable calcium in soil The concentration of exchangeable calcium when measured in soil. NMDCO_relaxed.owl PATO:0001159 biolink:NamedThing concentrated A concentration quality inhering in a bearer by virtue of the bearer's exhibiting concentration. NMDCO_relaxed.owl PATO:0001161 biolink:NamedThing diluted A concentration which relatively low. NMDCO_relaxed.owl PATO:0001655 biolink:NamedThing osmolarity A concentration quality inhering in a bearer by virtue of the bearer's amount of osmoles of solute per liter of solution. NMDCO_relaxed.owl PATO:0001842 biolink:NamedThing acidity A concentration quality inhering in a bearer by virtue of the bearer's containing acid (hydrogen ions). NMDCO_relaxed.owl ENVO:01001867 biolink:NamedThing well stimulation A well intervention during which the production of an oil or gas well is increased by improving the flow of hydrocarbons from the reservoir into the well bore. NMDCO_relaxed.owl ENVO:01001868 biolink:NamedThing hydraulic fracturing A well stimulation technique during which bedrock formations are fractured through the injection of pressurized proppant-bearing liquid into a well-bore. NMDCO_relaxed.owl ENVO:01001875 biolink:NamedThing debris flow following rainfall A debris flow which is causally preceded by rainfall. NMDCO_relaxed.owl ENVO:01001876 biolink:NamedThing graupel Snow which is composed of heavily rimed particles typically 2 to 5 millimeters in diameter (0.1 to 0.2 inch). NMDCO_relaxed.owl ENVO:03000000 biolink:NamedThing neve Partially compacted granular snow, which has undergone several cycles of melting and refreezing while being compacted, usually found on the atmosphere-exposed surface of a glacier. NMDCO_relaxed.owl ENVO:03000002 biolink:NamedThing firn Granular snow which contains a proportion of fused granules formed through melting and re-thawing while being compacted by the weight of overlying material and which contains interconnected gaseous pores. NMDCO_relaxed.owl ENVO:03000027 biolink:NamedThing powdery snow Uncompacted snow containing trapped atmospheric gases. NMDCO_relaxed.owl ENVO:03000108 biolink:NamedThing slab snow Snow which is cohesive, hard and overlies weaker snow. NMDCO_relaxed.owl ENVO:01001877 biolink:NamedThing transient tracer NMDCO_relaxed.owl ENVO:01001878 biolink:NamedThing oceanic transient tracer A transient tracer role which inheres in chemical entities in seawater. NMDCO_relaxed.owl ENVO:01001883 biolink:NamedThing hoar crystal A water ice crystal which is a part of a deposit of hoarfrost and which only grows by desublimation. NMDCO_relaxed.owl ENVO:03520007 biolink:NamedThing snow crystal A water ice crystal which is constituted by water molecules aligned in a hexagonal array. NMDCO_relaxed.owl ENVO:01003006 biolink:NamedThing rainy day A day during which water-based rainfall occurs. NMDCO_relaxed.owl ENVO:01003011 biolink:NamedThing convective A physical quality of a process which is characteristic of processes that transport material within a volume due to the combined effects of material property heterogeneity and body forces across that volume. NMDCO_relaxed.owl PATO:0002062 biolink:NamedThing physical quality of a process NMDCO_relaxed.owl ENVO:01003012 biolink:NamedThing advective A physical quality of a process which is characteristic of process that transport material without, themselves, changing the qualities of those materials or the processes that are unfolding within them. NMDCO_relaxed.owl PATO:0000080 biolink:NamedThing amplitude A physical quality of a process inhering in a bearer by virtue of the size of the bearer's maximum displacement from the 'normal' position, when periodic motion is taking place. NMDCO_relaxed.owl PATO:0001309 biolink:NamedThing duration A process quality inhering in a bearer by virtue of the bearer's magnitude of the temporal extent between the starting and ending point. NMDCO_relaxed.owl PATO:0002323 biolink:NamedThing temporal distribution quality A temporal distribution pattern of process occurrences within a regulation/reference process. NMDCO_relaxed.owl ENVO:01003015 biolink:NamedThing irradiation by ionizing radiation Irradiation during which a material entity receives energy through ionizing radiation. NMDCO_relaxed.owl ENVO:01003016 biolink:NamedThing irradiation by non-ionizing radiation Irradiation during which a material entity receives energy through non-ionizing radiation. NMDCO_relaxed.owl ENVO:01003017 biolink:NamedThing irradiation by photosynthetically active radiation Irradiation during which a material entity receives energy through photosynthetically active radiation. NMDCO_relaxed.owl ENVO:01003018 biolink:NamedThing electromagnetic wave energy Wave energy which inheres in perpendicular electric and magnetic fields and which is realised when they oscillate and propagate. NMDCO_relaxed.owl ENVO:01003019 biolink:NamedThing wave energy Energy which inheres in a wave and is realised during its propagation. NMDCO_relaxed.owl ENVO:2000028 biolink:NamedThing mechanical wave energy Wave energy which inheres in an elastic material and is realised when a deformational wave passes through that material. NMDCO_relaxed.owl ENVO:06105265 biolink:NamedThing net shortwave radiation Energy which has been absorbed by an astronomical body or its parts following that body's irradiation by shortwave radiation from a star. NMDCO_relaxed.owl ENVO:2000016 biolink:NamedThing potential energy Energy possessed by an object because of its position relative to other objects, stresses within itself, its electric charge, or other factors. NMDCO_relaxed.owl ENVO:2000017 biolink:NamedThing kinetic energy Energy which is realised through motion. NMDCO_relaxed.owl ENVO:2000018 biolink:NamedThing mixed potential and kinetic energy Energy which is the sum of 1) kinetic energy and 2) potential energy. NMDCO_relaxed.owl ENVO:02000000 biolink:NamedThing hypodermic needle A hypodermic needle is a medical instrument made from a hollow needle. It is commonly used with a syringe to inject substances into the body of an organism. NMDCO_relaxed.owl ENVO:02000002 biolink:NamedThing bedclothing Bedclothing is a textile covering used on a bed as a sheet, blanket, or pillowcase. NMDCO_relaxed.owl ENVO:02000058 biolink:NamedThing cloth A textile comprised of a pliable material made usually by weaving, felting, or knitting natural or synthetic fibers and filaments. NMDCO_relaxed.owl ENVO:02000044 biolink:NamedThing siliceous ooze Siliceous ooze is a marine sediment composed of the debris of plankton with silica shells, such as diatoms and radiolaria. This ooze is limited to areas with high biological productivity, such as the polar oceans, and upwelling zones near the equator. The least common type of sediment, it covers only 15% of the ocean floor. It accumulates at a slower rate than calcareous ooze: 0.2-1 cm / 1000 yr. NMDCO_relaxed.owl ENVO:02000045 biolink:NamedThing red clay Red clay, also known as pelagic clay, accumulates in the deepest and most remote areas of the ocean. Containing less than 30% biogenic material, its composition is a varied mix of very fine quartz and clay minerals, authigenic deposits precipitated directly from seawater, and micrometeorites. Though called "red" because it sometimes takes the color of oxidized iron minerals, it is usually brownish in color. Its ultimate origin is uncertain, but red clay seems to be mostly derived from distant rivers, and windblown dust. Covering 38% of the ocean floor, it accumulates more slowly than any other sediment type, at only 0.1-0.5 cm / 1000 yr. NMDCO_relaxed.owl ENVO:02000046 biolink:NamedThing calcareous ooze Calcareous ooze is a marine sediment composed primarily of the shells--also known as tests--of foraminifera, coccolithophores, and pteropods. This is the most common pelagic sediment by area, covering 48% of the world ocean's floor. This type of ooze is limited to depths above the Carbonate Compensation Depth at time of burial. It accumulates more rapidly than any other pelagic sediment type, with a rate that varies from 0.3 - 5 cm / 1000 yr. NMDCO_relaxed.owl ENVO:02000047 biolink:NamedThing animal feed Food material which can be used to meet nutritional requirements of animals, particularly livestock such as cattle, goats, sheep, horses, chickens and pigs. NMDCO_relaxed.owl ENVO:02000055 biolink:NamedThing plant feed Food material which can be used to meet nutritional requirements of plants. NMDCO_relaxed.owl FOODON:00001002 biolink:NamedThing food product Food material for humans and animals which is processed with the intention that it be consumable as a whole or added to other food products. NMDCO_relaxed.owl FOODON:03400361 biolink:NamedThing agency food product type An agency food product type is a class of food product defined by an agency or consortium. NMDCO_relaxed.owl ENVO:02000048 biolink:NamedThing contaminated animal feed Contaminated animal feed is an animal feed that has become contaminated with or come contact with microorganisms or toxic chemicals. NMDCO_relaxed.owl ENVO:02000054 biolink:NamedThing bone meal A mixture of crushed and coarsely ground bones that is used as an organic fertilizer for plants and formerly in animal feed. NMDCO_relaxed.owl ENVO:02000081 biolink:NamedThing letter A written message from one person to another addressed to a person or organization. NMDCO_relaxed.owl IAO:0000030 biolink:NamedThing information content entity A generically dependent continuant that is about some thing. NMDCO_relaxed.owl IAO:0000033 biolink:NamedThing directive information entity An information content entity whose concretizations indicate to their bearer how to realize them in a process. NMDCO_relaxed.owl IAO:0000308 biolink:NamedThing figure An information content entity consisting of a two dimensional arrangement of information content entities such that the arrangement itself is about something. NMDCO_relaxed.owl ENVO:02000095 biolink:NamedThing uranium ore Ore which contains uranium. NMDCO_relaxed.owl ENVO:02000096 biolink:NamedThing iron ore NMDCO_relaxed.owl ENVO:02000097 biolink:NamedThing gold ore NMDCO_relaxed.owl ENVO:02000098 biolink:NamedThing platinum ore NMDCO_relaxed.owl ENVO:02000111 biolink:NamedThing copper ore NMDCO_relaxed.owl ENVO:02000102 biolink:NamedThing fibrous glass dust NMDCO_relaxed.owl ENVO:02000106 biolink:NamedThing asbestos dust NMDCO_relaxed.owl ENVO:02000107 biolink:NamedThing grain dust Dust that comes from grain and all the other substances associated with its cultivation & harvesting. NMDCO_relaxed.owl ENVO:02000108 biolink:NamedThing cotton dust NMDCO_relaxed.owl ENVO:02000113 biolink:NamedThing welding fume NMDCO_relaxed.owl ENVO:02000114 biolink:NamedThing paraffin wax fume NMDCO_relaxed.owl ENVO:02000115 biolink:NamedThing vanadium fume Respirable vapor of vanadium. NMDCO_relaxed.owl ENVO:02000120 biolink:NamedThing zinc chloride fume NMDCO_relaxed.owl ENVO:02000116 biolink:NamedThing aluminum welding fume NMDCO_relaxed.owl ENVO:02000117 biolink:NamedThing natural wax A wax that is naturally synthesized by a plant or animal. NMDCO_relaxed.owl ENVO:02000118 biolink:NamedThing paraffin wax A white or colourless soft solid derivable from petroleum, coal or oil shale, that consists of a mixture of hydrocarbon molecules containing between twenty and forty carbon atoms. NMDCO_relaxed.owl ENVO:02000119 biolink:NamedThing oil shale An organic-rich fine-grained sedimentary rock containing kerogen from which liquid hydrocarbons called shale oil can be produced. NMDCO_relaxed.owl ENVO:02000124 biolink:NamedThing lead paint Paint that contains lead. NMDCO_relaxed.owl ENVO:03510029 biolink:NamedThing primer (paint) A paint product which adheres to surfaces and forms a binding layer, preparing it to receive paint. NMDCO_relaxed.owl ENVO:03510031 biolink:NamedThing oil-based paint A slow-drying paint that consists of particles of pigment suspended in a drying oil, commonly linseed oil. NMDCO_relaxed.owl ENVO:03510032 biolink:NamedThing acrylic paint A water soluble, fast-drying paint made of pigment suspended in acrylic polymer emulsion. NMDCO_relaxed.owl ENVO:03510033 biolink:NamedThing luminescent paint A paint that exhibits luminescence, giving off visible light through fluorescence, phosphorescence, or radioluminescence. NMDCO_relaxed.owl ENVO:02000128 biolink:NamedThing fly ash A very fine, powdery material composed mostly of silica made from the burning of finely ground coal in a boiler. NMDCO_relaxed.owl ENVO:02000129 biolink:NamedThing bottom ash a coarse, angular ash particle that is too large to be carried up into the smoke stacks so it forms in the bottom of the coal furnace. NMDCO_relaxed.owl ENVO:02000130 biolink:NamedThing boiler slag molten bottom ash from slag tap and cyclone type furnaces that turns into pellets that have a smooth glassy appearance after it is cooled with water. NMDCO_relaxed.owl ENVO:02000131 biolink:NamedThing flue gas desulfurization material a material leftover from the process of reducing sulfur dioxide emissions from a coal-fired boiler that can be a wet sludge consisting of calcium sulfite or calcium sulfate or a dry powered material that is a mixture of sulfites and sulfates. NMDCO_relaxed.owl ENVO:02000134 biolink:NamedThing thermal nuclear reactor A nuclear reactor which uses a neutron moderator to slow neutrons until they approach the average kinetic energy of the surrounding particles. NMDCO_relaxed.owl ENVO:02000137 biolink:NamedThing nuclear power reactor A nuclear reactor which is used as a source of power. NMDCO_relaxed.owl ENVO:02000135 biolink:NamedThing fast neutron reactor A nuclear reactor in which the fission chain reaction is sustained by fast neutrons. NMDCO_relaxed.owl ENVO:02000136 biolink:NamedThing research nuclear reactor A nuclear reactor which serves primarily as a neutron source for purposes other than power. NMDCO_relaxed.owl ENVO:02000142 biolink:NamedThing petroleum oil refinery A refinery which is capable of processing petroleum oil. NMDCO_relaxed.owl ENVO:02000143 biolink:NamedThing sugar refinery A refinery which is capable of processing raw sugar. Raw sugar is processed from cane or beets into white refined sugar. NMDCO_relaxed.owl ENVO:02000144 biolink:NamedThing natural gas processing plant A refinery which is capable of processing natural gas. Natural-gas processing encompasses a range of industrial processes designed to purify raw natural gas by removing impurities, contaminants and higher molecular mass hydrocarbons to produce what is known as pipeline quality dry natural gas NMDCO_relaxed.owl ENVO:02000147 biolink:NamedThing refinement process A planned material transformation process which takes as input a material and removes impurities. NMDCO_relaxed.owl ENVO:02000148 biolink:NamedThing Haber-Bosch process A chemical engineering process that produces ammonia en masse via artificial nitrogen fixation. NMDCO_relaxed.owl ENVO:02000149 biolink:NamedThing hydrogen production process A chemical engineering process which generates hydrogen gas. NMDCO_relaxed.owl ENVO:02000151 biolink:NamedThing natural nuclear fission reactor A uranium deposit where self-sustaining nuclear chain reactions have occurred. NMDCO_relaxed.owl ENVO:02500011 biolink:NamedThing afforestation Establishment of a new forest by seeding or planting of nonforested land. NMDCO_relaxed.owl ENVO:02500013 biolink:NamedThing reforestation The planting of trees in areas in where forests have previously been cleared. NMDCO_relaxed.owl ENVO:02500024 biolink:NamedThing accumulation of toxins from algal bloom process NMDCO_relaxed.owl ENVO:02500025 biolink:NamedThing degradation of toxins from algal bloom process NMDCO_relaxed.owl ENVO:02500035 biolink:NamedThing transpiration Transpiration is the process of water movement through a plant and its evaporation from aerial parts of that plant, such as from leaves but also from stems and flowers. NMDCO_relaxed.owl ENVO:02500043 biolink:NamedThing pollution monitoring A monitoring process that assays the level of environmental pollutants to determine the presence of effect of environmental pollution. NMDCO_relaxed.owl ENVO:03000005 biolink:NamedThing erosionally enriched glacial ice Glacial ice which contains material liberated during a glacial erosion process. NMDCO_relaxed.owl ENVO:03000012 biolink:NamedThing glacial transport process A material transport process during which the snow and ice constituting a glacier, and anything contained within it, is transported down a slope by gravitation. NMDCO_relaxed.owl ENVO:03000029 biolink:NamedThing glacial ice gain A process during which the mass of ice constituting a glacier increases. NMDCO_relaxed.owl ENVO:03000011 biolink:NamedThing ice gain A material accumulation process during which the mass of an existing ice mass increases. NMDCO_relaxed.owl ENVO:03000031 biolink:NamedThing iceberg calving process A process during which a part of a glacier breaks away from the main mass as an iceberg. NMDCO_relaxed.owl ENVO:03000037 biolink:NamedThing glacial ice ablation zone An ablation zone which is part of a glacier. NMDCO_relaxed.owl ENVO:03000039 biolink:NamedThing cryoconite hole A vertical thaw hole within an ice mass, formed as a result of ice melt associated with local temperature increases, due to increased absorption of solar radiation by cryoconite deposits. NMDCO_relaxed.owl ENVO:03000044 biolink:NamedThing sea ice formation process A material transformation process during which seawater freezes into sea ice. NMDCO_relaxed.owl ENVO:03000056 biolink:NamedThing new ice formation process An ice formation process during which water is frozen into a form of new ice such as frazil, grease ice, slush, or shuga. NMDCO_relaxed.owl ENVO:03000047 biolink:NamedThing frazil ice formation A new ice formation process during which small, needle-like crystals consisting of nearly pure fresh water, form due to the freezing of open, turbulent, supercooled water. NMDCO_relaxed.owl ENVO:03000078 biolink:NamedThing slush formation process A new ice formation process in which slush ice is formed. NMDCO_relaxed.owl ENVO:03000079 biolink:NamedThing shuga formation process A new ice formation process in which shuga is formed. NMDCO_relaxed.owl ENVO:03000050 biolink:NamedThing atmosphere-exposed melt pond A melt pond which has a surface exposed to the atmosphere. NMDCO_relaxed.owl ENVO:03000051 biolink:NamedThing ice-encased melt pond A melt pond which is completely encased in ice and thus not directly exposed to the atmosphere or underlying water. NMDCO_relaxed.owl ENVO:03000118 biolink:NamedThing atmosphere and water column exposed melt pond A melt pond which and is exposed to the atmosphere and to a lesser degree water underlying the ice mass which contains it. NMDCO_relaxed.owl ENVO:03000119 biolink:NamedThing water column exposed melt pond A melt pond which is formed close to that part of an ice mass which is in contact with some underlying water body, and which has channels connecting it to that water body. NMDCO_relaxed.owl ENVO:03000058 biolink:NamedThing nilas formation process A sea ice formation process during which new ice crystals freeze together, forming nilas, a thin, elastic, continuous, ice sheet of a transparent gray color. NMDCO_relaxed.owl ENVO:03000059 biolink:NamedThing young ice formation process A sea ice formation process during which water freezes to the bottom of an existing nilas ice floe creating a thicker ice floe known as young ice. NMDCO_relaxed.owl ENVO:03000060 biolink:NamedThing first year ice formation process A sea ice formation process during which seawater freezes onto young ice during the cold season, forming first year ice. NMDCO_relaxed.owl ENVO:03000061 biolink:NamedThing second year ice formation A sea ice formation process during which seawater freezes onto first year ice during the cold season, forming second year sea ice. NMDCO_relaxed.owl ENVO:03000062 biolink:NamedThing multiyear ice formation process A sea ice formation process during which seawater freezes into second year ice during the cold season, forming multiyear ice. NMDCO_relaxed.owl ENVO:03000066 biolink:NamedThing sea ice floe An ice floe which is formed from frozen sea water, and floats upon the surface of a marine water body. NMDCO_relaxed.owl ENVO:03000067 biolink:NamedThing pancake ice A sea ice floe which has a rounded or circular shape and raised rims. NMDCO_relaxed.owl ENVO:03000068 biolink:NamedThing nilas A sea ice floe which is thin, elastic, continuous, and of a transparent gray color, which results from the freezing of new ice. NMDCO_relaxed.owl ENVO:03000069 biolink:NamedThing young ice A sea ice floe which is inflexible and thicker than nilas. NMDCO_relaxed.owl ENVO:03000082 biolink:NamedThing thermokarst lake A freshwater lake which fills a depression formed by the erosion of thermokarst caused by permafrost thaw. NMDCO_relaxed.owl ENVO:03000083 biolink:NamedThing methane-releasing thermokarst lake A thermokarst lake through which methane gas released from thawing permafrost, or other methane stores, rises and escapes to the atmosphere. NMDCO_relaxed.owl ENVO:03000091 biolink:NamedThing permafrost methane explosion An explosion during which methane-rich gas trapped in permafrost combusts. NMDCO_relaxed.owl ENVO:03000097 biolink:NamedThing warm season A season during which the average temperature of a planetary part exceeds that of all other seasons it endures during a season generating process. NMDCO_relaxed.owl ENVO:03000098 biolink:NamedThing cold season A season during which the average temperature of a planetary part is below that of all other seasons it endures during a season generating process. NMDCO_relaxed.owl ENVO:03000129 biolink:NamedThing monsoon season A season during which changes in atmospheric circulation associated with the asymmetric heating of land and sea cause moisture to be brought inland by monsoon winds, leading to increased rainfall as moisture-laden air rises and cools over land. NMDCO_relaxed.owl ENVO:03000101 biolink:NamedThing solid-phase sintering A compaction process during which a material entity subjected to heat and/or pressure is compacted into a solid mass without undergoing melting. NMDCO_relaxed.owl ENVO:06105202 biolink:NamedThing soil compaction process Soil compaction is a compaction process during which the bulk density of soil increases and/or its porosity decreases due to externally or internally applied loads. NMDCO_relaxed.owl ENVO:03000103 biolink:NamedThing aeolian transport of snow An aeolian transport process during which powdery snow is displaced and moved. NMDCO_relaxed.owl ENVO:03000104 biolink:NamedThing snow drift formation An accumulation process during which a powdery snow carried on the wind settles on a solid surface, forming a mound. NMDCO_relaxed.owl ENVO:03000106 biolink:NamedThing powdery snow avalanche An avalanche during which powdery snow rapidly flows down a sloping surface. NMDCO_relaxed.owl ENVO:03000112 biolink:NamedThing snow drift An accumulation of powdery snow which was transported and deposited via a snow drifting process. NMDCO_relaxed.owl ENVO:03000113 biolink:NamedThing snow patch An accumulation of snow and firn which rests upon land. NMDCO_relaxed.owl ENVO:03000116 biolink:NamedThing snowpack A snow mass which is large enough, and persists long enough, to undergo compaction under its own weight, leading to layer-like structural differentiation. NMDCO_relaxed.owl ENVO:03000114 biolink:NamedThing seasonal snow patch A snow patch which forms during a cold season and melts away during the succeeding warm season. NMDCO_relaxed.owl ENVO:03000115 biolink:NamedThing perennial snow patch A snow patch which persists through at least one seasonal cycle. NMDCO_relaxed.owl ENVO:03000120 biolink:NamedThing subglacial lake A lake which is situated beneath a glacier. NMDCO_relaxed.owl ENVO:03000128 biolink:NamedThing acidic water-based rain Water-based rain which has increased acidity. NMDCO_relaxed.owl ENVO:03400010 biolink:NamedThing freezing rain Water-based rain which is composed of supercooled water droplets, which freeze on contact with surfaces. NMDCO_relaxed.owl ENVO:03000132 biolink:NamedThing firebreak A woodland clearing which is large enough to starve land fires of fuel, impeding their progress through wooded areas. NMDCO_relaxed.owl ENVO:03000134 biolink:NamedThing WMO blizzard A blizzard which 1) lasts at least 3 hours, 2) combines below freezing temperatures and very strong wind, laden with blowing snow. NMDCO_relaxed.owl ENVO:03000135 biolink:NamedThing NSIDC blizzard A blizzard which has 1) winds of 35 miles per hour (approximately 56 kilometers per hour), 2) lasts for a period of at least three hours, and 3) occurs in extremely cold temperatures. NMDCO_relaxed.owl ENVO:03000136 biolink:NamedThing winter blizzard A blizzard which occurs in winter. NMDCO_relaxed.owl ENVO:03000142 biolink:NamedThing snow water equivalent A depth which inheres in a layer of liquid water derived from the complete melting a mass of snow contained in an area. NMDCO_relaxed.owl PATO:0001595 biolink:NamedThing depth A 1-D extent quality inhering in a bearer by virtue of the bearer's downward or backward or inward dimension. NMDCO_relaxed.owl ENVO:06105225 biolink:NamedThing soil layer top depth The depth of the top part of a soil layer. NMDCO_relaxed.owl ENVO:06105226 biolink:NamedThing soil layer bottom depth The depth of the bottom part of a soil layer. NMDCO_relaxed.owl ENVO:09200023 biolink:NamedThing depth of snow The depth of some snow. NMDCO_relaxed.owl ENVO:3100031 biolink:NamedThing depth of water The depth of some water. NMDCO_relaxed.owl PATO:0001472 biolink:NamedThing decreased depth A depth which is relatively low. NMDCO_relaxed.owl PATO:0001596 biolink:NamedThing increased depth A depth quality which is relatively high. NMDCO_relaxed.owl PATO:0045052 biolink:NamedThing normal depth A depth quality which is relatively normal or average NMDCO_relaxed.owl ENVO:03000144 biolink:NamedThing planetary cryosphere A cryosphere which is part of a planet. NMDCO_relaxed.owl ENVO:03000147 biolink:NamedThing thickness of snow The thickness of some snow. NMDCO_relaxed.owl PATO:0000915 biolink:NamedThing thickness A 1-D extent quality which is equal to the dimension through an object as opposed to its length or width. NMDCO_relaxed.owl ENVO:09200029 biolink:NamedThing thickness of topsoil The thickness of some topsoil. NMDCO_relaxed.owl PATO:0000591 biolink:NamedThing increased thickness A thickness which is relatively high. NMDCO_relaxed.owl PATO:0000592 biolink:NamedThing decreased thickness A thickness which is relatively low. NMDCO_relaxed.owl PATO:0001781 biolink:NamedThing irregular thickness A thickness quality which lacks pattern. NMDCO_relaxed.owl ENVO:03400001 biolink:NamedThing area of alpine tundra An area of tundra which is present in a region subject to alpine conditions. NMDCO_relaxed.owl ENVO:03400002 biolink:NamedThing area of polar tundra An area of tundra which is present in a region subject to polar conditions. NMDCO_relaxed.owl ENVO:03400004 biolink:NamedThing heavy snowfall Snowfall which has an increased rate. NMDCO_relaxed.owl ENVO:03400006 biolink:NamedThing lake-effect snowfall Snowfall which 1) is localized, 2) is convective, and 3) occurs as a result of a cold, dry air mass absorbing heat and moisture as it flows over a lake with warmer waters. NMDCO_relaxed.owl ENVO:03400008 biolink:NamedThing lambing storm A snowfall which occurs during springtime and is of low intensity. NMDCO_relaxed.owl ENVO:03500001 biolink:NamedThing playground A park which has been designed for the recreation of children. NMDCO_relaxed.owl ENVO:03500002 biolink:NamedThing public park A park which is owned by a governmental or state entity and which is accessible by its citizenry (i.e. the public). NMDCO_relaxed.owl ENVO:03500008 biolink:NamedThing safe environment for human presence An environment in which humans have a low likelihood of being harmed or killed. NMDCO_relaxed.owl ENVO:03501100 biolink:NamedThing ferry A merchant vessel which is used to carry passengers, vehicles, or cargo across a body of water. NMDCO_relaxed.owl ENVO:03501105 biolink:NamedThing merchant vessel A transport boat which can be hired. NMDCO_relaxed.owl ENVO:03501108 biolink:NamedThing passenger train A train which is capable of and used for passenger transport. NMDCO_relaxed.owl ENVO:03501114 biolink:NamedThing public train A train which is owned by a government or other form of public representation. NMDCO_relaxed.owl ENVO:03501351 biolink:NamedThing ground transport A constructed transport system which is designed to transport people or objects over land, but not water or air. NMDCO_relaxed.owl ENVO:03501112 biolink:NamedThing public bus A bus which is part of public infrastructure. NMDCO_relaxed.owl ENVO:03501113 biolink:NamedThing public ferry A ferry which is owned by a government or other form of public representation. NMDCO_relaxed.owl ENVO:03501115 biolink:NamedThing public subway train A subway train which is owned by a government or other form of public representation. NMDCO_relaxed.owl ENVO:03501116 biolink:NamedThing rapid transit system A public transit system which is owned by a government or other form of public representation. NMDCO_relaxed.owl ENVO:03501118 biolink:NamedThing public transport hub A transport hub which is part of public infrastructure. NMDCO_relaxed.owl ENVO:03501119 biolink:NamedThing agricultural experimental station A research station in which food production and/or agribusinness research is performed. NMDCO_relaxed.owl ENVO:03501131 biolink:NamedThing university building An institutional building in which university services are performed. NMDCO_relaxed.owl ENVO:03501132 biolink:NamedThing fire station An institutional building in which firefighting apparati are stored, and which may include staff living spaces. NMDCO_relaxed.owl ENVO:03501133 biolink:NamedThing homeless shelter An institutional building which temporarily houses homeless people. NMDCO_relaxed.owl ENVO:03501200 biolink:NamedThing police station An institutional building which is used to provide policing services. NMDCO_relaxed.owl ENVO:03501138 biolink:NamedThing anaesthetics unit facility A hospital unit facility which is used for anaesthetic service provision. NMDCO_relaxed.owl ENVO:03501139 biolink:NamedThing breast screening unit facility A hospital unit facility which is used for breast cancer screening. NMDCO_relaxed.owl ENVO:03501140 biolink:NamedThing chaplaincy unit facility A hospital unit facility which is used to provide nondemoninational religious services. NMDCO_relaxed.owl ENVO:03501141 biolink:NamedThing coronary care unit facility A hospital unit facility which is used to provide cardiac patient care. NMDCO_relaxed.owl ENVO:03501142 biolink:NamedThing diagnostic imaging unit facility A hospital unit facility which is used to provide diagnostic imaging services. NMDCO_relaxed.owl ENVO:03501143 biolink:NamedThing discharge unit facility A hospital unit facility which houses patients ready to leave the hospital facility. NMDCO_relaxed.owl ENVO:03501144 biolink:NamedThing emergency unit facility A hospital unit facility which is used to provide emergency medicine services. NMDCO_relaxed.owl ENVO:03501146 biolink:NamedThing gastroenterology unit facility A hospital unit facility which is used to provide gastroenterology medical services. NMDCO_relaxed.owl ENVO:03501147 biolink:NamedThing general surgery unit facility A hospital unit facility which is used to provide surgical services. NMDCO_relaxed.owl ENVO:03501148 biolink:NamedThing geriatric care unit facility A hospital unit facility which is used to provide geriatric medical services. NMDCO_relaxed.owl ENVO:03501150 biolink:NamedThing gynaecology unit facility A hospital unit facility which is used to provide gynaecologic medical services. NMDCO_relaxed.owl ENVO:03501151 biolink:NamedThing haematology unit facility A hospital unit facility which is used to provide haematological medical services. NMDCO_relaxed.owl ENVO:03501152 biolink:NamedThing intensive care unit facility A hospital unit facility which is used to provide intensive medical care. NMDCO_relaxed.owl ENVO:03501156 biolink:NamedThing maternity unit facility A hospital unit facility which is used to provide materinity care. NMDCO_relaxed.owl ENVO:03501158 biolink:NamedThing micobiology unit facility A hospital unit facility which is used to provide medical microbiology services. NMDCO_relaxed.owl ENVO:03501159 biolink:NamedThing neonatal unit facility A hospital unit facility which is used to provide neonatal medical services. NMDCO_relaxed.owl ENVO:03501161 biolink:NamedThing nephrology unit facility A hospital unit facility which is used to provide nephrological medical services. NMDCO_relaxed.owl ENVO:03501162 biolink:NamedThing neurology unit facility A hospital unit facility which is used to provide neurological medical services. NMDCO_relaxed.owl ENVO:03501163 biolink:NamedThing nutrition and dietetics unit facility A hospital unit facility which is used to provide nutrition and dietetics services. NMDCO_relaxed.owl ENVO:03501164 biolink:NamedThing occupational therapy unit facility A hospital unit facility which is used to provide occupational therapy. NMDCO_relaxed.owl ENVO:03501165 biolink:NamedThing oncology unit facility A hospital unit facility which provides treatment for cancer. NMDCO_relaxed.owl ENVO:03501166 biolink:NamedThing ophthalmology unit facility A hospital unit facility which is used to provide ophthalmological services. NMDCO_relaxed.owl ENVO:03501167 biolink:NamedThing orthopaedics unit facility A hospital unit facility in which orthopaedic medicine is performed. NMDCO_relaxed.owl ENVO:03501168 biolink:NamedThing pain management unit facility A hospital unit facility which is used to provide pain management. NMDCO_relaxed.owl ENVO:03501169 biolink:NamedThing pediatric unit facility A hospital unit facility which is used to provide pediatric services. NMDCO_relaxed.owl ENVO:03501171 biolink:NamedThing pharmacy unit facility A hospital unit facility which is used to provide pharmacy services. NMDCO_relaxed.owl ENVO:03501172 biolink:NamedThing physiotherapy unit facility A hospital unit facility which is used to provide physiotherapy. NMDCO_relaxed.owl ENVO:03501173 biolink:NamedThing post-anesthesia care unit facility A hospital unit facility which is used to provide care for patients recovering from anesthesia. NMDCO_relaxed.owl ENVO:03501174 biolink:NamedThing high dependency unit facility A hospital unit facility which is used to provide high dependency care. NMDCO_relaxed.owl ENVO:03501175 biolink:NamedThing psychiatric unit facility A hospital unit facility which is used to provide psychiatric medicine. NMDCO_relaxed.owl ENVO:03501177 biolink:NamedThing radiotherapy unit facility A hospital unit facility which is used to provide radiation therapy. NMDCO_relaxed.owl ENVO:03501178 biolink:NamedThing rheumatology unit facility A hospital unit facility which is used to provide rheumatic medical services. NMDCO_relaxed.owl ENVO:03501179 biolink:NamedThing urology unit facility A hospital unit facility which is used to provide urological medicine services. NMDCO_relaxed.owl ENVO:03501149 biolink:NamedThing geriatric intensive care unit facility An intensive care unit facility which is used to provide care of critically ill elderly patients. NMDCO_relaxed.owl ENVO:03501153 biolink:NamedThing surgical intensive care unit facility An intensive care unit facility which is used to provide surgical services for critically ill patients. NMDCO_relaxed.owl ENVO:03501154 biolink:NamedThing traumatic intensive care unit facility An intensive care unit facility which is used to provide medical care for trauma patients. NMDCO_relaxed.owl ENVO:03501160 biolink:NamedThing neonatal intensive care unit facility A hospital unit facility which is used to provide intensive neonatal medical care. NMDCO_relaxed.owl ENVO:03501170 biolink:NamedThing pediatric intensive care unit facility A hospital unit facility which is used to provide pediatric intensive care. NMDCO_relaxed.owl ENVO:03501176 biolink:NamedThing psychiatric intensive care unit facility A hospital unit facility which is used to provide intensive psychiatric care. NMDCO_relaxed.owl ENVO:03501157 biolink:NamedThing mobile intensive care ambulance An ambulance which is equiped to enable intensive care service provision. NMDCO_relaxed.owl ENVO:03501181 biolink:NamedThing tertiary referral hospital A hospital which is used to provide tertiary care. NMDCO_relaxed.owl ENVO:03501182 biolink:NamedThing clinic A facility which is used to provide treatment, remedial work, and/or instruction. NMDCO_relaxed.owl ENVO:03501184 biolink:NamedThing chiropractic clinic A medical clinic which is used to provide chiropractic services. NMDCO_relaxed.owl ENVO:03501185 biolink:NamedThing dental clinic A medical clinic which is used to provide medical services focused on maintaining and improving the oral health of clients. NMDCO_relaxed.owl ENVO:03501186 biolink:NamedThing family practice clinic A medical clinic which is used to provide family medicine services. NMDCO_relaxed.owl ENVO:03501187 biolink:NamedThing massage therapy clinic A medical clinic which is used to provide massage therapy services. NMDCO_relaxed.owl ENVO:03501188 biolink:NamedThing ophthalmology clinic A medical clinic which is used to provide ophthalmology services. NMDCO_relaxed.owl ENVO:03501189 biolink:NamedThing optometry clinic A medical clinic which is used to provide optometry services. NMDCO_relaxed.owl ENVO:03501190 biolink:NamedThing pain clinic A medical clinic which is used to provide pain management services. NMDCO_relaxed.owl ENVO:03501191 biolink:NamedThing physiotherapy clinic A medical clinic which is used to provide physical therapy services. NMDCO_relaxed.owl ENVO:03501192 biolink:NamedThing walk-in clinic A medical clinic which is used to provide services to walk-in patients. NMDCO_relaxed.owl ENVO:03501194 biolink:NamedThing long-term care facility A residential building which is used to provides long-term care for residents. NMDCO_relaxed.owl ENVO:03501274 biolink:NamedThing bunkhouse A residential building containing bunks or beds which are often not separated by walls. NMDCO_relaxed.owl ENVO:03501279 biolink:NamedThing tenement A residential building shared by multiple dwellings, typically with flats or apartments on each floor and with shared entrance stairway access. NMDCO_relaxed.owl ENVO:03501195 biolink:NamedThing assisted living facility A long-term care facility which is used to provide care for people with disabilities or for adults who cannot or who choose not to live independently. NMDCO_relaxed.owl ENVO:03501196 biolink:NamedThing group home facility A long-term care facility which is used to provide care for people with complex health needs, and which typically has at least one caregiver in attendance twenty four hours a day. NMDCO_relaxed.owl ENVO:03501198 biolink:NamedThing wet market A market which is used for the sale and purchase of perishable goods. NMDCO_relaxed.owl ENVO:03501199 biolink:NamedThing dry market A market which is used for the sale and purchase of durable goods. NMDCO_relaxed.owl ENVO:03501203 biolink:NamedThing polling booth A booth which enables a voter to vote confidentially. NMDCO_relaxed.owl ENVO:03501207 biolink:NamedThing shopping mall A shopping center in which a large indoor pedestrian promenade provides access to stores and other facilities. NMDCO_relaxed.owl ENVO:03501209 biolink:NamedThing bedrail A poll which is attached to the head, foot, or side of a bed frame. NMDCO_relaxed.owl ENVO:03501212 biolink:NamedThing handrail A pole which provides stability or support when grasped by the hand. NMDCO_relaxed.owl ENVO:03501213 biolink:NamedThing light switch A switch which turns a light on or off. NMDCO_relaxed.owl ENVO:03501215 biolink:NamedThing nurse call button A switch which allows patients in health care settings to alert a nurse or other health care staff member. NMDCO_relaxed.owl ENVO:03501216 biolink:NamedThing stainless steel Steel which is composed primarily of a corrosion resistant alloy of iron and chromium. NMDCO_relaxed.owl ENVO:03501234 biolink:NamedThing town hall An office building which is the chief administrative building of a city, town, or other municipality. NMDCO_relaxed.owl ENVO:03501244 biolink:NamedThing Bailey bridge A bridge which is a truss bridge, pre-fabricated, and portable. NMDCO_relaxed.owl ENVO:03501245 biolink:NamedThing drawbridge A bridge which is hinged and can be raised. NMDCO_relaxed.owl ENVO:03501246 biolink:NamedThing footbridge A bridge designed solely for pedestrians. NMDCO_relaxed.owl ENVO:03501247 biolink:NamedThing humpback bridge A bridge which arches in the center, and has a span which is higher than the ramps on either side, forming a hump-like arrangement. NMDCO_relaxed.owl ENVO:03501248 biolink:NamedThing overpass A bridge which is used for transportaiton, and which crosses over another road or railway. NMDCO_relaxed.owl ENVO:03501249 biolink:NamedThing suspension bridge A bridge which has its deck hung on vertical suspenders via suspension cables. NMDCO_relaxed.owl ENVO:03501250 biolink:NamedThing swing bridge A bridge which is movable and has a vertical locating pin as its primary structural support, and a support ring about which it can pivot horizontally. NMDCO_relaxed.owl ENVO:03501252 biolink:NamedThing chicken manure Poultry manure made of chicken feces. NMDCO_relaxed.owl ENVO:03501264 biolink:NamedThing squeegee A tool with a flat, smooth rubber blade, used to remove or control the flow of liquid on a flat surface. NMDCO_relaxed.owl ENVO:03501267 biolink:NamedThing peeler A hand tool used to remove the outer layer of vegetables and fruit, consisting of a handle attached to a metal blade with a slot with a sharp edge. NMDCO_relaxed.owl ENVO:03501289 biolink:NamedThing wrench A hand tool for making rotational adjustments. NMDCO_relaxed.owl ENVO:03501327 biolink:NamedThing utensil A hand tool for domestic use, especially in the kitchen. NMDCO_relaxed.owl ENVO:03501265 biolink:NamedThing public toilet An indoor toilet that is available for public use. NMDCO_relaxed.owl ENVO:03501285 biolink:NamedThing clothes dryer A dryer that is used to remove moisture from textiles. NMDCO_relaxed.owl ENVO:03501286 biolink:NamedThing calf shed A cow shed for baby cows/bulls. NMDCO_relaxed.owl ENVO:03501294 biolink:NamedThing preprocessing plant A factory where raw or preprocessed materials are transformed into finished parts or products. NMDCO_relaxed.owl ENVO:03501295 biolink:NamedThing processing plant A factory where raw materials are treated or prepared for final processing. NMDCO_relaxed.owl ENVO:03501296 biolink:NamedThing cheese processing plant A factory for processing, packaging, labelling, handling, and storing cheese. NMDCO_relaxed.owl ENVO:03501297 biolink:NamedThing meat processing plant A processing plant for slaughtering, processing, packaging, labelling, handling, and storing of food animal carcasses, parts of carcasses, and meat products. NMDCO_relaxed.owl ENVO:03501299 biolink:NamedThing charcuterie shop A delicatessen which prepares and sells preserved meat products. NMDCO_relaxed.owl ENVO:03501302 biolink:NamedThing cork Plant matter consisting of an impermeable buoyant material, the phellem layer of bark tissue. NMDCO_relaxed.owl ENVO:03501305 biolink:NamedThing pliofilm Synthetic plastic which is composed of a glossy, moistureproof membrane made of rubber hydrochloride. NMDCO_relaxed.owl ENVO:06105112 biolink:NamedThing synthetic plastic A plastic which is composed primarily of polymers produced by a manufacturing process. NMDCO_relaxed.owl ENVO:03501312 biolink:NamedThing environmental monitoring program area An environmental monitoring area which is under observation by humans belonging to organisations with a legislative mandate to monitor the area. NMDCO_relaxed.owl ENVO:03501313 biolink:NamedThing food production environmental monitoring zone An environmental monitoring program area within a food production facility. NMDCO_relaxed.owl ENVO:03501319 biolink:NamedThing food prossessing non-production area A hygienic food production area which is not an immediate part of a food manufacturing process area. NMDCO_relaxed.owl ENVO:03501320 biolink:NamedThing food production low-risk contamination area A hygienic food production area containing products having a low risk of contamination. NMDCO_relaxed.owl ENVO:03501321 biolink:NamedThing food production medium-risk contamination area A hygienic food production area in which general food processing occurs. NMDCO_relaxed.owl ENVO:03501322 biolink:NamedThing food production high-risk contamination area A hygienic food production area containing food products that are not subjected to subsequent microbial decontamination, and where there is a risk of pathogen or microbial spoilage growth. NMDCO_relaxed.owl ENVO:03501328 biolink:NamedThing fork An eating utensil with spikes used to put solid food into the mouth, or to hold food down while cutting. NMDCO_relaxed.owl ENVO:03501353 biolink:NamedThing eating utensil A utensil used for consuming food. NMDCO_relaxed.owl ENVO:03501329 biolink:NamedThing spoon An eating utensil with a scooped end and a long handle. NMDCO_relaxed.owl ENVO:03501346 biolink:NamedThing chopstick An eating utensil which is a thin stick used in equal length pairs to manipulate food and bring it into a mouth. NMDCO_relaxed.owl ENVO:03501330 biolink:NamedThing cup A utensil which is a hand-sized container with an open top. NMDCO_relaxed.owl ENVO:03501338 biolink:NamedThing human nursery A child care facility in which child care services are provided to young children and babies. NMDCO_relaxed.owl ENVO:03501344 biolink:NamedThing insecure housing A human dwelling which may be unsustainable over the long term for an inhabitant because of financial, livability, overcrowding or other factors. NMDCO_relaxed.owl ENVO:03501345 biolink:NamedThing temporary residence A human dwelling which is provided to one or more persons on a short-term basis. NMDCO_relaxed.owl ENVO:03501349 biolink:NamedThing airplane An aircraft which 1) has fixed wings and 2) is propelled by a thrust from a jet engine, propeller, or rocket engine. NMDCO_relaxed.owl ENVO:03501362 biolink:NamedThing belt conveyor system A conveyor system which uses conveyer belt machines to transport material. NMDCO_relaxed.owl ENVO:03501365 biolink:NamedThing bucket conveyor A conveyor system which is used to transport granular material vertically in open containers. NMDCO_relaxed.owl ENVO:03501366 biolink:NamedThing screw conveyor A conveyor system which consists of a helicoid flight mounted in a tube or shaft. NMDCO_relaxed.owl ENVO:03501367 biolink:NamedThing pneumatic conveyor A conveyor system which transports dry bulk particulate or granular material through a pipeline by a stream of gas. NMDCO_relaxed.owl ENVO:03501364 biolink:NamedThing packaging equipment A manufacturing equipment piece which is used to package material. NMDCO_relaxed.owl ENVO:03510001 biolink:NamedThing brake fluid A hydraulic fluid which is 1) used in hydraulic brake and hydraulic clutch applications in vehicles to amplify braking force and 2) composed primarily of ethylene glycol, polyglycols, silicone fluids, and isobutyl alcohol. NMDCO_relaxed.owl ENVO:03510011 biolink:NamedThing leather dye Pigments carried by solvents or water which are applied to leather to be absorbed into the pores of the leather to deposit coloration. NMDCO_relaxed.owl ENVO:03510012 biolink:NamedThing paper dye Dyes used for the coloration or brightening of paper. NMDCO_relaxed.owl ENVO:03510013 biolink:NamedThing textile dye Dyes utilized for coloring textiles such as wool or cellulose fibers. NMDCO_relaxed.owl ENVO:03510019 biolink:NamedThing cleaning agent A liquid, powder, spray, or granule used to remove dirt, including dust, stains, bad smells, and clutter on surfaces. NMDCO_relaxed.owl ENVO:03510024 biolink:NamedThing lacquer A category of hard and potentially shiny (clear or colored) finishes which can be applied to materials including wood or metal. NMDCO_relaxed.owl ENVO:03510025 biolink:NamedThing paint thinner A solvent that can dissolve paint and reduce viscosity of paint or "thin" it. NMDCO_relaxed.owl ENVO:03510040 biolink:NamedThing stain A preparation with dye or pigment used to deposit coloration to a substrate. NMDCO_relaxed.owl ENVO:2000001 biolink:NamedThing creosote The portion of chemical products obtained by the distillation of a tar that remains heavier than water, notably useful for its anti-septic and preservative properties NMDCO_relaxed.owl ENVO:03510020 biolink:NamedThing degreaser A cleaning agent which 1) contains organic solvents and 2) dissolves oils and fats for the removal of grease. NMDCO_relaxed.owl ENVO:03510022 biolink:NamedThing resin (gum) varnish A varnish containing a natural, plant- or insect-derived substance dissolved in a solvent, called spirit varnish or solvent varnish. NMDCO_relaxed.owl ENVO:03510026 biolink:NamedThing acrylic paint medium A liquid, gel, or paste that can be mixed into acrylic paint to alter paint consistency and properties. NMDCO_relaxed.owl ENVO:03510027 biolink:NamedThing enamel thinner A paint thinner specific for altering the viscosity of enamel paints. NMDCO_relaxed.owl ENVO:03510028 biolink:NamedThing oil paint thinner A solvent used to thin oil-based paints or clean up after their use. NMDCO_relaxed.owl ENVO:03510041 biolink:NamedThing wood stain A stain which has colorants dissolved and/or suspended in a vehicle or solvent, used to add color to wood. NMDCO_relaxed.owl ENVO:03520004 biolink:NamedThing cloud base A cloud part which is closest to the surface of the astronomical body local to the cloud. NMDCO_relaxed.owl ENVO:03520005 biolink:NamedThing cloud top A cloud part which is furthest from the surface of the astronomical body local to the cloud. NMDCO_relaxed.owl ENVO:03600003 biolink:NamedThing drinking water pipeline network A pipeline network which is used to transport drinking water to consumers. NMDCO_relaxed.owl ENVO:03600012 biolink:NamedThing oil pipeline network A pipeline network which is used to transport oil to consumers. NMDCO_relaxed.owl ENVO:03600030 biolink:NamedThing soil horizon A soil layer which is parallel to the soil surface and which has roughly homogenous physical, chemical and biological properties relative to the soil layers above or beneath it. NMDCO_relaxed.owl ENVO:03600018 biolink:NamedThing organic horizon A soil horizon which is composed primarily of organic matter. NMDCO_relaxed.owl ENVO:03600019 biolink:NamedThing sugarcane vinasse Vinasse which is produced during the rectification and distillation of ethanol from sugar cane. NMDCO_relaxed.owl ENVO:03600020 biolink:NamedThing tailings dam An earth-filled dam which is used for the storage of mining operations byproducts, after separating the ore from the gangue. NMDCO_relaxed.owl ENVO:03600031 biolink:NamedThing earth-filled dam An embankment dam which is primarily composed of compacted earth. NMDCO_relaxed.owl ENVO:03600033 biolink:NamedThing residential backyard A yard which consists of land immediately adjacent to the back of a residential building NMDCO_relaxed.owl ENVO:03600049 biolink:NamedThing smokeless tobacco Processed tobacco which has been treated for use by placing it between the gum and cheek or lip, chewed, or sniffed, but not smoked. NMDCO_relaxed.owl ENVO:03600050 biolink:NamedThing space station A spacecraft which is capable of supporting a human crew in orbit for an extended period of time. NMDCO_relaxed.owl ENVO:03600061 biolink:NamedThing shipwreck Anthropogenic litter which consists of an abandoned ship's remains. NMDCO_relaxed.owl ENVO:06105124 biolink:NamedThing coastal anthropogenic litter Anthropogenic litter which is present in a coastal environment. NMDCO_relaxed.owl ENVO:03600063 biolink:NamedThing tube well A water well in which a long, 100–200 millimetres-wide, stainless steel tube or pipe is bored into an underground aquifer to lift water using a pump. NMDCO_relaxed.owl ENVO:03600067 biolink:NamedThing neonatal intensive care unit An intensive care unit (ICU) specializing in the care of ill or premature newborn infants. NMDCO_relaxed.owl ENVO:03600090 biolink:NamedThing alcohol fermentation pit A fermentation pit which is constructed to facilitate the fermentation of alcoholic substances. NMDCO_relaxed.owl ENVO:03600096 biolink:NamedThing step pool A stream pool which is formed as a result of high-gradient, steep streams where water cascades over a rock or woody snag. NMDCO_relaxed.owl ENVO:03605000 biolink:NamedThing periphytic biofilm Biofilm consisting of a mixture of algae, cyanobacteria, microbes, and detritus. NMDCO_relaxed.owl ENVO:03605001 biolink:NamedThing epilithon Periphyton colonizing rock substrata NMDCO_relaxed.owl ENVO:03605002 biolink:NamedThing epipelon Periphyton colonizing silt substrata NMDCO_relaxed.owl ENVO:03605003 biolink:NamedThing epiphyton Periphyton colonizing surface of aquatic plants NMDCO_relaxed.owl ENVO:03605004 biolink:NamedThing epipsammon Periphyton colonizing sand substrata NMDCO_relaxed.owl ENVO:03605005 biolink:NamedThing epixylon Periphyton colonizing woody substrata NMDCO_relaxed.owl ENVO:04000002 biolink:NamedThing temperature of sea surface A water temperature which inheres in water close to the surface of an ocean or sea. NMDCO_relaxed.owl ENVO:09200014 biolink:NamedThing temperature of water The temperature of some water. NMDCO_relaxed.owl ENVO:04000009 biolink:NamedThing active permafrost layer A layer which is composed of ground that is 1) subject to annual thawing and freezing and 2) present in areas underlain by permafrost. NMDCO_relaxed.owl ENVO:04000011 biolink:NamedThing bare soil surface layer A soil surface which is exposed to the troposphere, with no appreciable cover from vegetation or other material. NMDCO_relaxed.owl ENVO:04000013 biolink:NamedThing particulate organic carbon Particulate organic matter which is composed primarily of carbon. NMDCO_relaxed.owl ENVO:04000014 biolink:NamedThing particulate organic nitrogen Particulate organic matter which is composed primarily of nitrogen. NMDCO_relaxed.owl ENVO:04000016 biolink:NamedThing biotic carbon sequestration A carbon sequestration process during which atmospheric carbon dioxide is captured and stored by biological processes. NMDCO_relaxed.owl ENVO:04000017 biolink:NamedThing geological carbon sequestration A carbon sequestration process during which carbon dioxide is stored in underground geological formations. NMDCO_relaxed.owl ENVO:04000018 biolink:NamedThing carbon sequestration by the ocean carbonate system A carbon sequestration process during which carbon dioxide is stored in the carbonate system of an ocean. NMDCO_relaxed.owl ENVO:06105012 biolink:NamedThing biota A collection of organisms which inhabits the same region, ecosystem, or time period. NMDCO_relaxed.owl PCO:0000000 biolink:NamedThing collection of organisms A material entity that consists of two or more organisms, viruses, or viroids. NMDCO_relaxed.owl PCO:0000018 biolink:NamedThing single-species collection of organisms A material entity that has as parts two or more organisms, viruses, or viroids of the same species and no members of any other species. NMDCO_relaxed.owl PCO:0000029 biolink:NamedThing multi-species collection of organisms A collection of organisms that consists of two or more organisms from at least two species. NMDCO_relaxed.owl ENVO:06105013 biolink:NamedThing marine biota A biota which inhabits a marine ecosystem. NMDCO_relaxed.owl ENVO:06105015 biolink:NamedThing biodegradation of plastic A biodegradation process during which plastic is broken down. NMDCO_relaxed.owl ENVO:06105016 biolink:NamedThing foamed plastic A plastic which has a matrix- or sponge-like structure with numerous, hollow internal spaces. NMDCO_relaxed.owl ENVO:06105111 biolink:NamedThing natural plastic Plastic which is composed primarily of polymers produced by processes whose agents do not include humans or their technologies. NMDCO_relaxed.owl ENVO:06105020 biolink:NamedThing ingestion A feeding behavior during which material is taken into the body of an organism. NMDCO_relaxed.owl GO:0042755 biolink:NamedThing eating behavior NMDCO_relaxed.owl ENVO:06105023 biolink:NamedThing biofouling A fouling process during which biological matter accumulates on a solid surface. NMDCO_relaxed.owl ENVO:06105026 biolink:NamedThing granule of plastic foam A piece of plastic foam which has a near-spherical or granular shape. NMDCO_relaxed.owl ENVO:06105028 biolink:NamedThing fragmentation due to weathering A fragmentation process which is caused by weathering. NMDCO_relaxed.owl ENVO:06105110 biolink:NamedThing manufactured plastisphere A plastisphere which is composed primarily of manufactured plastic. NMDCO_relaxed.owl ENVO:06105116 biolink:NamedThing discarded fishing gear Abandoned fishing gear which was intentionally left unmaintained and uncontrolled by its custodian. NMDCO_relaxed.owl ENVO:06105117 biolink:NamedThing abandoned fishing gear Fishing gear which is not under the control of or maintained by its custodian. NMDCO_relaxed.owl ENVO:06105118 biolink:NamedThing lost fishing gear Abandoned fishing gear which was unintentionally left unmaintained and uncontrolled by its custodian. NMDCO_relaxed.owl ENVO:06105121 biolink:NamedThing entanglement of organisms in marine debris An entanglement process during which organisms become entrapped in anthropogenic marine debris. NMDCO_relaxed.owl ENVO:06105126 biolink:NamedThing weathering of plastic Weathering during which plastic is worn or broken down. NMDCO_relaxed.owl ENVO:06105213 biolink:NamedThing photosynthetic photon flux A flux which inheres in photosynthetically active radiation. NMDCO_relaxed.owl PATO:0001030 biolink:NamedThing flux A physical quality that exists by virtue of the rate of flow of the bearer across a given surface. NMDCO_relaxed.owl ENVO:06105215 biolink:NamedThing rainy day count The number of days during which there is precipitation NMDCO_relaxed.owl PATO:0000070 biolink:NamedThing amount The number of entities of this type that are part of the whole organism. NMDCO_relaxed.owl ENVO:09000004 biolink:NamedThing amount of carbon atom in environmental material The amount of a carbon atom when measured in environmental material. NMDCO_relaxed.owl ENVO:09000005 biolink:NamedThing amount of carbon atom in soil The amount of a carbon atom when measured in soil. NMDCO_relaxed.owl ENVO:09000006 biolink:NamedThing amount of carbon atom in water The amount of a carbon atom when measured in water. NMDCO_relaxed.owl ENVO:09000013 biolink:NamedThing amount of nitrogen atom in environmental material The amount of a nitrogen atom when measured in environmental material. NMDCO_relaxed.owl ENVO:09000014 biolink:NamedThing amount of nitrogen atom in soil The amount of a nitrogen atom when measured in soil. NMDCO_relaxed.owl ENVO:09000015 biolink:NamedThing amount of nitrogen atom in water The amount of a nitrogen atom when measured in water. NMDCO_relaxed.owl PATO:0000467 biolink:NamedThing present A quality inhering in a bearer by virtue of the bearer's existence. NMDCO_relaxed.owl ENVO:06105231 biolink:NamedThing water infiltration into soil A water infiltration process during which water fills the pore space and interstices of soil. NMDCO_relaxed.owl ENVO:06105232 biolink:NamedThing soil albedo Albedo which inheres in soil. NMDCO_relaxed.owl PATO:0001295 biolink:NamedThing albedo A reflective quality restricted to a particular wavelength. NMDCO_relaxed.owl ENVO:06105233 biolink:NamedThing dry soil albedo Soil albedo which inheres in dry soil. NMDCO_relaxed.owl ENVO:06105234 biolink:NamedThing moist soil albedo Soil albedo which inheres in moist soil. NMDCO_relaxed.owl ENVO:06105237 biolink:NamedThing exchangeable potassium A potassium ion which is capable of ion exchange. NMDCO_relaxed.owl ENVO:06105239 biolink:NamedThing exchangeable calcium A calcium ion which is capable of ion exchange. NMDCO_relaxed.owl ENVO:06105242 biolink:NamedThing basic cation exchange capacity A cation exchange capacity which inheres in an environmental material by virtue of the material's ability to adsorb basic exchangeable cations. NMDCO_relaxed.owl ENVO:06105271 biolink:NamedThing soil texture Texture which inheres in soil. NMDCO_relaxed.owl PATO:0000150 biolink:NamedThing texture A morphologic quality inhering in a bearer by virtue of the bearer's relative size, organization and distribution of its surface elements or the representation or invention of the appearance of its surface; visual and tactile surface characteristics. NMDCO_relaxed.owl PATO:0000701 biolink:NamedThing smooth A texture quality inhering in a bearer by virtue of the bearer's processing a surface free of roughness or irregularities. NMDCO_relaxed.owl PATO:0002255 biolink:NamedThing grooved Texture quality inhering in a bearer by virtue of the bearer's being marked with one or more channels. NMDCO_relaxed.owl ENVO:06105276 biolink:NamedThing sandy clay loam Clay loam which has a high proportion of sand in its composition. NMDCO_relaxed.owl ENVO:06105278 biolink:NamedThing silty clay loam Clay loam which has a high proportion of silt in its composition. NMDCO_relaxed.owl ENVO:06105300 biolink:NamedThing wastewater treatment process A recycling process during which wastewater is treated NMDCO_relaxed.owl ENVO:06105301 biolink:NamedThing desalination process A recycling process during which the dissolved mineral salts in water are removed NMDCO_relaxed.owl ENVO:06105302 biolink:NamedThing field capacity A concentration of liquid water in soil arrived at after water which is not retained by the soil has drained away. NMDCO_relaxed.owl ENVO:06105303 biolink:NamedThing permanent wilting point A concentration of liquid water in soil at or below which a plant will wilt and no longer recover its turgidity when placed in a water saturated atmosphere. NMDCO_relaxed.owl ENVO:06105304 biolink:NamedThing water-holding capacity of soil Water-holding capacity which inheres in some soil. NMDCO_relaxed.owl ENVO:09000001 biolink:NamedThing solubility of carbon atom in environmental material The solubility of a carbon atom when measured in environmental material. NMDCO_relaxed.owl PATO:0001536 biolink:NamedThing solubility A molecular quality that inheres in a molecular entity by virtue of the bearer's disposition to dissolve in a liquid. NMDCO_relaxed.owl ENVO:09000002 biolink:NamedThing solubility of carbon atom in soil The solubility of a carbon atom when measured in soil. NMDCO_relaxed.owl ENVO:09000003 biolink:NamedThing solubility of carbon atom in water The solubility of a carbon atom when measured in water. NMDCO_relaxed.owl ENVO:09000010 biolink:NamedThing solubility of nitrogen atom in environmental material The solubility of a nitrogen atom when measured in environmental material. NMDCO_relaxed.owl ENVO:09000011 biolink:NamedThing solubility of nitrogen atom in soil The solubility of a nitrogen atom when measured in soil. NMDCO_relaxed.owl ENVO:09000012 biolink:NamedThing solubility of nitrogen atom in water The solubility of a nitrogen atom when measured in water. NMDCO_relaxed.owl PATO:0001986 biolink:NamedThing dissolved A quality inhering in a bearer by virtue of the bearer's passing into solution. NMDCO_relaxed.owl ENVO:09100001 biolink:NamedThing dissolved carbon atom in environmental material The carbon atom in a dissolved state when measured in environmental material. NMDCO_relaxed.owl ENVO:09100004 biolink:NamedThing dissolved nitrogen atom in environmental material The nitrogen atom in a dissolved state when measured in environmental material. NMDCO_relaxed.owl ENVO:09000028 biolink:NamedThing evaporation of liquid water in soil The evaporation of a liquid water when measured in soil. NMDCO_relaxed.owl ENVO:09100002 biolink:NamedThing dissolved carbon atom in soil The carbon atom in a dissolved state when measured in soil. NMDCO_relaxed.owl ENVO:09100003 biolink:NamedThing dissolved carbon atom in water The carbon atom in a dissolved state when measured in water. NMDCO_relaxed.owl ENVO:09100005 biolink:NamedThing dissolved nitrogen atom in soil The nitrogen atom in a dissolved state when measured in soil. NMDCO_relaxed.owl ENVO:09100006 biolink:NamedThing dissolved nitrogen atom in water The nitrogen atom in a dissolved state when measured in water. NMDCO_relaxed.owl ENVO:09200000 biolink:NamedThing temperature of environmental material The temperature of some environmental material. NMDCO_relaxed.owl ENVO:09200012 biolink:NamedThing temperature of soil The temperature of some soil. NMDCO_relaxed.owl PATO:0001305 biolink:NamedThing increased temperature A temperature which is relatively high. NMDCO_relaxed.owl PATO:0001306 biolink:NamedThing decreased temperature A temperature which is relatively low. NMDCO_relaxed.owl PATO:0001985 biolink:NamedThing frozen A quality inhering in a bearer by virtue of the bearer's being kept below its freezing point. NMDCO_relaxed.owl PATO:0002302 biolink:NamedThing decreased process quality A quality of a process that has a value that is decreased compared to normal or average. NMDCO_relaxed.owl PATO:0002304 biolink:NamedThing increased process quality A quality of a process that has a value that is increased compared to normal or average. NMDCO_relaxed.owl ENVO:09200003 biolink:NamedThing atmospheric wind intensity The intensity of a atmospheric wind. NMDCO_relaxed.owl PATO:0000049 biolink:NamedThing intensity A quality inhering in a bearer by virtue of the bearer's possessing or displaying a distinctive feature in type or degree or effect or force. NMDCO_relaxed.owl ENVO:09200004 biolink:NamedThing porosity of soil The porosity of some soil. NMDCO_relaxed.owl ENVO:09200009 biolink:NamedThing structure of soil The structure of some soil. NMDCO_relaxed.owl ENVO:09200008 biolink:NamedThing composition of soil The composition of some soil. NMDCO_relaxed.owl PATO:0000973 biolink:NamedThing porosity A structure quality inhering in a bearer by virtue of the bearer's disposition to admit the passage of gas or liquid through pores or interstices. NMDCO_relaxed.owl ENVO:09200034 biolink:NamedThing porosity of snow The porosity of some snow. NMDCO_relaxed.owl ENVO:09200035 biolink:NamedThing porosity of water ice The porosity of some water ice. NMDCO_relaxed.owl PATO:0000984 biolink:NamedThing porous A porosity quality inhering in a bearer by virtue of the bearer's being capable of admitting the passage of gas or liquid through pores or interstices. NMDCO_relaxed.owl PATO:0000985 biolink:NamedThing non-porous A porosity quality inhering in a bearer by virtue of the bearer's being incapable of admitting the passage of gas or liquid through pores or interstices. NMDCO_relaxed.owl ENVO:09200036 biolink:NamedThing mass density of snow The mass density of some snow. NMDCO_relaxed.owl PATO:0001164 biolink:NamedThing dense A physical quality which inheres in a bearer by virtue of the bearer's exhibiting density. NMDCO_relaxed.owl PATO:0002141 biolink:NamedThing irregular density A density quality which lacks pattern. NMDCO_relaxed.owl PATO:0000025 biolink:NamedThing composition A single physical entity inhering in an bearer by virtue of the bearer's quantities or relative ratios of subparts. NMDCO_relaxed.owl ENVO:09200017 biolink:NamedThing composition of water The composition of some water. NMDCO_relaxed.owl PATO:0001447 biolink:NamedThing calcified A composition quality inhering in an bearer by virtue of the bearer's being encrusted or impregnated with calcium carbonate (CHEBI:3311). NMDCO_relaxed.owl PATO:0001759 biolink:NamedThing granular A composition quality inhering in a bearer by virtue of the bearer's containing granules. NMDCO_relaxed.owl PATO:0002462 biolink:NamedThing collagenous A composition quality inhering in an bearer by virtue of the bearer's consisting of collagen. NMDCO_relaxed.owl PATO:0000141 biolink:NamedThing structure A morphology quality inhering in a bearer by virtue of the bearer's relative position, shape, arrangements and connectivity of an organism's various parts; the pattern underlying its form. NMDCO_relaxed.owl PATO:0000642 biolink:NamedThing fused with A structural quality inhering in a bearer by virtue of the bearer's being merged with another entity. NMDCO_relaxed.owl PATO:0000970 biolink:NamedThing permeability A structural quality inhering in a bearer by virtue of the bearer's disposition to being permeated or pervaded by a gas or liquid (as by osmosis or diffusion). NMDCO_relaxed.owl PATO:0001411 biolink:NamedThing structured A structural quality inhering in a bearer by virtue of the bearer's having distinct structure. NMDCO_relaxed.owl PATO:0001412 biolink:NamedThing unstructured A structural quality inhering in a bearer by virtue of the bearer's lacking distinct structure. NMDCO_relaxed.owl PATO:0001435 biolink:NamedThing attachment quality A structural quality inhering in a bearer by virtue of the bearer's having connection or association with another entity. NMDCO_relaxed.owl PATO:0001442 biolink:NamedThing wholeness A structural quality inhering in a bearer by virtue of whether the bearer includes all its components. NMDCO_relaxed.owl PATO:0001485 biolink:NamedThing condensed A structural quality inhering in a bearer by virtue of the bearer's being thicker or more closely packed together; pressed tightly together. NMDCO_relaxed.owl PATO:0001846 biolink:NamedThing tangled A structural quality inhering in a bearer by virtue of the bearer's being entwined and difficult to unravel. NMDCO_relaxed.owl PATO:0002014 biolink:NamedThing structure, cavities A structural quality that inheres in a bearer by virtue of the bearer's containing hollow areas. NMDCO_relaxed.owl PATO:0002064 biolink:NamedThing fenestrated A structure quality inhering in a bearer by virtue of the bearer's delimited by a surface with holes. NMDCO_relaxed.owl PATO:0002103 biolink:NamedThing infiltrative A structural quality inhering in a bearer by virtue of the bearer's penetrating or permeating another substance or area. NMDCO_relaxed.owl PATO:0002269 biolink:NamedThing accumulation A structural quality of the collection or massing of one physical object within another physical object. NMDCO_relaxed.owl PATO:0002292 biolink:NamedThing transient A structural quality inhering in a bearer by virtue of the bearer's underlying structure being capable of change. NMDCO_relaxed.owl PATO:0002422 biolink:NamedThing acinar Pertaining to the individual parts making up an aggregate fruit like a many-lobed "berry," such as a raspberry. NMDCO_relaxed.owl PATO:0002453 biolink:NamedThing eroding A structural quality inhering in a bearer by virtue of the bearer bring gradually worn away. NMDCO_relaxed.owl PATO:0010001 biolink:NamedThing disconnected A structural quality inhering in the bearer by virtue of the bearer consisting of multiple structures lacking any physical connection to each other. NMDCO_relaxed.owl PATO:0015006 biolink:NamedThing polymeric A quality inhering in a structure by virtue of it consisting of many of repeated, similar or identical subunits, arranged in some orderly array. NMDCO_relaxed.owl PATO:0015008 biolink:NamedThing distensibility A quality inhering in a bearer by virtue of the extent to which the bearer is capable of being stretched or swollen. NMDCO_relaxed.owl ENVO:09200010 biolink:NamedThing acidity of soil The acidity of some soil. NMDCO_relaxed.owl ENVO:3100030 biolink:NamedThing acidity of water The acidity of some water. NMDCO_relaxed.owl PATO:0001428 biolink:NamedThing medium acidity A concentration quality inhering in a medium by virtue of the bearer's tendency to hydronate a specific reference base. NMDCO_relaxed.owl PATO:0001844 biolink:NamedThing increased acidity An acidity which is relatively high. NMDCO_relaxed.owl ENVO:09200011 biolink:NamedThing pressure of air The pressure of some air. NMDCO_relaxed.owl ENVO:09200033 biolink:NamedThing pressure of atmospheric water vapour The pressure of some atmospheric water vapour. NMDCO_relaxed.owl ENVO:3100033 biolink:NamedThing pressure of water The pressure of some water. NMDCO_relaxed.owl PATO:0001575 biolink:NamedThing decreased pressure A pressure which is relatively low. NMDCO_relaxed.owl PATO:0001576 biolink:NamedThing increased pressure A pressure which is relatively high. NMDCO_relaxed.owl PATO:0045044 biolink:NamedThing normal pressure A pressure which is relatively normal or average NMDCO_relaxed.owl ENVO:09200013 biolink:NamedThing wetness of soil The wetness of some soil. NMDCO_relaxed.owl PATO:0001823 biolink:NamedThing wet A wetness quality inhering in a bearer by virtue of the bearer's being covered by a liquid. NMDCO_relaxed.owl PATO:0001824 biolink:NamedThing dry A wetness quality inhering in a bearer by virtue of the bearer's not being covered by a liquid. NMDCO_relaxed.owl ENVO:09200015 biolink:NamedThing humidity of soil The humidity of some soil. NMDCO_relaxed.owl PATO:0015009 biolink:NamedThing humidity A quality inhering in air by virtue of the partial pressure exerted by the bearer's water vapour content. NMDCO_relaxed.owl PATO:0015010 biolink:NamedThing increased humidity An increase in humidity. NMDCO_relaxed.owl PATO:0015011 biolink:NamedThing decreased humidity An decrease in humidity. NMDCO_relaxed.owl ENVO:09200016 biolink:NamedThing conductivity of soil The conductivity of some soil. NMDCO_relaxed.owl PATO:0001757 biolink:NamedThing electrical conductivity A conductivity quality inhering in a bearer by virtue of the bearer's ability to convey electricity. NMDCO_relaxed.owl ENVO:09200018 biolink:NamedThing conductivity of water The conductivity of some water. NMDCO_relaxed.owl ENVO:09200021 biolink:NamedThing color of soil The color of some soil. NMDCO_relaxed.owl PATO:0000014 biolink:NamedThing color A composite chromatic quality composed of hue, saturation and intensity parts. NMDCO_relaxed.owl PATO:0000318 biolink:NamedThing blue A color hue with low wavelength of that portion of the visible spectrum lying between green and indigo, evoked in the human observer by radiant energy with wavelengths of approximately 420 to 490 nanometers. NMDCO_relaxed.owl PATO:0000323 biolink:NamedThing white An achromatic color of maximum brightness; the color of objects that reflect nearly all light of all visible wavelengths. NMDCO_relaxed.owl PATO:0000952 biolink:NamedThing brown A color consisting of dark orange, red, of very low intensity. NMDCO_relaxed.owl ENVO:09200031 biolink:NamedThing amplitude of temperature of air The amplitude of some temperature of air. NMDCO_relaxed.owl ENVO:1000751 biolink:NamedThing barrier island An island formed by the accumulation of sand deposited by sea currents on a continental shelves NMDCO_relaxed.owl ENVO:2000002 biolink:NamedThing industrial wastewate treatment plant A wastewater treatment plant that treates industrial wastewater. Industrial wastewater treatment covers the mechanisms and processes used to treat waters that have been contaminated in some way by anthropogenic industrial or commercial activities prior to its release into the environment or its re-use. NMDCO_relaxed.owl ENVO:2000003 biolink:NamedThing agricultural wastewater treatment plant A wastewater treatment plant that treats agriculatural wastewater. Agricultural wastewater treatment relates to the treatment of wastewaters produced in the course of agricultural activities. Agriculture is a highly intensified industry in many parts of the world, producing a range of wastewaters requiring a variety of treatment technologies and management practices. NMDCO_relaxed.owl ENVO:2000007 biolink:NamedThing biochar charcoal that is used as a soil amendment. NMDCO_relaxed.owl ENVO:2000008 biolink:NamedThing lignite A soft, brown, combustible, sedimentary rock formed from naturally compressed peat. NMDCO_relaxed.owl ENVO:2000009 biolink:NamedThing sub-bitumous coal NMDCO_relaxed.owl ENVO:2000010 biolink:NamedThing bitumous coal a relatively soft coal containing a tarlike substance called bitumen or asphalt. It is of higher quality than lignite coal but of poorer quality than anthracite. It is an organic sedimentary rock formed by diagenetic and sub metamorphic compression of peat bog material. NMDCO_relaxed.owl ENVO:2000011 biolink:NamedThing anthracite A hard, compact variety of coal that has a submetallic luster. It has the highest carbon content, the fewest impurities, and the highest energy density of all types of coal and is the highest ranking of coal. NMDCO_relaxed.owl ENVO:2000044 biolink:NamedThing coke Coal heated in the absence of air. NMDCO_relaxed.owl ENVO:2000013 biolink:NamedThing generation of energy from coal NMDCO_relaxed.owl ENVO:2000014 biolink:NamedThing generation of energy from oil NMDCO_relaxed.owl ENVO:2000020 biolink:NamedThing electric energy potential energy due to or stored in electric fields. NMDCO_relaxed.owl ENVO:2000021 biolink:NamedThing magnetic energy potential energy due to or stored in magnetic fields. NMDCO_relaxed.owl ENVO:2000022 biolink:NamedThing gravitational energy potential energy due to or stored in gravitational fields. NMDCO_relaxed.owl ENVO:2000023 biolink:NamedThing chemical energy Potential energy which is stored in chemical bonds and realised through reactions which break them.. NMDCO_relaxed.owl ENVO:2000024 biolink:NamedThing ionization energy potential energy that binds an electron to its atom or molecule. NMDCO_relaxed.owl ENVO:2000025 biolink:NamedThing nuclear energy potential energy that binds nucleons to form the atomic nucleus (and nuclear reactions). NMDCO_relaxed.owl ENVO:2000026 biolink:NamedThing chromodynamic energy Potential energy due to the energy of the gluon-mediated field of the strong force, binding quarks together into hadrons. NMDCO_relaxed.owl ENVO:2000027 biolink:NamedThing elastic energy potential energy due to the deformation of a material (or its container) exhibiting a restorative force. NMDCO_relaxed.owl ENVO:2000030 biolink:NamedThing radiant energy Potential energy which is stored in the fields of propagated by electromagnetic radiation. NMDCO_relaxed.owl ENVO:2000031 biolink:NamedThing rest energy potential energy due to an object's rest mass. NMDCO_relaxed.owl ENVO:2000029 biolink:NamedThing sound wave energy Mechanical wave energy which is realised when an acoustic wave propagates through a material. NMDCO_relaxed.owl ENVO:2000033 biolink:NamedThing wind wave energy Mechanical wave energy which inheres in an atmosphere and is realised during an atmospheric wind. NMDCO_relaxed.owl ENVO:2000032 biolink:NamedThing thermal energy Kinetic energy which is realised through the microscopic motion of particles. NMDCO_relaxed.owl ENVO:2000034 biolink:NamedThing geothermal energy Thermal energy which propagates through a solid (typically rocky) astronomical body. NMDCO_relaxed.owl ENVO:2000035 biolink:NamedThing stellar radiation energy NMDCO_relaxed.owl ENVO:3100032 biolink:NamedThing fluorescence of water The fluorescence of some water. NMDCO_relaxed.owl PATO:0000018 biolink:NamedThing fluorescence A luminous flux quality inhering in a bearer by virtue of the bearer's emitting longer wavelength light following the absorption of shorter wavelength radiation; fluorescence is common with aromatic compounds with several rings joined together. NMDCO_relaxed.owl FOODON:00001001 biolink:NamedThing orange juice (liquid) NMDCO_relaxed.owl FOODON:03301103 biolink:NamedThing orange juice NMDCO_relaxed.owl FOODON:03430109 biolink:NamedThing food (liquid, low viscosity) A liquid that flows very easily at room temperature. Examples are: water, apple juice, sherry, acidophilus milk, whipping cream and some heavy liqueurs. The range of low viscosity liquid spans sucrose solutions between 0 and 45% solids (viscosity range from 1 to 10 centipoise). Prefer 'solid pieces' factor term to 'small particles' if both appear in the food. NMDCO_relaxed.owl FOODON:00001003 biolink:NamedThing fermented agave juice The juice products which are made from the fermented sap of the maguey (agave) plant. NMDCO_relaxed.owl FOODON:00001103 biolink:NamedThing fermented agave beverage This food product type includes beverage products which are made from the fermented sap of the maguey (agave) plant. NMDCO_relaxed.owl FOODON:00001004 biolink:NamedThing fermenting sugar cane juice This food product type includes food products which are made from fermentation of juice extracted from pressed sugarcane. NMDCO_relaxed.owl FOODON:00001097 biolink:NamedThing fermented sugar cane beverage NMDCO_relaxed.owl FOODON:00001005 biolink:NamedThing fermenting elaeis palm sap food product NMDCO_relaxed.owl FOODON:00001096 biolink:NamedThing fermented elaeis palm beverage NMDCO_relaxed.owl FOODON:00001006 biolink:NamedThing mammalian meat food product A food product made of meat, the skeletal muscle and associated fat, and other edible tissues such as organs, livers, skin, brains, bone marrow, kidneys, or lungs, of mammals. NMDCO_relaxed.owl FOODON:00001092 biolink:NamedThing vertebrate animal food product A food product which is derived from or produced by an animal that has a vertibrae. NMDCO_relaxed.owl FOODON:00001248 biolink:NamedThing fish food product A fish food product includes products made from any fish species (aquatic vertebrate with gills and fins). NMDCO_relaxed.owl FOODON:00001251 biolink:NamedThing avian food product NMDCO_relaxed.owl FOODON:00001256 biolink:NamedThing dairy food product A dairy food product has mammilian milk or a milk component as an ingredient. NMDCO_relaxed.owl FOODON:00001274 biolink:NamedThing egg food product NMDCO_relaxed.owl FOODON:00001007 biolink:NamedThing sausage food product A processed meat food product that is made from a sausage. NMDCO_relaxed.owl FOODON:00001010 biolink:NamedThing processed meat food product NMDCO_relaxed.owl FOODON:00001039 biolink:NamedThing cured meat food product NMDCO_relaxed.owl FOODON:00001241 biolink:NamedThing processed pork meat food product NMDCO_relaxed.owl FOODON:03315925 biolink:NamedThing pate NMDCO_relaxed.owl FOODON:00001008 biolink:NamedThing liver paste NMDCO_relaxed.owl FOODON:00002819 biolink:NamedThing liver food product A liver food product is a food product that derives from one or more liver organs. NMDCO_relaxed.owl FOODON:00001009 biolink:NamedThing hot dog A hot dog is a moist sausage of soft, even texture and flavor, often made from advanced meat recovery or meat slurry. Most types are fully cooked, cured or smoked. It is often placed hot in a special purpose soft, sliced hot dog bun. NMDCO_relaxed.owl FOODON:00001224 biolink:NamedThing sausage (cooked) A sausage made with fresh meats, and then fully cooked. NMDCO_relaxed.owl FOODON:00001219 biolink:NamedThing sausage (cooked, smoked) NMDCO_relaxed.owl FOODON:00001132 biolink:NamedThing swine food product Suidae is a family of artiodactyl mammals which are commonly called pigs, hogs or boars. In addition to numerous fossil species, 17 extant species are currently recognized (or 18 counting domestic pigs and wild boars separately), classified into between four and eight genera. The family includes the domestic pig, Sus scrofa domesticus or Sus domesticus, in addition to numerous species of wild pig, such as babirusas and warthogs. All suids, or swine, are native to the Old World, ranging from Asia to Europe and Africa. NMDCO_relaxed.owl FOODON:00001134 biolink:NamedThing bovine meat food product NMDCO_relaxed.owl FOODON:03317170 biolink:NamedThing meat (whole or parts) A meat product is a product organized by the form of - or processing done to - its meat component (a skeletal meat part of an animal or crustacean). NMDCO_relaxed.owl FOODON:03311737 biolink:NamedThing processed food product NMDCO_relaxed.owl FOODON:00001229 biolink:NamedThing processed cheese food product NMDCO_relaxed.owl FOODON:00002196 biolink:NamedThing refined or partially-refined food product NMDCO_relaxed.owl FOODON:00001011 biolink:NamedThing milk formula food product NMDCO_relaxed.owl FOODON:00001091 biolink:NamedThing dried milk food product NMDCO_relaxed.owl FOODON:00001013 biolink:NamedThing cheese food product Cheese is a food derived from milk that is produced in a wide range of flavors, textures, and forms by coagulation of the milk protein casein. NMDCO_relaxed.owl FOODON:00001053 biolink:NamedThing fermented dairy food product NMDCO_relaxed.owl FOODON:00001106 biolink:NamedThing camelid dairy food product NMDCO_relaxed.owl FOODON:00001107 biolink:NamedThing bovine dairy food product NMDCO_relaxed.owl FOODON:00001111 biolink:NamedThing equine dairy food product NMDCO_relaxed.owl FOODON:00001257 biolink:NamedThing milk or milk based food product NMDCO_relaxed.owl FOODON:00001800 biolink:NamedThing dairy dessert food product NMDCO_relaxed.owl FOODON:00001879 biolink:NamedThing frozen dairy food product NMDCO_relaxed.owl FOODON:00001014 biolink:NamedThing yogurt food product A dairy product produced by bacterial fermentation of milk. NMDCO_relaxed.owl FOODON:03303909 biolink:NamedThing cultured dairy product A cultured dairy product is a fermented dairy product in which a microbial starter was introduced to the fermentation process. NMDCO_relaxed.owl FOODON:00001015 biolink:NamedThing plant food product This class includes food products which are derived from or produced by a plant. NMDCO_relaxed.owl FOODON:00002381 biolink:NamedThing food product by organism A food product consisting of food material derived primarily from a single organism. NMDCO_relaxed.owl FOODON:00001184 biolink:NamedThing algal food product This food product type includes food products which are derived from a large, diverse group of photosynthetic organisms. NMDCO_relaxed.owl FOODON:00004242 biolink:NamedThing animal food product A food product deriving from one or more animals. NMDCO_relaxed.owl FOODON:00001016 biolink:NamedThing cabbage food product Cabbage or headed cabbage (comprising several cultivars of Brassica oleracea) is a leafy green or purple biennial plant, grown as an annual vegetable crop for its dense-leaved heads. NMDCO_relaxed.owl FOODON:00001171 biolink:NamedThing cruciferous inflorescence food product NMDCO_relaxed.owl FOODON:00003341 biolink:NamedThing brassica food product A genus of plants in the mustard family (Brassicaceae). The members of the genus are informally known as cruciferous vegetables, cabbages, or mustard plants. NMDCO_relaxed.owl FOODON:00002053 biolink:NamedThing mustard food product NMDCO_relaxed.owl FOODON:00001017 biolink:NamedThing commercial yogurt NMDCO_relaxed.owl FOODON:00001019 biolink:NamedThing wort food product NMDCO_relaxed.owl FOODON:00001102 biolink:NamedThing fermented grain beverage NMDCO_relaxed.owl FOODON:00001051 biolink:NamedThing fermented rice beverage NMDCO_relaxed.owl FOODON:00001062 biolink:NamedThing fermented millet food product NMDCO_relaxed.owl FOODON:00001135 biolink:NamedThing distilled fermented grain beverage NMDCO_relaxed.owl FOODON:00001260 biolink:NamedThing beer beverage Beer is a fermented cereal beverage resulting from the fermentation most commonly of malted barley (though wheat, corn, or rice may included), by a yeast, most commonly Saccharomyces cerevisiae, and flavored by dried flowers of hops, Humulus lupulus. NMDCO_relaxed.owl FOODON:00001020 biolink:NamedThing beer wort food product NMDCO_relaxed.owl FOODON:00001021 biolink:NamedThing acifified beer wort food product NMDCO_relaxed.owl FOODON:00001023 biolink:NamedThing mammalian milk butter Cream component produced by churning and containing not less than 80% milkfat. NMDCO_relaxed.owl FOODON:00001243 biolink:NamedThing animal lipid food product NMDCO_relaxed.owl FOODON:03315150 biolink:NamedThing mammalian milk product NMDCO_relaxed.owl FOODON:00001075 biolink:NamedThing mammalian milk (nonfat, dry) NMDCO_relaxed.owl FOODON:00001217 biolink:NamedThing mammalian milk beverage NMDCO_relaxed.owl FOODON:03420244 biolink:NamedThing mammalian milk whey The serum or watery part of milk that is separated from the thicker or more coagulable part or curd, espcially in the process of making cheese; it contains lactose, minerals and lactalbumin. NMDCO_relaxed.owl FOODON:00001024 biolink:NamedThing pickled cabbage food product NMDCO_relaxed.owl FOODON:00001675 biolink:NamedThing cabbage juice food product NMDCO_relaxed.owl FOODON:00001182 biolink:NamedThing pickled cruciferous food product NMDCO_relaxed.owl FOODON:00001025 biolink:NamedThing camembert cheese food product NMDCO_relaxed.owl FOODON:00001127 biolink:NamedThing cow milk cheese NMDCO_relaxed.owl FOODON:00001027 biolink:NamedThing cheddar cheese food product NMDCO_relaxed.owl FOODON:00001028 biolink:NamedThing Brie cheese food product NMDCO_relaxed.owl FOODON:00001029 biolink:NamedThing gouda cheese food product NMDCO_relaxed.owl FOODON:00001031 biolink:NamedThing gorgonzola cheese food product NMDCO_relaxed.owl FOODON:00001032 biolink:NamedThing swiss cheese food product NMDCO_relaxed.owl FOODON:00001033 biolink:NamedThing emmenthal cheese food product NMDCO_relaxed.owl FOODON:00001036 biolink:NamedThing pont ieveque cheese food product NMDCO_relaxed.owl FOODON:00001081 biolink:NamedThing Bondon cheese food product NMDCO_relaxed.owl FOODON:00002252 biolink:NamedThing soft cheese food product NMDCO_relaxed.owl FOODON:00001065 biolink:NamedThing blue cheese food product NMDCO_relaxed.owl FOODON:00001035 biolink:NamedThing new zealand cheddar cheese food product NMDCO_relaxed.owl FOODON:00001037 biolink:NamedThing vacherin mont dor cheese food product NMDCO_relaxed.owl FOODON:00001128 biolink:NamedThing Limburger cheese food product A very strong smelling, soft cow's milk cheese made by fermentation involving the bacterium Brevibacterium linens. NMDCO_relaxed.owl FOODON:00001038 biolink:NamedThing pork meat food product A food product made from domestic pig meat (Sus domesticus or Sus scrofa scrofa). NMDCO_relaxed.owl FOODON:00002663 biolink:NamedThing pork food product NMDCO_relaxed.owl FOODON:00001040 biolink:NamedThing chicken meat food product NMDCO_relaxed.owl FOODON:00001131 biolink:NamedThing poultry meat food product A food product made from domesticated bird meat. NMDCO_relaxed.owl FOODON:00001284 biolink:NamedThing duck meat food product NMDCO_relaxed.owl FOODON:00001285 biolink:NamedThing goose meat food product NMDCO_relaxed.owl FOODON:00001286 biolink:NamedThing turkey meat food product A turkey meat food product is any food product made predominantly of turkey parts. NMDCO_relaxed.owl FOODON:00001041 biolink:NamedThing beef food product NMDCO_relaxed.owl FOODON:00001045 biolink:NamedThing ice cream food product NMDCO_relaxed.owl FOODON:00001149 biolink:NamedThing confectionery food product Food items that are rich in sugar, any one or type of which is called a confection. Modern usage may include substances rich in artificial sweeteners as well. NMDCO_relaxed.owl FOODON:00001214 biolink:NamedThing candy food product A confection made from a concentrated solution of sugar in water, to which flavorings and colorants are added. NMDCO_relaxed.owl FOODON:00001280 biolink:NamedThing chocolate food product NMDCO_relaxed.owl FOODON:00001216 biolink:NamedThing cream food product NMDCO_relaxed.owl FOODON:00001771 biolink:NamedThing cow milk based food product NMDCO_relaxed.owl FOODON:00001878 biolink:NamedThing frozen dairy dessert NMDCO_relaxed.owl FOODON:00001046 biolink:NamedThing animal seafood product A seafood product is a vertebrate or invertibrate organism from an aquatic environment. NMDCO_relaxed.owl FOODON:00001176 biolink:NamedThing invertebrate animal food product NMDCO_relaxed.owl FOODON:00001252 biolink:NamedThing animal derived beverage NMDCO_relaxed.owl FOODON:03302001 biolink:NamedThing animal-derived food NMDCO_relaxed.owl FOODON:00001048 biolink:NamedThing meshanger cheese food product NMDCO_relaxed.owl FOODON:00001082 biolink:NamedThing bitter cheese food product NMDCO_relaxed.owl FOODON:00001124 biolink:NamedThing caprine cheese food product NMDCO_relaxed.owl FOODON:00001125 biolink:NamedThing ovine cheese food product NMDCO_relaxed.owl FOODON:00001126 biolink:NamedThing bovine cheese food product NMDCO_relaxed.owl FOODON:00001049 biolink:NamedThing pork chop food product NMDCO_relaxed.owl FOODON:00002301 biolink:NamedThing pork cured meat food product NMDCO_relaxed.owl FOODON:03312053 biolink:NamedThing pork (dehydrated) NMDCO_relaxed.owl FOODON:00001050 biolink:NamedThing tempeh food product A food product having tempeh as a defining ingredient NMDCO_relaxed.owl FOODON:00001078 biolink:NamedThing fermented soybean food product A food product having fermented soyabeans as a defining ingredient NMDCO_relaxed.owl FOODON:00001070 biolink:NamedThing miso food product A food produced by fermenting rice, barley and/or soybeans, with salt and the mold koji-kin (Aspergillus oryzae). NMDCO_relaxed.owl FOODON:00001235 biolink:NamedThing soy sauce food product NMDCO_relaxed.owl FOODON:00001838 biolink:NamedThing fermented cereal beverage NMDCO_relaxed.owl FOODON:00001052 biolink:NamedThing amasake food product NMDCO_relaxed.owl FOODON:00001060 biolink:NamedThing awamori food product NMDCO_relaxed.owl FOODON:00001076 biolink:NamedThing sake food product Sake is a fermented rice beverage resulting from the fermentation of rice with the mold Aspergillus oryzae and, in parallel, with the yeast Saccharomyces cerevisiae [wikipedia:sake] NMDCO_relaxed.owl FOODON:00001080 biolink:NamedThing tape kefan food product NMDCO_relaxed.owl FOODON:00001258 biolink:NamedThing food (fermented) NMDCO_relaxed.owl FOODON:00001054 biolink:NamedThing fermented fish or seafood food product NMDCO_relaxed.owl FOODON:00001069 biolink:NamedThing fermented fruit food product NMDCO_relaxed.owl FOODON:00001073 biolink:NamedThing vinegar food product NMDCO_relaxed.owl FOODON:00001094 biolink:NamedThing fermented beverage NMDCO_relaxed.owl FOODON:03310006 biolink:NamedThing fermented bean product NMDCO_relaxed.owl FOODON:00001055 biolink:NamedThing sea water fish food product NMDCO_relaxed.owl FOODON:00001104 biolink:NamedThing sea water fish egg food product This food product type includes food products which are made from eggs laid by the sea water fish. NMDCO_relaxed.owl FOODON:00001293 biolink:NamedThing shellfish food product NMDCO_relaxed.owl FOODON:03315173 biolink:NamedThing fish product (unspecified species) A fish product is a home-made or commercially produced or retail or wholesale product containing substantial amounts of freshwater or saltwater fish and/or shellfish flesh. Note that this category should avoid items that mention a particular species of fish or shellfish. NMDCO_relaxed.owl FOODON:00001250 biolink:NamedThing fish egg food product NMDCO_relaxed.owl FOODON:00001056 biolink:NamedThing flour food product A fine powder made from cereals or other starchy food sources. NMDCO_relaxed.owl FOODON:00001093 biolink:NamedThing cereal grain food product NMDCO_relaxed.owl FOODON:00001141 biolink:NamedThing wheat food product NMDCO_relaxed.owl FOODON:00001185 biolink:NamedThing rice food product NMDCO_relaxed.owl FOODON:00001186 biolink:NamedThing buckewheat food product NMDCO_relaxed.owl FOODON:00001187 biolink:NamedThing sorghum food product NMDCO_relaxed.owl FOODON:00001189 biolink:NamedThing oat food product NMDCO_relaxed.owl FOODON:00001190 biolink:NamedThing rye food product NMDCO_relaxed.owl FOODON:00001191 biolink:NamedThing barley food product NMDCO_relaxed.owl FOODON:00001192 biolink:NamedThing quinoa food product NMDCO_relaxed.owl FOODON:00002038 biolink:NamedThing millet food product NMDCO_relaxed.owl FOODON:00001057 biolink:NamedThing plant fruit food product A food product derived from plant fruit. NMDCO_relaxed.owl FOODON:00001261 biolink:NamedThing vegetable food product Any plant food product which, typically, is constituted by intact parts from one or more annual plants cultivated as field and garden crops in the open and under glass, and used almost exclusively for food. NMDCO_relaxed.owl FOODON:00001783 biolink:NamedThing cowpea vegetable food product NMDCO_relaxed.owl FOODON:00002153 biolink:NamedThing plant seed vegetable food product NMDCO_relaxed.owl FOODON:00002156 biolink:NamedThing plant stem or spear vegetable food product NMDCO_relaxed.owl FOODON:00002333 biolink:NamedThing vegetable pickle food product NMDCO_relaxed.owl FOODON:00001058 biolink:NamedThing fruit extract food product NMDCO_relaxed.owl FOODON:00001140 biolink:NamedThing fruit juice food product NMDCO_relaxed.owl FOODON:00001150 biolink:NamedThing cucurbit fruit food product NMDCO_relaxed.owl FOODON:00001151 biolink:NamedThing citrus fruit food product A citrus fruit is botanically classified as a type of berry called a hesperidium that has a thick, leathery rind, with numerous oil glands, and a large flesh portion composed of several wedge-shaped sections. Unlike pome fruit, such as the apple, the citrus fruit is derived from a superior ovary, an ovary completely separate from the calyx. NMDCO_relaxed.owl FOODON:00001158 biolink:NamedThing pomaceous fruit food product NMDCO_relaxed.owl FOODON:00001163 biolink:NamedThing solanaceous fruit food product NMDCO_relaxed.owl FOODON:00001640 biolink:NamedThing berry food product NMDCO_relaxed.owl FOODON:00001891 biolink:NamedThing fruit salad food product NMDCO_relaxed.owl FOODON:00002141 biolink:NamedThing plant fruit as vegetable food product A plant fruit food product which is labeled (in common language or by regulation) as a vegetable food product. NMDCO_relaxed.owl FOODON:00001059 biolink:NamedThing apple juice Apple juice is a fruit juice made by the maceration and pressing of an apple. NMDCO_relaxed.owl FOODON:00001156 biolink:NamedThing citrus fruit juice NMDCO_relaxed.owl FOODON:00001157 biolink:NamedThing pomaceous fruit juice beverage NMDCO_relaxed.owl FOODON:00001611 biolink:NamedThing apple food product NMDCO_relaxed.owl FOODON:00001613 biolink:NamedThing apple vinegar food product NMDCO_relaxed.owl FOODON:00001061 biolink:NamedThing bacon food product Any of certain cuts of meat taken from the sides, belly or back of a pig that may be cured and/or smoked. NMDCO_relaxed.owl FOODON:00001063 biolink:NamedThing millet beer food product NMDCO_relaxed.owl FOODON:00001064 biolink:NamedThing bottled beer food product NMDCO_relaxed.owl FOODON:00001067 biolink:NamedThing buttermilk food product NMDCO_relaxed.owl FOODON:00001118 biolink:NamedThing cattle dairy food product NMDCO_relaxed.owl FOODON:00001071 biolink:NamedThing grape must A grape berry food product which is the juice of freshly pressed grapes that contains some amount of pulp, skins, stems, and seeds. NMDCO_relaxed.owl FOODON:00001162 biolink:NamedThing grape extract NMDCO_relaxed.owl FOODON:00001133 biolink:NamedThing condiment food product A relish, sauce, or seasoning added to food to impart a particular flavour or to complement the dish. NMDCO_relaxed.owl FOODON:00001083 biolink:NamedThing sugar condiment NMDCO_relaxed.owl FOODON:00001242 biolink:NamedThing spice or herb A vegetable product such as leaves, flowers, seeds and roots that is rich in essential oils and aromatic principles. Used mainly a a condiment. NMDCO_relaxed.owl FOODON:00001290 biolink:NamedThing salad dressing A sauce for a salad. NMDCO_relaxed.owl FOODON:00001610 biolink:NamedThing apple condiment NMDCO_relaxed.owl FOODON:00002262 biolink:NamedThing soybean condiment NMDCO_relaxed.owl FOODON:00002300 biolink:NamedThing sweetener food product NMDCO_relaxed.owl FOODON:00001074 biolink:NamedThing barley malt vinegar NMDCO_relaxed.owl FOODON:00001919 biolink:NamedThing grain based vinegar food product NMDCO_relaxed.owl FOODON:00001632 biolink:NamedThing barley flour food product NMDCO_relaxed.owl FOODON:00001077 biolink:NamedThing salt pork meat food product NMDCO_relaxed.owl FOODON:00002266 biolink:NamedThing soybean food product A soybean food product is a product derived from the soybean plant. NMDCO_relaxed.owl FOODON:00001079 biolink:NamedThing food (pickled) A food preserved by soaking and storing it in vinegar or brine. NMDCO_relaxed.owl FOODON:00002645 biolink:NamedThing food product by process A food product organized by the process which it results from. NMDCO_relaxed.owl FOODON:00001181 biolink:NamedThing food (cooked) NMDCO_relaxed.owl FOODON:00001626 biolink:NamedThing bakery food product NMDCO_relaxed.owl FOODON:00002158 biolink:NamedThing food (preserved) NMDCO_relaxed.owl FOODON:00001086 biolink:NamedThing kefir food product NMDCO_relaxed.owl FOODON:00001087 biolink:NamedThing vegetable oil food product A lipid material derived from plants. Physically, oils are liquid at room temperature. NMDCO_relaxed.owl FOODON:03310387 biolink:NamedThing oil NMDCO_relaxed.owl FOODON:03460263 biolink:NamedThing vegetable fat or oil A fat or oil derived from vegetable material NMDCO_relaxed.owl FOODON:03316694 biolink:NamedThing vegetable fat food product NMDCO_relaxed.owl FOODON:00001088 biolink:NamedThing flaxseed oil An oil used as a nutritional supplement and is a traditional European ethnic food, highly regarded for its nutty flavor. NMDCO_relaxed.owl FOODON:00001859 biolink:NamedThing flaxseed food product NMDCO_relaxed.owl FOODON:03420307 biolink:NamedThing seed oil The oil produced by pressing or extracting lipids from plant seeds (e.g. grapeseed oil, rapeseed oil, linseed oil) /AM NMDCO_relaxed.owl FOODON:00001089 biolink:NamedThing corn flour food product NMDCO_relaxed.owl FOODON:00001210 biolink:NamedThing wheat flour food product NMDCO_relaxed.owl FOODON:00001142 biolink:NamedThing maize (corn) food product A food product deriving primarily from corn (maize). NMDCO_relaxed.owl FOODON:00001090 biolink:NamedThing sour milk beverage NMDCO_relaxed.owl FOODON:00001120 biolink:NamedThing camelid milk beverage NMDCO_relaxed.owl FOODON:00001121 biolink:NamedThing equine milk beverage NMDCO_relaxed.owl FOODON:03307539 biolink:NamedThing food (dried) NMDCO_relaxed.owl FOODON:00001203 biolink:NamedThing vetch seed (whole, dried) A product of the dry seeds of Vicia sativa. NMDCO_relaxed.owl FOODON:00002752 biolink:NamedThing bean (whole, dried) A whole dried bean is a bean resulting from natural or mechanical air drying applied to a bean or bean pod. NMDCO_relaxed.owl FOODON:00001173 biolink:NamedThing plant seed food product NMDCO_relaxed.owl FOODON:00001215 biolink:NamedThing cacao food product A food product derived from Theobroma cacao. NMDCO_relaxed.owl FOODON:00002151 biolink:NamedThing plant seed based bakery food product NMDCO_relaxed.owl FOODON:03304497 biolink:NamedThing edible seed food product NMDCO_relaxed.owl FOODON:03301977 biolink:NamedThing beverage food product A liquid prepared for consumption, or a product that can be combined with water or milk to make one. NMDCO_relaxed.owl FOODON:00001253 biolink:NamedThing plant derived beverage NMDCO_relaxed.owl FOODON:03315552 biolink:NamedThing juice beverage NMDCO_relaxed.owl FOODON:00001254 biolink:NamedThing plant derived fermented beverage NMDCO_relaxed.owl FOODON:00001136 biolink:NamedThing distilled fermented beverage NMDCO_relaxed.owl FOODON:00001159 biolink:NamedThing fermented pomaceous fruit beverage NMDCO_relaxed.owl FOODON:00001098 biolink:NamedThing fermented apple beverage NMDCO_relaxed.owl FOODON:00001099 biolink:NamedThing apple beverage NMDCO_relaxed.owl FOODON:00001100 biolink:NamedThing orange fruit beverage NMDCO_relaxed.owl FOODON:00002071 biolink:NamedThing orange food product NMDCO_relaxed.owl FOODON:00002423 biolink:NamedThing agave food product NMDCO_relaxed.owl FOODON:00001105 biolink:NamedThing avian egg food product A food product made from an avian egg. NMDCO_relaxed.owl FOODON:00001283 biolink:NamedThing poultry food product A food product from a category of domestic birds kept for meat, eggs, and feathers including fowl such as chickens, turkeys, and waterfowls such as domestic ducks and geese and other meat birds such as pigeons and doves and games birds including pheasants. NMDCO_relaxed.owl FOODON:00001114 biolink:NamedThing zebra dairy food product NMDCO_relaxed.owl FOODON:00001777 biolink:NamedThing cow milk dessert NMDCO_relaxed.owl FOODON:00001129 biolink:NamedThing goat milk cheese food product NMDCO_relaxed.owl FOODON:00001130 biolink:NamedThing sheep milk cheese food product NMDCO_relaxed.owl FOODON:00001714 biolink:NamedThing food product component A food product which normally exists as an ingredient to another food product, rather than eaten on its own, and is more complex than a chemical food component. NMDCO_relaxed.owl FOODON:00001857 biolink:NamedThing food flavoring or seasoning product NMDCO_relaxed.owl FOODON:00001867 biolink:NamedThing food dressing product NMDCO_relaxed.owl FOODON:03420228 biolink:NamedThing extract, concentrate or isolate of plant or animal A physical-chemical component separated from the food source or its parts by extraction, centrifugation, filtration, heat processing, expressing or a similar process. The separated component may be converted through further processing. If this is done, the final substance is indexed. A water-extracted component may remain in aqueous dispersion. The extract, concentrate or isolate is indexed in preference to the anatomic part from which it is derived. For example, peanut oil is indexed under *PEANUT* combined wih *FAT OR OIL* rather than with *SEED OR KERNEL*. On the other hand, fruit and vegetable juices can be indexed under *FRUIT JUICE OR NECTAR* or *VEGETABLE JUICE* (A. PRODUCT TYPE); therefore the anatomic part of the plant should be indexed. NMDCO_relaxed.owl FOODON:00001138 biolink:NamedThing tea based beverage product A beverage product derived from leaves of the tea plant (Camellia sinensis). NMDCO_relaxed.owl FOODON:00001255 biolink:NamedThing nonfermented plant derived beverage product NMDCO_relaxed.owl FOODON:00001139 biolink:NamedThing coffee based beverage product NMDCO_relaxed.owl FOODON:00001246 biolink:NamedThing hot chocolate food product NMDCO_relaxed.owl FOODON:00001247 biolink:NamedThing mate food product NMDCO_relaxed.owl FOODON:03316079 biolink:NamedThing herbal infusion NMDCO_relaxed.owl FOODON:00002275 biolink:NamedThing steeped beverage product NMDCO_relaxed.owl FOODON:03301444 biolink:NamedThing vegetable juice food product NMDCO_relaxed.owl FOODON:00002316 biolink:NamedThing tomato juice food product NMDCO_relaxed.owl FOODON:00001147 biolink:NamedThing plant root food product A food product derived from or produced by a plant root. NMDCO_relaxed.owl FOODON:00001165 biolink:NamedThing solanaceous food product NMDCO_relaxed.owl FOODON:00001166 biolink:NamedThing plant inflorescence food product NMDCO_relaxed.owl FOODON:00001169 biolink:NamedThing cruciferous food product NMDCO_relaxed.owl FOODON:00001174 biolink:NamedThing plant lipid food product NMDCO_relaxed.owl FOODON:00001175 biolink:NamedThing plant stem food product NMDCO_relaxed.owl FOODON:00001262 biolink:NamedThing botanical fruit food product NMDCO_relaxed.owl FOODON:03460177 biolink:NamedThing plant seed or nut food product NMDCO_relaxed.owl FOODON:00001146 biolink:NamedThing solanaceous root food product NMDCO_relaxed.owl FOODON:00001148 biolink:NamedThing potato food product A potato food product is any product derived from potatoes. NMDCO_relaxed.owl FOODON:00002373 biolink:NamedThing food product by meal type A meal type is the name of an eating occasion that may have location, food type, or other customary contextual features. (Damion's 1st draft definition) NMDCO_relaxed.owl FOODON:03303220 biolink:NamedThing dessert food NMDCO_relaxed.owl FOODON:00001152 biolink:NamedThing melon fruit food product The fleshy fruit (false berry) of a plant of the family Cucurbitaceae. NMDCO_relaxed.owl FOODON:00002029 biolink:NamedThing melon food product NMDCO_relaxed.owl FOODON:00001153 biolink:NamedThing muskmelon (Cucumis melo) fruit food product NMDCO_relaxed.owl FOODON:00001154 biolink:NamedThing citrullus lanatus fruit food product Citrullus lanatus is a plant species in the family Cucurbitaceae, a vine-like (scrambler and trailer) flowering plant originally from sub-Saharan Africa. It is cultivated for its fruit. The subdivision of this species into two varieties, watermelons (Citrullus lanatus (Thunb.) var. lanatus) and citron melons (Citrullus lanatus var. citroides (L. H. Bailey) Mansf.) NMDCO_relaxed.owl FOODON:00001161 biolink:NamedThing citrus fruit extract food product NMDCO_relaxed.owl FOODON:00001160 biolink:NamedThing pomaceous fruit extract NMDCO_relaxed.owl FOODON:00001170 biolink:NamedThing grape berry food product NMDCO_relaxed.owl FOODON:00001164 biolink:NamedThing tomato food product A food product deriving from one or more tomatoes. NMDCO_relaxed.owl FOODON:00001172 biolink:NamedThing nut food product NMDCO_relaxed.owl FOODON:00001264 biolink:NamedThing legume food product A one-celled fruit (pod) usually dehiscing down both sutures, and having the seed attached along a ventral suture. (Roubik 1995) NMDCO_relaxed.owl FOODON:00002664 biolink:NamedThing lipid food product A lipid food product is a food product made primarily of plant or animal fat or oil NMDCO_relaxed.owl FOODON:00001177 biolink:NamedThing insect food product NMDCO_relaxed.owl FOODON:00001178 biolink:NamedThing honey food product NMDCO_relaxed.owl FOODON:00001218 biolink:NamedThing bee food product NMDCO_relaxed.owl FOODON:00002157 biolink:NamedThing plant sweetener NMDCO_relaxed.owl FOODON:00001180 biolink:NamedThing prepared food product Food product that is 1) ready or nearly ready for consumption; 2) usually a composite of several foods or ingredients that often belong to distinct product types; 3) usually formulated, mixed and partially or fully cooked. NMDCO_relaxed.owl FOODON:00002454 biolink:NamedThing food product by quality A class which contains food product categories qualified by a quality such as granularity or temperature, which is useful for tasks like food inspection where little prior knowledge of how the food came to be is available. Some terms like "food (frozen)" are both a quality descriptor and the output of a process. NMDCO_relaxed.owl FOODON:00002501 biolink:NamedThing multi-component food product A food product consisting of food material derived from ingredients sourced from multiple organisms. NMDCO_relaxed.owl FOODON:00001183 biolink:NamedThing bread food product NMDCO_relaxed.owl FOODON:00002456 biolink:NamedThing food (baked) NMDCO_relaxed.owl FOODON:00003395 biolink:NamedThing multi-component wheat food product NMDCO_relaxed.owl FOODON:00001212 biolink:NamedThing pastry food product NMDCO_relaxed.owl FOODON:00001193 biolink:NamedThing fonio food product NMDCO_relaxed.owl FOODON:00001194 biolink:NamedThing dry pea food product A product of the dry seeds of plants of the genus Pisum. NMDCO_relaxed.owl FOODON:00001209 biolink:NamedThing pulse food product PULSES are annual leguminous crops yielding from one to 12 grains or seeds of variable size, shape and colour within a pod. They are used for both food and feed. The term "pulses" is limited to crops harvested solely for dry grain, thereby excludingcrops harvested green for food (green peas, green beans, etc.) which are classified as vegetable crops. Also excluded are those crops used mainly for oil extraction (e.g.soybeand and groundnuts) and leguminous crops (e.g. seeds of clover and alfalfa) that are used exclusively for sowing purposes. NMDCO_relaxed.owl FOODON:00001198 biolink:NamedThing broad bean (whole, dried) A product of the dry seeds of plants of the genus Vicia. NMDCO_relaxed.owl FOODON:00001199 biolink:NamedThing chickpea food product A product of the dry seeds of Cicer arietinum. NMDCO_relaxed.owl FOODON:00001200 biolink:NamedThing cowpea (pulse) food product A product of the dry seeds of Vigna unguiculata. NMDCO_relaxed.owl FOODON:00001201 biolink:NamedThing dry bean food product A dry bean food product refers to a bean product made from a Phaseolus species plant whose seeds are harvested at complete maturity. NMDCO_relaxed.owl FOODON:00001204 biolink:NamedThing yam bean food product Pachyrhizus erosus, commonly known as jicama Mexican yam bean, or Mexican turnip, is the name of a native Mexican vine, although the name most commonly refers to the plant's edible tuberous root. Jícama is a species in the genus Pachyrhizus in the bean family (Fabaceae). Plants in this genus are commonly referred to as yam bean, although the term "yam bean" can be another name for jícama. In contrast to the root, the remainder of the jícama plant is very poisonous; the seeds contain the toxin rotenone, which is used to poison insects and fish. FAO: The yam bean is a legume but unlike its close relatives the soybean and other beans, the yam bean is cultivated for its large, tuberous roots. NMDCO_relaxed.owl FOODON:00001205 biolink:NamedThing velvet bean (whole, dried) A product of the dry seeds of Mucuna pruriens var. utilis. NMDCO_relaxed.owl FOODON:00001206 biolink:NamedThing lupin seed food product NMDCO_relaxed.owl FOODON:00001207 biolink:NamedThing jack bean (whole, dried) A dry seed of the jack-bean plant. NMDCO_relaxed.owl FOODON:00001208 biolink:NamedThing hyacinth bean food product NMDCO_relaxed.owl FOODON:00001635 biolink:NamedThing bean food product A bean vegetable food product is a human or animal food product - such as a snap, shell or dry bean product - derived from the fruit pod, seed, or leaf of one of several genera of the flowering plant family Fabaceae. NMDCO_relaxed.owl FOODON:00001202 biolink:NamedThing winged bean food product The winged bean food category covers beans of the winged bean plant NMDCO_relaxed.owl FOODON:00001665 biolink:NamedThing broad bean food product A broad bean food product is a product derived from the broad bean plant. NMDCO_relaxed.owl FOODON:00001757 biolink:NamedThing common bean food product NMDCO_relaxed.owl FOODON:00002012 biolink:NamedThing lupine bean food product NMDCO_relaxed.owl FOODON:00002753 biolink:NamedThing bean (whole) A seed of a bean plant from one of several genera of the flowering plant family (Fabaceae). NMDCO_relaxed.owl FOODON:00002779 biolink:NamedThing jack-bean food product NMDCO_relaxed.owl FOODON:00004156 biolink:NamedThing velvet bean food product A bean food product made from velvet bean. NMDCO_relaxed.owl FOODON:03301467 biolink:NamedThing bean substance A bean substance is a substance made by processing seed from a bean plant. NMDCO_relaxed.owl FOODON:00002813 biolink:NamedThing pea food product NMDCO_relaxed.owl FOODON:00002115 biolink:NamedThing pigeon pea vegetable food product A product containing primarily immature ripe pigeon peas. NMDCO_relaxed.owl FOODON:00001196 biolink:NamedThing pigeon pea (whole, dried) A product of the dry seeds of Cajanus cajan. NMDCO_relaxed.owl FOODON:00002781 biolink:NamedThing pigeon pea (whole) A seed of a pigeon pea plant (Cajanus cajan). NMDCO_relaxed.owl FOODON:00001197 biolink:NamedThing bambara groundnut food product A bambara groundnut food product is a product derived from fresh or dried beans of the bambara groundnut plant. NMDCO_relaxed.owl FOODON:00001994 biolink:NamedThing leguminous vegetable food product A food product made from legumes that are considered vegetables, such as immature raw legume pods or seeds. NMDCO_relaxed.owl FOODON:00002780 biolink:NamedThing pigeon pea food product A pigeon pea food product is a food product derived from the pigeon pea plant NMDCO_relaxed.owl FOODON:00002787 biolink:NamedThing vetch food product NMDCO_relaxed.owl FOODON:03301227 biolink:NamedThing broad bean (whole) A seed of a broad bean plant (Vicia faba). NMDCO_relaxed.owl FOODON:00002762 biolink:NamedThing bean (cooked) Cooked bean material is the bean material output of a cooking process applied to dry, rehydrated, or raw (fresh) beans. NMDCO_relaxed.owl FOODON:00002791 biolink:NamedThing vetch seed (whole) A seed of a vetch plant. NMDCO_relaxed.owl FOODON:00002786 biolink:NamedThing velvet bean (whole) A seed of a velvet bean plant (Mucuna pruriens) NMDCO_relaxed.owl FOODON:00002778 biolink:NamedThing jack bean (whole) A seed of a jack seed plant (Canavalia ensiformis). NMDCO_relaxed.owl FOODON:00001211 biolink:NamedThing pasta food product NMDCO_relaxed.owl FOODON:00002125 biolink:NamedThing plant based bakery food product NMDCO_relaxed.owl FOODON:00001220 biolink:NamedThing sausage (smoked) NMDCO_relaxed.owl FOODON:00001221 biolink:NamedThing sausage (raw, smoked) NMDCO_relaxed.owl FOODON:00001225 biolink:NamedThing smoked meat food product NMDCO_relaxed.owl FOODON:03315904 biolink:NamedThing sausage (whole) A food product that is highly seasoned minced meat and is encased in a skin in the shape of a cylinder. NMDCO_relaxed.owl FOODON:00001222 biolink:NamedThing sausage (raw) A sausage made from meats that have not been previously cured. NMDCO_relaxed.owl FOODON:00001223 biolink:NamedThing sausage (dried, fermented) A cured sausage that is fermented and dried. NMDCO_relaxed.owl FOODON:00001281 biolink:NamedThing custard dessert food product A food involving whipped and cooked milk, sugar and egg yolk mixtures. NMDCO_relaxed.owl FOODON:00001696 biolink:NamedThing cattle cured meat food product NMDCO_relaxed.owl FOODON:00001230 biolink:NamedThing mustard seed food product A product made from the seeds of a mustard plant (white or yellow mustard, Sinapis hirta; brown or Indian mustard, Brassica juncea; or black mustard, Brassica nigra). NMDCO_relaxed.owl FOODON:00001231 biolink:NamedThing creamy salad dressing NMDCO_relaxed.owl FOODON:00001232 biolink:NamedThing vinaigrette dressing food product NMDCO_relaxed.owl FOODON:00001233 biolink:NamedThing nut oil food product NMDCO_relaxed.owl FOODON:00001234 biolink:NamedThing mayonnaise food product NMDCO_relaxed.owl FOODON:00001244 biolink:NamedThing coffee beverage A brewed drink prepared from roasted seeds, commonly called coffee beans, of the coffee plant. NMDCO_relaxed.owl FOODON:00001245 biolink:NamedThing tea beverage (liquid) A beverage prepared from the cured leaves of Camellia sinensis by combination with hot or boiling water. NMDCO_relaxed.owl FOODON:00002364 biolink:NamedThing wine or wine-like food product NMDCO_relaxed.owl FOODON:00001747 biolink:NamedThing cocoa beverage NMDCO_relaxed.owl FOODON:00002450 biolink:NamedThing multi-component honey product NMDCO_relaxed.owl FOODON:03316579 biolink:NamedThing multi-component plant food product NMDCO_relaxed.owl FOODON:00001259 biolink:NamedThing non-fruit wine food product NMDCO_relaxed.owl FOODON:00001266 biolink:NamedThing camel milk beverage NMDCO_relaxed.owl FOODON:00001272 biolink:NamedThing zebra milk beverage NMDCO_relaxed.owl FOODON:00001275 biolink:NamedThing hen egg food product A hen egg food product is any food product consisting mainly of hen eggs or derivatives. NMDCO_relaxed.owl FOODON:00001276 biolink:NamedThing apple cider (alcoholic) Cider, hard apple cider, or hard cider in the US, is an alcoholic beverage made from the fermented juice of apples. NMDCO_relaxed.owl FOODON:00001277 biolink:NamedThing orange juice (unpasteurized) NMDCO_relaxed.owl FOODON:00001278 biolink:NamedThing cake food product NMDCO_relaxed.owl FOODON:00001279 biolink:NamedThing cake icing food product NMDCO_relaxed.owl FOODON:03460231 biolink:NamedThing chocolate or cocoa NMDCO_relaxed.owl FOODON:03315302 biolink:NamedThing cocoa food product NMDCO_relaxed.owl FOODON:00001282 biolink:NamedThing ground beef food product A ground beef product is made of beef that has been finely chopped with a knife or a meat grinder (American English) or mincing machine (British English). Ground beef is used in many recipes including hamburgers and spaghetti Bolognese. NMDCO_relaxed.owl FOODON:03302082 biolink:NamedThing beef (dehydrated) NMDCO_relaxed.owl FOODON:00001288 biolink:NamedThing cantaloupe fruit food product Cantaloupe (also known as muskmelon (India and the United States), mushmelon, rockmelon (in Australian states and in New Zealand), sweet melon, spanspek (South Africa), or capuchin (Scotland) refers to a variety of the Cucumis melo species in the Cucurbitaceae family. NMDCO_relaxed.owl FOODON:00001289 biolink:NamedThing potato salad food product NMDCO_relaxed.owl FOODON:00002132 biolink:NamedThing plant based salad food product NMDCO_relaxed.owl FOODON:00002146 biolink:NamedThing plant product dressing NMDCO_relaxed.owl FOODON:00001291 biolink:NamedThing clam food product NMDCO_relaxed.owl FOODON:00002044 biolink:NamedThing mollusc food product NMDCO_relaxed.owl FOODON:00001292 biolink:NamedThing oyster food product NMDCO_relaxed.owl FOODON:00001294 biolink:NamedThing goat milk cheese (unpasteurized) NMDCO_relaxed.owl FOODON:00001295 biolink:NamedThing pecorino cheese A family of hard Italian cheeses made from sheep milk. NMDCO_relaxed.owl FOODON:00001296 biolink:NamedThing sheep milk cheese (unpasteurized) NMDCO_relaxed.owl FOODON:00001298 biolink:NamedThing unpasteurized camel milk beverage NMDCO_relaxed.owl FOODON:00002035 biolink:NamedThing milk dessert food product NMDCO_relaxed.owl FOODON:00002126 biolink:NamedThing plant-based candy NMDCO_relaxed.owl FOODON:00002131 biolink:NamedThing plant based refined or partially-refined food product NMDCO_relaxed.owl FOODON:00002219 biolink:NamedThing salad food product NMDCO_relaxed.owl FOODON:00002139 biolink:NamedThing plant fat or oil refined food product An edible plant fat or oil product with characteristics that consumers desire such as bland flavour and odour, clear appearance, light colour, stability to oxidation and suitability for frying, and which is the result of a refining process that removes free fatty acids. NMDCO_relaxed.owl FOODON:00002165 biolink:NamedThing organ meat product NMDCO_relaxed.owl FOODON:00002175 biolink:NamedThing prepared hen egg product A prepared hen egg product is a product predominantly made of hen egg that has been cooked and may only require defrosting or reheating for consumption. NMDCO_relaxed.owl FOODON:00002265 biolink:NamedThing soybean seed (field) food product NMDCO_relaxed.owl FOODON:00002643 biolink:NamedThing food (dehydrated) A preserved food, where the moisture levels in the food product have been reduced to low levels to improve shelf life. NMDCO_relaxed.owl FOODON:03420152 biolink:NamedThing carbohydrate extract, concentrate, or isolate Extract, concentrate or isolate high in sugar, oligosaccharide or polysaccharide. NMDCO_relaxed.owl FOODON:03301073 biolink:NamedThing sugar (granulated) NMDCO_relaxed.owl FOODON:03307345 biolink:NamedThing sugar (refined) NMDCO_relaxed.owl FOODON:03305536 biolink:NamedThing honey blend table syrup NMDCO_relaxed.owl FOODON:03316271 biolink:NamedThing sugar product NMDCO_relaxed.owl FOODON:03400115 biolink:NamedThing cheese or cheese product (us cfr) Natural cheese, cured or uncured, cheese product (which is further processed), or cheese product analog. NMDCO_relaxed.owl FOODON:03400164 biolink:NamedThing dairy product (us cfr) Milk, a product derived from milk, or a dairy product analog; includes cheese and frozen dairy desserts. [FDA CFSAN 1995] NMDCO_relaxed.owl FOODON:03400148 biolink:NamedThing milk or milk product (us cfr) Milk in all forms, milk-based beverage, cultured milk product, or milk or milk product analog. Index infant formula under *MEAL REPLACEMENT*. NMDCO_relaxed.owl FOODON:03400143 biolink:NamedThing fruit or fruit product (us cfr) Fruit in all forms; includes fruit juices and fruit juice drinks, fruit butters, jellies, preserves, and related products. NMDCO_relaxed.owl FOODON:03400257 biolink:NamedThing fruit or vegetable product (us cfr) Fruits and vegetables in all forms. [FDA CFSAN 1995] NMDCO_relaxed.owl FOODON:03400147 biolink:NamedThing milk or milk product analog (us cfr) Food product having functional characteristics similar to milk or milk products, including cream product analogs, margarine, and milk analogs. Certain alternate ingredients are substituted for those components that are responsible for specific functional properties. NMDCO_relaxed.owl FOODON:03400155 biolink:NamedThing fruit butter, jelly, preserve or related product (us cfr) Semisolid or jelled food prepared from fruit or fruit juice and other ingredients prescribed for the individual products (21 CFR 150). NMDCO_relaxed.owl FOODON:03401270 biolink:NamedThing U.S. code of federal regulations, title 21 food product type Food and Drugs, title 21, Code of Federal Regulations. Original food classification in LanguaL. NMDCO_relaxed.owl FOODON:03400188 biolink:NamedThing confectionery (us cfr) Candy or other food product made with sweeteners and frequently containing nuts, fruits, starches, flavorings and other foods (21 CFR 170.3(n)(9). [FDA CFSAN 1995] NMDCO_relaxed.owl FOODON:03400187 biolink:NamedThing natural cheese (us cfr) Cheese made from milk or milk components, such as cream, by the following process: (1) produce curd through coagulation of milk by bacterial action and/or enzymes and/or acidification and draining of whey. (2) For cured cheese only: cure the curd. Excludes products made through further processing, such as comminuting (see *CHEESE PRODUCT*). NMDCO_relaxed.owl FOODON:03400204 biolink:NamedThing candy (us cfr) Food product prepared by heating a mixture of sweeteners and other optional ingredients according to the specific formula for each subgroup. NMDCO_relaxed.owl FOODON:03400209 biolink:NamedThing fruit jelly (us cfr) Jelled product made from one or more fruit juices and optional ingredients. Includes both fruit jelly, which may be sweetened with nutritive carbohydrate sweeteners, (21 CFR 150.140), and artificially sweetened fruit jelly (21 CFR 150.141). The finished fruit jelly must have a soluble solid content of no less than 65% and the ratio by weight of the fruit ingredient to sweetener in the starting mixture must be no less than 45:55. Artificially sweetened fruit jelly must contain no less than 55% fruit ingredient by weight. NMDCO_relaxed.owl FOODON:03400213 biolink:NamedThing fudge (us cfr) Soft candy prepared by boiling milk, sugar, salt and optional ingredients to the soft-ball stage (238 degrees F.). NMDCO_relaxed.owl FOODON:03400293 biolink:NamedThing soft candy (us cfr) Candy prepared by cooking a mixture of water, sugars and optional ingredients to a temperature of 250 degrees F. or less. NMDCO_relaxed.owl FOODON:03400231 biolink:NamedThing margarine (us cfr) Food product having functional characteristics similar to those of butter; it is in plastic form or liquid emulsion and contains not less than 80% fat whose origin is vegetable or rendered animal carcass fats or a mixture of these as well as other optional ingredients specified by 21 CFR 166.110. NMDCO_relaxed.owl FOODON:03400294 biolink:NamedThing butter product analog (us cfr) Food product having functional characteristics similar to a butter product; it may be nutritionally equivalent or inferior to the product it purports to resemble. NMDCO_relaxed.owl FOODON:03400289 biolink:NamedThing USA agency food product type Food group having common consumption, functional or manufacturing characteristics, e.g. *FRUIT OR VEGETABLE PRODUCT*, *DAIRY PRODUCT*, *CONFECTIONARY*, *PREPARED FOOD PRODUCT*, etc. [FDA CFSAN 1995] NMDCO_relaxed.owl FOODON:03400352 biolink:NamedThing international agency food product type Renamed from *PRODUCT TYPE, CODEX ALIMENTARIUS* in LanguaL 2008. NMDCO_relaxed.owl FOODON:03400356 biolink:NamedThing European Union agency food product type NMDCO_relaxed.owl FOODON:03400643 biolink:NamedThing Codex Alimentarius classification of food and feed commodities Codex Alimentarius, Volume 2 - 1993, Section 2: Pesticide Residues in Food. The Codex Classification of food and animal feed commodities moving in trade and the description of the various items and groups of food and animal feedstuffs included in the present document have been developed by the Codex Committee on Pesticide Residues. It was first adopted by the 18th Session of the Codex Alimentarius Commission, (1989). The Codex Classification includes food commodities and animal feedstuffs for which Codex maximum residue limits will not necessarily be established. The Classification is intended to be as complete a listing of food commodities in trade as possible, classified into groups on the basis of the commodity's similar potential for pesticide residues. The Classification may also be appropriate for other purposes such as setting maximum levels for other types of residues or for other contaminants in food. The Codex Classification should be consulted in order to obtain a precise description of the food or animal feed commodities and, especially, in cases where Codex maximum residue limits have been set for groups of food and groups of animal feedstuffs. The Codex Classification is intended to promote harmonization of the terms used to describe commodities which are subject to maximum residue limits and of the approach to grouping commodities with similar potential for residue for which a common group maximum residue limit can be set. NMDCO_relaxed.owl FOODON:03400874 biolink:NamedThing GS1 Global Product Classification (GPC) The Global System 1 (GS1) Global Product Classification (GPC) is a system that gives buyers and sellers a common language for grouping products in the same way, everywhere in the world.$br/$ The GS1 GPC classification in facet A is currently updated based on June 2017 release of GS1 GPC Standard for Food/Beverage/Tobacco, except for codes pertaining to tobacco. See the GS1 site for details [https://www.gs1.org/standards/gpc]. NMDCO_relaxed.owl FOODON:03400644 biolink:NamedThing a. primary food commodities of plant origin (ccpr) NMDCO_relaxed.owl FOODON:03400650 biolink:NamedThing 02 vegetables (ccpr) Vegetables are foods derived from many different kinds of plants mostly annual and usually cultivated, commonly known by custom and tradition as "vegetables". In several countries, some of these commodities grown on large areas are distinguished as "field crops" or arable crops e.g. sugar beet. For the sake of convenience in this guide such crops are classified under Type 2 Vegetables. Exposure to pesticides is dependent on the particular part of the plant used for food and the growing practices. Vegetables may be consumed in whole or in part and in the form of fresh, dried or processed foods. NMDCO_relaxed.owl FOODON:03400680 biolink:NamedThing 015 pulses (vd) (ccpr) Pulses are derived from the mature seeds naturally or artificially dried, of leguminous plants known as beans (dry) and peas (dry). The seeds in the pods are protected from most pesticides applied during the growing season except pesticides which show a systemic action. The dried beans and peas however are often exposed to post-harvest treatments. The dry pulses are consumed after processing or household cooking. NMDCO_relaxed.owl FOODON:03400777 biolink:NamedThing eurofir food classification NMDCO_relaxed.owl FOODON:03400801 biolink:NamedThing seafood or related product (eurofir) The group includes marine or freshwater fish, molluscs, crustaceans, and other fauna such as reptiles, insects or frogs not in the “Meats” group. The group also includes seafood product analogs and seafood-based sausage or luncheon meat as well as such products as squid ink and clam juice. NMDCO_relaxed.owl FOODON:03400840 biolink:NamedThing beverage (non-milk) (eurofir) Alcoholic or non-alcoholic beverage; excludes milk and milk-based beverages. NMDCO_relaxed.owl FOODON:03400852 biolink:NamedThing miscellaneous food product (eurofir) EFG group 32, Eurocode-2 group 12. NMDCO_relaxed.owl FOODON:03400803 biolink:NamedThing seafood product (eurofir) includes fish offal; a food product whose predominant constituent is fish (e.g. dried and salted fish, smoked fish, canned fish, pickled fish, restructured fish and fish analogues, surimi; fish paste, pâté). NMDCO_relaxed.owl FOODON:03400842 biolink:NamedThing non alcoholic beverage (eurofir) Beverage containing no more than 0.5% alcohol; it may be flavoured, sweetened or carbonated; includes soft drinks and steeped beverages; excludes milk in all forms, fruit juices and vegetable juices. NMDCO_relaxed.owl FOODON:03400845 biolink:NamedThing coffee, tea, cocoa or infusion (eurofir) Beverage prepared by extracting flavour and other components from food sources by percolation and/or immersion in water, usually at near-boiling temperature. The group includes coffee (e.g. instant coffee, coffee and chicory essence), tea, herbal tea (e.g. green tea, black tea, tisane), cocoa beverage and beverage powder. NMDCO_relaxed.owl FOODON:03400861 biolink:NamedThing prepared food product (eurofir) This subgroup includes multicomponent meals, sauces, retail salads, desserts, soups, snacks and other foods where similarity of the product type is more significant than the source of the principal ingredient(s). NMDCO_relaxed.owl FOODON:03400865 biolink:NamedThing soup (eurofir) A liquid food made by simmering meat, poultry, seafood or vegetables, being clear or thickened to the consistency of a thin puree or having milk or cream added, and often containing pieces of solid food such as meat, shellfish, pasta or vegetables. Soup takes precedence over other food products. Examples are egg and lemon soup, oxtail soup, fish soup, rice soup, lentil soup, minestrone, cherry soup. NMDCO_relaxed.owl FOODON:03400960 biolink:NamedThing 50220000 - cereal/grain/pulse products (gs1 gpc) NMDCO_relaxed.owl FOODON:03401061 biolink:NamedThing 50190000 - prepared/preserved foods (gs1 gpc) NMDCO_relaxed.owl FOODON:03400969 biolink:NamedThing 50221200 - processed cereal products (gs1 gpc) NMDCO_relaxed.owl FOODON:03401095 biolink:NamedThing 50192900 - pasta/noodles (gs1 gpc) NMDCO_relaxed.owl FOODON:03411009 biolink:NamedThing polysaccharide-producing plant NMDCO_relaxed.owl FOODON:03411048 biolink:NamedThing carbohydrate-producing plant NMDCO_relaxed.owl FOODON:03411016 biolink:NamedThing starch-producing plant NMDCO_relaxed.owl FOODON:03412344 biolink:NamedThing devils tongue plant NMDCO_relaxed.owl FOODON:03412637 biolink:NamedThing konjac plant NMDCO_relaxed.owl FOODON:03420108 biolink:NamedThing sugar A broad term that includes the nutritive sweeteners dextrose, fructose, galactose, lactose, maltose and sucrose, which are simple carbohydrates with molecules composed of one or two saccharide units. Note that on a product label or in a recipe, 'sugar' means *SUCROSE* and should be so indexed. Use the broad term *SUGAR* only if the specific sugar used is not known or not listed in the vocabulary. NMDCO_relaxed.owl FOODON:03420156 biolink:NamedThing brown sugar Soft sugar whose crystals are covered by a film of refined dark syrup that imparts color, flavor, and moisture. NMDCO_relaxed.owl FOODON:03430130 biolink:NamedThing food (liquid) A state of matter between a solid and a gas, in which a substance has the capacity to flow and conforms to the shape of the container. Liquids range from water to honey, corresponding to a range in viscosity (or apparent viscosity) from 1 to 500 centipoise (viscosity is a measure of a liquid's resistance to flow). Products that are pourable but have a higher viscosity are *SEMILIQUID*. NMDCO_relaxed.owl GO:0000011 biolink:NamedThing vacuole inheritance The distribution of vacuoles into daughter cells after mitosis or meiosis, mediated by interactions between vacuoles and the cytoskeleton. NMDCO_relaxed.owl GO:0007033 biolink:NamedThing vacuole organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vacuole. NMDCO_relaxed.owl GO:0097576 biolink:NamedThing vacuole fusion Merging of two or more vacuoles, or of vacuoles and vesicles within a cell to form a single larger vacuole. NMDCO_relaxed.owl GO:0048308 biolink:NamedThing organelle inheritance The partitioning of organelles between daughter cells at cell division. NMDCO_relaxed.owl GO:0048313 biolink:NamedThing Golgi inheritance The partitioning of Golgi apparatus between daughter cells at cell division. NMDCO_relaxed.owl GO:0000070 biolink:NamedThing mitotic sister chromatid segregation The cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets. NMDCO_relaxed.owl GO:0000819 biolink:NamedThing sister chromatid segregation The cell cycle process in which sister chromatids are organized and then physically separated and apportioned to two or more sets. NMDCO_relaxed.owl GO:0098813 biolink:NamedThing nuclear chromosome segregation The process in which genetic material, in the form of nuclear chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. Nuclear chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles. NMDCO_relaxed.owl GO:0016321 biolink:NamedThing female meiosis chromosome segregation The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a female. NMDCO_relaxed.owl GO:0045132 biolink:NamedThing meiotic chromosome segregation The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle. NMDCO_relaxed.owl GO:1903047 biolink:NamedThing mitotic cell cycle process A process that is part of the mitotic cell cycle. NMDCO_relaxed.owl GO:0007076 biolink:NamedThing mitotic chromosome condensation The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells. NMDCO_relaxed.owl GO:0007077 biolink:NamedThing mitotic nuclear membrane disassembly The mitotic cell cycle process in which the controlled partial or complete breakdown of the nuclear membranes during occurs during mitosis. NMDCO_relaxed.owl GO:0101024 biolink:NamedThing mitotic nuclear membrane organization A mitotic cell cycle process which results in the assembly, arrangement, or disassembly of the nuclear inner or outer membrane during mitosis. NMDCO_relaxed.owl GO:0140014 biolink:NamedThing mitotic nuclear division A mitotic cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell. NMDCO_relaxed.owl GO:1902850 biolink:NamedThing microtubule cytoskeleton organization involved in mitosis Any microtubule cytoskeleton organization that is involved in mitosis. NMDCO_relaxed.owl GO:0000139 biolink:NamedThing Golgi membrane The lipid bilayer surrounding any of the compartments of the Golgi apparatus. NMDCO_relaxed.owl GO:0016020 biolink:NamedThing membrane A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it. NMDCO_relaxed.owl GO:0005640 biolink:NamedThing nuclear outer membrane The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes. NMDCO_relaxed.owl GO:0005774 biolink:NamedThing vacuolar membrane The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell. NMDCO_relaxed.owl GO:0005886 biolink:NamedThing plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. NMDCO_relaxed.owl GO:0012506 biolink:NamedThing vesicle membrane The lipid bilayer surrounding any membrane-bounded vesicle in the cell. NMDCO_relaxed.owl GO:0019867 biolink:NamedThing outer membrane The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites. NMDCO_relaxed.owl GO:0030658 biolink:NamedThing transport vesicle membrane The lipid bilayer surrounding a transport vesicle. NMDCO_relaxed.owl GO:0030659 biolink:NamedThing cytoplasmic vesicle membrane The lipid bilayer surrounding a cytoplasmic vesicle. NMDCO_relaxed.owl GO:0030660 biolink:NamedThing Golgi-associated vesicle membrane The lipid bilayer surrounding a vesicle associated with the Golgi apparatus. NMDCO_relaxed.owl GO:0030667 biolink:NamedThing secretory granule membrane The lipid bilayer surrounding a secretory granule. NMDCO_relaxed.owl GO:0031090 biolink:NamedThing organelle membrane A membrane that is one of the two lipid bilayers of an organelle envelope or the outermost membrane of single membrane bound organelle. NMDCO_relaxed.owl GO:0031253 biolink:NamedThing cell projection membrane The portion of the plasma membrane surrounding a plasma membrane bounded cell surface projection. NMDCO_relaxed.owl GO:0031965 biolink:NamedThing nuclear membrane Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. NMDCO_relaxed.owl GO:0031968 biolink:NamedThing organelle outer membrane The outer, i.e. cytoplasm-facing in a cellular organelle, lipid bilayer of an organelle envelope. NMDCO_relaxed.owl GO:0032127 biolink:NamedThing dense core granule membrane The lipid bilayer surrounding a dense core granule. NMDCO_relaxed.owl GO:0032589 biolink:NamedThing neuron projection membrane The portion of the plasma membrane surrounding a neuron projection. NMDCO_relaxed.owl GO:0042175 biolink:NamedThing nuclear outer membrane-endoplasmic reticulum membrane network The continuous network of membranes encompassing the nuclear outer membrane and the endoplasmic reticulum membrane. NMDCO_relaxed.owl GO:0042589 biolink:NamedThing zymogen granule membrane The lipid bilayer surrounding a zymogen granule. NMDCO_relaxed.owl GO:0060170 biolink:NamedThing ciliary membrane The portion of the plasma membrane surrounding a cilium. NMDCO_relaxed.owl GO:0090741 biolink:NamedThing pigment granule membrane Any membrane that is part of a pigment granule. NMDCO_relaxed.owl GO:0098588 biolink:NamedThing bounding membrane of organelle The lipid bilayer that forms the outer-most layer of an organelle. NMDCO_relaxed.owl GO:0098590 biolink:NamedThing plasma membrane region A membrane that is a (regional) part of the plasma membrane. NMDCO_relaxed.owl GO:0099012 biolink:NamedThing neuronal dense core vesicle membrane The lipid bilayer surrounding a neuronal dense core vesicle. NMDCO_relaxed.owl GO:0099501 biolink:NamedThing exocytic vesicle membrane The lipid bilayer surrounding an exocytic vesicle. NMDCO_relaxed.owl GO:0000226 biolink:NamedThing microtubule cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. NMDCO_relaxed.owl GO:0007010 biolink:NamedThing cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures. NMDCO_relaxed.owl GO:0030036 biolink:NamedThing actin cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. NMDCO_relaxed.owl GO:0030952 biolink:NamedThing establishment or maintenance of cytoskeleton polarity Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures. NMDCO_relaxed.owl GO:0099187 biolink:NamedThing presynaptic cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures and their associated proteins in the presynaptic cytoskeleton. NMDCO_relaxed.owl GO:0099188 biolink:NamedThing postsynaptic cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising cytoskeletal filaments and their associated proteins in the postsynaptic cytoskeleton. NMDCO_relaxed.owl GO:0007017 biolink:NamedThing microtubule-based process Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins. NMDCO_relaxed.owl GO:0007018 biolink:NamedThing microtubule-based movement A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules. NMDCO_relaxed.owl GO:0099112 biolink:NamedThing microtubule polymerization based protein transport The transport of a protein driven by polymerization of a microtubule to which it is attached. NMDCO_relaxed.owl GO:0099118 biolink:NamedThing microtubule-based protein transport A microtubule-based process that results in the transport of proteins. NMDCO_relaxed.owl GO:0016043 biolink:NamedThing cellular component organization A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component. NMDCO_relaxed.owl GO:0006325 biolink:NamedThing chromatin organization The assembly or remodeling of chromatin composed of DNA complexed with histones, other associated proteins, and sometimes RNA. NMDCO_relaxed.owl GO:0006996 biolink:NamedThing organelle organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. NMDCO_relaxed.owl GO:0006997 biolink:NamedThing nucleus organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleus. NMDCO_relaxed.owl GO:0006998 biolink:NamedThing nuclear envelope organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope. NMDCO_relaxed.owl GO:0007000 biolink:NamedThing nucleolus organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleolus. NMDCO_relaxed.owl GO:0007009 biolink:NamedThing plasma membrane organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the plasma membrane. NMDCO_relaxed.owl GO:0007015 biolink:NamedThing actin filament organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. NMDCO_relaxed.owl GO:0007028 biolink:NamedThing cytoplasm organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. NMDCO_relaxed.owl GO:0007030 biolink:NamedThing Golgi organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus. NMDCO_relaxed.owl GO:0007528 biolink:NamedThing neuromuscular junction development A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction. NMDCO_relaxed.owl GO:0010256 biolink:NamedThing endomembrane system organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endomembrane system. NMDCO_relaxed.owl GO:0016050 biolink:NamedThing vesicle organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vesicle. NMDCO_relaxed.owl GO:0016325 biolink:NamedThing oocyte microtubule cytoskeleton organization Formation and maintenance of a polarized microtubule array originating from a microtubule-organizing center (MTOC) in the oocyte. An example of this is found in Drosophila melanogaster. NMDCO_relaxed.owl GO:0022411 biolink:NamedThing cellular component disassembly A cellular process that results in the breakdown of a cellular component. NMDCO_relaxed.owl GO:0022607 biolink:NamedThing cellular component assembly The aggregation, arrangement and bonding together of a cellular component. NMDCO_relaxed.owl GO:0030030 biolink:NamedThing cell projection organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon. NMDCO_relaxed.owl GO:0030198 biolink:NamedThing extracellular matrix organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix. NMDCO_relaxed.owl GO:0030199 biolink:NamedThing collagen fibril organization Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix. NMDCO_relaxed.owl GO:0031032 biolink:NamedThing actomyosin structure organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. The myosin may be organized into filaments. NMDCO_relaxed.owl GO:0031122 biolink:NamedThing cytoplasmic microtubule organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell. NMDCO_relaxed.owl GO:0032528 biolink:NamedThing microvillus organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell. NMDCO_relaxed.owl GO:0033363 biolink:NamedThing secretory granule organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a secretory granule. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. NMDCO_relaxed.owl GO:0034330 biolink:NamedThing cell junction organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix. NMDCO_relaxed.owl GO:0043062 biolink:NamedThing extracellular structure organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite. NMDCO_relaxed.owl GO:0043933 biolink:NamedThing protein-containing complex organization Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein complex. NMDCO_relaxed.owl GO:0044782 biolink:NamedThing cilium organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole. NMDCO_relaxed.owl GO:0045214 biolink:NamedThing sarcomere organization The myofibril assembly process that results in the organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. NMDCO_relaxed.owl GO:0045229 biolink:NamedThing external encapsulating structure organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of external structures that lie outside the plasma membrane and surround the entire cell. NMDCO_relaxed.owl GO:0048753 biolink:NamedThing pigment granule organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pigment granule. NMDCO_relaxed.owl GO:0051276 biolink:NamedThing chromosome organization A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. This term covers covalent modifications at the molecular level as well as spatial relationships among the major components of a chromosome. NMDCO_relaxed.owl GO:0061024 biolink:NamedThing membrane organization A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. NMDCO_relaxed.owl GO:0061109 biolink:NamedThing dense core granule organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dense core granule. A dense core granule is a secretory organelle found in endocrine cells. NMDCO_relaxed.owl GO:0061572 biolink:NamedThing actin filament bundle organization A process that results in the assembly, arrangement of constituent parts, or disassembly of an actin filament bundle. NMDCO_relaxed.owl GO:0071711 biolink:NamedThing basement membrane organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the basement membrane. NMDCO_relaxed.owl GO:0071763 biolink:NamedThing nuclear membrane organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear inner or outer membrane. NMDCO_relaxed.owl GO:0071764 biolink:NamedThing nuclear outer membrane organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear outer membrane. NMDCO_relaxed.owl GO:0071824 biolink:NamedThing protein-DNA complex organization Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA complex. NMDCO_relaxed.owl GO:0071826 biolink:NamedThing protein-RNA complex organization Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a ribonucleoprotein complex. NMDCO_relaxed.owl GO:0097435 biolink:NamedThing supramolecular fiber organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a supramolecular fiber, a polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure. NMDCO_relaxed.owl GO:0098974 biolink:NamedThing postsynaptic actin cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the postsynaptic actin cytoskeleton. NMDCO_relaxed.owl GO:0099014 biolink:NamedThing neuronal dense core vesicle organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuronal dense core vesicle. NMDCO_relaxed.owl GO:0099140 biolink:NamedThing presynaptic actin cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the presynaptic actin cytoskeleton. NMDCO_relaxed.owl GO:0099172 biolink:NamedThing presynapse organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a presynapse. NMDCO_relaxed.owl GO:0099173 biolink:NamedThing postsynapse organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a postsynapse. NMDCO_relaxed.owl GO:0106027 biolink:NamedThing neuron projection organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a neuron, e.g. an axon, or a dendrite. NMDCO_relaxed.owl GO:0120036 biolink:NamedThing plasma membrane bounded cell projection organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a plasma membrane bounded prolongation or process extending from a cell, e.g. a cilium or axon. NMDCO_relaxed.owl GO:0000228 biolink:NamedThing nuclear chromosome A chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact. NMDCO_relaxed.owl GO:0005694 biolink:NamedThing chromosome A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. NMDCO_relaxed.owl GO:0000271 biolink:NamedThing polysaccharide biosynthetic process The chemical reactions and pathways resulting in the formation of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. NMDCO_relaxed.owl GO:0005976 biolink:NamedThing polysaccharide metabolic process The chemical reactions and pathways involving a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. NMDCO_relaxed.owl GO:0000272 biolink:NamedThing polysaccharide catabolic process The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. NMDCO_relaxed.owl GO:0044042 biolink:NamedThing glucan metabolic process The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues. NMDCO_relaxed.owl GO:0009058 biolink:NamedThing biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. NMDCO_relaxed.owl GO:0005978 biolink:NamedThing glycogen biosynthetic process The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues. NMDCO_relaxed.owl GO:0006023 biolink:NamedThing aminoglycan biosynthetic process The chemical reactions and pathways resulting in the formation of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages. NMDCO_relaxed.owl GO:0006024 biolink:NamedThing glycosaminoglycan biosynthetic process The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars. NMDCO_relaxed.owl GO:0006094 biolink:NamedThing gluconeogenesis The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol. NMDCO_relaxed.owl GO:0006412 biolink:NamedThing translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. NMDCO_relaxed.owl GO:0006694 biolink:NamedThing steroid biosynthetic process The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification. NMDCO_relaxed.owl GO:0006699 biolink:NamedThing bile acid biosynthetic process The chemical reactions and pathways resulting in the formation of bile acids, any of a group of steroid carboxylic acids occurring in bile. NMDCO_relaxed.owl GO:0008292 biolink:NamedThing acetylcholine biosynthetic process The chemical reactions and pathways resulting in the formation of acetylcholine, the acetic acid ester of the organic base choline. NMDCO_relaxed.owl GO:0008610 biolink:NamedThing lipid biosynthetic process The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. NMDCO_relaxed.owl GO:0008652 biolink:NamedThing amino acid biosynthetic process The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents. NMDCO_relaxed.owl GO:0009059 biolink:NamedThing macromolecule biosynthetic process The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. NMDCO_relaxed.owl GO:0009101 biolink:NamedThing glycoprotein biosynthetic process The chemical reactions and pathways resulting in the formation of glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. NMDCO_relaxed.owl GO:0009250 biolink:NamedThing glucan biosynthetic process The chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues. NMDCO_relaxed.owl GO:0009309 biolink:NamedThing amine biosynthetic process The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom. NMDCO_relaxed.owl GO:0009713 biolink:NamedThing catechol-containing compound biosynthetic process The chemical reactions and pathways resulting in the formation of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent. NMDCO_relaxed.owl GO:0009821 biolink:NamedThing alkaloid biosynthetic process The chemical reactions and pathways resulting in the formation of alkaloids, nitrogen-containing natural products which are not otherwise classified as nonprotein amino acids, amines, peptides, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones, or primary metabolite (such as purine or pyrimidine bases). NMDCO_relaxed.owl GO:0016051 biolink:NamedThing carbohydrate biosynthetic process The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. NMDCO_relaxed.owl GO:0016053 biolink:NamedThing organic acid biosynthetic process The chemical reactions and pathways resulting in the formation of organic acids, any acidic compound containing carbon in covalent linkage. NMDCO_relaxed.owl GO:0018130 biolink:NamedThing heterocycle biosynthetic process The chemical reactions and pathways resulting in the formation of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings). NMDCO_relaxed.owl GO:0019319 biolink:NamedThing hexose biosynthetic process The chemical reactions and pathways resulting in the formation of hexose, any monosaccharide with a chain of six carbon atoms in the molecule. NMDCO_relaxed.owl GO:0019413 biolink:NamedThing acetate biosynthetic process The chemical reactions and pathways resulting in the formation of acetate, the anion of acetic acid. NMDCO_relaxed.owl GO:0019438 biolink:NamedThing aromatic compound biosynthetic process The chemical reactions and pathways resulting in the formation of aromatic compounds, any substance containing an aromatic carbon ring. NMDCO_relaxed.owl GO:0030213 biolink:NamedThing hyaluronan biosynthetic process The chemical reactions and pathways resulting in the formation of hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine. NMDCO_relaxed.owl GO:0032964 biolink:NamedThing collagen biosynthetic process The chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%). NMDCO_relaxed.owl GO:0033014 biolink:NamedThing tetrapyrrole biosynthetic process The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next. NMDCO_relaxed.owl GO:0034654 biolink:NamedThing nucleobase-containing compound biosynthetic process The chemical reactions and pathways resulting in the formation of nucleobases, nucleosides, nucleotides and nucleic acids. NMDCO_relaxed.owl GO:0035835 biolink:NamedThing indole alkaloid biosynthetic process The chemical reactions and pathways resulting in the formation of an indole alkaloid, an alkaloid containing an indole skeleton. NMDCO_relaxed.owl GO:0042181 biolink:NamedThing ketone biosynthetic process The chemical reactions and pathways resulting in the formation of ketones, a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups. NMDCO_relaxed.owl GO:0042421 biolink:NamedThing norepinephrine biosynthetic process The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine. NMDCO_relaxed.owl GO:0042423 biolink:NamedThing catecholamine biosynthetic process The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. NMDCO_relaxed.owl GO:0042427 biolink:NamedThing serotonin biosynthetic process The chemical reactions and pathways resulting in the formation of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties. NMDCO_relaxed.owl GO:0042435 biolink:NamedThing indole-containing compound biosynthetic process The chemical reactions and pathways resulting in the formation of compounds that contain an indole (2,3-benzopyrrole) skeleton. NMDCO_relaxed.owl GO:0043043 biolink:NamedThing peptide biosynthetic process The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide. NMDCO_relaxed.owl GO:0043604 biolink:NamedThing amide biosynthetic process The chemical reactions and pathways resulting in the formation of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group. NMDCO_relaxed.owl GO:0043650 biolink:NamedThing dicarboxylic acid biosynthetic process The chemical reactions and pathways resulting in the formation of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups. NMDCO_relaxed.owl GO:0044249 biolink:NamedThing cellular biosynthetic process The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells. NMDCO_relaxed.owl GO:0044272 biolink:NamedThing sulfur compound biosynthetic process The chemical reactions and pathways resulting in the formation of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione. NMDCO_relaxed.owl GO:0044283 biolink:NamedThing small molecule biosynthetic process The chemical reactions and pathways resulting in the formation of small molecules, any low molecular weight, monomeric, non-encoded molecule. NMDCO_relaxed.owl GO:0044550 biolink:NamedThing secondary metabolite biosynthetic process The chemical reactions and pathways resulting in the formation of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. NMDCO_relaxed.owl GO:0045222 biolink:NamedThing CD4 biosynthetic process The chemical reactions and pathways resulting in the formation of CD4, a CD marker that occurs on T-helper cells and is involved in MHC class II restricted interactions. NMDCO_relaxed.owl GO:0046112 biolink:NamedThing nucleobase biosynthetic process The chemical reactions and pathways resulting in the formation of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid. NMDCO_relaxed.owl GO:0046189 biolink:NamedThing phenol-containing compound biosynthetic process The chemical reactions and pathways resulting in the formation of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring. NMDCO_relaxed.owl GO:0046219 biolink:NamedThing indolalkylamine biosynthetic process The chemical reactions and pathways resulting in the formation of indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group. NMDCO_relaxed.owl GO:0046364 biolink:NamedThing monosaccharide biosynthetic process The chemical reactions and pathways resulting in the formation of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms. NMDCO_relaxed.owl GO:0046394 biolink:NamedThing carboxylic acid biosynthetic process The chemical reactions and pathways resulting in the formation of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups. NMDCO_relaxed.owl GO:0071897 biolink:NamedThing DNA biosynthetic process The biosynthetic process resulting in the formation of DNA. NMDCO_relaxed.owl GO:0072330 biolink:NamedThing monocarboxylic acid biosynthetic process The chemical reactions and pathways resulting in the formation of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group. NMDCO_relaxed.owl GO:1900620 biolink:NamedThing acetate ester biosynthetic process The chemical reactions and pathways resulting in the formation of an acetate esteran acetate ester, any carboxylic ester where the carboxylic acid component is acetic acid. NMDCO_relaxed.owl GO:1901137 biolink:NamedThing carbohydrate derivative biosynthetic process The chemical reactions and pathways resulting in the formation of carbohydrate derivative. NMDCO_relaxed.owl GO:1901162 biolink:NamedThing primary amino compound biosynthetic process The chemical reactions and pathways resulting in the formation of primary amino compound. NMDCO_relaxed.owl GO:1901362 biolink:NamedThing organic cyclic compound biosynthetic process The chemical reactions and pathways resulting in the formation of organic cyclic compound. NMDCO_relaxed.owl GO:1901566 biolink:NamedThing organonitrogen compound biosynthetic process The chemical reactions and pathways resulting in the formation of organonitrogen compound. NMDCO_relaxed.owl GO:1901576 biolink:NamedThing organic substance biosynthetic process The chemical reactions and pathways resulting in the formation of an organic substance, any molecular entity containing carbon. NMDCO_relaxed.owl GO:1901607 biolink:NamedThing alpha-amino acid biosynthetic process The chemical reactions and pathways resulting in the formation of an alpha-amino acid. NMDCO_relaxed.owl GO:1901617 biolink:NamedThing organic hydroxy compound biosynthetic process The chemical reactions and pathways resulting in the formation of organic hydroxy compound. NMDCO_relaxed.owl GO:0006414 biolink:NamedThing translational elongation The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis. NMDCO_relaxed.owl GO:0010467 biolink:NamedThing gene expression The process in which a gene's sequence is converted into a mature gene product (protein or RNA). This includes the production of an RNA transcript and its processing, as well as translation and maturation for protein-coding genes. NMDCO_relaxed.owl GO:0032774 biolink:NamedThing RNA biosynthetic process The chemical reactions and pathways resulting in the formation of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers. Refers not only to transcription but also to e.g. viral RNA replication. NMDCO_relaxed.owl GO:0009056 biolink:NamedThing catabolic process The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism. NMDCO_relaxed.owl GO:0005980 biolink:NamedThing glycogen catabolic process The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues. NMDCO_relaxed.owl GO:0006007 biolink:NamedThing glucose catabolic process The chemical reactions and pathways resulting in the breakdown of glucose, the aldohexose gluco-hexose. NMDCO_relaxed.owl GO:0006026 biolink:NamedThing aminoglycan catabolic process The chemical reactions and pathways resulting in the breakdown of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages. NMDCO_relaxed.owl GO:0006027 biolink:NamedThing glycosaminoglycan catabolic process The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. NMDCO_relaxed.owl GO:0006308 biolink:NamedThing DNA catabolic process The cellular DNA metabolic process resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one. NMDCO_relaxed.owl GO:0006401 biolink:NamedThing RNA catabolic process The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. NMDCO_relaxed.owl GO:0006516 biolink:NamedThing glycoprotein catabolic process The chemical reactions and pathways resulting in the breakdown of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. NMDCO_relaxed.owl GO:0006581 biolink:NamedThing acetylcholine catabolic process The chemical reactions and pathways resulting in the breakdown of acetylcholine, the acetic acid ester of the organic base choline. NMDCO_relaxed.owl GO:0006706 biolink:NamedThing steroid catabolic process The chemical reactions and pathways resulting in the breakdown of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. NMDCO_relaxed.owl GO:0009057 biolink:NamedThing macromolecule catabolic process The chemical reactions and pathways resulting in the breakdown of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. NMDCO_relaxed.owl GO:0009063 biolink:NamedThing amino acid catabolic process The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents. NMDCO_relaxed.owl GO:0009251 biolink:NamedThing glucan catabolic process The chemical reactions and pathways resulting in the breakdown of glucans, polysaccharides consisting only of glucose residues. NMDCO_relaxed.owl GO:0009310 biolink:NamedThing amine catabolic process The chemical reactions and pathways resulting in the breakdown of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom. NMDCO_relaxed.owl GO:0009822 biolink:NamedThing alkaloid catabolic process The chemical reactions and pathways resulting in the breakdown of alkaloids, nitrogen containing natural products not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases). NMDCO_relaxed.owl GO:0016042 biolink:NamedThing lipid catabolic process The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. NMDCO_relaxed.owl GO:0016052 biolink:NamedThing carbohydrate catabolic process The chemical reactions and pathways resulting in the breakdown of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. NMDCO_relaxed.owl GO:0016054 biolink:NamedThing organic acid catabolic process The chemical reactions and pathways resulting in the breakdown of organic acids, any acidic compound containing carbon in covalent linkage. NMDCO_relaxed.owl GO:0019320 biolink:NamedThing hexose catabolic process The chemical reactions and pathways resulting in the breakdown of hexose, any monosaccharide with a chain of six carbon atoms in the molecule. NMDCO_relaxed.owl GO:0019336 biolink:NamedThing phenol-containing compound catabolic process The chemical reactions and pathways resulting in the breakdown of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring. NMDCO_relaxed.owl GO:0019439 biolink:NamedThing aromatic compound catabolic process The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring. NMDCO_relaxed.owl GO:0019614 biolink:NamedThing catechol-containing compound catabolic process The chemical reactions and pathways resulting in the breakdown of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent. NMDCO_relaxed.owl GO:0030163 biolink:NamedThing protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. NMDCO_relaxed.owl GO:0030214 biolink:NamedThing hyaluronan catabolic process The chemical reactions and pathways resulting in the breakdown of hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine. NMDCO_relaxed.owl GO:0030573 biolink:NamedThing bile acid catabolic process The chemical reactions and pathways resulting in the breakdown of bile acids, any of a group of steroid carboxylic acids occurring in bile. NMDCO_relaxed.owl GO:0030574 biolink:NamedThing collagen catabolic process The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells. NMDCO_relaxed.owl GO:0033015 biolink:NamedThing tetrapyrrole catabolic process The chemical reactions and pathways leading to the breakdown of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next. NMDCO_relaxed.owl GO:0034655 biolink:NamedThing nucleobase-containing compound catabolic process The chemical reactions and pathways resulting in the breakdown of nucleobases, nucleosides, nucleotides and nucleic acids. NMDCO_relaxed.owl GO:0042182 biolink:NamedThing ketone catabolic process The chemical reactions and pathways resulting in the breakdown of ketones, a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups. NMDCO_relaxed.owl GO:0042422 biolink:NamedThing norepinephrine catabolic process The chemical reactions and pathways resulting in the breakdown of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine. NMDCO_relaxed.owl GO:0042424 biolink:NamedThing catecholamine catabolic process The chemical reactions and pathways resulting in the breakdown of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. NMDCO_relaxed.owl GO:0042429 biolink:NamedThing serotonin catabolic process The chemical reactions and pathways resulting in the breakdown of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties. NMDCO_relaxed.owl GO:0042436 biolink:NamedThing indole-containing compound catabolic process The chemical reactions and pathways resulting in the breakdown of compounds that contain an indole (2,3-benzopyrrole) skeleton. NMDCO_relaxed.owl GO:0043171 biolink:NamedThing peptide catabolic process The chemical reactions and pathways resulting in the breakdown of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. NMDCO_relaxed.owl GO:0043605 biolink:NamedThing amide catabolic process The chemical reactions and pathways resulting in the breakdown of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group. NMDCO_relaxed.owl GO:0043649 biolink:NamedThing dicarboxylic acid catabolic process The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups. NMDCO_relaxed.owl GO:0044248 biolink:NamedThing cellular catabolic process The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells. NMDCO_relaxed.owl GO:0044273 biolink:NamedThing sulfur compound catabolic process The chemical reactions and pathways resulting in the breakdown of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione. NMDCO_relaxed.owl GO:0044282 biolink:NamedThing small molecule catabolic process The chemical reactions and pathways resulting in the breakdown of small molecules, any low molecular weight, monomeric, non-encoded molecule. NMDCO_relaxed.owl GO:0045733 biolink:NamedThing acetate catabolic process The chemical reactions and pathways resulting in the breakdown of acetate, the anion of acetic acid. NMDCO_relaxed.owl GO:0046113 biolink:NamedThing nucleobase catabolic process The chemical reactions and pathways resulting in the breakdown of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid. NMDCO_relaxed.owl GO:0046365 biolink:NamedThing monosaccharide catabolic process The chemical reactions and pathways resulting in the breakdown of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms. NMDCO_relaxed.owl GO:0046395 biolink:NamedThing carboxylic acid catabolic process The chemical reactions and pathways resulting in the breakdown of carboxylic acids, any organic acid containing one or more carboxyl (-COOH) groups. NMDCO_relaxed.owl GO:0046700 biolink:NamedThing heterocycle catabolic process The chemical reactions and pathways resulting in the breakdown of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings). NMDCO_relaxed.owl GO:0072329 biolink:NamedThing monocarboxylic acid catabolic process The chemical reactions and pathways resulting in the breakdown of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group. NMDCO_relaxed.owl GO:0099546 biolink:NamedThing protein catabolic process, modulating synaptic transmission Any protein degradation process, occurring at a presynapse, that regulates synaptic transmission. NMDCO_relaxed.owl GO:0140246 biolink:NamedThing protein catabolic process at synapse The chemical reactions and pathways resulting in the breakdown of a protein at a synapse. NMDCO_relaxed.owl GO:0140247 biolink:NamedThing protein catabolic process at presynapse The chemical reactions and pathways resulting in the breakdown of a protein at a presynapse. NMDCO_relaxed.owl GO:0140249 biolink:NamedThing protein catabolic process at postsynapse The chemical reactions and pathways resulting in the breakdown of a protein at a postsynapse. NMDCO_relaxed.owl GO:1901136 biolink:NamedThing carbohydrate derivative catabolic process The chemical reactions and pathways resulting in the breakdown of carbohydrate derivative. NMDCO_relaxed.owl GO:1901143 biolink:NamedThing insulin catabolic process The chemical reactions and pathways resulting in the breakdown of insulin. NMDCO_relaxed.owl GO:1901161 biolink:NamedThing primary amino compound catabolic process The chemical reactions and pathways resulting in the breakdown of primary amino compound. NMDCO_relaxed.owl GO:1901361 biolink:NamedThing organic cyclic compound catabolic process The chemical reactions and pathways resulting in the breakdown of organic cyclic compound. NMDCO_relaxed.owl GO:1901565 biolink:NamedThing organonitrogen compound catabolic process The chemical reactions and pathways resulting in the breakdown of organonitrogen compound. NMDCO_relaxed.owl GO:1901575 biolink:NamedThing organic substance catabolic process The chemical reactions and pathways resulting in the breakdown of an organic substance, any molecular entity containing carbon. NMDCO_relaxed.owl GO:1901606 biolink:NamedThing alpha-amino acid catabolic process The chemical reactions and pathways resulting in the breakdown of an alpha-amino acid. NMDCO_relaxed.owl GO:1901616 biolink:NamedThing organic hydroxy compound catabolic process The chemical reactions and pathways resulting in the breakdown of organic hydroxy compound. NMDCO_relaxed.owl GO:0000278 biolink:NamedThing mitotic cell cycle Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent. NMDCO_relaxed.owl GO:0007049 biolink:NamedThing cell cycle The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. NMDCO_relaxed.owl GO:0051321 biolink:NamedThing meiotic cell cycle Progression through the phases of the meiotic cell cycle, in which canonically a cell replicates to produce four offspring with half the chromosomal content of the progenitor cell via two nuclear divisions. NMDCO_relaxed.owl GO:0000280 biolink:NamedThing nuclear division The division of a cell nucleus into two nuclei, with DNA and other nuclear contents distributed between the daughter nuclei. NMDCO_relaxed.owl GO:0048285 biolink:NamedThing organelle fission The creation of two or more organelles by division of one organelle. NMDCO_relaxed.owl GO:0140572 biolink:NamedThing vacuole fission The division of a vacuole within a cell to form two or more separate vacuoles. NMDCO_relaxed.owl GO:0000313 biolink:NamedThing organellar ribosome A ribosome contained within a subcellular membrane-bounded organelle. NMDCO_relaxed.owl GO:0000740 biolink:NamedThing nuclear membrane fusion The joining of 2 or more lipid bilayer membranes that surround the nucleus. NMDCO_relaxed.owl GO:0061025 biolink:NamedThing membrane fusion The membrane organization process that joins two lipid bilayers to form a single membrane. NMDCO_relaxed.owl GO:0036504 biolink:NamedThing Golgi membrane fusion The joining of two lipid bilayers that surround the Golgi apparatus to form a single Golgi membrane. NMDCO_relaxed.owl GO:0045026 biolink:NamedThing plasma membrane fusion The joining of the lipid bilayer membrane that surround a cell with that of another cell, producing a single cell. NMDCO_relaxed.owl GO:0090174 biolink:NamedThing organelle membrane fusion The joining of two lipid bilayers to form a single organelle membrane. NMDCO_relaxed.owl GO:0099500 biolink:NamedThing vesicle fusion to plasma membrane Fusion of the membrane of a vesicle with the plasma membrane, thereby releasing its contents into the extracellular space. NMDCO_relaxed.owl GO:0030264 biolink:NamedThing nuclear fragmentation involved in apoptotic nuclear change The breakdown of the nucleus into small membrane-bounded compartments, or blebs, each of which contain compacted DNA. NMDCO_relaxed.owl GO:0051081 biolink:NamedThing nuclear membrane disassembly The controlled breakdown of the nuclear membranes, for example during cellular division. NMDCO_relaxed.owl GO:0006906 biolink:NamedThing vesicle fusion Fusion of the membrane of a transport vesicle with its target membrane. NMDCO_relaxed.owl GO:0000741 biolink:NamedThing karyogamy The creation of a single nucleus from multiple nuclei as a result of fusing the lipid bilayers that surround each nuclei. NMDCO_relaxed.owl GO:1905690 biolink:NamedThing nucleus disassembly The disaggregation of a nucleus into its constituent components. NMDCO_relaxed.owl GO:0048284 biolink:NamedThing organelle fusion The creation of a single organelle from two or more organelles. NMDCO_relaxed.owl GO:0000768 biolink:NamedThing syncytium formation by plasma membrane fusion The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. NMDCO_relaxed.owl GO:0006949 biolink:NamedThing syncytium formation The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane. Syncytia are normally derived from single cells that fuse or fail to complete cell division. NMDCO_relaxed.owl GO:0140253 biolink:NamedThing cell-cell fusion A cellular process in which two or more cells combine together, their plasma membrane fusing, producing a single cell. In some cases, nuclei fuse, producing a polyploid cell, while in other cases, nuclei remain separate, producing a syncytium. NMDCO_relaxed.owl GO:0000785 biolink:NamedThing chromatin The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome. NMDCO_relaxed.owl GO:0032993 biolink:NamedThing protein-DNA complex A macromolecular complex containing both protein and DNA molecules. NMDCO_relaxed.owl GO:0000792 biolink:NamedThing heterochromatin A compact and highly condensed form of chromatin that is refractory to transcription. NMDCO_relaxed.owl GO:0030261 biolink:NamedThing chromosome condensation The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells. NMDCO_relaxed.owl GO:0070192 biolink:NamedThing chromosome organization involved in meiotic cell cycle A process of chromosome organization that is involved in a meiotic cell cycle. NMDCO_relaxed.owl GO:0000902 biolink:NamedThing cell morphogenesis The developmental process in which the size or shape of a cell is generated and organized. NMDCO_relaxed.owl GO:0009653 biolink:NamedThing anatomical structure morphogenesis The process in which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form. NMDCO_relaxed.owl GO:0001745 biolink:NamedThing compound eye morphogenesis The morphogenetic process in which the anatomical structures of the compound eye are generated and organized. The adult compound eye is a precise assembly of 700-800 ommatidia. Each ommatidium is composed of 20 cells, identified by cell type and position. An example of compound eye morphogenesis is found in Drosophila melanogaster. NMDCO_relaxed.owl GO:0001763 biolink:NamedThing morphogenesis of a branching structure The process in which the anatomical structures of branches are generated and organized. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes. NMDCO_relaxed.owl GO:0001831 biolink:NamedThing trophectodermal cellular morphogenesis The morphogenesis of trophectoderm cells. NMDCO_relaxed.owl GO:0001839 biolink:NamedThing neural plate morphogenesis The process in which the anatomical structures of the neural plate are generated and organized. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue. NMDCO_relaxed.owl GO:0001886 biolink:NamedThing endothelial cell morphogenesis The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell. NMDCO_relaxed.owl GO:0002009 biolink:NamedThing morphogenesis of an epithelium The process in which the anatomical structures of epithelia are generated and organized. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube. NMDCO_relaxed.owl GO:0002011 biolink:NamedThing morphogenesis of an epithelial sheet The process in which the anatomical structures of an epithelial sheet are generated and organized. An epithelial sheet is a flat surface consisting of closely packed epithelial cells. NMDCO_relaxed.owl GO:0002072 biolink:NamedThing optic cup morphogenesis involved in camera-type eye development The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina. An example of this process is found in Mus musculus. NMDCO_relaxed.owl GO:0002089 biolink:NamedThing lens morphogenesis in camera-type eye The process in which the anatomical structures of the lens are generated and organized. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus. NMDCO_relaxed.owl GO:0003007 biolink:NamedThing heart morphogenesis The developmental process in which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. NMDCO_relaxed.owl GO:0003142 biolink:NamedThing cardiogenic plate morphogenesis The process in which the anatomical structures of the cardiogenic plate are generated and organized. The cardiogenic plate is the first recognizable structure derived from the heart field. NMDCO_relaxed.owl GO:0003143 biolink:NamedThing embryonic heart tube morphogenesis The process in which the anatomical structures of the embryonic heart tube are generated and organized. The embryonic heart tube is an epithelial tube that will give rise to the mature heart. NMDCO_relaxed.owl GO:0003148 biolink:NamedThing outflow tract septum morphogenesis The process in which the anatomical structures of the outflow tract septum are generated and organized. The outflow tract septum is a partition in the outflow tract. NMDCO_relaxed.owl GO:0003149 biolink:NamedThing membranous septum morphogenesis The process in which the membranous septum is generated and organized. The membranous septum is the upper part of ventricular septum. NMDCO_relaxed.owl GO:0003150 biolink:NamedThing muscular septum morphogenesis The process in which the muscular septum is generated and organized. The muscular septum is the lower part of the ventricular septum. NMDCO_relaxed.owl GO:0003151 biolink:NamedThing outflow tract morphogenesis The process in which the anatomical structures of the outflow tract are generated and organized. The outflow tract is the portion of the heart through which blood flows into the arteries. NMDCO_relaxed.owl GO:0003159 biolink:NamedThing morphogenesis of an endothelium The process in which the anatomical structure of an endothelium is generated and organized. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells. NMDCO_relaxed.owl GO:0003160 biolink:NamedThing endocardium morphogenesis The process in which the anatomical structure of the endocardium is generated and organized. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. NMDCO_relaxed.owl GO:0003169 biolink:NamedThing coronary vein morphogenesis The process in which the anatomical structures of veins of the heart are generated and organized. NMDCO_relaxed.owl GO:0003203 biolink:NamedThing endocardial cushion morphogenesis The process in which the anatomical structure of the endocardial cushion is generated and organized. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. NMDCO_relaxed.owl GO:0003206 biolink:NamedThing cardiac chamber morphogenesis The process in which a cardiac chamber is generated and organized. A cardiac chamber is an enclosed cavity within the heart. NMDCO_relaxed.owl GO:0003208 biolink:NamedThing cardiac ventricle morphogenesis The process in which the cardiac ventricle is generated and organized. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart. NMDCO_relaxed.owl GO:0003209 biolink:NamedThing cardiac atrium morphogenesis The process in which the cardiac atrium is generated and organized. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle. NMDCO_relaxed.owl GO:0003212 biolink:NamedThing cardiac left atrium morphogenesis The process in which the left cardiac atrium is generated and organized. NMDCO_relaxed.owl GO:0003213 biolink:NamedThing cardiac right atrium morphogenesis The process in which the right cardiac atrium is generated and organized. NMDCO_relaxed.owl GO:0003214 biolink:NamedThing cardiac left ventricle morphogenesis The process in which the left cardiac ventricle is generated and organized. NMDCO_relaxed.owl GO:0003215 biolink:NamedThing cardiac right ventricle morphogenesis The process in which the right cardiac ventricle is generated and organized. NMDCO_relaxed.owl GO:0003220 biolink:NamedThing left ventricular cardiac muscle tissue morphogenesis The process in which the anatomical structures of left cardiac ventricle muscle are generated and organized. NMDCO_relaxed.owl GO:0003221 biolink:NamedThing right ventricular cardiac muscle tissue morphogenesis The process in which the anatomical structures of the right cardiac ventricle muscle are generated and organized. NMDCO_relaxed.owl GO:0003222 biolink:NamedThing ventricular trabecula myocardium morphogenesis The process in which the anatomical structures of the trabecular cardiac ventricle muscle are generated and organized. NMDCO_relaxed.owl GO:0003225 biolink:NamedThing left ventricular trabecular myocardium morphogenesis The process in which the anatomical structures of cardiac left ventricular trabecular myocardium are generated and organized. NMDCO_relaxed.owl GO:0003227 biolink:NamedThing right ventricular trabecular myocardium morphogenesis The process in which the anatomical structures of the right ventricular myocardium are generated and organized. NMDCO_relaxed.owl GO:0003236 biolink:NamedThing sinus venosus morphogenesis The process in which the sinus venosus is generated and organized. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart. NMDCO_relaxed.owl GO:0003314 biolink:NamedThing heart rudiment morphogenesis The process in which the anatomical structures of the heart rudiment are generated and organized. NMDCO_relaxed.owl GO:0003344 biolink:NamedThing pericardium morphogenesis The process in which the anatomical structure of the pericardium is generated and organized. NMDCO_relaxed.owl GO:0003382 biolink:NamedThing epithelial cell morphogenesis The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state. NMDCO_relaxed.owl GO:0003404 biolink:NamedThing optic vesicle morphogenesis The developmental process pertaining to the formation and shaping of the optic vesicle. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup. NMDCO_relaxed.owl GO:0007439 biolink:NamedThing ectodermal digestive tract development The process whose specific outcome is the progression of the ectodermal digestive tract over time, from its formation to the mature structure. The ectodermal digestive tract includes those portions that are derived from ectoderm. NMDCO_relaxed.owl GO:0007440 biolink:NamedThing foregut morphogenesis The process in which the anatomical structures of the foregut are generated and organized. NMDCO_relaxed.owl GO:0007442 biolink:NamedThing hindgut morphogenesis The process in which the anatomical structures of the hindgut are generated and organized. NMDCO_relaxed.owl GO:0008594 biolink:NamedThing photoreceptor cell morphogenesis The process in which the structures of a photoreceptor cell are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a photoreceptor cell, a sensory cell that reacts to the presence of light. An example of this is found in Drosophila melanogaster. NMDCO_relaxed.owl GO:0009887 biolink:NamedThing animal organ morphogenesis Morphogenesis of an animal organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. NMDCO_relaxed.owl GO:0010171 biolink:NamedThing body morphogenesis The process in which the anatomical structures of the soma are generated and organized. NMDCO_relaxed.owl GO:0021551 biolink:NamedThing central nervous system morphogenesis The process in which the anatomical structure of the central nervous system is generated and organized. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. NMDCO_relaxed.owl GO:0021555 biolink:NamedThing midbrain-hindbrain boundary morphogenesis The process in which the anatomical structure of the midbrain-hindbrain boundary is generated and organized. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate. NMDCO_relaxed.owl GO:0021575 biolink:NamedThing hindbrain morphogenesis The process in which the anatomical structure of the hindbrain is generated and organized. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions. NMDCO_relaxed.owl GO:0021579 biolink:NamedThing medulla oblongata morphogenesis The process in which the anatomical structure of the medulla oblongata is generated and organized. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. NMDCO_relaxed.owl GO:0021583 biolink:NamedThing pons morphogenesis The process in which the anatomical structure of the pons is generated and organized. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. NMDCO_relaxed.owl GO:0021593 biolink:NamedThing rhombomere morphogenesis The process in which the anatomical structure of the rhombomere is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. NMDCO_relaxed.owl GO:0021602 biolink:NamedThing cranial nerve morphogenesis The process in which the anatomical structure of the cranial nerves are generated and organized. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. NMDCO_relaxed.owl GO:0021636 biolink:NamedThing trigeminal nerve morphogenesis The process in which the anatomical structure of the trigeminal nerve is generated and organized. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. NMDCO_relaxed.owl GO:0021704 biolink:NamedThing locus ceruleus morphogenesis The process in which the anatomical structure of the locus ceruleus is generated and organized. In mice, the locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. NMDCO_relaxed.owl GO:0021719 biolink:NamedThing superior olivary nucleus morphogenesis The process in which the anatomical structure of the superior olivary nucleus is generated and organized. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. NMDCO_relaxed.owl GO:0022612 biolink:NamedThing gland morphogenesis The process in which the anatomical structures of a gland are generated and organized. NMDCO_relaxed.owl GO:0032989 biolink:NamedThing cellular anatomical entity morphogenesis The process in which a cellular entity is generated and organized. A cellular entity has granularity above the level of a protein complex but below that of an anatomical system. NMDCO_relaxed.owl GO:0035107 biolink:NamedThing appendage morphogenesis The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch. NMDCO_relaxed.owl GO:0035112 biolink:NamedThing genitalia morphogenesis The process in which the anatomical structures of genitalia are generated and organized. The genitalia are the organs of reproduction or generation, external and internal. NMDCO_relaxed.owl GO:0035239 biolink:NamedThing tube morphogenesis The process in which the anatomical structures of a tube are generated and organized. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system. NMDCO_relaxed.owl GO:0035260 biolink:NamedThing internal genitalia morphogenesis The process in which the anatomical structures of the internal genitalia are generated and organized. The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals. NMDCO_relaxed.owl GO:0035261 biolink:NamedThing external genitalia morphogenesis The process in which the anatomical structures of the external genitalia are generated and organized. The external genitalia are the outer sex organs, such as the penis or vulva in mammals. NMDCO_relaxed.owl GO:0035262 biolink:NamedThing gonad morphogenesis The process in which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals. NMDCO_relaxed.owl GO:0035909 biolink:NamedThing aorta morphogenesis The process in which the anatomical structures of an aorta are generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body. NMDCO_relaxed.owl GO:0035910 biolink:NamedThing ascending aorta morphogenesis The process in which the anatomical structures of the ascending aorta are generated and organized. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once. NMDCO_relaxed.owl GO:0035911 biolink:NamedThing descending aorta morphogenesis The process in which the anatomical structures of the descending aorta are generated and organized. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once. NMDCO_relaxed.owl GO:0035912 biolink:NamedThing dorsal aorta morphogenesis The process in which the anatomical structures of the dorsal aorta are generated and organized. The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once. NMDCO_relaxed.owl GO:0036342 biolink:NamedThing post-anal tail morphogenesis The process in which a post-anal tail is generated and organized. A post-anal tail is a muscular region of the body that extends posterior to the anus. The post-anal tail may aid locomotion and balance. NMDCO_relaxed.owl GO:0043589 biolink:NamedThing skin morphogenesis The process in which the anatomical structures of the skin are generated and organized. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue. NMDCO_relaxed.owl GO:0048319 biolink:NamedThing axial mesoderm morphogenesis The process in which the anatomical structures of the axial mesoderm are generated and organized. NMDCO_relaxed.owl GO:0048332 biolink:NamedThing mesoderm morphogenesis The process in which the anatomical structures of the mesoderm are generated and organized. NMDCO_relaxed.owl GO:0048340 biolink:NamedThing paraxial mesoderm morphogenesis The process in which the anatomical structures of the paraxial mesoderm are generated and organized. NMDCO_relaxed.owl GO:0048369 biolink:NamedThing lateral mesoderm morphogenesis The process in which the anatomical structures of the lateral mesoderm are generated and organized. NMDCO_relaxed.owl GO:0048390 biolink:NamedThing intermediate mesoderm morphogenesis The process in which the anatomical structures of the intermediate mesoderm are generated and organized. NMDCO_relaxed.owl GO:0048514 biolink:NamedThing blood vessel morphogenesis The process in which the anatomical structures of blood vessels are generated and organized. The blood vessel is the vasculature carrying blood. NMDCO_relaxed.owl GO:0048546 biolink:NamedThing digestive tract morphogenesis The process in which the anatomical structures of the digestive tract are generated and organized. The digestive tract is the anatomical structure through which food passes and is processed. NMDCO_relaxed.owl GO:0048570 biolink:NamedThing notochord morphogenesis The process in which the anatomical structures of the notochord are generated and organized. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column. NMDCO_relaxed.owl GO:0048592 biolink:NamedThing eye morphogenesis The process in which the anatomical structures of the eye are generated and organized. NMDCO_relaxed.owl GO:0048593 biolink:NamedThing camera-type eye morphogenesis The process in which the anatomical structures of the eye are generated and organized. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field. NMDCO_relaxed.owl GO:0048598 biolink:NamedThing embryonic morphogenesis The process in which anatomical structures are generated and organized during the embryonic phase. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants. NMDCO_relaxed.owl GO:0048601 biolink:NamedThing oocyte morphogenesis The process in which the structures of an oocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of an oocyte. NMDCO_relaxed.owl GO:0048644 biolink:NamedThing muscle organ morphogenesis The process in which the anatomical structures of muscle are generated and organized. NMDCO_relaxed.owl GO:0048705 biolink:NamedThing skeletal system morphogenesis The process in which the anatomical structures of the skeleton are generated and organized. NMDCO_relaxed.owl GO:0048729 biolink:NamedThing tissue morphogenesis The process in which the anatomical structures of a tissue are generated and organized. NMDCO_relaxed.owl GO:0048730 biolink:NamedThing epidermis morphogenesis The process in which the anatomical structures of the epidermis are generated and organized. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species. NMDCO_relaxed.owl GO:0048812 biolink:NamedThing neuron projection morphogenesis The process in which the anatomical structures of a neuron projection are generated and organized. A neuron projection is any process extending from a neural cell, such as axons or dendrites. NMDCO_relaxed.owl GO:0048844 biolink:NamedThing artery morphogenesis The process in which the anatomical structures of arterial blood vessels are generated and organized. Arteries are blood vessels that transport blood from the heart to the body and its organs. NMDCO_relaxed.owl GO:0048845 biolink:NamedThing venous blood vessel morphogenesis The process in which the anatomical structures of venous blood vessels are generated and organized. Veins are blood vessels that transport blood from the body and its organs to the heart. NMDCO_relaxed.owl GO:0048854 biolink:NamedThing brain morphogenesis The process in which the anatomical structures of the brain are generated and organized. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.). NMDCO_relaxed.owl GO:0048858 biolink:NamedThing cell projection morphogenesis The process in which the anatomical structures of a cell projection are generated and organized. NMDCO_relaxed.owl GO:0055008 biolink:NamedThing cardiac muscle tissue morphogenesis The process in which the anatomical structures of cardiac muscle tissue are generated and organized. NMDCO_relaxed.owl GO:0055009 biolink:NamedThing atrial cardiac muscle tissue morphogenesis The process in which the anatomical structure of cardiac atrium muscle is generated and organized. NMDCO_relaxed.owl GO:0055010 biolink:NamedThing ventricular cardiac muscle tissue morphogenesis The process in which the anatomical structures of cardiac ventricle muscle is generated and organized. NMDCO_relaxed.owl GO:0060042 biolink:NamedThing retina morphogenesis in camera-type eye The process in which the anatomical structure of the retina is generated and organized. NMDCO_relaxed.owl GO:0060323 biolink:NamedThing head morphogenesis The process in which the anatomical structures of the head are generated and organized. The head is the anterior-most division of the body. NMDCO_relaxed.owl GO:0060325 biolink:NamedThing face morphogenesis The process in which the anatomical structures of the face are generated and organized. The face is the ventral division of the head. NMDCO_relaxed.owl GO:0060349 biolink:NamedThing bone morphogenesis The process in which bones are generated and organized. NMDCO_relaxed.owl GO:0060411 biolink:NamedThing cardiac septum morphogenesis The process in which the anatomical structure of a cardiac septum is generated and organized. A cardiac septum is a partition that separates parts of the heart. NMDCO_relaxed.owl GO:0060412 biolink:NamedThing ventricular septum morphogenesis The developmental process in which a ventricular septum is generated and organized. A ventricular septum is an anatomical structure that separates the lower chambers (ventricles) of the heart from one another. NMDCO_relaxed.owl GO:0060413 biolink:NamedThing atrial septum morphogenesis The developmental process in which atrial septum is generated and organized. The atrial septum separates the upper chambers (the atria) of the heart from one another. NMDCO_relaxed.owl GO:0060414 biolink:NamedThing aorta smooth muscle tissue morphogenesis The process in which the structure of the smooth muscle tissue surrounding the aorta is generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body. NMDCO_relaxed.owl GO:0060425 biolink:NamedThing lung morphogenesis The process in which the anatomical structures of the lung are generated and organized. NMDCO_relaxed.owl GO:0060439 biolink:NamedThing trachea morphogenesis The process in which a trachea is generated and organized. The trachea is the portion of the airway that attaches to the bronchi as it branches. NMDCO_relaxed.owl GO:0060460 biolink:NamedThing left lung morphogenesis The process in which anatomical structures of the left lung are generated and organized. NMDCO_relaxed.owl GO:0060461 biolink:NamedThing right lung morphogenesis The process in which anatomical structures of the right lung are generated and organized. NMDCO_relaxed.owl GO:0060463 biolink:NamedThing lung lobe morphogenesis The process in which the anatomical structures of a lung lobe are generated and organized. A lung lobe is a projection that extends from the lung. NMDCO_relaxed.owl GO:0060536 biolink:NamedThing cartilage morphogenesis The process in which the anatomical structures of cartilage are generated and organized. NMDCO_relaxed.owl GO:0060540 biolink:NamedThing diaphragm morphogenesis The process in which the anatomical structures of the diaphragm are generated and organized. NMDCO_relaxed.owl GO:0060562 biolink:NamedThing epithelial tube morphogenesis The process in which the anatomical structures of a tube are generated and organized from an epithelium. Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system. NMDCO_relaxed.owl GO:0060571 biolink:NamedThing morphogenesis of an epithelial fold The morphogenetic process in which an epithelial sheet bends along a linear axis. NMDCO_relaxed.owl GO:0060572 biolink:NamedThing morphogenesis of an epithelial bud The morphogenetic process in which a bud forms from an epithelial sheet. A bud is a protrusion that forms form the sheet by localized folding. NMDCO_relaxed.owl GO:0060577 biolink:NamedThing pulmonary vein morphogenesis The process in which the anatomical structure of the pulmonary venous blood vessels are generated and organized. Pulmonary veins are blood vessels that transport blood from the lungs to the heart. NMDCO_relaxed.owl GO:0060578 biolink:NamedThing superior vena cava morphogenesis The process in which the anatomical structure of superior vena cava generated and organized. The superior vena cava is a blood vessel that transports blood from the upper body to the heart. NMDCO_relaxed.owl GO:0060977 biolink:NamedThing coronary vasculature morphogenesis The process in which the anatomical structures of blood vessels of the heart are generated and organized. The blood vessel is the vasculature carrying blood. NMDCO_relaxed.owl GO:0061040 biolink:NamedThing female gonad morphogenesis The process in which a female gonad is generated and organized. NMDCO_relaxed.owl GO:0061072 biolink:NamedThing iris morphogenesis The process in which the iris is generated and organized. The iris is an anatomical structure in the eye whose opening forms the pupil. The iris is responsible for controlling the diameter and size of the pupil and the amount of light reaching the retina. NMDCO_relaxed.owl GO:0061073 biolink:NamedThing ciliary body morphogenesis The process in which the ciliary body generated and organized. The ciliary body is the circumferential tissue inside the eye composed of the ciliary muscle and ciliary processes. NMDCO_relaxed.owl GO:0061113 biolink:NamedThing pancreas morphogenesis Morphogenesis of the pancreas. Morphogenesis is the process in which anatomical structures are generated and organized. NMDCO_relaxed.owl GO:0061154 biolink:NamedThing endothelial tube morphogenesis The process in which the anatomical structures of a tube are generated and organized from an endothelium. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells. NMDCO_relaxed.owl GO:0061155 biolink:NamedThing pulmonary artery endothelial tube morphogenesis The process in which the anatomical structures of a tube are generated and organized from the pulmonary artery endothelium. An pulmonary artery endothelium is an epithelium that lines the pulmonary artery. NMDCO_relaxed.owl GO:0061156 biolink:NamedThing pulmonary artery morphogenesis The process in which the anatomical structures of the pulmonary artery are generated and organized. The pulmonary artery is the artery that carries blood from the heart to the lungs. NMDCO_relaxed.owl GO:0061299 biolink:NamedThing retina vasculature morphogenesis in camera-type eye The process in which the vasculature of the retina is generated and organized. NMDCO_relaxed.owl GO:0061304 biolink:NamedThing retinal blood vessel morphogenesis The process whose specific outcome is the progression of a blood vessel of the retina over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0061383 biolink:NamedThing trabecula morphogenesis The process of shaping a trabecula in an organ. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue. NMDCO_relaxed.owl GO:0061384 biolink:NamedThing heart trabecula morphogenesis The process of shaping a trabecula in the heart. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue. NMDCO_relaxed.owl GO:0061552 biolink:NamedThing ganglion morphogenesis The process in which the anatomical structures of ganglion are generated and organized. NMDCO_relaxed.owl GO:0061556 biolink:NamedThing trigeminal ganglion morphogenesis The process in which the anatomical structure of a trigeminal ganglion is generated and organized. NMDCO_relaxed.owl GO:0061559 biolink:NamedThing cranial ganglion morphogenesis The process in which the anatomical structure of a cranial ganglion is generated and organized. NMDCO_relaxed.owl GO:0061626 biolink:NamedThing pharyngeal arch artery morphogenesis The process in which the anatomical structures of a pharyngeal arch artery is generated and organized. The pharyngeal arch arteries are a series of six paired embryological vascular structures, the development of which give rise to several major arteries, such as the stapedial artery, the middle meningeal artery, the internal carotid artery and the pulmonary artery. NMDCO_relaxed.owl GO:0071697 biolink:NamedThing ectodermal placode morphogenesis The process in which the anatomical structures of an ectodermal placode are generated and organized. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm. NMDCO_relaxed.owl GO:0072132 biolink:NamedThing mesenchyme morphogenesis The process in which the anatomical structures of a mesenchymal tissue are generated and organized. A mesenchymal tissue is made up of loosely packed stellate cells. NMDCO_relaxed.owl GO:0072576 biolink:NamedThing liver morphogenesis The process in which the anatomical structures of the liver are generated and organized. NMDCO_relaxed.owl GO:0090171 biolink:NamedThing chondrocyte morphogenesis The process in which the structures of a chondrocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a chondrocyte. NMDCO_relaxed.owl GO:0090596 biolink:NamedThing sensory organ morphogenesis Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or set of tissues that work together to receive and transmit signals from external or internal stimuli. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. NMDCO_relaxed.owl GO:0120039 biolink:NamedThing plasma membrane bounded cell projection morphogenesis The process in which the anatomical structures of a plasma membrane bounded cell projection are generated and organized. NMDCO_relaxed.owl GO:1904693 biolink:NamedThing midbrain morphogenesis The developmental process by which a midbrain is generated and organized. NMDCO_relaxed.owl GO:1904770 biolink:NamedThing intramembranous bone morphogenesis The developmental process by which an intramembranous bone is generated and organized. NMDCO_relaxed.owl GO:1905223 biolink:NamedThing epicardium morphogenesis The developmental process by which an epicardium is generated and organized. NMDCO_relaxed.owl GO:0001101 biolink:NamedThing response to acid chemical Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form. NMDCO_relaxed.owl GO:0042221 biolink:NamedThing response to chemical Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus. NMDCO_relaxed.owl GO:0009636 biolink:NamedThing response to toxic substance Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus. NMDCO_relaxed.owl GO:0010033 biolink:NamedThing response to organic substance Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus. NMDCO_relaxed.owl GO:0010035 biolink:NamedThing response to inorganic substance Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inorganic substance stimulus. NMDCO_relaxed.owl GO:0032868 biolink:NamedThing response to insulin Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms. NMDCO_relaxed.owl GO:1901698 biolink:NamedThing response to nitrogen compound Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus. NMDCO_relaxed.owl GO:1901700 biolink:NamedThing response to oxygen-containing compound Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen-containing compound stimulus. NMDCO_relaxed.owl GO:1902074 biolink:NamedThing response to salt Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salt stimulus. NMDCO_relaxed.owl GO:0001501 biolink:NamedThing skeletal system development The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton). NMDCO_relaxed.owl GO:0048731 biolink:NamedThing system development The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. NMDCO_relaxed.owl GO:0001655 biolink:NamedThing urogenital system development The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0001944 biolink:NamedThing vasculature development The process whose specific outcome is the progression of the vasculature over time, from its formation to the mature structure. The vasculature is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the organism. NMDCO_relaxed.owl GO:0002520 biolink:NamedThing immune system development The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. NMDCO_relaxed.owl GO:0007399 biolink:NamedThing nervous system development The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state. NMDCO_relaxed.owl GO:0007417 biolink:NamedThing central nervous system development The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. NMDCO_relaxed.owl GO:0007422 biolink:NamedThing peripheral nervous system development The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands. NMDCO_relaxed.owl GO:0035270 biolink:NamedThing endocrine system development Progression of the endocrine system over time, from its formation to a mature structure. The endocrine system is a system of hormones and ductless glands, where the glands release hormones directly into the blood, lymph or other intercellular fluid, and the hormones circulate within the body to affect distant organs. The major glands that make up the human endocrine system are the hypothalamus, pituitary, thyroid, parathryoids, adrenals, pineal body, and the reproductive glands which include the ovaries and testes. NMDCO_relaxed.owl GO:0035272 biolink:NamedThing exocrine system development Progression of the exocrine system over time, from its formation to a mature structure. The exocrine system is a system of hormones and glands, where the glands secrete straight to a target site via ducts or tubes. The human exocrine system includes the salivary glands, sweat glands and many glands of the digestive system. NMDCO_relaxed.owl GO:0048483 biolink:NamedThing autonomic nervous system development The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands. NMDCO_relaxed.owl GO:0048485 biolink:NamedThing sympathetic nervous system development The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter. NMDCO_relaxed.owl GO:0048880 biolink:NamedThing sensory system development The process whose specific outcome is the progression of a sensory system over time from its formation to the mature structure. NMDCO_relaxed.owl GO:0055123 biolink:NamedThing digestive system development The process whose specific outcome is the progression of the digestive system over time, from its formation to the mature structure. The digestive system is the entire structure in which digestion takes place. Digestion is all of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. NMDCO_relaxed.owl GO:0060037 biolink:NamedThing pharyngeal system development The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear. NMDCO_relaxed.owl GO:0060541 biolink:NamedThing respiratory system development The progression of the respiratory system over time from its formation to its mature structure. The respiratory system carries out respiratory gaseous exchange. NMDCO_relaxed.owl GO:0061008 biolink:NamedThing hepaticobiliary system development The progression of the hepaticobiliary system over time, from its formation to the mature structure. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins. NMDCO_relaxed.owl GO:0061458 biolink:NamedThing reproductive system development The progression of the reproductive system over time from its formation to the mature structure. The reproductive system consists of the organs that function in reproduction. NMDCO_relaxed.owl GO:0072001 biolink:NamedThing renal system development The process whose specific outcome is the progression of the renal system over time, from its formation to the mature structure. The renal system maintains fluid balance and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels. NMDCO_relaxed.owl GO:0072359 biolink:NamedThing circulatory system development The process whose specific outcome is the progression of the circulatory system over time, from its formation to the mature structure. The circulatory system is the organ system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells, etc. to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis. NMDCO_relaxed.owl GO:0048856 biolink:NamedThing anatomical structure development The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome. NMDCO_relaxed.owl GO:0001568 biolink:NamedThing blood vessel development The process whose specific outcome is the progression of a blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood. NMDCO_relaxed.owl GO:0001654 biolink:NamedThing eye development The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight. NMDCO_relaxed.owl GO:0001824 biolink:NamedThing blastocyst development The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm. NMDCO_relaxed.owl GO:0001840 biolink:NamedThing neural plate development The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system. NMDCO_relaxed.owl GO:0001889 biolink:NamedThing liver development The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes. NMDCO_relaxed.owl GO:0002088 biolink:NamedThing lens development in camera-type eye The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus. NMDCO_relaxed.owl GO:0002119 biolink:NamedThing nematode larval development The process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew. NMDCO_relaxed.owl GO:0002932 biolink:NamedThing tendon sheath development The process whose specific outcome is the progression of a tendon sheath over time, from its formation to the mature structure. A tendon sheath is a layer of membrane around a tendon. It permits the tendon to move. NMDCO_relaxed.owl GO:0003157 biolink:NamedThing endocardium development The process whose specific outcome is the progression of the endocardium over time, from its formation to the mature structure. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. NMDCO_relaxed.owl GO:0003158 biolink:NamedThing endothelium development The process whose specific outcome is the progression of an endothelium over time, from its formation to the mature structure. Endothelium refers to the layer of cells lining blood vessels, lymphatics, the heart, and serous cavities, and is derived from bone marrow or mesoderm. Corneal endothelium is a special case, derived from neural crest cells. NMDCO_relaxed.owl GO:0003161 biolink:NamedThing cardiac conduction system development The process whose specific outcome is the progression of the cardiac conduction system over time, from its formation to the mature structure. The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat. NMDCO_relaxed.owl GO:0003162 biolink:NamedThing atrioventricular node development The process whose specific outcome is the progression of the atrioventricular (AV) node over time, from its formation to the mature structure. The AV node is part of the cardiac conduction system that controls the timing of ventricle contraction by receiving electrical signals from the sinoatrial (SA) node and relaying them to the His-Purkinje system. NMDCO_relaxed.owl GO:0003163 biolink:NamedThing sinoatrial node development The process whose specific outcome is the progression of the sinoatrial (SA) node over time, from its formation to the mature structure. The SA node is part of the cardiac conduction system that controls the timing of heart muscle contraction. It relays electrical signals to the AV node. NMDCO_relaxed.owl GO:0003164 biolink:NamedThing His-Purkinje system development The process whose specific outcome is the progression of the His-Purkinje system over time, from its formation to the mature structure. The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles. NMDCO_relaxed.owl GO:0003165 biolink:NamedThing Purkinje myocyte development The process whose specific outcome is the progression of a Purkinje myocyte over time, from its formation to the mature structure. The Purkinje myocyte (also known as cardiac Purkinje fiber) is part of the cardiac conduction system that receives signals from the bundle of His and innervates the ventricular cardiac muscle. NMDCO_relaxed.owl GO:0003197 biolink:NamedThing endocardial cushion development The progression of a cardiac cushion over time, from its initial formation to the mature structure. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. NMDCO_relaxed.owl GO:0003204 biolink:NamedThing cardiac skeleton development The progression of the cardiac skeleton over time, from its formation to the mature structure. The cardiac skeleton is a specialized extracellular matrix that separates the atria from the ventricles and provides physical support for the heart. NMDCO_relaxed.owl GO:0003205 biolink:NamedThing cardiac chamber development The progression of a cardiac chamber over time, from its formation to the mature structure. A cardiac chamber is an enclosed cavity within the heart. NMDCO_relaxed.owl GO:0003228 biolink:NamedThing atrial cardiac muscle tissue development The process whose specific outcome is the progression of cardiac muscle of the atrium over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0003229 biolink:NamedThing ventricular cardiac muscle tissue development The process whose specific outcome is the progression of ventricular cardiac muscle over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0003230 biolink:NamedThing cardiac atrium development The process whose specific outcome is the progression of a cardiac atrium over time, from its formation to the mature structure. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle. NMDCO_relaxed.owl GO:0003231 biolink:NamedThing cardiac ventricle development The process whose specific outcome is the progression of a cardiac ventricle over time, from its formation to the mature structure. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart. NMDCO_relaxed.owl GO:0003235 biolink:NamedThing sinus venosus development The progression of the sinus venosus over time, from its formation to the mature structure. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart. NMDCO_relaxed.owl GO:0003279 biolink:NamedThing cardiac septum development The progression of a cardiac septum over time, from its initial formation to the mature structure. NMDCO_relaxed.owl GO:0003281 biolink:NamedThing ventricular septum development The progression of the ventricular septum over time from its formation to the mature structure. NMDCO_relaxed.owl GO:0003283 biolink:NamedThing atrial septum development The progression of the atrial septum over time, from its initial formation to the mature structure. NMDCO_relaxed.owl GO:0003313 biolink:NamedThing heart rudiment development The progression of the heart rudiment over time, from its initial formation to the mature structure. The heart rudiment is a cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube. NMDCO_relaxed.owl GO:0003342 biolink:NamedThing proepicardium development The progression of the proepicardium from its formation to the mature structure. The proepicardium is an outpouching of the septum transversum. NMDCO_relaxed.owl GO:0003343 biolink:NamedThing septum transversum development The progression of the septum transversum from its initial formation to the mature structure. The septum transversum is a portion of the trunk mesenchyme. NMDCO_relaxed.owl GO:0003360 biolink:NamedThing brainstem development The progression of the brainstem from its formation to the mature structure. The brainstem is the part of the brain that connects the brain with the spinal cord. NMDCO_relaxed.owl GO:0003407 biolink:NamedThing neural retina development The progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. NMDCO_relaxed.owl GO:0007275 biolink:NamedThing multicellular organism development The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). NMDCO_relaxed.owl GO:0007398 biolink:NamedThing ectoderm development The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation. NMDCO_relaxed.owl GO:0007420 biolink:NamedThing brain development The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.). NMDCO_relaxed.owl GO:0007423 biolink:NamedThing sensory organ development The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0007492 biolink:NamedThing endoderm development The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues. NMDCO_relaxed.owl GO:0007494 biolink:NamedThing midgut development The process whose specific outcome is the progression of the midgut over time, from its formation to the mature structure. The midgut is the middle part of the alimentary canal from the stomach, or entrance of the bile duct, to, or including, the large intestine. NMDCO_relaxed.owl GO:0007498 biolink:NamedThing mesoderm development The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue. NMDCO_relaxed.owl GO:0007506 biolink:NamedThing gonadal mesoderm development The process whose specific outcome is the progression of the gonadal mesoderm over time, from its formation to the mature structure. The gonadal mesoderm is the middle layer of the three primary germ layers of the embryo which will go on to form the gonads of the organism. NMDCO_relaxed.owl GO:0007507 biolink:NamedThing heart development The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. NMDCO_relaxed.owl GO:0007517 biolink:NamedThing muscle organ development The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work. NMDCO_relaxed.owl GO:0007519 biolink:NamedThing skeletal muscle tissue development The developmental sequence of events leading to the formation of adult skeletal muscle tissue. The main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers. NMDCO_relaxed.owl GO:0008406 biolink:NamedThing gonad development The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones. NMDCO_relaxed.owl GO:0008585 biolink:NamedThing female gonad development The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0009790 biolink:NamedThing embryo development The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant. NMDCO_relaxed.owl GO:0009888 biolink:NamedThing tissue development The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0014706 biolink:NamedThing striated muscle tissue development The process whose specific outcome is the progression of a striated muscle over time, from its formation to the mature structure. Striated muscle contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. Skeletal muscle myoblasts fuse to form myotubes and eventually multinucleated muscle fibers. The fusion of cardiac cells is very rare and can only form binucleate cells. NMDCO_relaxed.owl GO:0021510 biolink:NamedThing spinal cord development The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues. NMDCO_relaxed.owl GO:0021517 biolink:NamedThing ventral spinal cord development The process whose specific outcome is the progression of the ventral region of the spinal cord over time, from its formation to the mature structure. The neurons of the ventral region of the mature spinal cord participate in motor output. NMDCO_relaxed.owl GO:0021545 biolink:NamedThing cranial nerve development The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. NMDCO_relaxed.owl GO:0021546 biolink:NamedThing rhombomere development The process whose specific outcome is the progression of the rhombomere over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. NMDCO_relaxed.owl GO:0021548 biolink:NamedThing pons development The process whose specific outcome is the progression of the pons over time, from its formation to the mature structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. NMDCO_relaxed.owl GO:0021550 biolink:NamedThing medulla oblongata development The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. NMDCO_relaxed.owl GO:0021559 biolink:NamedThing trigeminal nerve development The process whose specific outcome is the progression of the trigeminal nerve over time, from its formation to the mature structure. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. NMDCO_relaxed.owl GO:0021675 biolink:NamedThing nerve development The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0021703 biolink:NamedThing locus ceruleus development The process whose specific outcome is the progression of the locus ceruleus over time, from its formation to the mature structure. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. NMDCO_relaxed.owl GO:0021718 biolink:NamedThing superior olivary nucleus development The process whose specific outcome is the progression of the superior olivary nucleus over time, from its formation to the mature structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. NMDCO_relaxed.owl GO:0021751 biolink:NamedThing salivary nucleus development The process whose specific outcome is the progression of a salivary nucleus over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0021753 biolink:NamedThing superior salivary nucleus development The process whose specific outcome is the progression of the superior salivary nucleus over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0021915 biolink:NamedThing neural tube development The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium. NMDCO_relaxed.owl GO:0022037 biolink:NamedThing metencephalon development The process whose specific outcome is the progression of the metencephalon over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0030323 biolink:NamedThing respiratory tube development The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract. NMDCO_relaxed.owl GO:0030324 biolink:NamedThing lung development The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax. NMDCO_relaxed.owl GO:0030901 biolink:NamedThing midbrain development The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles). NMDCO_relaxed.owl GO:0030902 biolink:NamedThing hindbrain development The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium). NMDCO_relaxed.owl GO:0030903 biolink:NamedThing notochord development The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column. NMDCO_relaxed.owl GO:0030917 biolink:NamedThing midbrain-hindbrain boundary development The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. NMDCO_relaxed.owl GO:0031016 biolink:NamedThing pancreas development The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating hormones. NMDCO_relaxed.owl GO:0031017 biolink:NamedThing exocrine pancreas development The process whose specific outcome is the progression of the exocrine pancreas over time, from its formation to the mature structure. The exocrine pancreas produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells. NMDCO_relaxed.owl GO:0031018 biolink:NamedThing endocrine pancreas development The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin. NMDCO_relaxed.owl GO:0035050 biolink:NamedThing embryonic heart tube development The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure. The heart tube forms as the heart rudiment from the heart field. NMDCO_relaxed.owl GO:0035295 biolink:NamedThing tube development The process whose specific outcome is the progression of a tube over time, from its initial formation to a mature structure. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues including lung and trachea, kidney, the mammary gland, the vascular system and the gastrointestinal and urinary-genital tracts. NMDCO_relaxed.owl GO:0035622 biolink:NamedThing intrahepatic bile duct development The progression of the intrahepatic bile ducts over time, from their formation to the mature structure. Intrahepatic bile ducts (bile ducts within the liver) collect bile from bile canaliculi in the liver, and connect to the extrahepatic bile ducts (bile ducts outside the liver). NMDCO_relaxed.owl GO:0035628 biolink:NamedThing cystic duct development The progression of the cystic duct over time, from its formation to the mature structure. The cystic duct runs from the gallbladder to the common bile duct. NMDCO_relaxed.owl GO:0035844 biolink:NamedThing cloaca development The process whose specific outcome is the progression of the cloaca over time, from it's formation to the mature structure. The cloaca is the common chamber into which intestinal, genital and urinary canals open in vertebrates. NMDCO_relaxed.owl GO:0035855 biolink:NamedThing megakaryocyte development The process whose specific outcome is the progression of a megakaryocyte cell over time, from its formation to the mature structure. Megakaryocyte development does not include the steps involved in committing a cell to a megakaryocyte fate. A megakaryocyte is a giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow. NMDCO_relaxed.owl GO:0035904 biolink:NamedThing aorta development The progression of the aorta over time, from its initial formation to the mature structure. An aorta is an artery that carries blood from the heart to other parts of the body. NMDCO_relaxed.owl GO:0035905 biolink:NamedThing ascending aorta development The progression of the ascending aorta over time, from its initial formation to the mature structure. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once. NMDCO_relaxed.owl GO:0035906 biolink:NamedThing descending aorta development The progression of the descending aorta over time, from its initial formation to the mature structure. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once. NMDCO_relaxed.owl GO:0035907 biolink:NamedThing dorsal aorta development The progression of the dorsal aorta over time, from its initial formation to the mature structure. The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once. NMDCO_relaxed.owl GO:0035989 biolink:NamedThing tendon development The process whose specific outcome is the progression of a tendon over time, from its formation to the mature structure. A tendon is a fibrous, strong, connective tissue that connects muscle to bone or integument and is capable of withstanding tension. Tendons and muscles work together to exert a pulling force. NMDCO_relaxed.owl GO:0043010 biolink:NamedThing camera-type eye development The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field. NMDCO_relaxed.owl GO:0043588 biolink:NamedThing skin development The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue. NMDCO_relaxed.owl GO:0048318 biolink:NamedThing axial mesoderm development The process whose specific outcome is the progression of the axial mesoderm over time, from its formation to the mature structure. The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord. NMDCO_relaxed.owl GO:0048339 biolink:NamedThing paraxial mesoderm development The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube. NMDCO_relaxed.owl GO:0048368 biolink:NamedThing lateral mesoderm development The process whose specific outcome is the progression of the lateral mesoderm over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0048389 biolink:NamedThing intermediate mesoderm development The process whose specific outcome is the progression of the intermediate mesoderm over time, from its formation to the mature structure. The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads. NMDCO_relaxed.owl GO:0048513 biolink:NamedThing animal organ development Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. NMDCO_relaxed.owl GO:0048536 biolink:NamedThing spleen development The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions. NMDCO_relaxed.owl GO:0048539 biolink:NamedThing bone marrow development The process whose specific outcome is the progression of the bone marrow over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0048565 biolink:NamedThing digestive tract development The process whose specific outcome is the progression of the digestive tract over time, from its formation to the mature structure. The digestive tract is the anatomical structure through which food passes and is processed. NMDCO_relaxed.owl GO:0048568 biolink:NamedThing embryonic organ development Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. NMDCO_relaxed.owl GO:0048608 biolink:NamedThing reproductive structure development The reproductive developmental process whose specific outcome is the progression of somatic structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures. NMDCO_relaxed.owl GO:0048732 biolink:NamedThing gland development The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion. NMDCO_relaxed.owl GO:0048736 biolink:NamedThing appendage development The process whose specific outcome is the progression of an appendage over time, from its formation to the mature structure. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch. NMDCO_relaxed.owl GO:0048738 biolink:NamedThing cardiac muscle tissue development The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0048741 biolink:NamedThing skeletal muscle fiber development The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. NMDCO_relaxed.owl GO:0048745 biolink:NamedThing smooth muscle tissue development The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0048749 biolink:NamedThing compound eye development The process whose specific outcome is the progression of the compound eye over time, from its formation to the mature structure. The compound eye is an organ of sight that contains multiple repeating units, often arranged hexagonally. Each unit has its own lens and photoreceptor cell(s) and can generate either a single pixelated image or multiple images, per eye. NMDCO_relaxed.owl GO:0048857 biolink:NamedThing neural nucleus development The biological process whose specific outcome is the progression of a neural nucleus from its initial condition to its mature state. A neural nucleus is an anatomical structure consisting of a discrete aggregate of neuronal soma. NMDCO_relaxed.owl GO:0051216 biolink:NamedThing cartilage development The process whose specific outcome is the progression of a cartilage element over time, from its formation to the mature structure. Cartilage elements are skeletal elements that consist of connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. NMDCO_relaxed.owl GO:0060021 biolink:NamedThing roof of mouth development The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities. NMDCO_relaxed.owl GO:0060039 biolink:NamedThing pericardium development The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery. NMDCO_relaxed.owl GO:0060041 biolink:NamedThing retina development in camera-type eye The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates. NMDCO_relaxed.owl GO:0060173 biolink:NamedThing limb development The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin. NMDCO_relaxed.owl GO:0060322 biolink:NamedThing head development The biological process whose specific outcome is the progression of a head from an initial condition to its mature state. The head is the anterior-most division of the body. NMDCO_relaxed.owl GO:0060324 biolink:NamedThing face development The biological process whose specific outcome is the progression of a face from an initial condition to its mature state. The face is the ventral division of the head. NMDCO_relaxed.owl GO:0060426 biolink:NamedThing lung vasculature development The biological process whose specific outcome is the progression of a lung vasculature from an initial condition to its mature state. This process begins with the formation of the lung vasculature and ends with the mature structure. The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs. NMDCO_relaxed.owl GO:0060427 biolink:NamedThing lung connective tissue development The biological process whose specific outcome is the progression of lung connective tissue from an initial condition to its mature state. This process begins with the formation of lung connective tissue and ends with the mature structure. The lung connective tissue is a material made up of fibers forming a framework and support structure for the lungs. NMDCO_relaxed.owl GO:0060428 biolink:NamedThing lung epithelium development The biological process whose specific outcome is the progression of the lung epithelium from an initial condition to its mature state. This process begins with the formation of lung epithelium and ends with the mature structure. The lung epithelium is the specialized epithelium that lines the inside of the lung. NMDCO_relaxed.owl GO:0060429 biolink:NamedThing epithelium development The process whose specific outcome is the progression of an epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. NMDCO_relaxed.owl GO:0060438 biolink:NamedThing trachea development The process whose specific outcome is the progression of a trachea over time, from its formation to the mature structure. The trachea is the portion of the airway that attaches to the bronchi as it branches. NMDCO_relaxed.owl GO:0060458 biolink:NamedThing right lung development The biological process whose specific outcome is the progression of a right lung from an initial condition to its mature state. This process begins with the formation of the right lung and ends with the mature structure. The right lung is the lung which is on the right side of the anterior posterior axis looking from a dorsal to ventral aspect. NMDCO_relaxed.owl GO:0060459 biolink:NamedThing left lung development The biological process whose specific outcome is the progression of a left lung from an initial condition to its mature state. This process begins with the formation of the left lung and ends with the mature structure. The left lung is the lung which is on the left side of the anterior posterior axis looking from a dorsal to ventral aspect. NMDCO_relaxed.owl GO:0060462 biolink:NamedThing lung lobe development The biological process whose specific outcome is the progression of a lung lobe from an initial condition to its mature state. This process begins with the formation of a lung lobe by branching morphogenesis and ends with the mature structure. A lung lobe is one of the rounded projections that compose the lung. NMDCO_relaxed.owl GO:0060465 biolink:NamedThing pharynx development The biological process whose specific outcome is the progression of a pharynx from an initial condition to its mature state. The pharynx is the part of the digestive system immediately posterior to the mouth. NMDCO_relaxed.owl GO:0060485 biolink:NamedThing mesenchyme development The process whose specific outcome is the progression of a mesenchymal tissue over time, from its formation to the mature structure. A mesenchymal tissue is made up of loosely packed stellate cells. NMDCO_relaxed.owl GO:0060537 biolink:NamedThing muscle tissue development The progression of muscle tissue over time, from its initial formation to its mature state. Muscle tissue is a contractile tissue made up of actin and myosin fibers. NMDCO_relaxed.owl GO:0060538 biolink:NamedThing skeletal muscle organ development The progression of a skeletal muscle organ over time from its initial formation to its mature state. A skeletal muscle organ includes the skeletal muscle tissue and its associated connective tissue. NMDCO_relaxed.owl GO:0060539 biolink:NamedThing diaphragm development The progression of the diaphragm over time from its initial formation to the mature structure. The diaphragm is a skeletal muscle that is responsible for contraction and expansion of the lungs. NMDCO_relaxed.owl GO:0060576 biolink:NamedThing intestinal epithelial cell development The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell of the intestine over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0060612 biolink:NamedThing adipose tissue development The process whose specific outcome is the progression of adipose tissue over time, from its formation to the mature structure. Adipose tissue is specialized tissue that is used to store fat. NMDCO_relaxed.owl GO:0060840 biolink:NamedThing artery development The progression of the artery over time, from its initial formation to the mature structure. An artery is a blood vessel that carries blood away from the heart to a capillary bed. NMDCO_relaxed.owl GO:0060841 biolink:NamedThing venous blood vessel development The progression of the venous blood vessel over time from its initial formation to the mature structure. Venous blood vessels carry blood back to the heart after the capillary bed. NMDCO_relaxed.owl GO:0060926 biolink:NamedThing cardiac pacemaker cell development The process whose specific outcome is the progression of a pacemaker cell over time, from its formation to the mature state. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions. NMDCO_relaxed.owl GO:0060958 biolink:NamedThing endocardial cell development The progression of an endocardial cell over time, from its formation to the mature cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. NMDCO_relaxed.owl GO:0060976 biolink:NamedThing coronary vasculature development The process whose specific outcome is the progression of the blood vessels of the heart over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0061009 biolink:NamedThing common bile duct development The progression of the common bile duct over time, from its formation to the mature structure. The common bile duct is formed from the joining of the common hepatic duct running from the liver, and the cystic duct running from the gallbladder. The common bile duct transports bile from the liver and gallbladder to the intestine. NMDCO_relaxed.owl GO:0061010 biolink:NamedThing gallbladder development The progression of the gallbladder over time, from its initial formation to the mature structure. The gallbladder is a cavitated organ that stores bile. NMDCO_relaxed.owl GO:0061011 biolink:NamedThing hepatic duct development The progression of the hepatic duct over time, from its formation to the mature structure. The hepatic duct is the duct that leads from the liver to the common bile duct. NMDCO_relaxed.owl GO:0061032 biolink:NamedThing visceral serous pericardium development The progression of the visceral serous pericardium from its formation to the mature structure. The visceral serous pericardium is the inner layer of the pericardium. NMDCO_relaxed.owl GO:0061053 biolink:NamedThing somite development The progression of a somite from its initial formation to the mature structure. Somites are mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo. NMDCO_relaxed.owl GO:0061054 biolink:NamedThing dermatome development The progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. NMDCO_relaxed.owl GO:0061055 biolink:NamedThing myotome development The progression of the myotome over time, from its formation to the mature structure. The myotome is the portion of the somite that will give rise to muscle. NMDCO_relaxed.owl GO:0061056 biolink:NamedThing sclerotome development The progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra. NMDCO_relaxed.owl GO:0061061 biolink:NamedThing muscle structure development The progression of a muscle structure over time, from its formation to its mature state. Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms. NMDCO_relaxed.owl GO:0061080 biolink:NamedThing right horn of sinus venosus development The progression of the right horn of the sinus venosus from its formation to the mature structure. NMDCO_relaxed.owl GO:0061147 biolink:NamedThing endocardial endothelium development The progression of the endocardial endothelium over time, from its initial formation to the mature structure. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. NMDCO_relaxed.owl GO:0061298 biolink:NamedThing retina vasculature development in camera-type eye The process whose specific outcome is the progression of the vasculature of the retina over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0061303 biolink:NamedThing cornea development in camera-type eye The progression of the cornea over time, from its formation to the mature structure. The cornea is the transparent structure that covers the anterior of the eye. NMDCO_relaxed.owl GO:0061448 biolink:NamedThing connective tissue development The progression of a connective tissue over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0061525 biolink:NamedThing hindgut development The process whose specific outcome is the progression of the hindgut over time, from its formation to the mature structure. The hindgut is part of the alimentary canal that lies posterior to the midgut. NMDCO_relaxed.owl GO:0061548 biolink:NamedThing ganglion development The process whose specific outcome is the progression of a ganglion over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0061549 biolink:NamedThing sympathetic ganglion development The process whose specific outcome is the progression of a sympathetic ganglion over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0061550 biolink:NamedThing cranial ganglion development The process whose specific outcome is the progression of a cranial ganglion over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0061551 biolink:NamedThing trigeminal ganglion development The process whose specific outcome is the progression of a trigeminal ganglion over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0062094 biolink:NamedThing stomach development The process whose specific outcome is the progression of the stomach over time, from its formation to the mature structure. The stomach is an expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. NMDCO_relaxed.owl GO:0071696 biolink:NamedThing ectodermal placode development The progression of an ectodermal placode over time from its initial formation until its mature state. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm. NMDCO_relaxed.owl GO:0072360 biolink:NamedThing vascular cord development The progression of the vascular cord over time from its initial formation until its mature state. The vascular cord is the primordial vasculature that will develop into blood vessels by the process of tubulogenesis. NMDCO_relaxed.owl GO:0097084 biolink:NamedThing vascular associated smooth muscle cell development The process aimed at the progression of a vascular smooth muscle cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels. NMDCO_relaxed.owl GO:0098773 biolink:NamedThing skin epidermis development The process whose specific outcome is the progression of the skin epidermis over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0160038 biolink:NamedThing somatic sensory system development The process whose specific outcome is the progression of a somatic sensory system over time from its formation to the mature structure. Somatic sensory system is the sensory system for the sense of touch and pain. NMDCO_relaxed.owl GO:0160093 biolink:NamedThing chordate pharynx development The process whose specific outcome is the progression of cordate pharynx over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:1903700 biolink:NamedThing caecum development The process whose specific outcome is the progression of a caecum over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:1903701 biolink:NamedThing substantia propria of cornea development The process whose specific outcome is the progression of a substantia propria of cornea over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:1903702 biolink:NamedThing esophagus development The process whose specific outcome is the progression of an esophagus over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:1903867 biolink:NamedThing extraembryonic membrane development The process whose specific outcome is the progression of an extraembryonic membrane over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:1904484 biolink:NamedThing cloacal gland development The process whose specific outcome is the progression of a cloacal gland over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:1904817 biolink:NamedThing serous membrane development The process whose specific outcome is the progression of a serous membrane over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:1904818 biolink:NamedThing visceral peritoneum development The process whose specific outcome is the progression of a visceral peritoneum over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:1904819 biolink:NamedThing parietal peritoneum development The process whose specific outcome is the progression of a parietal peritoneum over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:1904820 biolink:NamedThing peritoneum development The process whose specific outcome is the progression of a peritoneum over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:1904888 biolink:NamedThing cranial skeletal system development The process whose specific outcome is the progression of a cranial skeletal system over time, from its formation to the mature structure. The cranial skeletal system is the skeletal subdivision of the head, and includes the skull (cranium plus mandible), pharyngeal and/or hyoid apparatus. NMDCO_relaxed.owl GO:0001503 biolink:NamedThing ossification The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance. NMDCO_relaxed.owl GO:0003008 biolink:NamedThing system process A multicellular organismal process carried out by any of the organs or tissues in an organ system. An organ system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a biological objective. NMDCO_relaxed.owl GO:0007389 biolink:NamedThing pattern specification process Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate. NMDCO_relaxed.owl GO:0007585 biolink:NamedThing respiratory gaseous exchange by respiratory system The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. NMDCO_relaxed.owl GO:0007586 biolink:NamedThing digestion The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. NMDCO_relaxed.owl GO:0007610 biolink:NamedThing behavior The internally coordinated responses (actions or inactions) of animals (individuals or groups) to internal or external stimuli, via a mechanism that involves nervous system activity. NMDCO_relaxed.owl GO:0009791 biolink:NamedThing post-embryonic development The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development. NMDCO_relaxed.owl GO:0032504 biolink:NamedThing multicellular organism reproduction The biological process in which new individuals are produced by one or two multicellular organisms. The new individuals inherit some proportion of their genetic material from the parent or parents. NMDCO_relaxed.owl GO:0032941 biolink:NamedThing secretion by tissue The controlled release of a substance by a tissue. NMDCO_relaxed.owl GO:0035264 biolink:NamedThing multicellular organism growth The increase in size or mass of an entire multicellular organism, as opposed to cell growth. NMDCO_relaxed.owl GO:0035265 biolink:NamedThing organ growth The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function. NMDCO_relaxed.owl GO:0048871 biolink:NamedThing multicellular organismal-level homeostasis Any process involved in the maintenance of an internal steady state at the level of the multicellular organism. NMDCO_relaxed.owl GO:0050879 biolink:NamedThing multicellular organismal movement Any physiological process involved in changing the position of a multicellular organism or an anatomical part of a multicellular organism. NMDCO_relaxed.owl GO:0001508 biolink:NamedThing action potential A process in which membrane potential cycles through a depolarizing spike, triggered in response to depolarization above some threshold, followed by repolarization. This cycle is driven by the flow of ions through various voltage gated channels with different thresholds and ion specificities. NMDCO_relaxed.owl GO:0016057 biolink:NamedThing regulation of membrane potential in photoreceptor cell Hyperpolarization (vertebrates) or depolarization (invertebrates) of the photoreceptor cell membrane via closing/opening of cation specific channels as a result of signals generated by rhodopsin activation by a photon. NMDCO_relaxed.owl GO:0001525 biolink:NamedThing angiogenesis Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels. NMDCO_relaxed.owl GO:0048646 biolink:NamedThing anatomical structure formation involved in morphogenesis The developmental process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome. NMDCO_relaxed.owl GO:0001704 biolink:NamedThing formation of primary germ layer The formation of the ectoderm, mesoderm and endoderm during gastrulation. NMDCO_relaxed.owl GO:0001705 biolink:NamedThing ectoderm formation The formation of ectoderm during gastrulation. NMDCO_relaxed.owl GO:0001706 biolink:NamedThing endoderm formation The formation of the endoderm during gastrulation. NMDCO_relaxed.owl GO:0001707 biolink:NamedThing mesoderm formation The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts. NMDCO_relaxed.owl GO:0001743 biolink:NamedThing lens placode formation The initial developmental process that will lead to the formation of an eye. NMDCO_relaxed.owl GO:0001756 biolink:NamedThing somitogenesis The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo. NMDCO_relaxed.owl GO:0001825 biolink:NamedThing blastocyst formation The initial formation of a blastocyst from a solid ball of cells known as a morula. NMDCO_relaxed.owl GO:0001841 biolink:NamedThing neural tube formation The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system. NMDCO_relaxed.owl GO:0001842 biolink:NamedThing neural fold formation The process in which the neural fold is formed. The edges of the neural plate thicken and move up to form a U-shaped structure called the neural groove. NMDCO_relaxed.owl GO:0003144 biolink:NamedThing embryonic heart tube formation The process that gives rise to the embryonic heart tube. This process pertains to the initial formation of a structure from unspecified parts. The embryonic heart tube is an epithelial tube that will give rise to the mature heart. NMDCO_relaxed.owl GO:0003207 biolink:NamedThing cardiac chamber formation The developmental process pertaining to the initial formation of a cardiac chamber from unspecified parts. A cardiac chamber is an enclosed cavity within the heart. NMDCO_relaxed.owl GO:0003210 biolink:NamedThing cardiac atrium formation The developmental process pertaining to the initial formation of a cardiac atrium from unspecified parts. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle. NMDCO_relaxed.owl GO:0003211 biolink:NamedThing cardiac ventricle formation The developmental process pertaining to the initial formation of a cardiac ventricle from unspecified parts. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart. NMDCO_relaxed.owl GO:0003216 biolink:NamedThing cardiac left atrium formation The developmental process pertaining to the initial formation of a left cardiac atrium from unspecified parts. NMDCO_relaxed.owl GO:0003217 biolink:NamedThing cardiac right atrium formation The developmental process pertaining to the initial formation of a cardiac right atrium from unspecified parts. NMDCO_relaxed.owl GO:0003218 biolink:NamedThing cardiac left ventricle formation The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts. NMDCO_relaxed.owl GO:0003219 biolink:NamedThing cardiac right ventricle formation The developmental process pertaining to the initial formation of a right cardiac ventricle from unspecified parts. NMDCO_relaxed.owl GO:0003237 biolink:NamedThing sinus venosus formation The developmental process pertaining to the initial formation of the sinus venosus from unspecified parts. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart. NMDCO_relaxed.owl GO:0003272 biolink:NamedThing endocardial cushion formation The developmental process pertaining to the initial formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. NMDCO_relaxed.owl GO:0003315 biolink:NamedThing heart rudiment formation The developmental process pertaining to the initial formation of the heart rudiment. NMDCO_relaxed.owl GO:0003403 biolink:NamedThing optic vesicle formation The developmental process pertaining to the initial formation of the optic vesicle from the lateral wall of the forebrain. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup. NMDCO_relaxed.owl GO:0007293 biolink:NamedThing germarium-derived egg chamber formation Construction of a stage-1 egg chamber in the anterior part of the germarium, from the progeny of germ-line and somatic stem cells. An example of this is found in Drosophila melanogaster. NMDCO_relaxed.owl GO:0010842 biolink:NamedThing retina layer formation The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia. NMDCO_relaxed.owl GO:0010927 biolink:NamedThing cellular component assembly involved in morphogenesis The cellular component assembly that is part of the initial shaping of the component during its developmental progression. NMDCO_relaxed.owl GO:0014023 biolink:NamedThing neural rod formation The formation of a solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts. NMDCO_relaxed.owl GO:0014025 biolink:NamedThing neural keel formation The formation of a thickened region of the neurectoderm that is roughly triangular in cross section. The neural keel develops from the neural plate and develops into the neural rod. Neural keel formation occurs during primary neurulation in teleosts. NMDCO_relaxed.owl GO:0014028 biolink:NamedThing notochord formation The formation of the notochord from the chordamesoderm. The notochord is composed of large cells packed within a firm connective tissue sheath and is found in all chordates at the ventral surface of the neural tube. In vertebrates, the notochord contributes to the vertebral column. NMDCO_relaxed.owl GO:0014029 biolink:NamedThing neural crest formation The formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation procedes. NMDCO_relaxed.owl GO:0021501 biolink:NamedThing prechordal plate formation The formation of the prechordal plate. The prechordal plate is a thickening of the endoderm at the cranial end of the primitive streak formed by the involution of Spemann's organizer cells. The prechordal plate and the notochord induce the formation of the neural plate from the overlying ectodermal cells. NMDCO_relaxed.owl GO:0021547 biolink:NamedThing midbrain-hindbrain boundary initiation The regionalization process that gives rise to the midbrain-hindbrain boundary. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate. NMDCO_relaxed.owl GO:0021556 biolink:NamedThing central nervous system formation The process that gives rise to the central nervous system. This process pertains to the initial formation of a structure from unspecified parts. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. NMDCO_relaxed.owl GO:0021576 biolink:NamedThing hindbrain formation The process that gives rise to the hindbrain. This process pertains to the initial formation of a structure from unspecified parts. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions. NMDCO_relaxed.owl GO:0021580 biolink:NamedThing medulla oblongata formation The process that gives rise to the medulla oblongata. This process pertains to the initial formation of a structure from unspecified parts. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. NMDCO_relaxed.owl GO:0021584 biolink:NamedThing pons formation The process that gives rise to the pons. This process pertains to the initial formation of a structure from unspecified parts. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. NMDCO_relaxed.owl GO:0021594 biolink:NamedThing rhombomere formation The process that gives rise to the rhombomere. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. NMDCO_relaxed.owl GO:0021603 biolink:NamedThing cranial nerve formation The process that gives rise to the cranial nerves. This process pertains to the initial formation of a structure from unspecified parts. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. NMDCO_relaxed.owl GO:0021638 biolink:NamedThing trigeminal nerve formation The process that gives rise to the trigeminal nerve. This process pertains to the initial formation of a structure from unspecified parts. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. NMDCO_relaxed.owl GO:0021654 biolink:NamedThing rhombomere boundary formation The process that gives rise to a rhombomere boundary. This process pertains to the initial formation of a boundary delimiting a rhombomere. Rhombomeres are transverse segments of the developing rhombencephalon that are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order. NMDCO_relaxed.owl GO:0021705 biolink:NamedThing locus ceruleus formation The process that gives rise to the locus ceruleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. NMDCO_relaxed.owl GO:0021720 biolink:NamedThing superior olivary nucleus formation The process that gives rise to the superior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. NMDCO_relaxed.owl GO:0021906 biolink:NamedThing hindbrain-spinal cord boundary formation The process whose specific outcome is the formation of the hindbrain-spinal cord boundary. NMDCO_relaxed.owl GO:0021990 biolink:NamedThing neural plate formation The formation of the flat, thickened layer of ectodermal cells known as the neural plate. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system. NMDCO_relaxed.owl GO:0035148 biolink:NamedThing tube formation Creation of the central hole of a tube in an anatomical structure through which gases and/or liquids flow. NMDCO_relaxed.owl GO:0035992 biolink:NamedThing tendon formation The process that gives rise to a tendon. This process pertains to the initial formation of a tendon from unspecified parts. NMDCO_relaxed.owl GO:0048320 biolink:NamedThing axial mesoderm formation The process that gives rise to the axial mesoderm. This process pertains to the initial formation of the structure from unspecified parts. NMDCO_relaxed.owl GO:0048341 biolink:NamedThing paraxial mesoderm formation The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts. NMDCO_relaxed.owl GO:0048370 biolink:NamedThing lateral mesoderm formation The process that gives rise to the lateral mesoderm. This process pertains to the initial formation of the structure from unspecified parts. NMDCO_relaxed.owl GO:0048391 biolink:NamedThing intermediate mesoderm formation The process that gives rise to the intermediate mesoderm. This process pertains to the initial formation of the structure from unspecified parts. NMDCO_relaxed.owl GO:0048645 biolink:NamedThing animal organ formation The process pertaining to the initial formation of an animal organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ. NMDCO_relaxed.owl GO:0048859 biolink:NamedThing formation of anatomical boundary The process in which the limits of an anatomical structure are generated. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome. NMDCO_relaxed.owl GO:0060214 biolink:NamedThing endocardium formation Formation of the endocardium of the heart. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. NMDCO_relaxed.owl GO:0060343 biolink:NamedThing trabecula formation The process of creating a trabecula in an organ. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue. NMDCO_relaxed.owl GO:0060344 biolink:NamedThing liver trabecula formation The process of creating a trabecula in the liver. A trabecula is a tissue element in the form of a small beam, strut or rod. NMDCO_relaxed.owl GO:0060345 biolink:NamedThing spleen trabecula formation The process of creating a trabecula in the spleen. A trabecula is a tissue element in the form of a small beam, strut or rod. NMDCO_relaxed.owl GO:0060347 biolink:NamedThing heart trabecula formation The process of creating a trabecula in the heart. A trabecula is a tissue element in the form of a small beam, strut or rod. NMDCO_relaxed.owl GO:0060431 biolink:NamedThing primary lung bud formation The morphogenetic process in which the foregut region specified to become the lung forms the initial left and right buds. NMDCO_relaxed.owl GO:0060440 biolink:NamedThing trachea formation The process pertaining to the initial formation of a trachea from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the trachea is recognizable. The trachea is the portion of the airway that attaches to the bronchi as it branches. NMDCO_relaxed.owl GO:0060464 biolink:NamedThing lung lobe formation The developmental process pertaining to the initial formation of a lung lobe from unspecified parts. This process begins with the specific processes that contribute to the appearance of the lobe and ends when the structural rudiment is recognizable. A lung lobe is a projection that extends from the lung. NMDCO_relaxed.owl GO:0060788 biolink:NamedThing ectodermal placode formation The developmental process in which an ectodermal placode forms. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm. NMDCO_relaxed.owl GO:0060900 biolink:NamedThing embryonic camera-type eye formation The developmental process pertaining to the initial formation of a camera-type eye from unspecified neurectoderm. This process begins with the differentiation of cells that form the optic field and ends when the optic cup has attained its shape. NMDCO_relaxed.owl GO:0060914 biolink:NamedThing heart formation The developmental process pertaining to the initial formation of the heart from unspecified parts. This process begins with the specific processes that contribute to the appearance of the heart field and the arrival of cardiac neural crest to the heart region. The process ends when the structural rudiment is recognizable. NMDCO_relaxed.owl GO:0061130 biolink:NamedThing pancreatic bud formation The morphogenetic process in which the foregut region specified to become the pancreas forms a bud. NMDCO_relaxed.owl GO:0061554 biolink:NamedThing ganglion formation The process that gives rise to ganglion. This process pertains to the initial formation of a structure from unspecified parts. NMDCO_relaxed.owl GO:0061560 biolink:NamedThing cranial ganglion formation The process that gives rise to a cranial ganglion. This process pertains to the initial formation of a structure from unspecified parts. NMDCO_relaxed.owl GO:0061561 biolink:NamedThing trigeminal ganglion formation The process that gives rise to the trigeminal ganglion. This process pertains to the initial formation of a structure from unspecified parts. NMDCO_relaxed.owl GO:1905139 biolink:NamedThing apical ectodermal ridge formation The process that gives rise to the apical ectodermal ridge. This process pertains to the initial formation of a structure from unspecified parts. NMDCO_relaxed.owl GO:0001555 biolink:NamedThing oocyte growth The developmental growth process in which an oocyte irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present. NMDCO_relaxed.owl GO:0003006 biolink:NamedThing developmental process involved in reproduction A developmental process in which a progressive change in the state of some part of an organism, germline or somatic, specifically contributes to its ability to form offspring. NMDCO_relaxed.owl GO:0001556 biolink:NamedThing oocyte maturation A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization. NMDCO_relaxed.owl GO:0007281 biolink:NamedThing germ cell development The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism. NMDCO_relaxed.owl GO:0007308 biolink:NamedThing oocyte construction The synthesis, deposition, and organization of the materials in a cell of an ovary; where the cell can then undergo meiosis and form an ovum. An example of this is found in Drosophila melanogaster. NMDCO_relaxed.owl GO:0007548 biolink:NamedThing sex differentiation The establishment of the sex of an organism by physical differentiation. NMDCO_relaxed.owl GO:0009994 biolink:NamedThing oocyte differentiation The process in which a relatively unspecialized immature germ cell acquires the specialized features of a mature female gamete. NMDCO_relaxed.owl GO:0035234 biolink:NamedThing ectopic germ cell programmed cell death Programmed cell death of an errant germ line cell that is outside the normal migratory path or ectopic to the gonad. This is an important mechanism of regulating germ cell survival within the embryo. NMDCO_relaxed.owl GO:0045137 biolink:NamedThing development of primary sexual characteristics The process whose specific outcome is the progression of the primary sexual characteristics over time, from their formation to the mature structures. The primary sexual characteristics are the testes in males and the ovaries in females and they develop in response to sex hormone secretion. NMDCO_relaxed.owl GO:0022412 biolink:NamedThing cellular process involved in reproduction in multicellular organism A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular organism. NMDCO_relaxed.owl GO:0007143 biolink:NamedThing female meiotic nuclear division A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the female germline. NMDCO_relaxed.owl GO:0030720 biolink:NamedThing oocyte localization involved in germarium-derived egg chamber formation Directed movement of the oocyte, following its specification, from its original central position in the cyst to a posterior position relative to the nurse cells of the egg chamber, and its maintenance in this posterior location. This is the first sign of anterior-posterior asymmetry in the developing egg chamber. NMDCO_relaxed.owl GO:0036093 biolink:NamedThing germ cell proliferation The multiplication or reproduction of germ cells, reproductive cells in multicellular organisms, resulting in the expansion of a cell population. NMDCO_relaxed.owl GO:0042078 biolink:NamedThing germ-line stem cell division The self-renewing division of a germline stem cell to produce a daughter stem cell and a daughter germ cell, which will divide to form the gametes. NMDCO_relaxed.owl GO:1903537 biolink:NamedThing meiotic cell cycle process involved in oocyte maturation Any meiotic cell cycle process that is involved in oocyte maturation. NMDCO_relaxed.owl GO:0001832 biolink:NamedThing blastocyst growth An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation. NMDCO_relaxed.owl GO:0003241 biolink:NamedThing growth involved in heart morphogenesis Developmental growth that contributes to the shaping of the heart. NMDCO_relaxed.owl GO:0016049 biolink:NamedThing cell growth The process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present. NMDCO_relaxed.owl GO:0042065 biolink:NamedThing glial cell growth Growth of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system. NMDCO_relaxed.owl GO:0048589 biolink:NamedThing developmental growth The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another. NMDCO_relaxed.owl GO:0048588 biolink:NamedThing developmental cell growth The growth of a cell, where growth contributes to the progression of the cell over time from one condition to another. NMDCO_relaxed.owl GO:0061049 biolink:NamedThing cell growth involved in cardiac muscle cell development The growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. NMDCO_relaxed.owl GO:0021700 biolink:NamedThing developmental maturation A developmental process, independent of morphogenetic (shape) change, that is required for an anatomical structure, cell or cellular component to attain its fully functional state. NMDCO_relaxed.owl GO:0001955 biolink:NamedThing blood vessel maturation A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state. NMDCO_relaxed.owl GO:0002069 biolink:NamedThing columnar/cuboidal epithelial cell maturation The developmental process, independent of morphogenetic (shape) change, that is required for a columna/cuboidal epithelial cell to attain its fully functional state. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. NMDCO_relaxed.owl GO:0002070 biolink:NamedThing epithelial cell maturation The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface. NMDCO_relaxed.owl GO:0002071 biolink:NamedThing glandular epithelial cell maturation The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland. NMDCO_relaxed.owl GO:0021578 biolink:NamedThing hindbrain maturation A developmental process, independent of morphogenetic (shape) change, that is required for the hindbrain to attain its fully functional state. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions. NMDCO_relaxed.owl GO:0021582 biolink:NamedThing medulla oblongata maturation A developmental process, independent of morphogenetic (shape) change, that is required for the medulla oblongata to attain its fully functional state. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate. NMDCO_relaxed.owl GO:0021586 biolink:NamedThing pons maturation A developmental process, independent of morphogenetic (shape) change, that is required for the pons to attain its fully functional state. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum. NMDCO_relaxed.owl GO:0021605 biolink:NamedThing cranial nerve maturation A developmental process, independent of morphogenetic (shape) change, that is required for a cranial nerve to attain its fully functional state. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions. NMDCO_relaxed.owl GO:0021626 biolink:NamedThing central nervous system maturation A developmental process, independent of morphogenetic (shape) change, that is required for the central nervous system to attain its fully functional state. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord. NMDCO_relaxed.owl GO:0021635 biolink:NamedThing trigeminal nerve maturation A developmental process, independent of morphogenetic (shape) change, that is required for the trigeminal nerve to attain its fully functional state. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae. NMDCO_relaxed.owl GO:0021682 biolink:NamedThing nerve maturation A developmental process, independent of morphogenetic (shape) change, that is required for a nerve to attain its fully functional state. NMDCO_relaxed.owl GO:0021706 biolink:NamedThing locus ceruleus maturation A developmental process, independent of morphogenetic (shape) change, that is required for the locus ceruleus to attain its fully functional state. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic. NMDCO_relaxed.owl GO:0021722 biolink:NamedThing superior olivary nucleus maturation A developmental process, independent of morphogenetic (shape) change, that is required for the superior olivary nucleus to attain its fully functional state. The superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound. NMDCO_relaxed.owl GO:0021732 biolink:NamedThing midbrain-hindbrain boundary maturation A developmental process, independent of morphogenetic (shape) change, that is required for the midbrain-hindbrain boundary to attain its fully functional state. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate. NMDCO_relaxed.owl GO:0042551 biolink:NamedThing neuron maturation A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state. NMDCO_relaxed.owl GO:0043249 biolink:NamedThing erythrocyte maturation A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state. NMDCO_relaxed.owl GO:0043354 biolink:NamedThing enucleate erythrocyte maturation A developmental process, independent of morphogenetic (shape) change, that is required for an enucleate erythrocyte to attain its fully functional state. An enucleate erythrocyte is an erythrocyte without a nucleus. NMDCO_relaxed.owl GO:0043362 biolink:NamedThing nucleate erythrocyte maturation A developmental process, independent of morphogenetic (shape) change, that is required for a nucleate erythrocyte to attain its fully functional state. A nucleate erythrocyte is an erythrocyte with a nucleus. NMDCO_relaxed.owl GO:0048469 biolink:NamedThing cell maturation The cellular developmental process, independent of morphogenetic (shape) change, that is required for a specific cell to attain its fully functional state. NMDCO_relaxed.owl GO:0048628 biolink:NamedThing myoblast maturation A developmental process, independent of morphogenetic (shape) change, that is required for a myoblast to attain its fully functional state. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. NMDCO_relaxed.owl GO:0048799 biolink:NamedThing animal organ maturation A developmental process, independent of morphogenetic (shape) change, that is required for an animal organ to attain its fully functional state. An organ is a tissue or set of tissues that work together to perform a specific function or functions. NMDCO_relaxed.owl GO:0060574 biolink:NamedThing intestinal epithelial cell maturation The developmental process, independent of morphogenetic (shape) change, that is required for a columna/cuboidal epithelial cell of the intestine to attain its fully functional state. A columnar/cuboidal epithelial cell of the intestine mature as they migrate from the intestinal crypt to the villus. NMDCO_relaxed.owl GO:0061792 biolink:NamedThing secretory granule maturation Steps required to transform an immature secretory vesicle into a mature secretory vesicle. Typically proceeds through homotypic membrane fusion and membrane remodeling. NMDCO_relaxed.owl GO:0070977 biolink:NamedThing bone maturation A developmental process, independent of morphogenetic (shape) change, that is required for bone to attain its fully functional state. NMDCO_relaxed.owl GO:0071695 biolink:NamedThing anatomical structure maturation A developmental process, independent of morphogenetic (shape) change, that is required for an anatomical structure to attain its fully functional state. NMDCO_relaxed.owl GO:0072560 biolink:NamedThing type B pancreatic cell maturation A developmental process, independent of morphogenetic (shape) change, that is required for a type B pancreatic cell to attain its fully functional state. A type B pancreatic cell is a cell located towards center of the islets of Langerhans that secretes insulin. NMDCO_relaxed.owl GO:1990502 biolink:NamedThing dense core granule maturation Steps required to transform a dense core granule generated at the trans-Golgi network into a fully formed and transmissible dense core granule. Dense core granule maturation proceeds through clathrin-mediated membrane remodeling events and is essential for efficient processing of cargo within dense core granules as well as for removing factors that might otherwise interfere with dense core granule trafficking and exocytosis. NMDCO_relaxed.owl GO:0001558 biolink:NamedThing regulation of cell growth Any process that modulates the frequency, rate, extent or direction of cell growth. NMDCO_relaxed.owl GO:0040008 biolink:NamedThing regulation of growth Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development. NMDCO_relaxed.owl GO:0045926 biolink:NamedThing negative regulation of growth Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism. NMDCO_relaxed.owl GO:0045927 biolink:NamedThing positive regulation of growth Any process that activates or increases the rate or extent of growth, the increase in size or mass of all or part of an organism. NMDCO_relaxed.owl GO:0048638 biolink:NamedThing regulation of developmental growth Any process that modulates the frequency, rate or extent of developmental growth. NMDCO_relaxed.owl GO:0051128 biolink:NamedThing regulation of cellular component organization Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. NMDCO_relaxed.owl GO:0010549 biolink:NamedThing regulation of membrane disassembly Any process that modulates the frequency, rate or extent of membrane disassembly. NMDCO_relaxed.owl GO:0031344 biolink:NamedThing regulation of cell projection organization Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections. NMDCO_relaxed.owl GO:0033043 biolink:NamedThing regulation of organelle organization Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle. NMDCO_relaxed.owl GO:0043244 biolink:NamedThing regulation of protein-containing complex disassembly Any process that modulates the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components. NMDCO_relaxed.owl GO:0043254 biolink:NamedThing regulation of protein-containing complex assembly Any process that modulates the frequency, rate or extent of protein complex assembly. NMDCO_relaxed.owl GO:0050807 biolink:NamedThing regulation of synapse organization Any process that modulates the physical form of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell). NMDCO_relaxed.owl GO:0051129 biolink:NamedThing negative regulation of cellular component organization Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. NMDCO_relaxed.owl GO:0051130 biolink:NamedThing positive regulation of cellular component organization Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. NMDCO_relaxed.owl GO:0060142 biolink:NamedThing regulation of syncytium formation by plasma membrane fusion Any process that modulates the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. NMDCO_relaxed.owl GO:1901888 biolink:NamedThing regulation of cell junction assembly Any process that modulates the frequency, rate or extent of cell junction assembly. NMDCO_relaxed.owl GO:1902275 biolink:NamedThing regulation of chromatin organization Any process that modulates the frequency, rate or extent of chromatin organization. NMDCO_relaxed.owl GO:1902903 biolink:NamedThing regulation of supramolecular fiber organization Any process that modulates the frequency, rate or extent of supramolecular fiber organization. NMDCO_relaxed.owl GO:1903053 biolink:NamedThing regulation of extracellular matrix organization Any process that modulates the frequency, rate or extent of extracellular matrix organization. NMDCO_relaxed.owl GO:1903729 biolink:NamedThing regulation of plasma membrane organization Any process that modulates the frequency, rate or extent of plasma membrane organization. NMDCO_relaxed.owl GO:0001936 biolink:NamedThing regulation of endothelial cell proliferation Any process that modulates the frequency, rate, or extent of endothelial cell proliferation. NMDCO_relaxed.owl GO:0001937 biolink:NamedThing negative regulation of endothelial cell proliferation Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation. NMDCO_relaxed.owl GO:0001938 biolink:NamedThing positive regulation of endothelial cell proliferation Any process that activates or increases the rate or extent of endothelial cell proliferation. NMDCO_relaxed.owl GO:0001956 biolink:NamedThing positive regulation of neurotransmitter secretion Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter. NMDCO_relaxed.owl GO:0002028 biolink:NamedThing regulation of sodium ion transport Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0002052 biolink:NamedThing positive regulation of neuroblast proliferation Any process that activates or increases the rate of neuroblast proliferation. NMDCO_relaxed.owl GO:0002053 biolink:NamedThing positive regulation of mesenchymal cell proliferation The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells. NMDCO_relaxed.owl GO:0002085 biolink:NamedThing inhibition of neuroepithelial cell differentiation Any process that prevents the activation of neuroepithelial cell differentiation. Neuroepithelial cell differentiation is the process in which epiblast cells acquire specialized features of neuroepithelial cells. NMDCO_relaxed.owl GO:0002682 biolink:NamedThing regulation of immune system process Any process that modulates the frequency, rate, or extent of an immune system process. NMDCO_relaxed.owl GO:0002683 biolink:NamedThing negative regulation of immune system process Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune system process. NMDCO_relaxed.owl GO:0002684 biolink:NamedThing positive regulation of immune system process Any process that activates or increases the frequency, rate, or extent of an immune system process. NMDCO_relaxed.owl GO:0002697 biolink:NamedThing regulation of immune effector process Any process that modulates the frequency, rate, or extent of an immune effector process. NMDCO_relaxed.owl GO:0002698 biolink:NamedThing negative regulation of immune effector process Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune effector process. NMDCO_relaxed.owl GO:0002699 biolink:NamedThing positive regulation of immune effector process Any process that activates or increases the frequency, rate, or extent of an immune effector process. NMDCO_relaxed.owl GO:0002703 biolink:NamedThing regulation of leukocyte mediated immunity Any process that modulates the frequency, rate, or extent of leukocyte mediated immunity. NMDCO_relaxed.owl GO:0002704 biolink:NamedThing negative regulation of leukocyte mediated immunity Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte mediated immunity. NMDCO_relaxed.owl GO:0002705 biolink:NamedThing positive regulation of leukocyte mediated immunity Any process that activates or increases the frequency, rate, or extent of leukocyte mediated immunity. NMDCO_relaxed.owl GO:0002761 biolink:NamedThing regulation of myeloid leukocyte differentiation Any process that modulates the frequency, rate, or extent of myeloid leukocyte differentiation. NMDCO_relaxed.owl GO:0002762 biolink:NamedThing negative regulation of myeloid leukocyte differentiation Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte differentiation. NMDCO_relaxed.owl GO:0002763 biolink:NamedThing positive regulation of myeloid leukocyte differentiation Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte differentiation. NMDCO_relaxed.owl GO:0002791 biolink:NamedThing regulation of peptide secretion Any process that modulates the frequency, rate, or extent of peptide secretion. NMDCO_relaxed.owl GO:0002792 biolink:NamedThing negative regulation of peptide secretion Any process that stops, prevents, or reduces the frequency, rate, or extent of peptide secretion. NMDCO_relaxed.owl GO:0002793 biolink:NamedThing positive regulation of peptide secretion Any process that activates or increases the frequency, rate, or extent of peptide secretion. NMDCO_relaxed.owl GO:0002831 biolink:NamedThing regulation of response to biotic stimulus Any process that modulates the frequency, rate, or extent of a response to biotic stimulus. NMDCO_relaxed.owl GO:0002832 biolink:NamedThing negative regulation of response to biotic stimulus Any process that stops, prevents, or reduces the frequency, rate, or extent of a response to biotic stimulus. NMDCO_relaxed.owl GO:0002833 biolink:NamedThing positive regulation of response to biotic stimulus Any process that activates or increases the frequency, rate, or extent of a response to biotic stimulus. NMDCO_relaxed.owl GO:0002886 biolink:NamedThing regulation of myeloid leukocyte mediated immunity Any process that modulates the frequency, rate, or extent of myeloid leukocyte mediated immunity. NMDCO_relaxed.owl GO:0002887 biolink:NamedThing negative regulation of myeloid leukocyte mediated immunity Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte mediated immunity. NMDCO_relaxed.owl GO:0002888 biolink:NamedThing positive regulation of myeloid leukocyte mediated immunity Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte mediated immunity. NMDCO_relaxed.owl GO:0003156 biolink:NamedThing regulation of animal organ formation Any process that modulates the rate, frequency or extent of animal organ formation. Organ formation is the process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. NMDCO_relaxed.owl GO:0005979 biolink:NamedThing regulation of glycogen biosynthetic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen. NMDCO_relaxed.owl GO:0005981 biolink:NamedThing regulation of glycogen catabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen. NMDCO_relaxed.owl GO:0006109 biolink:NamedThing regulation of carbohydrate metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving carbohydrates. NMDCO_relaxed.owl GO:0006111 biolink:NamedThing regulation of gluconeogenesis Any process that modulates the frequency, rate or extent of gluconeogenesis, the formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol. NMDCO_relaxed.owl GO:0006417 biolink:NamedThing regulation of translation Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. NMDCO_relaxed.owl GO:0006446 biolink:NamedThing regulation of translational initiation Any process that modulates the frequency, rate or extent of translational initiation. NMDCO_relaxed.owl GO:0006448 biolink:NamedThing regulation of translational elongation Any process that modulates the frequency, rate, extent or accuracy of translational elongation. NMDCO_relaxed.owl GO:0006449 biolink:NamedThing regulation of translational termination Any process that modulates the frequency, rate or extent of translational termination. NMDCO_relaxed.owl GO:0006521 biolink:NamedThing regulation of cellular amino acid metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amino acids. NMDCO_relaxed.owl GO:0006937 biolink:NamedThing regulation of muscle contraction Any process that modulates the frequency, rate or extent of muscle contraction. NMDCO_relaxed.owl GO:0006940 biolink:NamedThing regulation of smooth muscle contraction Any process that modulates the frequency, rate or extent of smooth muscle contraction. NMDCO_relaxed.owl GO:0006942 biolink:NamedThing regulation of striated muscle contraction Any process that modulates the frequency, rate or extent of striated muscle contraction. NMDCO_relaxed.owl GO:0007026 biolink:NamedThing negative regulation of microtubule depolymerization Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol. NMDCO_relaxed.owl GO:0007027 biolink:NamedThing negative regulation of axonemal microtubule depolymerization Any process that stops, prevents, or reduces the frequency, rate or extent of the depolymerization of the specialized microtubules of the axoneme. NMDCO_relaxed.owl GO:0007088 biolink:NamedThing regulation of mitotic nuclear division Any process that modulates the frequency, rate or extent of mitosis. NMDCO_relaxed.owl GO:0007346 biolink:NamedThing regulation of mitotic cell cycle Any process that modulates the rate or extent of progress through the mitotic cell cycle. NMDCO_relaxed.owl GO:0007406 biolink:NamedThing negative regulation of neuroblast proliferation Any process that stops, prevents, or reduces the frequency, rate or extent of the proliferation of neuroblasts. NMDCO_relaxed.owl GO:0008016 biolink:NamedThing regulation of heart contraction Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process in which the heart decreases in volume in a characteristic way to propel blood through the body. NMDCO_relaxed.owl GO:0008284 biolink:NamedThing positive regulation of cell population proliferation Any process that activates or increases the rate or extent of cell proliferation. NMDCO_relaxed.owl GO:0008285 biolink:NamedThing negative regulation of cell population proliferation Any process that stops, prevents or reduces the rate or extent of cell proliferation. NMDCO_relaxed.owl GO:0009786 biolink:NamedThing regulation of asymmetric cell division Any process that modulates the frequency, rate or extent of asymmetric cell division. NMDCO_relaxed.owl GO:0009889 biolink:NamedThing regulation of biosynthetic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances. NMDCO_relaxed.owl GO:0009890 biolink:NamedThing negative regulation of biosynthetic process Any process that stops, prevents, or reduces the rate of the chemical reactions and pathways resulting in the formation of substances. NMDCO_relaxed.owl GO:0009891 biolink:NamedThing positive regulation of biosynthetic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances. NMDCO_relaxed.owl GO:0009892 biolink:NamedThing negative regulation of metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism. NMDCO_relaxed.owl GO:0009893 biolink:NamedThing positive regulation of metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism. NMDCO_relaxed.owl GO:0009894 biolink:NamedThing regulation of catabolic process Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of substances. NMDCO_relaxed.owl GO:0009895 biolink:NamedThing negative regulation of catabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances. NMDCO_relaxed.owl GO:0009896 biolink:NamedThing positive regulation of catabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances. NMDCO_relaxed.owl GO:0009966 biolink:NamedThing regulation of signal transduction Any process that modulates the frequency, rate or extent of signal transduction. NMDCO_relaxed.owl GO:0009967 biolink:NamedThing positive regulation of signal transduction Any process that activates or increases the frequency, rate or extent of signal transduction. NMDCO_relaxed.owl GO:0009968 biolink:NamedThing negative regulation of signal transduction Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction. NMDCO_relaxed.owl GO:0010453 biolink:NamedThing regulation of cell fate commitment Any process that modulates the frequency, rate or extent of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field. NMDCO_relaxed.owl GO:0010454 biolink:NamedThing negative regulation of cell fate commitment Any process that stops, prevents or reduces the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field. NMDCO_relaxed.owl GO:0010455 biolink:NamedThing positive regulation of cell fate commitment Any process that activates, maintains or increases the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field. NMDCO_relaxed.owl GO:0010464 biolink:NamedThing regulation of mesenchymal cell proliferation Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. NMDCO_relaxed.owl GO:0010468 biolink:NamedThing regulation of gene expression Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). NMDCO_relaxed.owl GO:0010470 biolink:NamedThing regulation of gastrulation Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. NMDCO_relaxed.owl GO:0010482 biolink:NamedThing regulation of epidermal cell division Any process that modulates the frequency, rate or extent of the physical partitioning and separation of an epidermal cell into daughter cells. An epidermal cell is any of the cells that make up the epidermis. NMDCO_relaxed.owl GO:0010556 biolink:NamedThing regulation of macromolecule biosynthetic process Any process that modulates the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. NMDCO_relaxed.owl GO:0010557 biolink:NamedThing positive regulation of macromolecule biosynthetic process Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. NMDCO_relaxed.owl GO:0010558 biolink:NamedThing negative regulation of macromolecule biosynthetic process Any process that decreases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. NMDCO_relaxed.owl GO:0010559 biolink:NamedThing regulation of glycoprotein biosynthetic process Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. NMDCO_relaxed.owl GO:0010560 biolink:NamedThing positive regulation of glycoprotein biosynthetic process Any process that increases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. NMDCO_relaxed.owl GO:0010561 biolink:NamedThing negative regulation of glycoprotein biosynthetic process Any process that decreases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. NMDCO_relaxed.owl GO:0010562 biolink:NamedThing positive regulation of phosphorus metabolic process Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving phosphorus or compounds containing phosphorus. NMDCO_relaxed.owl GO:0010563 biolink:NamedThing negative regulation of phosphorus metabolic process Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving phosphorus or compounds containing phosphorus. NMDCO_relaxed.owl GO:0010564 biolink:NamedThing regulation of cell cycle process Any process that modulates a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. NMDCO_relaxed.owl GO:0010565 biolink:NamedThing regulation of cellular ketone metabolic process Any process that modulates the chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups. NMDCO_relaxed.owl GO:0010566 biolink:NamedThing regulation of ketone biosynthetic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a ketone, carried out by individual cells. NMDCO_relaxed.owl GO:0010567 biolink:NamedThing regulation of ketone catabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a ketone, carried out by individual cells. NMDCO_relaxed.owl GO:0010604 biolink:NamedThing positive regulation of macromolecule metabolic process Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. NMDCO_relaxed.owl GO:0010605 biolink:NamedThing negative regulation of macromolecule metabolic process Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. NMDCO_relaxed.owl GO:0010611 biolink:NamedThing regulation of cardiac muscle hypertrophy Any process that modulates the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division. NMDCO_relaxed.owl GO:0010612 biolink:NamedThing regulation of cardiac muscle adaptation Any process that modulates the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. NMDCO_relaxed.owl GO:0010613 biolink:NamedThing positive regulation of cardiac muscle hypertrophy Any process that increases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division. NMDCO_relaxed.owl GO:0010614 biolink:NamedThing negative regulation of cardiac muscle hypertrophy Any process that decreases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division. NMDCO_relaxed.owl GO:0010615 biolink:NamedThing positive regulation of cardiac muscle adaptation Any process that increases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. NMDCO_relaxed.owl GO:0010616 biolink:NamedThing negative regulation of cardiac muscle adaptation Any process that decreases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. NMDCO_relaxed.owl GO:0010628 biolink:NamedThing positive regulation of gene expression Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). NMDCO_relaxed.owl GO:0010629 biolink:NamedThing negative regulation of gene expression Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA). NMDCO_relaxed.owl GO:0010638 biolink:NamedThing positive regulation of organelle organization Any process that increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle. NMDCO_relaxed.owl GO:0010639 biolink:NamedThing negative regulation of organelle organization Any process that decreases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle. NMDCO_relaxed.owl GO:0010646 biolink:NamedThing regulation of cell communication Any process that modulates the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. NMDCO_relaxed.owl GO:0010647 biolink:NamedThing positive regulation of cell communication Any process that increases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. NMDCO_relaxed.owl GO:0010648 biolink:NamedThing negative regulation of cell communication Any process that decreases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. NMDCO_relaxed.owl GO:0010656 biolink:NamedThing negative regulation of muscle cell apoptotic process Any process that decreases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death. NMDCO_relaxed.owl GO:0010660 biolink:NamedThing regulation of muscle cell apoptotic process Any process that modulates the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death. NMDCO_relaxed.owl GO:0010661 biolink:NamedThing positive regulation of muscle cell apoptotic process Any process that increases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death. NMDCO_relaxed.owl GO:0010662 biolink:NamedThing regulation of striated muscle cell apoptotic process Any process that modulates the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death. NMDCO_relaxed.owl GO:0010663 biolink:NamedThing positive regulation of striated muscle cell apoptotic process Any process that increases the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death. NMDCO_relaxed.owl GO:0010664 biolink:NamedThing negative regulation of striated muscle cell apoptotic process Any process that decreases the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death. NMDCO_relaxed.owl GO:0010665 biolink:NamedThing regulation of cardiac muscle cell apoptotic process Any process that modulates the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death. NMDCO_relaxed.owl GO:0010666 biolink:NamedThing positive regulation of cardiac muscle cell apoptotic process Any process that increases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death. NMDCO_relaxed.owl GO:0010667 biolink:NamedThing negative regulation of cardiac muscle cell apoptotic process Any process that decreases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death. NMDCO_relaxed.owl GO:0010700 biolink:NamedThing negative regulation of norepinephrine secretion Any process that decreases the frequency, rate or extent of the regulated release of norepinephrine. NMDCO_relaxed.owl GO:0010701 biolink:NamedThing positive regulation of norepinephrine secretion Any process that increases the frequency, rate or extent of the regulated release of norepinephrine. NMDCO_relaxed.owl GO:0010710 biolink:NamedThing regulation of collagen catabolic process Any process that modulates the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix. NMDCO_relaxed.owl GO:0010711 biolink:NamedThing negative regulation of collagen catabolic process Any process that decreases the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix. NMDCO_relaxed.owl GO:0010712 biolink:NamedThing regulation of collagen metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. NMDCO_relaxed.owl GO:0010713 biolink:NamedThing negative regulation of collagen metabolic process Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. NMDCO_relaxed.owl GO:0010714 biolink:NamedThing positive regulation of collagen metabolic process Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. NMDCO_relaxed.owl GO:0010715 biolink:NamedThing regulation of extracellular matrix disassembly Any process that modulates the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix. NMDCO_relaxed.owl GO:0010716 biolink:NamedThing negative regulation of extracellular matrix disassembly Any process that decreases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix. NMDCO_relaxed.owl GO:0010717 biolink:NamedThing regulation of epithelial to mesenchymal transition Any process that modulates the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. NMDCO_relaxed.owl GO:0010718 biolink:NamedThing positive regulation of epithelial to mesenchymal transition Any process that increases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition is where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. NMDCO_relaxed.owl GO:0010719 biolink:NamedThing negative regulation of epithelial to mesenchymal transition Any process that decreases the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. NMDCO_relaxed.owl GO:0010720 biolink:NamedThing positive regulation of cell development Any process that increases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. NMDCO_relaxed.owl GO:0010721 biolink:NamedThing negative regulation of cell development Any process that decreases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. NMDCO_relaxed.owl GO:0010765 biolink:NamedThing positive regulation of sodium ion transport Any process that increases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0010766 biolink:NamedThing negative regulation of sodium ion transport Any process that decreases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0010770 biolink:NamedThing positive regulation of cell morphogenesis Any process that increases the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. NMDCO_relaxed.owl GO:0010771 biolink:NamedThing negative regulation of cell morphogenesis Any process that decreases the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. NMDCO_relaxed.owl GO:0010817 biolink:NamedThing regulation of hormone levels Any process that modulates the levels of hormone within an organism or a tissue. A hormone is any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. NMDCO_relaxed.owl GO:0010827 biolink:NamedThing regulation of glucose transmembrane transport Any process that modulates the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0010828 biolink:NamedThing positive regulation of glucose transmembrane transport Any process that increases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0010829 biolink:NamedThing negative regulation of glucose transmembrane transport Any process that decreases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0010830 biolink:NamedThing regulation of myotube differentiation Any process that modulates the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. NMDCO_relaxed.owl GO:0010831 biolink:NamedThing positive regulation of myotube differentiation Any process that activates, maintains or increases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. NMDCO_relaxed.owl GO:0010832 biolink:NamedThing negative regulation of myotube differentiation Any process that decreases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. NMDCO_relaxed.owl GO:0010893 biolink:NamedThing positive regulation of steroid biosynthetic process Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. NMDCO_relaxed.owl GO:0010894 biolink:NamedThing negative regulation of steroid biosynthetic process Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. NMDCO_relaxed.owl GO:0010906 biolink:NamedThing regulation of glucose metabolic process Any process that modulates the rate, frequency or extent of glucose metabolism. Glucose metabolic processes are the chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. NMDCO_relaxed.owl GO:0010907 biolink:NamedThing positive regulation of glucose metabolic process Any process that increases the rate, frequency or extent of glucose metabolism. Glucose metabolic processes are the chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. NMDCO_relaxed.owl GO:0010937 biolink:NamedThing regulation of cytoplasmic microtubule depolymerization Any process that modulates the frequency, rate or extent of cytoplasmic microtubule depolymerization. NMDCO_relaxed.owl GO:0010948 biolink:NamedThing negative regulation of cell cycle process Any process that decreases the rate, frequency or extent of a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. NMDCO_relaxed.owl GO:0010959 biolink:NamedThing regulation of metal ion transport Any process that modulates the frequency, rate, or extent of metal ion transport. Metal ion transport is the directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0010962 biolink:NamedThing regulation of glucan biosynthetic process Any process that modulates the rate, frequency, or extent of glucan biosynthesis. Glucan biosynthetic processes are the chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues. NMDCO_relaxed.owl GO:0010966 biolink:NamedThing regulation of phosphate transport Any process that modulates the frequency, rate or extent of phosphate transport. Phosphate transport is the directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0010968 biolink:NamedThing regulation of microtubule nucleation Any process that modulates the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell. NMDCO_relaxed.owl GO:0010975 biolink:NamedThing regulation of neuron projection development Any process that modulates the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). NMDCO_relaxed.owl GO:0010976 biolink:NamedThing positive regulation of neuron projection development Any process that increases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). NMDCO_relaxed.owl GO:0010977 biolink:NamedThing negative regulation of neuron projection development Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). NMDCO_relaxed.owl GO:0014013 biolink:NamedThing regulation of gliogenesis Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia. NMDCO_relaxed.owl GO:0014014 biolink:NamedThing negative regulation of gliogenesis Any process that stops, prevents, or reduces the frequency, rate or extent of gliogenesis, the formation of mature glia. NMDCO_relaxed.owl GO:0014015 biolink:NamedThing positive regulation of gliogenesis Any process that activates or increases the frequency, rate or extent of gliogenesis, the formation of mature glia. NMDCO_relaxed.owl GO:0014041 biolink:NamedThing regulation of neuron maturation Any process that modulates the frequency, rate or extent of neuron maturation, the process leading to the attainment of the full functional capacity of a neuron. This process is independent of morphogenetic change. NMDCO_relaxed.owl GO:0014042 biolink:NamedThing positive regulation of neuron maturation Any process that activates or increases the frequency, rate or extent of neuron maturation. NMDCO_relaxed.owl GO:0014043 biolink:NamedThing negative regulation of neuron maturation Any process that stops, prevents, or reduces the frequency, rate or extent of neuron maturation. NMDCO_relaxed.owl GO:0014056 biolink:NamedThing regulation of acetylcholine secretion, neurotransmission Any process that modulates the frequency, rate or extent of the regulated release of acetylcholine. NMDCO_relaxed.owl GO:0014057 biolink:NamedThing positive regulation of acetylcholine secretion, neurotransmission Any process that activates or increases the frequency, rate or extent of the regulated release of acetylcholine. NMDCO_relaxed.owl GO:0014058 biolink:NamedThing negative regulation of acetylcholine secretion, neurotransmission Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of acetylcholine. NMDCO_relaxed.owl GO:0014061 biolink:NamedThing regulation of norepinephrine secretion Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine. NMDCO_relaxed.owl GO:0014062 biolink:NamedThing regulation of serotonin secretion Any process that modulates the frequency, rate or extent of the regulated release of serotonin. NMDCO_relaxed.owl GO:0014063 biolink:NamedThing negative regulation of serotonin secretion Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of serotonin. NMDCO_relaxed.owl GO:0014064 biolink:NamedThing positive regulation of serotonin secretion Any process that activates or increases the frequency, rate or extent of the regulated release of serotonin. NMDCO_relaxed.owl GO:0014733 biolink:NamedThing regulation of skeletal muscle adaptation Any process in which skeletal muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. NMDCO_relaxed.owl GO:0014741 biolink:NamedThing negative regulation of muscle hypertrophy Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hypertrophy. NMDCO_relaxed.owl GO:0014742 biolink:NamedThing positive regulation of muscle hypertrophy Any process that activates or increases the frequency, rate or extent of muscle hypertrophy. NMDCO_relaxed.owl GO:0014743 biolink:NamedThing regulation of muscle hypertrophy Any process that modulates the frequency, rate or extent of muscle hypertrophy. NMDCO_relaxed.owl GO:0014744 biolink:NamedThing positive regulation of muscle adaptation Any process that activates or increases the frequency, rate or extent of muscle adaptation. NMDCO_relaxed.owl GO:0014745 biolink:NamedThing negative regulation of muscle adaptation Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle adaptation. NMDCO_relaxed.owl GO:0014807 biolink:NamedThing regulation of somitogenesis Any process that modulates the frequency, rate or extent of somitogenesis. NMDCO_relaxed.owl GO:0014819 biolink:NamedThing regulation of skeletal muscle contraction Any process that modulates the frequency, rate or extent of skeletal muscle contraction. NMDCO_relaxed.owl GO:0014857 biolink:NamedThing regulation of skeletal muscle cell proliferation Any process that modulates the frequency, rate or extent of skeletal muscle cell proliferation. NMDCO_relaxed.owl GO:0014858 biolink:NamedThing positive regulation of skeletal muscle cell proliferation Any process that activates or increases the frequency, rate or extent of skeletal muscle cell proliferation. NMDCO_relaxed.owl GO:0014859 biolink:NamedThing negative regulation of skeletal muscle cell proliferation Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle cell proliferation. NMDCO_relaxed.owl GO:0016202 biolink:NamedThing regulation of striated muscle tissue development Any process that modulates the frequency, rate or extent of striated muscle development. NMDCO_relaxed.owl GO:0016525 biolink:NamedThing negative regulation of angiogenesis Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis. NMDCO_relaxed.owl GO:0017148 biolink:NamedThing negative regulation of translation Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. NMDCO_relaxed.owl GO:0017157 biolink:NamedThing regulation of exocytosis Any process that modulates the frequency, rate or extent of exocytosis. NMDCO_relaxed.owl GO:0019216 biolink:NamedThing regulation of lipid metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids. NMDCO_relaxed.owl GO:0019218 biolink:NamedThing regulation of steroid metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids. NMDCO_relaxed.owl GO:0019219 biolink:NamedThing regulation of nucleobase-containing compound metabolic process Any cellular process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. NMDCO_relaxed.owl GO:0019220 biolink:NamedThing regulation of phosphate metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving phosphates. NMDCO_relaxed.owl GO:0019222 biolink:NamedThing regulation of metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism. NMDCO_relaxed.owl GO:0022603 biolink:NamedThing regulation of anatomical structure morphogenesis Any process that modulates the frequency, rate or extent of anatomical structure morphogenesis. NMDCO_relaxed.owl GO:0022604 biolink:NamedThing regulation of cell morphogenesis Any process that modulates the frequency, rate or extent of cell morphogenesis. Cell morphogenesis is the developmental process in which the shape of a cell is generated and organized. NMDCO_relaxed.owl GO:0022898 biolink:NamedThing regulation of transmembrane transporter activity Any process that modulates the frequency, rate or extent of transmembrane transporter activity. NMDCO_relaxed.owl GO:0023051 biolink:NamedThing regulation of signaling Any process that modulates the frequency, rate or extent of a signaling process. NMDCO_relaxed.owl GO:0023056 biolink:NamedThing positive regulation of signaling Any process that activates, maintains or increases the frequency, rate or extent of a signaling process. NMDCO_relaxed.owl GO:0023057 biolink:NamedThing negative regulation of signaling Any process that stops, prevents, or reduces the frequency, rate or extent of a signaling process. NMDCO_relaxed.owl GO:0030278 biolink:NamedThing regulation of ossification Any process that modulates the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance. NMDCO_relaxed.owl GO:0030279 biolink:NamedThing negative regulation of ossification Any process that stops, prevents, or reduces the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance. NMDCO_relaxed.owl GO:0030307 biolink:NamedThing positive regulation of cell growth Any process that activates or increases the frequency, rate, extent or direction of cell growth. NMDCO_relaxed.owl GO:0030308 biolink:NamedThing negative regulation of cell growth Any process that stops, prevents, or reduces the frequency, rate, extent or direction of cell growth. NMDCO_relaxed.owl GO:0030334 biolink:NamedThing regulation of cell migration Any process that modulates the frequency, rate or extent of cell migration. NMDCO_relaxed.owl GO:0030335 biolink:NamedThing positive regulation of cell migration Any process that activates or increases the frequency, rate or extent of cell migration. NMDCO_relaxed.owl GO:0030336 biolink:NamedThing negative regulation of cell migration Any process that stops, prevents, or reduces the frequency, rate or extent of cell migration. NMDCO_relaxed.owl GO:0030856 biolink:NamedThing regulation of epithelial cell differentiation Any process that modulates the frequency, rate or extent of epithelial cell differentiation. NMDCO_relaxed.owl GO:0030857 biolink:NamedThing negative regulation of epithelial cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell differentiation. NMDCO_relaxed.owl GO:0030858 biolink:NamedThing positive regulation of epithelial cell differentiation Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation. NMDCO_relaxed.owl GO:0031110 biolink:NamedThing regulation of microtubule polymerization or depolymerization Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule. NMDCO_relaxed.owl GO:0031111 biolink:NamedThing negative regulation of microtubule polymerization or depolymerization Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization or depolymerization. NMDCO_relaxed.owl GO:0031112 biolink:NamedThing positive regulation of microtubule polymerization or depolymerization Any process that activates or increases the frequency, rate or extent of microtubule polymerization or depolymerization. NMDCO_relaxed.owl GO:0031113 biolink:NamedThing regulation of microtubule polymerization Any process that modulates the frequency, rate or extent of microtubule polymerization. NMDCO_relaxed.owl GO:0031114 biolink:NamedThing regulation of microtubule depolymerization Any process that modulates the frequency, rate or extent of microtubule depolymerization. NMDCO_relaxed.owl GO:0031115 biolink:NamedThing negative regulation of microtubule polymerization Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization. NMDCO_relaxed.owl GO:0031116 biolink:NamedThing positive regulation of microtubule polymerization Any process that activates or increases the frequency, rate or extent of microtubule polymerization. NMDCO_relaxed.owl GO:0031117 biolink:NamedThing positive regulation of microtubule depolymerization Any process that activates or increases the frequency, rate or extent of microtubule depolymerization. NMDCO_relaxed.owl GO:0031323 biolink:NamedThing regulation of cellular metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances. NMDCO_relaxed.owl GO:0031324 biolink:NamedThing negative regulation of cellular metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances. NMDCO_relaxed.owl GO:0031325 biolink:NamedThing positive regulation of cellular metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances. NMDCO_relaxed.owl GO:0031326 biolink:NamedThing regulation of cellular biosynthetic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells. NMDCO_relaxed.owl GO:0031327 biolink:NamedThing negative regulation of cellular biosynthetic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells. NMDCO_relaxed.owl GO:0031328 biolink:NamedThing positive regulation of cellular biosynthetic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells. NMDCO_relaxed.owl GO:0031329 biolink:NamedThing regulation of cellular catabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells. NMDCO_relaxed.owl GO:0031330 biolink:NamedThing negative regulation of cellular catabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells. NMDCO_relaxed.owl GO:0031331 biolink:NamedThing positive regulation of cellular catabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells. NMDCO_relaxed.owl GO:0031333 biolink:NamedThing negative regulation of protein-containing complex assembly Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex assembly. NMDCO_relaxed.owl GO:0031334 biolink:NamedThing positive regulation of protein-containing complex assembly Any process that activates or increases the frequency, rate or extent of protein complex assembly. NMDCO_relaxed.owl GO:0031338 biolink:NamedThing regulation of vesicle fusion Any process that modulates the frequency, rate or extent of vesicle fusion. NMDCO_relaxed.owl GO:0031339 biolink:NamedThing negative regulation of vesicle fusion Any process that stops, prevents, or reduces the frequency, rate or extent of vesicle fusion. NMDCO_relaxed.owl GO:0031340 biolink:NamedThing positive regulation of vesicle fusion Any process that activates or increases the frequency, rate or extent of vesicle fusion. NMDCO_relaxed.owl GO:0031345 biolink:NamedThing negative regulation of cell projection organization Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections. NMDCO_relaxed.owl GO:0031346 biolink:NamedThing positive regulation of cell projection organization Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections. NMDCO_relaxed.owl GO:0031644 biolink:NamedThing regulation of nervous system process Any process that modulates the frequency, rate or extent of a neurophysiological process, an organ system process carried out by any of the organs or tissues of the nervous system. NMDCO_relaxed.owl GO:0031645 biolink:NamedThing negative regulation of nervous system process Any process that stops, prevents, or reduces the frequency, rate or extent of a neurophysiological process. NMDCO_relaxed.owl GO:0031646 biolink:NamedThing positive regulation of nervous system process Any process that activates or increases the frequency, rate or extent of a neurophysiological process. NMDCO_relaxed.owl GO:0032024 biolink:NamedThing positive regulation of insulin secretion Any process that activates or increases the frequency, rate or extent of the regulated release of insulin. NMDCO_relaxed.owl GO:0032057 biolink:NamedThing negative regulation of translational initiation in response to stress Any process that stops, prevents or reduces the rate of translation initiation as a result of a stimulus indicating the organism is under stress. NMDCO_relaxed.owl GO:0032058 biolink:NamedThing positive regulation of translational initiation in response to stress Any process that activates or increases the frequency, rate or extent of translation initiation as a result of a stimulus indicating the organism is under stress. NMDCO_relaxed.owl GO:0032069 biolink:NamedThing regulation of nuclease activity Any process that modulates the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids. NMDCO_relaxed.owl GO:0032070 biolink:NamedThing regulation of deoxyribonuclease activity Any process that modulates the frequency, rate or extent of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid. NMDCO_relaxed.owl GO:0032074 biolink:NamedThing negative regulation of nuclease activity Any process that stops or reduces the rate of nuclease activity, the hydrolysis of ester linkages within nucleic acids. NMDCO_relaxed.owl GO:0032075 biolink:NamedThing positive regulation of nuclease activity Any process that activates or increases the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids. NMDCO_relaxed.owl GO:0032076 biolink:NamedThing negative regulation of deoxyribonuclease activity Any process that stops or reduces the rate of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid. NMDCO_relaxed.owl GO:0032077 biolink:NamedThing positive regulation of deoxyribonuclease activity Any process that activates or increases the frequency, rate or extent of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid. NMDCO_relaxed.owl GO:0032101 biolink:NamedThing regulation of response to external stimulus Any process that modulates the frequency, rate or extent of a response to an external stimulus. NMDCO_relaxed.owl GO:0032102 biolink:NamedThing negative regulation of response to external stimulus Any process that stops, prevents, or reduces the frequency, rate or extent of a response to an external stimulus. NMDCO_relaxed.owl GO:0032103 biolink:NamedThing positive regulation of response to external stimulus Any process that activates, maintains or increases the rate of a response to an external stimulus. NMDCO_relaxed.owl GO:0032222 biolink:NamedThing regulation of synaptic transmission, cholinergic Any process that modulates the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine. NMDCO_relaxed.owl GO:0032223 biolink:NamedThing negative regulation of synaptic transmission, cholinergic Any process that stops, prevents, or reduces the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine. NMDCO_relaxed.owl GO:0032224 biolink:NamedThing positive regulation of synaptic transmission, cholinergic Any process that activates, maintains or increases the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine. NMDCO_relaxed.owl GO:0032231 biolink:NamedThing regulation of actin filament bundle assembly Any process that modulates the frequency, rate or extent of the assembly of actin filament bundles. NMDCO_relaxed.owl GO:0032232 biolink:NamedThing negative regulation of actin filament bundle assembly Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly of actin filament bundles. NMDCO_relaxed.owl GO:0032233 biolink:NamedThing positive regulation of actin filament bundle assembly Any process that activates or increases the frequency, rate or extent of the assembly of actin filament bundles. NMDCO_relaxed.owl GO:0032239 biolink:NamedThing regulation of nucleobase-containing compound transport Any process that modulates the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0032240 biolink:NamedThing negative regulation of nucleobase-containing compound transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0032241 biolink:NamedThing positive regulation of nucleobase-containing compound transport Any process that activates or increases the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0032271 biolink:NamedThing regulation of protein polymerization Any process that modulates the frequency, rate or extent of the process of creating protein polymers. NMDCO_relaxed.owl GO:0032272 biolink:NamedThing negative regulation of protein polymerization Any process that stops, prevents, or reduces the frequency, rate or extent of the process of creating protein polymers. NMDCO_relaxed.owl GO:0032273 biolink:NamedThing positive regulation of protein polymerization Any process that activates or increases the frequency, rate or extent of the process of creating protein polymers. NMDCO_relaxed.owl GO:0032330 biolink:NamedThing regulation of chondrocyte differentiation Any process that modulates the frequency, rate or extent of chondrocyte differentiation. NMDCO_relaxed.owl GO:0032331 biolink:NamedThing negative regulation of chondrocyte differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of chondrocyte differentiation. NMDCO_relaxed.owl GO:0032332 biolink:NamedThing positive regulation of chondrocyte differentiation Any process that activates or increases the frequency, rate or extent of chondrocyte differentiation. NMDCO_relaxed.owl GO:0032368 biolink:NamedThing regulation of lipid transport Any process that modulates the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0032369 biolink:NamedThing negative regulation of lipid transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0032370 biolink:NamedThing positive regulation of lipid transport Any process that activates or increases the frequency, rate or extent of the directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0032377 biolink:NamedThing regulation of intracellular lipid transport Any process that modulates the frequency, rate or extent of the directed movement of lipids within cells. NMDCO_relaxed.owl GO:0032378 biolink:NamedThing negative regulation of intracellular lipid transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of lipids within cells. NMDCO_relaxed.owl GO:0032379 biolink:NamedThing positive regulation of intracellular lipid transport Any process that activates or increases the frequency, rate or extent of the directed movement of lipids within cells. NMDCO_relaxed.owl GO:0032386 biolink:NamedThing regulation of intracellular transport Any process that modulates the frequency, rate or extent of the directed movement of substances within cells. NMDCO_relaxed.owl GO:0032387 biolink:NamedThing negative regulation of intracellular transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances within cells. NMDCO_relaxed.owl GO:0032388 biolink:NamedThing positive regulation of intracellular transport Any process that activates or increases the frequency, rate or extent of the directed movement of substances within cells. NMDCO_relaxed.owl GO:0032409 biolink:NamedThing regulation of transporter activity Any process that modulates the activity of a transporter. NMDCO_relaxed.owl GO:0032410 biolink:NamedThing negative regulation of transporter activity Any process that stops or reduces the activity of a transporter. NMDCO_relaxed.owl GO:0032411 biolink:NamedThing positive regulation of transporter activity Any process that activates or increases the activity of a transporter. NMDCO_relaxed.owl GO:0032412 biolink:NamedThing regulation of monoatomic ion transmembrane transporter activity Any process that modulates the activity of an ion transporter. NMDCO_relaxed.owl GO:0032413 biolink:NamedThing negative regulation of ion transmembrane transporter activity Any process that stops or reduces the activity of an ion transporter. NMDCO_relaxed.owl GO:0032414 biolink:NamedThing positive regulation of ion transmembrane transporter activity Any process that activates or increases the activity of an ion transporter. NMDCO_relaxed.owl GO:0032530 biolink:NamedThing regulation of microvillus organization Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a microvillus. NMDCO_relaxed.owl GO:0032534 biolink:NamedThing regulation of microvillus assembly A process that modulates the formation of a microvillus. NMDCO_relaxed.owl GO:0032871 biolink:NamedThing regulation of karyogamy Any process that modulates the frequency, rate or extent of karyogamy, the creation of a single nucleus from multiple nuclei as a result of membrane fusion. NMDCO_relaxed.owl GO:0032878 biolink:NamedThing regulation of establishment or maintenance of cell polarity Any process that modulates the frequency, rate or extent of the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns. NMDCO_relaxed.owl GO:0032879 biolink:NamedThing regulation of localization Any process that modulates the frequency, rate or extent of any process in which a cell, a substance, or a cellular entity is transported to, or maintained in, a specific location. NMDCO_relaxed.owl GO:0032880 biolink:NamedThing regulation of protein localization Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location. NMDCO_relaxed.owl GO:0032881 biolink:NamedThing regulation of polysaccharide metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving polysaccharides. NMDCO_relaxed.owl GO:0032885 biolink:NamedThing regulation of polysaccharide biosynthetic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides. NMDCO_relaxed.owl GO:0032886 biolink:NamedThing regulation of microtubule-based process Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton. NMDCO_relaxed.owl GO:0032890 biolink:NamedThing regulation of organic acid transport Any process that modulates the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0032891 biolink:NamedThing negative regulation of organic acid transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0032892 biolink:NamedThing positive regulation of organic acid transport Any process that activates or increases the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0032944 biolink:NamedThing regulation of mononuclear cell proliferation Any process that modulates the frequency, rate or extent of mononuclear cell proliferation. NMDCO_relaxed.owl GO:0032945 biolink:NamedThing negative regulation of mononuclear cell proliferation Any process that stops, prevents, or reduces the frequency, rate or extent of mononuclear cell proliferation. NMDCO_relaxed.owl GO:0032946 biolink:NamedThing positive regulation of mononuclear cell proliferation Any process that activates or increases the frequency, rate or extent of mononuclear cell proliferation. NMDCO_relaxed.owl GO:0032956 biolink:NamedThing regulation of actin cytoskeleton organization Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. NMDCO_relaxed.owl GO:0032965 biolink:NamedThing regulation of collagen biosynthetic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. NMDCO_relaxed.owl GO:0032966 biolink:NamedThing negative regulation of collagen biosynthetic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. NMDCO_relaxed.owl GO:0032967 biolink:NamedThing positive regulation of collagen biosynthetic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. NMDCO_relaxed.owl GO:0032970 biolink:NamedThing regulation of actin filament-based process Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the actin cytoskeleton. NMDCO_relaxed.owl GO:0033032 biolink:NamedThing regulation of myeloid cell apoptotic process Any process that modulates the frequency, rate, or extent of myeloid cell apoptotic process. NMDCO_relaxed.owl GO:0033033 biolink:NamedThing negative regulation of myeloid cell apoptotic process Any process that stops, prevents, or reduces the frequency, rate, or extent of a myeloid cell apoptotic process. NMDCO_relaxed.owl GO:0033034 biolink:NamedThing positive regulation of myeloid cell apoptotic process Any process that activates or increases the frequency, rate, or extent of myeloid cell apoptotic process. NMDCO_relaxed.owl GO:0033044 biolink:NamedThing regulation of chromosome organization Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a chromosome. NMDCO_relaxed.owl GO:0033045 biolink:NamedThing regulation of sister chromatid segregation Any process that modulates the frequency, rate or extent of sister chromatid segregation. NMDCO_relaxed.owl GO:0033046 biolink:NamedThing negative regulation of sister chromatid segregation Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid segregation. NMDCO_relaxed.owl GO:0033047 biolink:NamedThing regulation of mitotic sister chromatid segregation Any process that modulates the frequency, rate or extent of sister chromatid segregation during mitosis. NMDCO_relaxed.owl GO:0033048 biolink:NamedThing negative regulation of mitotic sister chromatid segregation Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid segregation during mitosis. NMDCO_relaxed.owl GO:0033157 biolink:NamedThing regulation of intracellular protein transport Any process that modulates the frequency, rate or extent of the directed movement of proteins within cells. NMDCO_relaxed.owl GO:0033238 biolink:NamedThing regulation of amine metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform amines. NMDCO_relaxed.owl GO:0033239 biolink:NamedThing negative regulation of amine metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amines. NMDCO_relaxed.owl GO:0033240 biolink:NamedThing positive regulation of amine metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amines. NMDCO_relaxed.owl GO:0033241 biolink:NamedThing regulation of amine catabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of amines. NMDCO_relaxed.owl GO:0033242 biolink:NamedThing negative regulation of amine catabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of amines. NMDCO_relaxed.owl GO:0033243 biolink:NamedThing positive regulation of amine catabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of amines. NMDCO_relaxed.owl GO:0033604 biolink:NamedThing negative regulation of catecholamine secretion Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a catecholamine. NMDCO_relaxed.owl GO:0033605 biolink:NamedThing positive regulation of catecholamine secretion Any process that activates or increases the frequency, rate or extent of the regulated release of a catecholamine. NMDCO_relaxed.owl GO:0033673 biolink:NamedThing negative regulation of kinase activity Any process that stops, prevents, or reduces the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. NMDCO_relaxed.owl GO:0033674 biolink:NamedThing positive regulation of kinase activity Any process that activates or increases the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. NMDCO_relaxed.owl GO:0034242 biolink:NamedThing negative regulation of syncytium formation by plasma membrane fusion Any process that decreases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. NMDCO_relaxed.owl GO:0034248 biolink:NamedThing regulation of amide metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amides. NMDCO_relaxed.owl GO:0034249 biolink:NamedThing negative regulation of amide metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amides. NMDCO_relaxed.owl GO:0034250 biolink:NamedThing positive regulation of amide metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amides. NMDCO_relaxed.owl GO:0034251 biolink:NamedThing regulation of amide catabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of amides. NMDCO_relaxed.owl GO:0034252 biolink:NamedThing negative regulation of amide catabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of amides. NMDCO_relaxed.owl GO:0034253 biolink:NamedThing positive regulation of amide catabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of amides. NMDCO_relaxed.owl GO:0034350 biolink:NamedThing regulation of glial cell apoptotic process Any process that modulates the frequency, rate, or extent of glial cell apoptotic process. NMDCO_relaxed.owl GO:0034351 biolink:NamedThing negative regulation of glial cell apoptotic process Any process that stops, prevents, or reduces the frequency, rate, or extent of glial cell apoptotic process. NMDCO_relaxed.owl GO:0034352 biolink:NamedThing positive regulation of glial cell apoptotic process Any process that activates or increases the frequency, rate, or extent of glial cell apoptotic process. NMDCO_relaxed.owl GO:0034391 biolink:NamedThing regulation of smooth muscle cell apoptotic process Any process that modulates the frequency, rate, or extent of smooth muscle cell apoptotic process. NMDCO_relaxed.owl GO:0034392 biolink:NamedThing negative regulation of smooth muscle cell apoptotic process Any process that stops, prevents, or reduces the frequency, rate, or extent of smooth muscle cell apoptotic process. NMDCO_relaxed.owl GO:0034393 biolink:NamedThing positive regulation of smooth muscle cell apoptotic process Any process that activates or increases the frequency, rate, or extent of smooth muscle cell apoptotic process. NMDCO_relaxed.owl GO:0034762 biolink:NamedThing regulation of transmembrane transport Any process that modulates the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other. NMDCO_relaxed.owl GO:0034763 biolink:NamedThing negative regulation of transmembrane transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other. NMDCO_relaxed.owl GO:0034764 biolink:NamedThing positive regulation of transmembrane transport Any process that activates or increases the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other. NMDCO_relaxed.owl GO:0034765 biolink:NamedThing regulation of monoatomic ion transmembrane transport Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. NMDCO_relaxed.owl GO:0034766 biolink:NamedThing negative regulation of monoatomic ion transmembrane transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. NMDCO_relaxed.owl GO:0034767 biolink:NamedThing positive regulation of monoatomic ion transmembrane transport Any process that activates or increases the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other. NMDCO_relaxed.owl GO:0040012 biolink:NamedThing regulation of locomotion Any process that modulates the frequency, rate or extent of locomotion of a cell or organism. NMDCO_relaxed.owl GO:0040013 biolink:NamedThing negative regulation of locomotion Any process that stops, prevents, or reduces the frequency, rate or extent of locomotion of a cell or organism. NMDCO_relaxed.owl GO:0040014 biolink:NamedThing regulation of multicellular organism growth Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size. NMDCO_relaxed.owl GO:0040015 biolink:NamedThing negative regulation of multicellular organism growth Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organism to reach its usual body size. NMDCO_relaxed.owl GO:0040017 biolink:NamedThing positive regulation of locomotion Any process that activates or increases the frequency, rate or extent of locomotion of a cell or organism. NMDCO_relaxed.owl GO:0040018 biolink:NamedThing positive regulation of multicellular organism growth Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size. NMDCO_relaxed.owl GO:0040019 biolink:NamedThing positive regulation of embryonic development Any process that activates or increases the frequency, rate or extent of embryonic development. NMDCO_relaxed.owl GO:0040020 biolink:NamedThing regulation of meiotic nuclear division Any process that modulates the frequency, rate or extent of meiotic nuclear division, the process in which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes. NMDCO_relaxed.owl GO:0042069 biolink:NamedThing regulation of catecholamine metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving catecholamines. NMDCO_relaxed.owl GO:0042127 biolink:NamedThing regulation of cell population proliferation Any process that modulates the frequency, rate or extent of cell proliferation. NMDCO_relaxed.owl GO:0042176 biolink:NamedThing regulation of protein catabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. NMDCO_relaxed.owl GO:0042177 biolink:NamedThing negative regulation of protein catabolic process Any process that stops, prevents or reduces the frequency, rate or extent of protein catabolic process. NMDCO_relaxed.owl GO:0042325 biolink:NamedThing regulation of phosphorylation Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule. NMDCO_relaxed.owl GO:0042326 biolink:NamedThing negative regulation of phosphorylation Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule. NMDCO_relaxed.owl GO:0042327 biolink:NamedThing positive regulation of phosphorylation Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule. NMDCO_relaxed.owl GO:0042478 biolink:NamedThing regulation of eye photoreceptor cell development Any process that modulates the frequency, rate or extent of eye photoreceptor development. NMDCO_relaxed.owl GO:0042479 biolink:NamedThing positive regulation of eye photoreceptor cell development Any process that activates or increases the frequency, rate or extent of eye photoreceptor development. NMDCO_relaxed.owl GO:0042480 biolink:NamedThing negative regulation of eye photoreceptor cell development Any process that stops, prevents, or reduces the frequency, rate or extent of eye photoreceptor development. NMDCO_relaxed.owl GO:0042762 biolink:NamedThing regulation of sulfur metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving sulfur, the nonmetallic element sulfur or compounds that contain sulfur. NMDCO_relaxed.owl GO:0042981 biolink:NamedThing regulation of apoptotic process Any process that modulates the occurrence or rate of cell death by apoptotic process. NMDCO_relaxed.owl GO:0042996 biolink:NamedThing regulation of Golgi to plasma membrane protein transport Any process that modulates the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane. NMDCO_relaxed.owl GO:0042997 biolink:NamedThing negative regulation of Golgi to plasma membrane protein transport Any process that stops, prevents, or reduces the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane. NMDCO_relaxed.owl GO:0042998 biolink:NamedThing positive regulation of Golgi to plasma membrane protein transport Any process that activates or increases the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane. NMDCO_relaxed.owl GO:0043065 biolink:NamedThing positive regulation of apoptotic process Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process. NMDCO_relaxed.owl GO:0043066 biolink:NamedThing negative regulation of apoptotic process Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process. NMDCO_relaxed.owl GO:0043067 biolink:NamedThing regulation of programmed cell death Any process that modulates the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes. NMDCO_relaxed.owl GO:0043068 biolink:NamedThing positive regulation of programmed cell death Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes. NMDCO_relaxed.owl GO:0043069 biolink:NamedThing negative regulation of programmed cell death Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes. NMDCO_relaxed.owl GO:0043085 biolink:NamedThing positive regulation of catalytic activity Any process that activates or increases the activity of an enzyme. NMDCO_relaxed.owl GO:0043086 biolink:NamedThing negative regulation of catalytic activity Any process that stops or reduces the activity of an enzyme. NMDCO_relaxed.owl GO:0043134 biolink:NamedThing regulation of hindgut contraction Any process that modulates the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine. NMDCO_relaxed.owl GO:0043242 biolink:NamedThing negative regulation of protein-containing complex disassembly Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components. NMDCO_relaxed.owl GO:0043243 biolink:NamedThing positive regulation of protein-containing complex disassembly Any process that activates or increases the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components. NMDCO_relaxed.owl GO:0043255 biolink:NamedThing regulation of carbohydrate biosynthetic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of carbohydrates. NMDCO_relaxed.owl GO:0043269 biolink:NamedThing regulation of monoatomic ion transport Any process that modulates the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0043270 biolink:NamedThing positive regulation of monoatomic ion transport Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0043271 biolink:NamedThing negative regulation of monoatomic ion transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0043455 biolink:NamedThing regulation of secondary metabolic process Any process that modulates the frequency, rate or extent of secondary metabolism, the chemical reactions and pathways involving compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. NMDCO_relaxed.owl GO:0043467 biolink:NamedThing regulation of generation of precursor metabolites and energy Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and the processes involved in the liberation of energy from these substances. NMDCO_relaxed.owl GO:0043470 biolink:NamedThing regulation of carbohydrate catabolic process Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of carbohydrates. NMDCO_relaxed.owl GO:0043502 biolink:NamedThing regulation of muscle adaptation Any process that modulates the frequency, rate or extent of muscle adaptation. NMDCO_relaxed.owl GO:0043523 biolink:NamedThing regulation of neuron apoptotic process Any process that modulates the occurrence or rate of cell death by apoptotic process in neurons. NMDCO_relaxed.owl GO:0043524 biolink:NamedThing negative regulation of neuron apoptotic process Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons. NMDCO_relaxed.owl GO:0043525 biolink:NamedThing positive regulation of neuron apoptotic process Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptotic process. NMDCO_relaxed.owl GO:0043549 biolink:NamedThing regulation of kinase activity Any process that modulates the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. NMDCO_relaxed.owl GO:0043576 biolink:NamedThing regulation of respiratory gaseous exchange Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment. NMDCO_relaxed.owl GO:0044057 biolink:NamedThing regulation of system process Any process that modulates the frequency, rate or extent of a system process, a multicellular organismal process carried out by any of the organs or tissues in an organ system. NMDCO_relaxed.owl GO:0044058 biolink:NamedThing regulation of digestive system process Any process that modulates the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. NMDCO_relaxed.owl GO:0044060 biolink:NamedThing regulation of endocrine process Any process that modulates the frequency, rate or extent of an endocrine process, a process involving the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system. NMDCO_relaxed.owl GO:0044062 biolink:NamedThing regulation of excretion Any process that modulates the frequency, rate, or extent of excretion, the elimination by an organism of the waste products that arise as a result of metabolic activity. NMDCO_relaxed.owl GO:0044065 biolink:NamedThing regulation of respiratory system process Any process that modulates the frequency, rate or extent of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system. NMDCO_relaxed.owl GO:0044087 biolink:NamedThing regulation of cellular component biogenesis Any process that modulates the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. NMDCO_relaxed.owl GO:0044088 biolink:NamedThing regulation of vacuole organization Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole. NMDCO_relaxed.owl GO:0044089 biolink:NamedThing positive regulation of cellular component biogenesis Any process that activates or increases the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. NMDCO_relaxed.owl GO:0044090 biolink:NamedThing positive regulation of vacuole organization Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole. NMDCO_relaxed.owl GO:0044092 biolink:NamedThing negative regulation of molecular function Any process that stops or reduces the rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding. NMDCO_relaxed.owl GO:0044093 biolink:NamedThing positive regulation of molecular function Any process that activates or increases the rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding. NMDCO_relaxed.owl GO:0045223 biolink:NamedThing regulation of CD4 production Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4. NMDCO_relaxed.owl GO:0045224 biolink:NamedThing positive regulation of CD4 production Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4. NMDCO_relaxed.owl GO:0045225 biolink:NamedThing negative regulation of CD4 production Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4. NMDCO_relaxed.owl GO:0045595 biolink:NamedThing regulation of cell differentiation Any process that modulates the frequency, rate or extent of cell differentiation, the process in which relatively unspecialized cells acquire specialized structural and functional features. NMDCO_relaxed.owl GO:0045596 biolink:NamedThing negative regulation of cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation. NMDCO_relaxed.owl GO:0045597 biolink:NamedThing positive regulation of cell differentiation Any process that activates or increases the frequency, rate or extent of cell differentiation. NMDCO_relaxed.owl GO:0045598 biolink:NamedThing regulation of fat cell differentiation Any process that modulates the frequency, rate or extent of adipocyte differentiation. NMDCO_relaxed.owl GO:0045599 biolink:NamedThing negative regulation of fat cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of adipocyte differentiation. NMDCO_relaxed.owl GO:0045600 biolink:NamedThing positive regulation of fat cell differentiation Any process that activates or increases the frequency, rate or extent of adipocyte differentiation. NMDCO_relaxed.owl GO:0045601 biolink:NamedThing regulation of endothelial cell differentiation Any process that modulates the frequency, rate or extent of endothelial cell differentiation. NMDCO_relaxed.owl GO:0045602 biolink:NamedThing negative regulation of endothelial cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of endothelial cell differentiation. NMDCO_relaxed.owl GO:0045603 biolink:NamedThing positive regulation of endothelial cell differentiation Any process that activates or increases the frequency, rate or extent of endothelial cell differentiation. NMDCO_relaxed.owl GO:0045604 biolink:NamedThing regulation of epidermal cell differentiation Any process that modulates the frequency, rate or extent of epidermal cell differentiation. NMDCO_relaxed.owl GO:0045605 biolink:NamedThing negative regulation of epidermal cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal cell differentiation. NMDCO_relaxed.owl GO:0045606 biolink:NamedThing positive regulation of epidermal cell differentiation Any process that activates or increases the frequency, rate or extent of epidermal cell differentiation. NMDCO_relaxed.owl GO:0045637 biolink:NamedThing regulation of myeloid cell differentiation Any process that modulates the frequency, rate or extent of myeloid cell differentiation. NMDCO_relaxed.owl GO:0045638 biolink:NamedThing negative regulation of myeloid cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of myeloid cell differentiation. NMDCO_relaxed.owl GO:0045639 biolink:NamedThing positive regulation of myeloid cell differentiation Any process that activates or increases the frequency, rate or extent of myeloid cell differentiation. NMDCO_relaxed.owl GO:0045646 biolink:NamedThing regulation of erythrocyte differentiation Any process that modulates the frequency, rate or extent of erythrocyte differentiation. NMDCO_relaxed.owl GO:0045647 biolink:NamedThing negative regulation of erythrocyte differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of erythrocyte differentiation. NMDCO_relaxed.owl GO:0045648 biolink:NamedThing positive regulation of erythrocyte differentiation Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation. NMDCO_relaxed.owl GO:0045652 biolink:NamedThing regulation of megakaryocyte differentiation Any process that modulates the frequency, rate or extent of megakaryocyte differentiation. NMDCO_relaxed.owl GO:0045653 biolink:NamedThing negative regulation of megakaryocyte differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of megakaryocyte differentiation. NMDCO_relaxed.owl GO:0045654 biolink:NamedThing positive regulation of megakaryocyte differentiation Any process that activates or increases the frequency, rate or extent of megakaryocyte differentiation. NMDCO_relaxed.owl GO:0045661 biolink:NamedThing regulation of myoblast differentiation Any process that modulates the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. NMDCO_relaxed.owl GO:0045662 biolink:NamedThing negative regulation of myoblast differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. NMDCO_relaxed.owl GO:0045663 biolink:NamedThing positive regulation of myoblast differentiation Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. NMDCO_relaxed.owl GO:0045664 biolink:NamedThing regulation of neuron differentiation Any process that modulates the frequency, rate or extent of neuron differentiation. NMDCO_relaxed.owl GO:0045665 biolink:NamedThing negative regulation of neuron differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of neuron differentiation. NMDCO_relaxed.owl GO:0045666 biolink:NamedThing positive regulation of neuron differentiation Any process that activates or increases the frequency, rate or extent of neuron differentiation. NMDCO_relaxed.owl GO:0045682 biolink:NamedThing regulation of epidermis development Any process that modulates the frequency, rate or extent of epidermis development. NMDCO_relaxed.owl GO:0045683 biolink:NamedThing negative regulation of epidermis development Any process that stops, prevents, or reduces the frequency, rate or extent of epidermis development. NMDCO_relaxed.owl GO:0045684 biolink:NamedThing positive regulation of epidermis development Any process that activates or increases the frequency, rate or extent of epidermis development. NMDCO_relaxed.owl GO:0045685 biolink:NamedThing regulation of glial cell differentiation Any process that modulates the frequency, rate or extent of glia cell differentiation. NMDCO_relaxed.owl GO:0045686 biolink:NamedThing negative regulation of glial cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of glia cell differentiation. NMDCO_relaxed.owl GO:0045687 biolink:NamedThing positive regulation of glial cell differentiation Any process that activates or increases the frequency, rate or extent of glia cell differentiation. NMDCO_relaxed.owl GO:0045719 biolink:NamedThing negative regulation of glycogen biosynthetic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen. NMDCO_relaxed.owl GO:0045721 biolink:NamedThing negative regulation of gluconeogenesis Any process that stops, prevents, or reduces the frequency, rate or extent of gluconeogenesis. NMDCO_relaxed.owl GO:0045722 biolink:NamedThing positive regulation of gluconeogenesis Any process that activates or increases the frequency, rate or extent of gluconeogenesis. NMDCO_relaxed.owl GO:0045724 biolink:NamedThing positive regulation of cilium assembly Any process that activates or increases the frequency, rate or extent of the formation of a cilium. NMDCO_relaxed.owl GO:0045725 biolink:NamedThing positive regulation of glycogen biosynthetic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen. NMDCO_relaxed.owl GO:0045727 biolink:NamedThing positive regulation of translation Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. NMDCO_relaxed.owl GO:0045732 biolink:NamedThing positive regulation of protein catabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. NMDCO_relaxed.owl GO:0045734 biolink:NamedThing regulation of acetate catabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate, the anion of acetic acid. NMDCO_relaxed.owl GO:0045753 biolink:NamedThing negative regulation of acetate catabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate. NMDCO_relaxed.owl GO:0045754 biolink:NamedThing positive regulation of acetate catabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate. NMDCO_relaxed.owl GO:0045759 biolink:NamedThing negative regulation of action potential Any process that stops, prevents, or reduces the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. NMDCO_relaxed.owl GO:0045760 biolink:NamedThing positive regulation of action potential Any process that activates or increases the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. NMDCO_relaxed.owl GO:0045763 biolink:NamedThing negative regulation of cellular amino acid metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amino acid. NMDCO_relaxed.owl GO:0045764 biolink:NamedThing positive regulation of amino acid metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amino acid. NMDCO_relaxed.owl GO:0045765 biolink:NamedThing regulation of angiogenesis Any process that modulates the frequency, rate or extent of angiogenesis. NMDCO_relaxed.owl GO:0045766 biolink:NamedThing positive regulation of angiogenesis Any process that activates or increases angiogenesis. NMDCO_relaxed.owl GO:0045769 biolink:NamedThing negative regulation of asymmetric cell division Any process that stops, prevents, or reduces the frequency, rate or extent of asymmetric cell division. NMDCO_relaxed.owl GO:0045770 biolink:NamedThing positive regulation of asymmetric cell division Any process that activates or increases the frequency, rate or extent of asymmetric cell division. NMDCO_relaxed.owl GO:0045778 biolink:NamedThing positive regulation of ossification Any process that activates or increases the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance. NMDCO_relaxed.owl GO:0045786 biolink:NamedThing negative regulation of cell cycle Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle. NMDCO_relaxed.owl GO:0045787 biolink:NamedThing positive regulation of cell cycle Any process that activates or increases the rate or extent of progression through the cell cycle. NMDCO_relaxed.owl GO:0045818 biolink:NamedThing negative regulation of glycogen catabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen. NMDCO_relaxed.owl GO:0045819 biolink:NamedThing positive regulation of glycogen catabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen. NMDCO_relaxed.owl GO:0045822 biolink:NamedThing negative regulation of heart contraction Any process that stops, prevents, or reduces the frequency, rate or extent of heart contraction. NMDCO_relaxed.owl GO:0045823 biolink:NamedThing positive regulation of heart contraction Any process that activates or increases the frequency, rate or extent of heart contraction. NMDCO_relaxed.owl GO:0045833 biolink:NamedThing negative regulation of lipid metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipids. NMDCO_relaxed.owl GO:0045834 biolink:NamedThing positive regulation of lipid metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipids. NMDCO_relaxed.owl GO:0045835 biolink:NamedThing negative regulation of meiotic nuclear division Any process that stops, prevents, or reduces the frequency, rate or extent of meiosis. NMDCO_relaxed.owl GO:0045836 biolink:NamedThing positive regulation of meiotic nuclear division Any process that activates or increases the frequency, rate or extent of meiosis. NMDCO_relaxed.owl GO:0045839 biolink:NamedThing negative regulation of mitotic nuclear division Any process that stops, prevents or reduces the rate or extent of mitosis. Mitosis is the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother. NMDCO_relaxed.owl GO:0045840 biolink:NamedThing positive regulation of mitotic nuclear division Any process that activates or increases the frequency, rate or extent of mitosis. NMDCO_relaxed.owl GO:0045843 biolink:NamedThing negative regulation of striated muscle tissue development Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle development. NMDCO_relaxed.owl GO:0045844 biolink:NamedThing positive regulation of striated muscle tissue development Any process that activates or increases the frequency, rate or extent of striated muscle development. NMDCO_relaxed.owl GO:0045900 biolink:NamedThing negative regulation of translational elongation Any process that stops, prevents, or reduces the frequency, rate or extent of translational elongation. NMDCO_relaxed.owl GO:0045901 biolink:NamedThing positive regulation of translational elongation Any process that activates or increases the frequency, rate or extent of translational elongation. NMDCO_relaxed.owl GO:0045904 biolink:NamedThing negative regulation of translational termination Any process that stops, prevents, or reduces the frequency, rate or extent of translational termination. NMDCO_relaxed.owl GO:0045905 biolink:NamedThing positive regulation of translational termination Any process that activates or increases the frequency, rate or extent of translational termination. NMDCO_relaxed.owl GO:0045912 biolink:NamedThing negative regulation of carbohydrate metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving carbohydrate. NMDCO_relaxed.owl GO:0045913 biolink:NamedThing positive regulation of carbohydrate metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving carbohydrate. NMDCO_relaxed.owl GO:0045914 biolink:NamedThing negative regulation of catecholamine metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving catecholamine. NMDCO_relaxed.owl GO:0045915 biolink:NamedThing positive regulation of catecholamine metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving catecholamine. NMDCO_relaxed.owl GO:0045920 biolink:NamedThing negative regulation of exocytosis Any process that stops, prevents, or reduces the frequency, rate or extent of exocytosis. NMDCO_relaxed.owl GO:0045921 biolink:NamedThing positive regulation of exocytosis Any process that activates or increases the frequency, rate or extent of exocytosis. NMDCO_relaxed.owl GO:0045930 biolink:NamedThing negative regulation of mitotic cell cycle Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle. NMDCO_relaxed.owl GO:0045931 biolink:NamedThing positive regulation of mitotic cell cycle Any process that activates or increases the rate or extent of progression through the mitotic cell cycle. NMDCO_relaxed.owl GO:0045932 biolink:NamedThing negative regulation of muscle contraction Any process that stops, prevents, or reduces the frequency, rate or extent of muscle contraction. NMDCO_relaxed.owl GO:0045933 biolink:NamedThing positive regulation of muscle contraction Any process that activates or increases the frequency, rate or extent of muscle contraction. NMDCO_relaxed.owl GO:0045934 biolink:NamedThing negative regulation of nucleobase-containing compound metabolic process Any cellular process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. NMDCO_relaxed.owl GO:0045935 biolink:NamedThing positive regulation of nucleobase-containing compound metabolic process Any cellular process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids. NMDCO_relaxed.owl GO:0045936 biolink:NamedThing negative regulation of phosphate metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving phosphates. NMDCO_relaxed.owl GO:0045937 biolink:NamedThing positive regulation of phosphate metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving phosphates. NMDCO_relaxed.owl GO:0045939 biolink:NamedThing negative regulation of steroid metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving steroids. NMDCO_relaxed.owl GO:0045940 biolink:NamedThing positive regulation of steroid metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving steroids. NMDCO_relaxed.owl GO:0045947 biolink:NamedThing negative regulation of translational initiation Any process that stops, prevents, or reduces the frequency, rate or extent of translational initiation. NMDCO_relaxed.owl GO:0045948 biolink:NamedThing positive regulation of translational initiation Any process that activates or increases the frequency, rate or extent of translational initiation. NMDCO_relaxed.owl GO:0045986 biolink:NamedThing negative regulation of smooth muscle contraction Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle contraction. NMDCO_relaxed.owl GO:0045987 biolink:NamedThing positive regulation of smooth muscle contraction Any process that activates or increases the frequency, rate or extent of smooth muscle contraction. NMDCO_relaxed.owl GO:0045988 biolink:NamedThing negative regulation of striated muscle contraction Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle contraction. NMDCO_relaxed.owl GO:0045989 biolink:NamedThing positive regulation of striated muscle contraction Any process that activates or increases the frequency, rate or extent of striated muscle contraction. NMDCO_relaxed.owl GO:0045992 biolink:NamedThing negative regulation of embryonic development Any process that stops, prevents, or reduces the frequency, rate or extent of embryonic development. NMDCO_relaxed.owl GO:0045995 biolink:NamedThing regulation of embryonic development Any process that modulates the frequency, rate or extent of embryonic development. NMDCO_relaxed.owl GO:0046532 biolink:NamedThing regulation of photoreceptor cell differentiation Any process that modulates the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster. NMDCO_relaxed.owl GO:0046533 biolink:NamedThing negative regulation of photoreceptor cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster. NMDCO_relaxed.owl GO:0046534 biolink:NamedThing positive regulation of photoreceptor cell differentiation Any process that activates or increases the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster. NMDCO_relaxed.owl GO:0046620 biolink:NamedThing regulation of organ growth Any process that modulates the frequency, rate or extent of growth of an organ of an organism. NMDCO_relaxed.owl GO:0046621 biolink:NamedThing negative regulation of organ growth Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organ of an organism. NMDCO_relaxed.owl GO:0046622 biolink:NamedThing positive regulation of organ growth Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism. NMDCO_relaxed.owl GO:0046668 biolink:NamedThing regulation of retinal cell programmed cell death Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina. NMDCO_relaxed.owl GO:0046669 biolink:NamedThing regulation of compound eye retinal cell programmed cell death Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the compound eye retina. NMDCO_relaxed.owl GO:0046670 biolink:NamedThing positive regulation of retinal cell programmed cell death Any process that activates or increases the frequency, rate or extent of programmed cell death that occurs in the retina. NMDCO_relaxed.owl GO:0046671 biolink:NamedThing negative regulation of retinal cell programmed cell death Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the retina. NMDCO_relaxed.owl GO:0046672 biolink:NamedThing positive regulation of compound eye retinal cell programmed cell death Any process that activates or increases the frequency, rate or extent of programmed cell death that occurs in the compound eye retina. NMDCO_relaxed.owl GO:0046673 biolink:NamedThing negative regulation of compound eye retinal cell programmed cell death Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the compound eye retina. NMDCO_relaxed.owl GO:0046676 biolink:NamedThing negative regulation of insulin secretion Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of insulin. NMDCO_relaxed.owl GO:0046883 biolink:NamedThing regulation of hormone secretion Any process that modulates the frequency, rate or extent of the regulated release of a hormone from a cell. NMDCO_relaxed.owl GO:0046887 biolink:NamedThing positive regulation of hormone secretion Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell. NMDCO_relaxed.owl GO:0046888 biolink:NamedThing negative regulation of hormone secretion Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a hormone from a cell. NMDCO_relaxed.owl GO:0046889 biolink:NamedThing positive regulation of lipid biosynthetic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids. NMDCO_relaxed.owl GO:0046890 biolink:NamedThing regulation of lipid biosynthetic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids. NMDCO_relaxed.owl GO:0046928 biolink:NamedThing regulation of neurotransmitter secretion Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell. NMDCO_relaxed.owl GO:0046929 biolink:NamedThing negative regulation of neurotransmitter secretion Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a neurotransmitter. NMDCO_relaxed.owl GO:0048070 biolink:NamedThing regulation of developmental pigmentation Any process that modulates the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism. NMDCO_relaxed.owl GO:0048086 biolink:NamedThing negative regulation of developmental pigmentation Any process that decreases the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism. NMDCO_relaxed.owl GO:0048087 biolink:NamedThing positive regulation of developmental pigmentation Any process that increases the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism. NMDCO_relaxed.owl GO:0048145 biolink:NamedThing regulation of fibroblast proliferation Any process that modulates the frequency, rate or extent of multiplication or reproduction of fibroblast cells. NMDCO_relaxed.owl GO:0048146 biolink:NamedThing positive regulation of fibroblast proliferation Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells. NMDCO_relaxed.owl GO:0048147 biolink:NamedThing negative regulation of fibroblast proliferation Any process that stops, prevents, or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells. NMDCO_relaxed.owl GO:0048209 biolink:NamedThing regulation of vesicle targeting, to, from or within Golgi Any process that modulates the frequency, rate, or destination of vesicle-mediated transport to, from or within the Golgi apparatus. NMDCO_relaxed.owl GO:0048518 biolink:NamedThing positive regulation of biological process Any process that activates or increases the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule. NMDCO_relaxed.owl GO:0048519 biolink:NamedThing negative regulation of biological process Any process that stops, prevents, or reduces the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule. NMDCO_relaxed.owl GO:0048520 biolink:NamedThing positive regulation of behavior Any process that activates or increases the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli. NMDCO_relaxed.owl GO:0048521 biolink:NamedThing negative regulation of behavior Any process that stops, prevents, or reduces the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli. NMDCO_relaxed.owl GO:0048522 biolink:NamedThing positive regulation of cellular process Any process that activates or increases the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. NMDCO_relaxed.owl GO:0048523 biolink:NamedThing negative regulation of cellular process Any process that stops, prevents, or reduces the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. NMDCO_relaxed.owl GO:0048580 biolink:NamedThing regulation of post-embryonic development Any process that modulates the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. NMDCO_relaxed.owl GO:0048581 biolink:NamedThing negative regulation of post-embryonic development Any process that stops, prevents, or reduces the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. NMDCO_relaxed.owl GO:0048582 biolink:NamedThing positive regulation of post-embryonic development Any process that activates or increases the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. NMDCO_relaxed.owl GO:0048583 biolink:NamedThing regulation of response to stimulus Any process that modulates the frequency, rate or extent of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. NMDCO_relaxed.owl GO:0048584 biolink:NamedThing positive regulation of response to stimulus Any process that activates, maintains or increases the rate of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. NMDCO_relaxed.owl GO:0048585 biolink:NamedThing negative regulation of response to stimulus Any process that stops, prevents, or reduces the frequency, rate or extent of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. NMDCO_relaxed.owl GO:0048631 biolink:NamedThing regulation of skeletal muscle tissue growth Any process that modulates the frequency, rate or extent of skeletal muscle growth. NMDCO_relaxed.owl GO:0048632 biolink:NamedThing negative regulation of skeletal muscle tissue growth Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle growth. NMDCO_relaxed.owl GO:0048633 biolink:NamedThing positive regulation of skeletal muscle tissue growth Any process that activates, maintains or increases the rate of skeletal muscle growth. NMDCO_relaxed.owl GO:0048634 biolink:NamedThing regulation of muscle organ development Any process that modulates the frequency, rate or extent of muscle development. NMDCO_relaxed.owl GO:0048635 biolink:NamedThing negative regulation of muscle organ development Any process that stops, prevents, or reduces the frequency, rate or extent of muscle development. NMDCO_relaxed.owl GO:0048636 biolink:NamedThing positive regulation of muscle organ development Any process that activates, maintains or increases the rate of muscle development. NMDCO_relaxed.owl GO:0048639 biolink:NamedThing positive regulation of developmental growth Any process that activates, maintains or increases the rate of developmental growth. NMDCO_relaxed.owl GO:0048640 biolink:NamedThing negative regulation of developmental growth Any process that stops, prevents, or reduces the frequency, rate or extent of developmental growth. NMDCO_relaxed.owl GO:0048641 biolink:NamedThing regulation of skeletal muscle tissue development Any process that modulates the frequency, rate or extent of skeletal muscle tissue development. NMDCO_relaxed.owl GO:0048642 biolink:NamedThing negative regulation of skeletal muscle tissue development Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle tissue development. NMDCO_relaxed.owl GO:0048643 biolink:NamedThing positive regulation of skeletal muscle tissue development Any process that activates, maintains or increases the rate of skeletal muscle tissue development. NMDCO_relaxed.owl GO:0048660 biolink:NamedThing regulation of smooth muscle cell proliferation Any process that modulates the frequency, rate or extent of smooth muscle cell proliferation. NMDCO_relaxed.owl GO:0048661 biolink:NamedThing positive regulation of smooth muscle cell proliferation Any process that activates or increases the rate or extent of smooth muscle cell proliferation. NMDCO_relaxed.owl GO:0048662 biolink:NamedThing negative regulation of smooth muscle cell proliferation Any process that stops, prevents or reduces the rate or extent of smooth muscle cell proliferation. NMDCO_relaxed.owl GO:0048742 biolink:NamedThing regulation of skeletal muscle fiber development Any process that modulates the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. NMDCO_relaxed.owl GO:0048743 biolink:NamedThing positive regulation of skeletal muscle fiber development Any process that activates, maintains or increases the rate of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. NMDCO_relaxed.owl GO:0048744 biolink:NamedThing negative regulation of skeletal muscle fiber development Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast. NMDCO_relaxed.owl GO:0050433 biolink:NamedThing regulation of catecholamine secretion Any process that modulates the frequency, rate or extent of the regulated release of catecholamines. NMDCO_relaxed.owl GO:0050678 biolink:NamedThing regulation of epithelial cell proliferation Any process that modulates the frequency, rate or extent of epithelial cell proliferation. NMDCO_relaxed.owl GO:0050679 biolink:NamedThing positive regulation of epithelial cell proliferation Any process that activates or increases the rate or extent of epithelial cell proliferation. NMDCO_relaxed.owl GO:0050680 biolink:NamedThing negative regulation of epithelial cell proliferation Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation. NMDCO_relaxed.owl GO:0050708 biolink:NamedThing regulation of protein secretion Any process that modulates the frequency, rate or extent of the controlled release of a protein from a cell. NMDCO_relaxed.owl GO:0050709 biolink:NamedThing negative regulation of protein secretion Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a protein from a cell. NMDCO_relaxed.owl GO:0050714 biolink:NamedThing positive regulation of protein secretion Any process that activates or increases the frequency, rate or extent of the controlled release of a protein from a cell. NMDCO_relaxed.owl GO:0050767 biolink:NamedThing regulation of neurogenesis Any process that modulates the frequency, rate or extent of neurogenesis, the generation of cells in the nervous system. NMDCO_relaxed.owl GO:0050768 biolink:NamedThing negative regulation of neurogenesis Any process that stops, prevents, or reduces the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system. NMDCO_relaxed.owl GO:0050769 biolink:NamedThing positive regulation of neurogenesis Any process that activates or increases the frequency, rate or extent of neurogenesis, the generation of cells within the nervous system. NMDCO_relaxed.owl GO:0050776 biolink:NamedThing regulation of immune response Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus. NMDCO_relaxed.owl GO:0050777 biolink:NamedThing negative regulation of immune response Any process that stops, prevents, or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus. NMDCO_relaxed.owl GO:0050778 biolink:NamedThing positive regulation of immune response Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus. NMDCO_relaxed.owl GO:0050789 biolink:NamedThing regulation of biological process Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule. NMDCO_relaxed.owl GO:0050790 biolink:NamedThing regulation of catalytic activity Any process that modulates the activity of an enzyme. NMDCO_relaxed.owl GO:0050793 biolink:NamedThing regulation of developmental process Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). NMDCO_relaxed.owl GO:0050794 biolink:NamedThing regulation of cellular process Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level. NMDCO_relaxed.owl GO:0050795 biolink:NamedThing regulation of behavior Any process that modulates the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli. NMDCO_relaxed.owl GO:0050796 biolink:NamedThing regulation of insulin secretion Any process that modulates the frequency, rate or extent of the regulated release of insulin. NMDCO_relaxed.owl GO:0050803 biolink:NamedThing regulation of synapse structure or activity Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell). NMDCO_relaxed.owl GO:0050804 biolink:NamedThing modulation of chemical synaptic transmission Any process that modulates the frequency or amplitude of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. Amplitude, in this case, refers to the change in postsynaptic membrane potential due to a single instance of synaptic transmission. NMDCO_relaxed.owl GO:0050805 biolink:NamedThing negative regulation of synaptic transmission Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. NMDCO_relaxed.owl GO:0050806 biolink:NamedThing positive regulation of synaptic transmission Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse. NMDCO_relaxed.owl GO:0050810 biolink:NamedThing regulation of steroid biosynthetic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. NMDCO_relaxed.owl GO:0050878 biolink:NamedThing regulation of body fluid levels Any process that modulates the levels of body fluids. NMDCO_relaxed.owl GO:0050932 biolink:NamedThing regulation of pigment cell differentiation Any process that modulates the frequency, rate or extent of pigmented cell differentiation. NMDCO_relaxed.owl GO:0050941 biolink:NamedThing negative regulation of pigment cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of pigment cell differentiation. NMDCO_relaxed.owl GO:0050942 biolink:NamedThing positive regulation of pigment cell differentiation Any process that activates or increases the frequency, rate or extent of pigment cell differentiation. NMDCO_relaxed.owl GO:0050994 biolink:NamedThing regulation of lipid catabolic process Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of lipids. NMDCO_relaxed.owl GO:0050995 biolink:NamedThing negative regulation of lipid catabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids. NMDCO_relaxed.owl GO:0050996 biolink:NamedThing positive regulation of lipid catabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids. NMDCO_relaxed.owl GO:0051046 biolink:NamedThing regulation of secretion Any process that modulates the frequency, rate or extent of the controlled release of a substance from a cell or a tissue. NMDCO_relaxed.owl GO:0051047 biolink:NamedThing positive regulation of secretion Any process that activates or increases the frequency, rate or extent of the controlled release of a substance from a cell or a tissue. NMDCO_relaxed.owl GO:0051048 biolink:NamedThing negative regulation of secretion Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a substance from a cell or a tissue. NMDCO_relaxed.owl GO:0051049 biolink:NamedThing regulation of transport Any process that modulates the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051050 biolink:NamedThing positive regulation of transport Any process that activates or increases the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051051 biolink:NamedThing negative regulation of transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051052 biolink:NamedThing regulation of DNA metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving DNA. NMDCO_relaxed.owl GO:0051053 biolink:NamedThing negative regulation of DNA metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving DNA. NMDCO_relaxed.owl GO:0051054 biolink:NamedThing positive regulation of DNA metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving DNA. NMDCO_relaxed.owl GO:0051055 biolink:NamedThing negative regulation of lipid biosynthetic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids. NMDCO_relaxed.owl GO:0051093 biolink:NamedThing negative regulation of developmental process Any process that stops, prevents or reduces the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). NMDCO_relaxed.owl GO:0051094 biolink:NamedThing positive regulation of developmental process Any process that activates or increases the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). NMDCO_relaxed.owl GO:0051147 biolink:NamedThing regulation of muscle cell differentiation Any process that modulates the frequency, rate or extent of muscle cell differentiation. NMDCO_relaxed.owl GO:0051148 biolink:NamedThing negative regulation of muscle cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of muscle cell differentiation. NMDCO_relaxed.owl GO:0051149 biolink:NamedThing positive regulation of muscle cell differentiation Any process that activates or increases the frequency, rate or extent of muscle cell differentiation. NMDCO_relaxed.owl GO:0051150 biolink:NamedThing regulation of smooth muscle cell differentiation Any process that modulates the frequency, rate or extent of smooth muscle cell differentiation. NMDCO_relaxed.owl GO:0051151 biolink:NamedThing negative regulation of smooth muscle cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle cell differentiation. NMDCO_relaxed.owl GO:0051152 biolink:NamedThing positive regulation of smooth muscle cell differentiation Any process that activates or increases the frequency, rate or extent of smooth muscle cell differentiation. NMDCO_relaxed.owl GO:0051153 biolink:NamedThing regulation of striated muscle cell differentiation Any process that modulates the frequency, rate or extent of striated muscle cell differentiation. NMDCO_relaxed.owl GO:0051154 biolink:NamedThing negative regulation of striated muscle cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle cell differentiation. NMDCO_relaxed.owl GO:0051155 biolink:NamedThing positive regulation of striated muscle cell differentiation Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation. NMDCO_relaxed.owl GO:0051171 biolink:NamedThing regulation of nitrogen compound metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nitrogen or nitrogenous compounds. NMDCO_relaxed.owl GO:0051172 biolink:NamedThing negative regulation of nitrogen compound metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nitrogen or nitrogenous compounds. NMDCO_relaxed.owl GO:0051173 biolink:NamedThing positive regulation of nitrogen compound metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nitrogen or nitrogenous compounds. NMDCO_relaxed.owl GO:0051174 biolink:NamedThing regulation of phosphorus metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving phosphorus or compounds containing phosphorus. NMDCO_relaxed.owl GO:0051175 biolink:NamedThing negative regulation of sulfur metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur. NMDCO_relaxed.owl GO:0051176 biolink:NamedThing positive regulation of sulfur metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur. NMDCO_relaxed.owl GO:0051222 biolink:NamedThing positive regulation of protein transport Any process that activates or increases the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051223 biolink:NamedThing regulation of protein transport Any process that modulates the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051224 biolink:NamedThing negative regulation of protein transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051239 biolink:NamedThing regulation of multicellular organismal process Any process that modulates the frequency, rate or extent of a multicellular organismal process, the processes pertinent to the function of a multicellular organism above the cellular level; includes the integrated processes of tissues and organs. NMDCO_relaxed.owl GO:0051240 biolink:NamedThing positive regulation of multicellular organismal process Any process that activates or increases the frequency, rate or extent of an organismal process, any of the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs. NMDCO_relaxed.owl GO:0051241 biolink:NamedThing negative regulation of multicellular organismal process Any process that stops, prevents, or reduces the frequency, rate or extent of an organismal process, the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs. NMDCO_relaxed.owl GO:0051246 biolink:NamedThing regulation of protein metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein. NMDCO_relaxed.owl GO:0051247 biolink:NamedThing positive regulation of protein metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a protein. NMDCO_relaxed.owl GO:0051248 biolink:NamedThing negative regulation of protein metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways involving a protein. NMDCO_relaxed.owl GO:0051252 biolink:NamedThing regulation of RNA metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving RNA. NMDCO_relaxed.owl GO:0051253 biolink:NamedThing negative regulation of RNA metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving RNA. NMDCO_relaxed.owl GO:0051254 biolink:NamedThing positive regulation of RNA metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving RNA. NMDCO_relaxed.owl GO:0051302 biolink:NamedThing regulation of cell division Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells. NMDCO_relaxed.owl GO:0051336 biolink:NamedThing regulation of hydrolase activity Any process that modulates the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. NMDCO_relaxed.owl GO:0051338 biolink:NamedThing regulation of transferase activity Any process that modulates the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. NMDCO_relaxed.owl GO:0051345 biolink:NamedThing positive regulation of hydrolase activity Any process that activates or increases the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds. NMDCO_relaxed.owl GO:0051346 biolink:NamedThing negative regulation of hydrolase activity Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds. NMDCO_relaxed.owl GO:0051347 biolink:NamedThing positive regulation of transferase activity Any process that activates or increases the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor. NMDCO_relaxed.owl GO:0051348 biolink:NamedThing negative regulation of transferase activity Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor. NMDCO_relaxed.owl GO:0051445 biolink:NamedThing regulation of meiotic cell cycle Any process that modulates the rate or extent of progression through the meiotic cell cycle. NMDCO_relaxed.owl GO:0051446 biolink:NamedThing positive regulation of meiotic cell cycle Any process that activates or increases the frequency, rate or extent of progression through the meiotic cell cycle. NMDCO_relaxed.owl GO:0051447 biolink:NamedThing negative regulation of meiotic cell cycle Any process that stops, prevents or reduces the rate or extent of progression through the meiotic cell cycle. NMDCO_relaxed.owl GO:0051493 biolink:NamedThing regulation of cytoskeleton organization Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures. NMDCO_relaxed.owl GO:0051494 biolink:NamedThing negative regulation of cytoskeleton organization Any process that stops, prevents, or reduces the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures. NMDCO_relaxed.owl GO:0051495 biolink:NamedThing positive regulation of cytoskeleton organization Any process that activates or increases the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures. NMDCO_relaxed.owl GO:0051588 biolink:NamedThing regulation of neurotransmitter transport Any process that modulates the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051589 biolink:NamedThing negative regulation of neurotransmitter transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051590 biolink:NamedThing positive regulation of neurotransmitter transport Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051621 biolink:NamedThing regulation of norepinephrine uptake Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter norepinephrine into a cell. NMDCO_relaxed.owl GO:0051622 biolink:NamedThing negative regulation of norepinephrine uptake Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of norepinephrine into a cell. NMDCO_relaxed.owl GO:0051623 biolink:NamedThing positive regulation of norepinephrine uptake Any process that activates or increases the frequency, rate or extent of the directed movement of norepinephrine into a cell. NMDCO_relaxed.owl GO:0051631 biolink:NamedThing regulation of acetylcholine uptake Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter acetylcholine into a cell. NMDCO_relaxed.owl GO:0051632 biolink:NamedThing negative regulation of acetylcholine uptake Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of acetylcholine into a cell. NMDCO_relaxed.owl GO:0051633 biolink:NamedThing positive regulation of acetylcholine uptake Any process that activates or increases the frequency, rate or extent of the directed movement of acetylcholine into a cell. NMDCO_relaxed.owl GO:0051726 biolink:NamedThing regulation of cell cycle Any process that modulates the rate or extent of progression through the cell cycle. NMDCO_relaxed.owl GO:0051781 biolink:NamedThing positive regulation of cell division Any process that activates or increases the frequency, rate or extent of cell division. NMDCO_relaxed.owl GO:0051782 biolink:NamedThing negative regulation of cell division Any process that stops, prevents, or reduces the frequency, rate or extent of cell division. NMDCO_relaxed.owl GO:0051783 biolink:NamedThing regulation of nuclear division Any process that modulates the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information. NMDCO_relaxed.owl GO:0051784 biolink:NamedThing negative regulation of nuclear division Any process that stops, prevents, or reduces the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information. NMDCO_relaxed.owl GO:0051785 biolink:NamedThing positive regulation of nuclear division Any process that activates or increases the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information. NMDCO_relaxed.owl GO:0051890 biolink:NamedThing regulation of cardioblast differentiation Any process that modulates the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. NMDCO_relaxed.owl GO:0051891 biolink:NamedThing positive regulation of cardioblast differentiation Any process that activates or increases the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. NMDCO_relaxed.owl GO:0051892 biolink:NamedThing negative regulation of cardioblast differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. NMDCO_relaxed.owl GO:0051930 biolink:NamedThing regulation of sensory perception of pain Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. NMDCO_relaxed.owl GO:0051931 biolink:NamedThing regulation of sensory perception Any process that modulates the frequency, rate or extent of sensory perception, the series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal. NMDCO_relaxed.owl GO:0051952 biolink:NamedThing regulation of amine transport Any process that modulates the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051953 biolink:NamedThing negative regulation of amine transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051954 biolink:NamedThing positive regulation of amine transport Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051955 biolink:NamedThing regulation of amino acid transport Any process that modulates the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051956 biolink:NamedThing negative regulation of amino acid transport Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051957 biolink:NamedThing positive regulation of amino acid transport Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051960 biolink:NamedThing regulation of nervous system development Any process that modulates the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue. NMDCO_relaxed.owl GO:0051961 biolink:NamedThing negative regulation of nervous system development Any process that stops, prevents, or reduces the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue. NMDCO_relaxed.owl GO:0051962 biolink:NamedThing positive regulation of nervous system development Any process that activates, maintains or increases the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue. NMDCO_relaxed.owl GO:0051963 biolink:NamedThing regulation of synapse assembly Any process that modulates the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse. NMDCO_relaxed.owl GO:0051964 biolink:NamedThing negative regulation of synapse assembly Any process that stops, prevents, or reduces the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse. NMDCO_relaxed.owl GO:0051965 biolink:NamedThing positive regulation of synapse assembly Any process that activates, maintains or increases the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse. NMDCO_relaxed.owl GO:0051969 biolink:NamedThing regulation of transmission of nerve impulse Any process that modulates the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation. NMDCO_relaxed.owl GO:0051970 biolink:NamedThing negative regulation of transmission of nerve impulse Any process that stops, prevents, or reduces the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation. NMDCO_relaxed.owl GO:0051971 biolink:NamedThing positive regulation of transmission of nerve impulse Any process that activates, maintains or increases the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation. NMDCO_relaxed.owl GO:0051983 biolink:NamedThing regulation of chromosome segregation Any process that modulates the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. NMDCO_relaxed.owl GO:0051984 biolink:NamedThing positive regulation of chromosome segregation Any process that activates or increases the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. NMDCO_relaxed.owl GO:0051985 biolink:NamedThing negative regulation of chromosome segregation Any process that stops, prevents, or reduces the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets. NMDCO_relaxed.owl GO:0055018 biolink:NamedThing regulation of cardiac muscle fiber development Any process that modulates the frequency, rate or extent of cardiac muscle fiber development. NMDCO_relaxed.owl GO:0055019 biolink:NamedThing negative regulation of cardiac muscle fiber development Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle fiber development. NMDCO_relaxed.owl GO:0055020 biolink:NamedThing positive regulation of cardiac muscle fiber development Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle fiber development. NMDCO_relaxed.owl GO:0055021 biolink:NamedThing regulation of cardiac muscle tissue growth Any process that modulates the frequency, rate or extent of cardiac muscle growth. NMDCO_relaxed.owl GO:0055022 biolink:NamedThing negative regulation of cardiac muscle tissue growth Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle growth. NMDCO_relaxed.owl GO:0055023 biolink:NamedThing positive regulation of cardiac muscle tissue growth Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle growth. NMDCO_relaxed.owl GO:0055024 biolink:NamedThing regulation of cardiac muscle tissue development Any process that modulates the frequency, rate or extent of cardiac muscle tissue development. NMDCO_relaxed.owl GO:0055025 biolink:NamedThing positive regulation of cardiac muscle tissue development Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle tissue development. NMDCO_relaxed.owl GO:0055026 biolink:NamedThing negative regulation of cardiac muscle tissue development Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle tissue development. NMDCO_relaxed.owl GO:0055117 biolink:NamedThing regulation of cardiac muscle contraction Any process that modulates the frequency, rate or extent of cardiac muscle contraction. NMDCO_relaxed.owl GO:0055118 biolink:NamedThing negative regulation of cardiac muscle contraction Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle contraction. NMDCO_relaxed.owl GO:0060043 biolink:NamedThing regulation of cardiac muscle cell proliferation Any process that modulates the frequency, rate or extent of cardiac muscle cell proliferation. NMDCO_relaxed.owl GO:0060044 biolink:NamedThing negative regulation of cardiac muscle cell proliferation Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell proliferation. NMDCO_relaxed.owl GO:0060045 biolink:NamedThing positive regulation of cardiac muscle cell proliferation Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation. NMDCO_relaxed.owl GO:0060143 biolink:NamedThing positive regulation of syncytium formation by plasma membrane fusion Any process that increases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells. NMDCO_relaxed.owl GO:0060251 biolink:NamedThing regulation of glial cell proliferation Any process that modulates the frequency, rate or extent of glial cell proliferation. NMDCO_relaxed.owl GO:0060252 biolink:NamedThing positive regulation of glial cell proliferation Any process that activates or increases the rate or extent of glial cell proliferation. NMDCO_relaxed.owl GO:0060253 biolink:NamedThing negative regulation of glial cell proliferation Any process that stops or decreases the rate or extent of glial cell proliferation. NMDCO_relaxed.owl GO:0060255 biolink:NamedThing regulation of macromolecule metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. NMDCO_relaxed.owl GO:0060281 biolink:NamedThing regulation of oocyte development Any process that modulates the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl GO:0060282 biolink:NamedThing positive regulation of oocyte development Any process that increases the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl GO:0060283 biolink:NamedThing negative regulation of oocyte development Any process that decreases the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl GO:0060284 biolink:NamedThing regulation of cell development Any process that modulates the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. NMDCO_relaxed.owl GO:0060297 biolink:NamedThing regulation of sarcomere organization Any process that modulates the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. NMDCO_relaxed.owl GO:0060298 biolink:NamedThing positive regulation of sarcomere organization Any process that increases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. NMDCO_relaxed.owl GO:0060299 biolink:NamedThing negative regulation of sarcomere organization Any process that decreases the rate, frequency or extent of myofibril assembly by organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs. NMDCO_relaxed.owl GO:0060341 biolink:NamedThing regulation of cellular localization Any process that modulates the frequency, rate or extent of a process in which a cell, a substance, or a cellular entity is transported to, or maintained in a specific location within or in the membrane of a cell. NMDCO_relaxed.owl GO:0060408 biolink:NamedThing regulation of acetylcholine metabolic process Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. NMDCO_relaxed.owl GO:0060409 biolink:NamedThing positive regulation of acetylcholine metabolic process Any process that increases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. NMDCO_relaxed.owl GO:0060410 biolink:NamedThing negative regulation of acetylcholine metabolic process Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. NMDCO_relaxed.owl GO:0060420 biolink:NamedThing regulation of heart growth Any process that modulates the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart. NMDCO_relaxed.owl GO:0060421 biolink:NamedThing positive regulation of heart growth Any process that increases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart. NMDCO_relaxed.owl GO:0060450 biolink:NamedThing positive regulation of hindgut contraction Any process that increases the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine. NMDCO_relaxed.owl GO:0060451 biolink:NamedThing negative regulation of hindgut contraction Any process that decreases the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine. NMDCO_relaxed.owl GO:0060452 biolink:NamedThing positive regulation of cardiac muscle contraction Any process that increases the frequency, rate or extent of cardiac muscle contraction. NMDCO_relaxed.owl GO:0060453 biolink:NamedThing regulation of gastric acid secretion Any process that modulates the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. NMDCO_relaxed.owl GO:0060454 biolink:NamedThing positive regulation of gastric acid secretion Any process that increases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. NMDCO_relaxed.owl GO:0060455 biolink:NamedThing negative regulation of gastric acid secretion Any process that decreases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. NMDCO_relaxed.owl GO:0060456 biolink:NamedThing positive regulation of digestive system process Any process that increases the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. NMDCO_relaxed.owl GO:0060457 biolink:NamedThing negative regulation of digestive system process Any process that decreases the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. NMDCO_relaxed.owl GO:0060467 biolink:NamedThing negative regulation of fertilization Any process that decreases the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy). NMDCO_relaxed.owl GO:0060491 biolink:NamedThing regulation of cell projection assembly Any process that modulates the rate, frequency, or extent of cell projection assembly. NMDCO_relaxed.owl GO:0060501 biolink:NamedThing positive regulation of epithelial cell proliferation involved in lung morphogenesis Any process that increases the rate or frequency of epithelial cell proliferation that results in the lung attaining its shape. NMDCO_relaxed.owl GO:0060623 biolink:NamedThing regulation of chromosome condensation Any process that modulates the rate, frequency, or extent of chromosome condensation, the progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells. NMDCO_relaxed.owl GO:0060627 biolink:NamedThing regulation of vesicle-mediated transport Any process that modulates the rate, frequency, or extent of vesicle-mediated transport, the directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell. NMDCO_relaxed.owl GO:0060632 biolink:NamedThing regulation of microtubule-based movement Any process that modulates the rate, frequency, or extent of microtubule-based movement, the movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins. NMDCO_relaxed.owl GO:0060688 biolink:NamedThing regulation of morphogenesis of a branching structure Any process that modulates the rate, frequency, or extent of branching morphogenesis, the process in which the anatomical structures of branches are generated and organized. NMDCO_relaxed.owl GO:0061035 biolink:NamedThing regulation of cartilage development Any process that modulates the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. NMDCO_relaxed.owl GO:0061036 biolink:NamedThing positive regulation of cartilage development Any process that increases the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. NMDCO_relaxed.owl GO:0061037 biolink:NamedThing negative regulation of cartilage development Any process that decreases the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate. NMDCO_relaxed.owl GO:0061046 biolink:NamedThing regulation of branching involved in lung morphogenesis Any process that modulates the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. NMDCO_relaxed.owl GO:0061047 biolink:NamedThing positive regulation of branching involved in lung morphogenesis Any process that increases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. NMDCO_relaxed.owl GO:0061048 biolink:NamedThing negative regulation of branching involved in lung morphogenesis Any process that decreases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. NMDCO_relaxed.owl GO:0061050 biolink:NamedThing regulation of cell growth involved in cardiac muscle cell development Any process that modulates the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. NMDCO_relaxed.owl GO:0061051 biolink:NamedThing positive regulation of cell growth involved in cardiac muscle cell development Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. NMDCO_relaxed.owl GO:0061052 biolink:NamedThing negative regulation of cell growth involved in cardiac muscle cell development Any process that decreases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state. NMDCO_relaxed.owl GO:0061062 biolink:NamedThing regulation of nematode larval development Any process that modulates the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew. NMDCO_relaxed.owl GO:0061063 biolink:NamedThing positive regulation of nematode larval development Any process that increases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew. NMDCO_relaxed.owl GO:0061064 biolink:NamedThing negative regulation of nematode larval development Any process that decreases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew. NMDCO_relaxed.owl GO:0061074 biolink:NamedThing regulation of neural retina development Any process that modulates the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. NMDCO_relaxed.owl GO:0061075 biolink:NamedThing positive regulation of neural retina development Any process that increases the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. NMDCO_relaxed.owl GO:0061076 biolink:NamedThing negative regulation of neural retina development Any process that decreases the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells. NMDCO_relaxed.owl GO:0061105 biolink:NamedThing regulation of stomach neuroendocrine cell differentiation Any process that modulates the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach. NMDCO_relaxed.owl GO:0061106 biolink:NamedThing negative regulation of stomach neuroendocrine cell differentiation Any process that decreases the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach. NMDCO_relaxed.owl GO:0061117 biolink:NamedThing negative regulation of heart growth Any process that decreases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart. NMDCO_relaxed.owl GO:0061181 biolink:NamedThing regulation of chondrocyte development Any process that modulates the rate, frequency, or extent of the process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate. NMDCO_relaxed.owl GO:0061182 biolink:NamedThing negative regulation of chondrocyte development Any process that decreases the rate, frequency, or extent of the process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate. NMDCO_relaxed.owl GO:0061183 biolink:NamedThing regulation of dermatome development Any process that modulates the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. NMDCO_relaxed.owl GO:0061184 biolink:NamedThing positive regulation of dermatome development Any process that increases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. NMDCO_relaxed.owl GO:0061185 biolink:NamedThing negative regulation of dermatome development Any process that decreases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin. NMDCO_relaxed.owl GO:0061189 biolink:NamedThing positive regulation of sclerotome development Any process that increases the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra. NMDCO_relaxed.owl GO:0061190 biolink:NamedThing regulation of sclerotome development Any process that modulates the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra. NMDCO_relaxed.owl GO:0061469 biolink:NamedThing regulation of type B pancreatic cell proliferation Any process that modulates the frequency, rate or extent of type B pancreatic cell proliferation. NMDCO_relaxed.owl GO:0062012 biolink:NamedThing regulation of small molecule metabolic process Any process that modulates the rate, frequency or extent of a small molecule metabolic process. NMDCO_relaxed.owl GO:0062013 biolink:NamedThing positive regulation of small molecule metabolic process Any process that activates or increases the frequency, rate or extent of a small molecule metabolic process. NMDCO_relaxed.owl GO:0062014 biolink:NamedThing negative regulation of small molecule metabolic process Any process that stops, prevents or reduces the frequency, rate or extent of a small molecule metabolic process. NMDCO_relaxed.owl GO:0062033 biolink:NamedThing positive regulation of mitotic sister chromatid segregation Any process that starts or increases the frequency, rate or extent of sister chromatid segregation during mitosis. NMDCO_relaxed.owl GO:0065009 biolink:NamedThing regulation of molecular function Any process that modulates the frequency, rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding. NMDCO_relaxed.owl GO:0070092 biolink:NamedThing regulation of glucagon secretion Any process that modulates the frequency, rate or extent of the regulated release of glucagon. NMDCO_relaxed.owl GO:0070093 biolink:NamedThing negative regulation of glucagon secretion Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of glucagon. NMDCO_relaxed.owl GO:0070094 biolink:NamedThing positive regulation of glucagon secretion Any process that activates or increases the frequency, rate or extent of the regulated release of glucagon. NMDCO_relaxed.owl GO:0070201 biolink:NamedThing regulation of establishment of protein localization Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location. NMDCO_relaxed.owl GO:0070202 biolink:NamedThing regulation of establishment of protein localization to chromosome Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location on a chromosome. NMDCO_relaxed.owl GO:0070255 biolink:NamedThing regulation of mucus secretion Any process that modulates the frequency, rate or extent of the regulated release of mucus from a cell or a tissue. NMDCO_relaxed.owl GO:0070256 biolink:NamedThing negative regulation of mucus secretion Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of mucus from a cell or a tissue. NMDCO_relaxed.owl GO:0070257 biolink:NamedThing positive regulation of mucus secretion Any process that activates or increases the frequency, rate or extent of the regulated release of mucus from a cell or a tissue. NMDCO_relaxed.owl GO:0070344 biolink:NamedThing regulation of fat cell proliferation Any process that modulates the frequency, rate or extent of fat cell proliferation. NMDCO_relaxed.owl GO:0070345 biolink:NamedThing negative regulation of fat cell proliferation Any process that stops or decreases the rate or extent of fat cell proliferation. NMDCO_relaxed.owl GO:0070346 biolink:NamedThing positive regulation of fat cell proliferation Any process that activates or increases the rate or extent of fat cell proliferation. NMDCO_relaxed.owl GO:0070366 biolink:NamedThing regulation of hepatocyte differentiation Any process that modulates the frequency, rate or extent of hepatocyte differentiation. NMDCO_relaxed.owl GO:0070367 biolink:NamedThing negative regulation of hepatocyte differentiation Any process that stops or decreases the rate or extent of hepatocyte differentiation. NMDCO_relaxed.owl GO:0070368 biolink:NamedThing positive regulation of hepatocyte differentiation Any process that activates or increases the rate or extent of hepatocyte differentiation. NMDCO_relaxed.owl GO:0070507 biolink:NamedThing regulation of microtubule cytoskeleton organization Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. NMDCO_relaxed.owl GO:0070663 biolink:NamedThing regulation of leukocyte proliferation Any process that modulates the frequency, rate or extent of leukocyte proliferation. NMDCO_relaxed.owl GO:0070664 biolink:NamedThing negative regulation of leukocyte proliferation Any process that stops, prevents, or reduces the frequency, rate or extent of leukocyte proliferation. NMDCO_relaxed.owl GO:0070665 biolink:NamedThing positive regulation of leukocyte proliferation Any process that activates or increases the frequency, rate or extent of leukocyte proliferation. NMDCO_relaxed.owl GO:0070857 biolink:NamedThing regulation of bile acid biosynthetic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids. NMDCO_relaxed.owl GO:0070858 biolink:NamedThing negative regulation of bile acid biosynthetic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids. NMDCO_relaxed.owl GO:0070859 biolink:NamedThing positive regulation of bile acid biosynthetic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids. NMDCO_relaxed.owl GO:0070873 biolink:NamedThing regulation of glycogen metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glycogen. NMDCO_relaxed.owl GO:0070874 biolink:NamedThing negative regulation of glycogen metabolic process Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving glycogen. NMDCO_relaxed.owl GO:0070875 biolink:NamedThing positive regulation of glycogen metabolic process Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving glycogen. NMDCO_relaxed.owl GO:0072091 biolink:NamedThing regulation of stem cell proliferation Any process that modulates the frequency, rate or extent of stem cell proliferation. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. NMDCO_relaxed.owl GO:0072201 biolink:NamedThing negative regulation of mesenchymal cell proliferation Any process that decreases the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. NMDCO_relaxed.owl GO:0080090 biolink:NamedThing regulation of primary metabolic process Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism involving those compounds formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism. NMDCO_relaxed.owl GO:0080134 biolink:NamedThing regulation of response to stress Any process that modulates the frequency, rate or extent of a response to stress. Response to stress is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation). NMDCO_relaxed.owl GO:0080154 biolink:NamedThing regulation of fertilization Any process that modulates the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy). NMDCO_relaxed.owl GO:0090063 biolink:NamedThing positive regulation of microtubule nucleation Any process that increases the rate, frequency or extent of microtubule nucleation. Microtubule nucleation is the 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell. NMDCO_relaxed.owl GO:0090068 biolink:NamedThing positive regulation of cell cycle process Any process that increases the rate, frequency or extent of a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. NMDCO_relaxed.owl GO:0090069 biolink:NamedThing regulation of ribosome biogenesis Any process that modulates the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits. NMDCO_relaxed.owl GO:0090070 biolink:NamedThing positive regulation of ribosome biogenesis Any process that increases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits. NMDCO_relaxed.owl GO:0090071 biolink:NamedThing negative regulation of ribosome biogenesis Any process that decreases the rate, frequency or extent of ribosome biogenesis. Ribosome biogenesis is the cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits. NMDCO_relaxed.owl GO:0090087 biolink:NamedThing regulation of peptide transport Any process that modulates the frequency, rate or extent of the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0090091 biolink:NamedThing positive regulation of extracellular matrix disassembly Any process that increases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix. NMDCO_relaxed.owl GO:0090170 biolink:NamedThing regulation of Golgi inheritance Any process that modulates the rate, frequency or extent of Golgi inheritance. Golgi inheritance is the partitioning of Golgi apparatus between daughter cells at cell division. NMDCO_relaxed.owl GO:0090257 biolink:NamedThing regulation of muscle system process Any process that modulates the frequency, rate or extent of a muscle system process, a multicellular organismal process carried out by any of the organs or tissues in a muscle system. NMDCO_relaxed.owl GO:0090273 biolink:NamedThing regulation of somatostatin secretion Any process that modulates the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas. NMDCO_relaxed.owl GO:0090274 biolink:NamedThing positive regulation of somatostatin secretion Any process that increases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas. NMDCO_relaxed.owl GO:0090275 biolink:NamedThing negative regulation of somatostatin secretion Any process that decreases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas. NMDCO_relaxed.owl GO:0090276 biolink:NamedThing regulation of peptide hormone secretion Any process that modulates the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules. NMDCO_relaxed.owl GO:0090277 biolink:NamedThing positive regulation of peptide hormone secretion Any process that increases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules. NMDCO_relaxed.owl GO:0090278 biolink:NamedThing negative regulation of peptide hormone secretion Any process that decreases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules. NMDCO_relaxed.owl GO:0090299 biolink:NamedThing regulation of neural crest formation Any process that modulates the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds. NMDCO_relaxed.owl GO:0090300 biolink:NamedThing positive regulation of neural crest formation Any process that increases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation procedes. NMDCO_relaxed.owl GO:0090301 biolink:NamedThing negative regulation of neural crest formation Any process that decreases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation procedes. NMDCO_relaxed.owl GO:0090316 biolink:NamedThing positive regulation of intracellular protein transport Any process that activates or increases the frequency, rate or extent of the directed movement of proteins within cells. NMDCO_relaxed.owl GO:0090317 biolink:NamedThing negative regulation of intracellular protein transport Any process that decreases the frequency, rate or extent of the directed movement of proteins within cells. NMDCO_relaxed.owl GO:0090325 biolink:NamedThing regulation of locomotion involved in locomotory behavior Any process that modulates the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement. NMDCO_relaxed.owl GO:0090327 biolink:NamedThing negative regulation of locomotion involved in locomotory behavior Any process that decreases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement. NMDCO_relaxed.owl GO:0098801 biolink:NamedThing regulation of renal system process Any process that modulates the frequency, rate or extent of a system process, a multicellular organismal process carried out by the renal system. NMDCO_relaxed.owl GO:0099174 biolink:NamedThing regulation of presynapse organization Any process that modulates the physical form of a presynapse. NMDCO_relaxed.owl GO:0099175 biolink:NamedThing regulation of postsynapse organization Any process that modulates the physical form of a postsynapse. NMDCO_relaxed.owl GO:0099177 biolink:NamedThing regulation of trans-synaptic signaling Any process that modulates the frequency, rate or extent of trans-synaptic signaling. NMDCO_relaxed.owl GO:0099547 biolink:NamedThing regulation of translation at synapse, modulating synaptic transmission Any process that modulates synaptic transmission by regulating translation occurring at the synapse. NMDCO_relaxed.owl GO:0099574 biolink:NamedThing regulation of protein catabolic process at synapse, modulating synaptic transmission Any process that modulates synaptic transmission by regulating protein degradation at the synapse. NMDCO_relaxed.owl GO:0099577 biolink:NamedThing regulation of translation at presynapse, modulating synaptic transmission Any process that modulates synaptic transmission by regulating translation occurring at the presynapse. NMDCO_relaxed.owl GO:0099578 biolink:NamedThing regulation of translation at postsynapse, modulating synaptic transmission Any process that modulates synaptic transmission by regulating translation occurring at the postsynapse. NMDCO_relaxed.owl GO:0106214 biolink:NamedThing regulation of vesicle fusion with Golgi apparatus Any process that modulates the frequency, rate or extent of vesicle fusion with Golgi apparatus. NMDCO_relaxed.owl GO:0106215 biolink:NamedThing negative regulation of vesicle fusion with Golgi apparatus Any process that stops, prevents or reduces the frequency, rate or extent of vesicle fustion with Golgi apparatus. NMDCO_relaxed.owl GO:0106216 biolink:NamedThing positive regulation of vesicle fusion with Golgi apparatus Any process that activates or increases the frequency, rate or extent of vesicle fusion with Golgi apparatus. NMDCO_relaxed.owl GO:0110011 biolink:NamedThing regulation of basement membrane organization Any process that modulates the frequency, rate or extent of the assembly, disassembly or arrangement of constituent parts of the basement membrane. NMDCO_relaxed.owl GO:0110020 biolink:NamedThing regulation of actomyosin structure organization Any process that modulates the frequency, rate or extent of the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin. NMDCO_relaxed.owl GO:0110022 biolink:NamedThing regulation of cardiac muscle myoblast proliferation Any process that modulates the frequency, rate or extent of cardiac muscle myoblast proliferation. NMDCO_relaxed.owl GO:0110023 biolink:NamedThing negative regulation of cardiac muscle myoblast proliferation Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle myoblast proliferation. NMDCO_relaxed.owl GO:0110024 biolink:NamedThing positive regulation of cardiac muscle myoblast proliferation Any process that activates or increases the frequency, rate or extent of cardiac muscle myoblast proliferation. NMDCO_relaxed.owl GO:0110053 biolink:NamedThing regulation of actin filament organization Any process that modulates the frequency, rate or extent of actin filament organization. NMDCO_relaxed.owl GO:0110057 biolink:NamedThing regulation of blood vessel endothelial cell differentiation Any process that modulates the frequency, rate or extent of blood vessel endothelial cell differentiation. NMDCO_relaxed.owl GO:0110058 biolink:NamedThing positive regulation of blood vessel endothelial cell differentiation Any process that activates or increases the frequency, rate or extent of blood vessel endothelial cell differentiation. NMDCO_relaxed.owl GO:0110059 biolink:NamedThing negative regulation of blood vessel endothelial cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel endothelial cell differentiation. NMDCO_relaxed.owl GO:0110110 biolink:NamedThing positive regulation of animal organ morphogenesis Any process that activates or increases the frequency, rate or extent of animal organ morphogenesis. NMDCO_relaxed.owl GO:0110111 biolink:NamedThing negative regulation of animal organ morphogenesis Any process that stops, prevents, or reduces the frequency, rate or extent of animal organ morphogenesis. NMDCO_relaxed.owl GO:0110112 biolink:NamedThing regulation of lipid transporter activity Any process that modulates the frequency, rate, or extent of lipid transporter activity. NMDCO_relaxed.owl GO:0110113 biolink:NamedThing positive regulation of lipid transporter activity Any process that increases the frequency, rate, or extent of lipid transporter activity. NMDCO_relaxed.owl GO:0110114 biolink:NamedThing negative regulation of lipid transporter activity Any process that decreases the frequency, rate, or extent of lipid transporter activity. NMDCO_relaxed.owl GO:0110116 biolink:NamedThing regulation of compound eye photoreceptor cell differentiation Any process that modulates the frequency, rate or extent of compound eye photoreceptor cell differentiation. NMDCO_relaxed.owl GO:0110117 biolink:NamedThing positive regulation of compound eye photoreceptor cell differentiation Any process that activates or increases the frequency, rate or extent of compound eye photoreceptor cell differentiation. NMDCO_relaxed.owl GO:0110118 biolink:NamedThing negative regulation of compound eye photoreceptor cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of compound eye photoreceptor cell differentiation. NMDCO_relaxed.owl GO:0120032 biolink:NamedThing regulation of plasma membrane bounded cell projection assembly Any process that modulates the rate, frequency, or extent of plasma membrane bounded cell projection assembly. NMDCO_relaxed.owl GO:0120033 biolink:NamedThing negative regulation of plasma membrane bounded cell projection assembly Any process that stops, prevents or reduces the frequency, rate or extent of plasma membrane bounded cell projection assembly. NMDCO_relaxed.owl GO:0120034 biolink:NamedThing positive regulation of plasma membrane bounded cell projection assembly Any process that activates or increases the frequency, rate or extent of plasma membrane bounded cell projection assembly. NMDCO_relaxed.owl GO:0120035 biolink:NamedThing regulation of plasma membrane bounded cell projection organization Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of plasma membrane bounded cell projections. NMDCO_relaxed.owl GO:0120158 biolink:NamedThing positive regulation of collagen catabolic process Any process that activates or increases the frequency, rate or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix. NMDCO_relaxed.owl GO:0120186 biolink:NamedThing negative regulation of protein localization to chromatin Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to chromatin. NMDCO_relaxed.owl GO:0120187 biolink:NamedThing positive regulation of protein localization to chromatin Any process that activates or increases the frequency, rate or extent of protein localization to chromatin. NMDCO_relaxed.owl GO:0120188 biolink:NamedThing regulation of bile acid secretion Any process that modulates the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue. NMDCO_relaxed.owl GO:0120189 biolink:NamedThing positive regulation of bile acid secretion Any process that activates or increases the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue. NMDCO_relaxed.owl GO:0120190 biolink:NamedThing negative regulation of bile acid secretion Any process that stops, prevents or reduces the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue. NMDCO_relaxed.owl GO:0120222 biolink:NamedThing regulation of blastocyst development Any process that modulates the frequency, rate or extent of blastocyst development. NMDCO_relaxed.owl GO:0120305 biolink:NamedThing regulation of pigmentation Any process that modulates the frequency, rate or extent of the deposition or modulates the distribution of coloring matter in an organism. NMDCO_relaxed.owl GO:0140243 biolink:NamedThing regulation of translation at synapse Any process that regulates translation occurring at the synapse. NMDCO_relaxed.owl GO:0140244 biolink:NamedThing regulation of translation at presynapse Any process that regulates translation occurring at the presynapse. NMDCO_relaxed.owl GO:0140245 biolink:NamedThing regulation of translation at postsynapse Any process that regulates translation occurring at the postsynapse. NMDCO_relaxed.owl GO:0140250 biolink:NamedThing regulation protein catabolic process at synapse Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the synapse. NMDCO_relaxed.owl GO:0140251 biolink:NamedThing regulation protein catabolic process at presynapse Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the presynapse. NMDCO_relaxed.owl GO:0140252 biolink:NamedThing regulation protein catabolic process at postsynapse Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the postsynapse. NMDCO_relaxed.owl GO:0150052 biolink:NamedThing regulation of postsynapse assembly Any process that modulates the frequency, rate or extent of postsynapse assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynapse. NMDCO_relaxed.owl GO:0150106 biolink:NamedThing regulation of protein localization to cell-cell junction Any process that modulates the frequency, rate or extent of protein localization to cell-cell junction. NMDCO_relaxed.owl GO:0150107 biolink:NamedThing positive regulation of protein localization to cell-cell junction Any process that activates or increases the frequency, rate or extent of protein localization to cell-cell junction. NMDCO_relaxed.owl GO:0150111 biolink:NamedThing regulation of transepithelial transport Any process that modulates the frequency, rate or extent of transepithelial transport. NMDCO_relaxed.owl GO:0150119 biolink:NamedThing negative regulation of protein localization to cell-cell junction Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell-cell junction. NMDCO_relaxed.owl GO:1900117 biolink:NamedThing regulation of execution phase of apoptosis Any process that modulates the frequency, rate or extent of execution phase of apoptosis. NMDCO_relaxed.owl GO:1900118 biolink:NamedThing negative regulation of execution phase of apoptosis Any process that stops, prevents or reduces the frequency, rate or extent of execution phase of apoptosis. NMDCO_relaxed.owl GO:1900119 biolink:NamedThing positive regulation of execution phase of apoptosis Any process that activates or increases the frequency, rate or extent of execution phase of apoptosis. NMDCO_relaxed.owl GO:1900125 biolink:NamedThing regulation of hyaluronan biosynthetic process Any process that modulates the frequency, rate or extent of hyaluronan biosynthetic process. NMDCO_relaxed.owl GO:1900126 biolink:NamedThing negative regulation of hyaluronan biosynthetic process Any process that stops, prevents or reduces the frequency, rate or extent of hyaluronan biosynthetic process. NMDCO_relaxed.owl GO:1900127 biolink:NamedThing positive regulation of hyaluronan biosynthetic process Any process that activates or increases the frequency, rate or extent of hyaluronan biosynthetic process. NMDCO_relaxed.owl GO:1900180 biolink:NamedThing regulation of protein localization to nucleus Any process that modulates the frequency, rate or extent of protein localization to nucleus. NMDCO_relaxed.owl GO:1900181 biolink:NamedThing negative regulation of protein localization to nucleus Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleus. NMDCO_relaxed.owl GO:1900182 biolink:NamedThing positive regulation of protein localization to nucleus Any process that activates or increases the frequency, rate or extent of protein localization to nucleus. NMDCO_relaxed.owl GO:1900193 biolink:NamedThing regulation of oocyte maturation Any process that modulates the frequency, rate or extent of oocyte maturation. NMDCO_relaxed.owl GO:1900194 biolink:NamedThing negative regulation of oocyte maturation Any process that stops, prevents or reduces the frequency, rate or extent of oocyte maturation. NMDCO_relaxed.owl GO:1900195 biolink:NamedThing positive regulation of oocyte maturation Any process that activates or increases the frequency, rate or extent of oocyte maturation. NMDCO_relaxed.owl GO:1900376 biolink:NamedThing regulation of secondary metabolite biosynthetic process Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process. NMDCO_relaxed.owl GO:1900377 biolink:NamedThing negative regulation of secondary metabolite biosynthetic process Any process that stops, prevents or reduces the frequency, rate or extent of secondary metabolite biosynthetic process. NMDCO_relaxed.owl GO:1900378 biolink:NamedThing positive regulation of secondary metabolite biosynthetic process Any process that activates or increases the frequency, rate or extent of secondary metabolite biosynthetic process. NMDCO_relaxed.owl GO:1901190 biolink:NamedThing regulation of formation of translation initiation ternary complex Any process that modulates the frequency, rate or extent of formation of translation initiation ternary complex. NMDCO_relaxed.owl GO:1901191 biolink:NamedThing negative regulation of formation of translation initiation ternary complex Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation initiation ternary complex. NMDCO_relaxed.owl GO:1901192 biolink:NamedThing positive regulation of formation of translation initiation ternary complex Any process that activates or increases the frequency, rate or extent of formation of translation initiation ternary complex. NMDCO_relaxed.owl GO:1901201 biolink:NamedThing regulation of extracellular matrix assembly Any process that modulates the frequency, rate or extent of extracellular matrix assembly. NMDCO_relaxed.owl GO:1901202 biolink:NamedThing negative regulation of extracellular matrix assembly Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix assembly. NMDCO_relaxed.owl GO:1901203 biolink:NamedThing positive regulation of extracellular matrix assembly Any process that activates or increases the frequency, rate or extent of extracellular matrix assembly. NMDCO_relaxed.owl GO:1901210 biolink:NamedThing regulation of cardiac chamber formation Any process that modulates the frequency, rate or extent of cardiac chamber formation. NMDCO_relaxed.owl GO:1901211 biolink:NamedThing negative regulation of cardiac chamber formation Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber formation. NMDCO_relaxed.owl GO:1901212 biolink:NamedThing positive regulation of cardiac chamber formation Any process that activates or increases the frequency, rate or extent of cardiac chamber formation. NMDCO_relaxed.owl GO:1901219 biolink:NamedThing regulation of cardiac chamber morphogenesis Any process that modulates the frequency, rate or extent of cardiac chamber morphogenesis. NMDCO_relaxed.owl GO:1901220 biolink:NamedThing negative regulation of cardiac chamber morphogenesis Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber morphogenesis. NMDCO_relaxed.owl GO:1901221 biolink:NamedThing positive regulation of cardiac chamber morphogenesis Any process that activates or increases the frequency, rate or extent of cardiac chamber morphogenesis. NMDCO_relaxed.owl GO:1901246 biolink:NamedThing regulation of lung ciliated cell differentiation Any process that modulates the frequency, rate or extent of lung ciliated cell differentiation. NMDCO_relaxed.owl GO:1901247 biolink:NamedThing negative regulation of lung ciliated cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of lung ciliated cell differentiation. NMDCO_relaxed.owl GO:1901248 biolink:NamedThing positive regulation of lung ciliated cell differentiation Any process that activates or increases the frequency, rate or extent of lung ciliated cell differentiation. NMDCO_relaxed.owl GO:1901342 biolink:NamedThing regulation of vasculature development Any process that modulates the frequency, rate or extent of vasculature development. NMDCO_relaxed.owl GO:1901343 biolink:NamedThing negative regulation of vasculature development Any process that stops, prevents or reduces the frequency, rate or extent of vasculature development. NMDCO_relaxed.owl GO:1901401 biolink:NamedThing regulation of tetrapyrrole metabolic process Any process that modulates the frequency, rate or extent of tetrapyrrole metabolic process. NMDCO_relaxed.owl GO:1901402 biolink:NamedThing negative regulation of tetrapyrrole metabolic process Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole metabolic process. NMDCO_relaxed.owl GO:1901403 biolink:NamedThing positive regulation of tetrapyrrole metabolic process Any process that activates or increases the frequency, rate or extent of tetrapyrrole metabolic process. NMDCO_relaxed.owl GO:1901404 biolink:NamedThing regulation of tetrapyrrole catabolic process Any process that modulates the frequency, rate or extent of tetrapyrrole catabolic process. NMDCO_relaxed.owl GO:1901405 biolink:NamedThing negative regulation of tetrapyrrole catabolic process Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole catabolic process. NMDCO_relaxed.owl GO:1901406 biolink:NamedThing positive regulation of tetrapyrrole catabolic process Any process that activates or increases the frequency, rate or extent of tetrapyrrole catabolic process. NMDCO_relaxed.owl GO:1901457 biolink:NamedThing regulation of response to acetate Any process that modulates the frequency, rate or extent of response to acetate. NMDCO_relaxed.owl GO:1901458 biolink:NamedThing negative regulation of response to acetate Any process that stops, prevents or reduces the frequency, rate or extent of response to acetate. NMDCO_relaxed.owl GO:1901459 biolink:NamedThing positive regulation of response to acetate Any process that activates or increases the frequency, rate or extent of response to acetate. NMDCO_relaxed.owl GO:1901463 biolink:NamedThing regulation of tetrapyrrole biosynthetic process Any process that modulates the frequency, rate or extent of tetrapyrrole biosynthetic process. NMDCO_relaxed.owl GO:1901464 biolink:NamedThing negative regulation of tetrapyrrole biosynthetic process Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process. NMDCO_relaxed.owl GO:1901465 biolink:NamedThing positive regulation of tetrapyrrole biosynthetic process Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process. NMDCO_relaxed.owl GO:1901509 biolink:NamedThing regulation of endothelial tube morphogenesis Any process that modulates the frequency, rate or extent of endothelial tube morphogenesis. NMDCO_relaxed.owl GO:1901532 biolink:NamedThing regulation of hematopoietic progenitor cell differentiation Any process that modulates the frequency, rate or extent of hematopoietic progenitor cell differentiation. NMDCO_relaxed.owl GO:1901533 biolink:NamedThing negative regulation of hematopoietic progenitor cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic progenitor cell differentiation. NMDCO_relaxed.owl GO:1901534 biolink:NamedThing positive regulation of hematopoietic progenitor cell differentiation Any process that activates or increases the frequency, rate or extent of hematopoietic progenitor cell differentiation. NMDCO_relaxed.owl GO:1901550 biolink:NamedThing regulation of endothelial cell development Any process that modulates the frequency, rate or extent of endothelial cell development. NMDCO_relaxed.owl GO:1901551 biolink:NamedThing negative regulation of endothelial cell development Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell development. NMDCO_relaxed.owl GO:1901552 biolink:NamedThing positive regulation of endothelial cell development Any process that activates or increases the frequency, rate or extent of endothelial cell development. NMDCO_relaxed.owl GO:1901608 biolink:NamedThing regulation of vesicle transport along microtubule Any process that modulates the frequency, rate or extent of vesicle transport along microtubule. NMDCO_relaxed.owl GO:1901609 biolink:NamedThing negative regulation of vesicle transport along microtubule Any process that stops, prevents or reduces the frequency, rate or extent of vesicle transport along microtubule. NMDCO_relaxed.owl GO:1901610 biolink:NamedThing positive regulation of vesicle transport along microtubule Any process that activates or increases the frequency, rate or extent of vesicle transport along microtubule. NMDCO_relaxed.owl GO:1901692 biolink:NamedThing regulation of compound eye retinal cell apoptotic process Any process that modulates the frequency, rate or extent of compound eye retinal cell apoptotic process. NMDCO_relaxed.owl GO:1901693 biolink:NamedThing negative regulation of compound eye retinal cell apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of compound eye retinal cell apoptotic process. NMDCO_relaxed.owl GO:1901694 biolink:NamedThing positive regulation of compound eye retinal cell apoptotic process Any process that activates or increases the frequency, rate or extent of compound eye retinal cell apoptotic process. NMDCO_relaxed.owl GO:1901861 biolink:NamedThing regulation of muscle tissue development Any process that modulates the frequency, rate or extent of muscle tissue development. NMDCO_relaxed.owl GO:1901862 biolink:NamedThing negative regulation of muscle tissue development Any process that stops, prevents or reduces the frequency, rate or extent of muscle tissue development. NMDCO_relaxed.owl GO:1901863 biolink:NamedThing positive regulation of muscle tissue development Any process that activates or increases the frequency, rate or extent of muscle tissue development. NMDCO_relaxed.owl GO:1901879 biolink:NamedThing regulation of protein depolymerization Any process that modulates the frequency, rate or extent of protein depolymerization. NMDCO_relaxed.owl GO:1901880 biolink:NamedThing negative regulation of protein depolymerization Any process that stops, prevents or reduces the frequency, rate or extent of protein depolymerization. NMDCO_relaxed.owl GO:1901881 biolink:NamedThing positive regulation of protein depolymerization Any process that activates or increases the frequency, rate or extent of protein depolymerization. NMDCO_relaxed.owl GO:1901889 biolink:NamedThing negative regulation of cell junction assembly Any process that stops, prevents or reduces the frequency, rate or extent of cell junction assembly. NMDCO_relaxed.owl GO:1901890 biolink:NamedThing positive regulation of cell junction assembly Any process that activates or increases the frequency, rate or extent of cell junction assembly. NMDCO_relaxed.owl GO:1901963 biolink:NamedThing regulation of cell proliferation involved in outflow tract morphogenesis Any process that modulates the frequency, rate or extent of cell proliferation involved in outflow tract morphogenesis. NMDCO_relaxed.owl GO:1901964 biolink:NamedThing positive regulation of cell proliferation involved in outflow tract morphogenesis Any process that activates or increases the frequency, rate or extent of cell proliferation involved in outflow tract morphogenesis. NMDCO_relaxed.owl GO:1902017 biolink:NamedThing regulation of cilium assembly Any process that modulates the frequency, rate or extent of cilium assembly. NMDCO_relaxed.owl GO:1902018 biolink:NamedThing negative regulation of cilium assembly Any process that stops, prevents or reduces the frequency, rate or extent of cilium assembly. NMDCO_relaxed.owl GO:1902033 biolink:NamedThing regulation of hematopoietic stem cell proliferation Any process that modulates the frequency, rate or extent of hematopoietic stem cell proliferation. NMDCO_relaxed.owl GO:1902034 biolink:NamedThing negative regulation of hematopoietic stem cell proliferation Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell proliferation. NMDCO_relaxed.owl GO:1902035 biolink:NamedThing positive regulation of hematopoietic stem cell proliferation Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell proliferation. NMDCO_relaxed.owl GO:1902036 biolink:NamedThing regulation of hematopoietic stem cell differentiation Any process that modulates the frequency, rate or extent of hematopoietic stem cell differentiation. NMDCO_relaxed.owl GO:1902037 biolink:NamedThing negative regulation of hematopoietic stem cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic stem cell differentiation. NMDCO_relaxed.owl GO:1902038 biolink:NamedThing positive regulation of hematopoietic stem cell differentiation Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell differentiation. NMDCO_relaxed.owl GO:1902105 biolink:NamedThing regulation of leukocyte differentiation Any process that modulates the frequency, rate or extent of leukocyte differentiation. NMDCO_relaxed.owl GO:1902106 biolink:NamedThing negative regulation of leukocyte differentiation Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte differentiation. NMDCO_relaxed.owl GO:1902107 biolink:NamedThing positive regulation of leukocyte differentiation Any process that activates or increases the frequency, rate or extent of leukocyte differentiation. NMDCO_relaxed.owl GO:1902115 biolink:NamedThing regulation of organelle assembly Any process that modulates the frequency, rate or extent of organelle assembly. NMDCO_relaxed.owl GO:1902116 biolink:NamedThing negative regulation of organelle assembly Any process that stops, prevents or reduces the frequency, rate or extent of organelle assembly. NMDCO_relaxed.owl GO:1902117 biolink:NamedThing positive regulation of organelle assembly Any process that activates or increases the frequency, rate or extent of organelle assembly. NMDCO_relaxed.owl GO:1902250 biolink:NamedThing regulation of erythrocyte apoptotic process Any process that modulates the frequency, rate or extent of erythrocyte apoptotic process. NMDCO_relaxed.owl GO:1902251 biolink:NamedThing negative regulation of erythrocyte apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte apoptotic process. NMDCO_relaxed.owl GO:1902252 biolink:NamedThing positive regulation of erythrocyte apoptotic process Any process that activates or increases the frequency, rate or extent of erythrocyte apoptotic process. NMDCO_relaxed.owl GO:1902256 biolink:NamedThing regulation of apoptotic process involved in outflow tract morphogenesis Any process that modulates the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis. NMDCO_relaxed.owl GO:1902257 biolink:NamedThing negative regulation of apoptotic process involved in outflow tract morphogenesis Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis. NMDCO_relaxed.owl GO:1902258 biolink:NamedThing positive regulation of apoptotic process involved in outflow tract morphogenesis Any process that activates or increases the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis. NMDCO_relaxed.owl GO:1902305 biolink:NamedThing regulation of sodium ion transmembrane transport Any process that modulates the frequency, rate or extent of sodium ion transmembrane transport. NMDCO_relaxed.owl GO:1902306 biolink:NamedThing negative regulation of sodium ion transmembrane transport Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transport. NMDCO_relaxed.owl GO:1902307 biolink:NamedThing positive regulation of sodium ion transmembrane transport Any process that activates or increases the frequency, rate or extent of sodium ion transmembrane transport. NMDCO_relaxed.owl GO:1902337 biolink:NamedThing regulation of apoptotic process involved in morphogenesis Any process that modulates the frequency, rate or extent of apoptotic process involved in morphogenesis. NMDCO_relaxed.owl GO:1902338 biolink:NamedThing negative regulation of apoptotic process involved in morphogenesis Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in morphogenesis. NMDCO_relaxed.owl GO:1902339 biolink:NamedThing positive regulation of apoptotic process involved in morphogenesis Any process that activates or increases the frequency, rate or extent of apoptotic process involved in morphogenesis. NMDCO_relaxed.owl GO:1902340 biolink:NamedThing negative regulation of chromosome condensation Any process that stops, prevents or reduces the frequency, rate or extent of chromosome condensation. NMDCO_relaxed.owl GO:1902369 biolink:NamedThing negative regulation of RNA catabolic process Any process that stops, prevents or reduces the frequency, rate or extent of RNA catabolic process. NMDCO_relaxed.owl GO:1902473 biolink:NamedThing regulation of protein localization to synapse Any process that modulates the frequency, rate or extent of protein localization to synapse. NMDCO_relaxed.owl GO:1902474 biolink:NamedThing positive regulation of protein localization to synapse Any process that activates or increases the frequency, rate or extent of protein localization to synapse. NMDCO_relaxed.owl GO:1902510 biolink:NamedThing regulation of apoptotic DNA fragmentation Any process that modulates the frequency, rate or extent of apoptotic DNA fragmentation. NMDCO_relaxed.owl GO:1902511 biolink:NamedThing negative regulation of apoptotic DNA fragmentation Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic DNA fragmentation. NMDCO_relaxed.owl GO:1902512 biolink:NamedThing positive regulation of apoptotic DNA fragmentation Any process that activates or increases the frequency, rate or extent of apoptotic DNA fragmentation. NMDCO_relaxed.owl GO:1902513 biolink:NamedThing regulation of organelle transport along microtubule Any process that modulates the frequency, rate or extent of organelle transport along microtubule. NMDCO_relaxed.owl GO:1902531 biolink:NamedThing regulation of intracellular signal transduction Any process that modulates the frequency, rate or extent of intracellular signal transduction. NMDCO_relaxed.owl GO:1902532 biolink:NamedThing negative regulation of intracellular signal transduction Any process that stops, prevents or reduces the frequency, rate or extent of intracellular signal transduction. NMDCO_relaxed.owl GO:1902533 biolink:NamedThing positive regulation of intracellular signal transduction Any process that activates or increases the frequency, rate or extent of intracellular signal transduction. NMDCO_relaxed.owl GO:1902679 biolink:NamedThing negative regulation of RNA biosynthetic process Any process that stops, prevents or reduces the frequency, rate or extent of RNA biosynthetic process. NMDCO_relaxed.owl GO:1902680 biolink:NamedThing positive regulation of RNA biosynthetic process Any process that activates or increases the frequency, rate or extent of RNA biosynthetic process. NMDCO_relaxed.owl GO:1902692 biolink:NamedThing regulation of neuroblast proliferation Any process that modulates the frequency, rate or extent of neuroblast proliferation. NMDCO_relaxed.owl GO:1902738 biolink:NamedThing regulation of chondrocyte differentiation involved in endochondral bone morphogenesis Any process that modulates the rate, frequency, or extent of the process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the development of a bone. A chondrocyte is a polymorphic cell that forms cartilage. NMDCO_relaxed.owl GO:1902761 biolink:NamedThing positive regulation of chondrocyte development Any process that activates or increases the frequency, rate or extent of chondrocyte development. NMDCO_relaxed.owl GO:1902809 biolink:NamedThing regulation of skeletal muscle fiber differentiation Any process that modulates the frequency, rate or extent of skeletal muscle fiber differentiation. NMDCO_relaxed.owl GO:1902810 biolink:NamedThing negative regulation of skeletal muscle fiber differentiation Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle fiber differentiation. NMDCO_relaxed.owl GO:1902811 biolink:NamedThing positive regulation of skeletal muscle fiber differentiation Any process that activates or increases the frequency, rate or extent of skeletal muscle fiber differentiation. NMDCO_relaxed.owl GO:1902816 biolink:NamedThing regulation of protein localization to microtubule Any process that modulates the frequency, rate or extent of protein localization to microtubule. NMDCO_relaxed.owl GO:1902817 biolink:NamedThing negative regulation of protein localization to microtubule Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to microtubule. NMDCO_relaxed.owl GO:1902838 biolink:NamedThing regulation of nuclear migration along microtubule Any process that modulates the frequency, rate or extent of nuclear migration along microtubule. NMDCO_relaxed.owl GO:1902839 biolink:NamedThing negative regulation of nuclear migration along microtubule Any process that stops, prevents or reduces the frequency, rate or extent of nuclear migration along microtubule. NMDCO_relaxed.owl GO:1902840 biolink:NamedThing positive regulation of nuclear migration along microtubule Any process that activates or increases the frequency, rate or extent of nuclear migration along microtubule. NMDCO_relaxed.owl GO:1902863 biolink:NamedThing regulation of embryonic camera-type eye development Any process that modulates the frequency, rate or extent of embryonic camera-type eye development. NMDCO_relaxed.owl GO:1902864 biolink:NamedThing negative regulation of embryonic camera-type eye development Any process that stops, prevents or reduces the frequency, rate or extent of embryonic camera-type eye development. NMDCO_relaxed.owl GO:1902865 biolink:NamedThing positive regulation of embryonic camera-type eye development Any process that activates or increases the frequency, rate or extent of embryonic camera-type eye development. NMDCO_relaxed.owl GO:1902866 biolink:NamedThing regulation of retina development in camera-type eye Any process that modulates the frequency, rate or extent of retina development in camera-type eye. NMDCO_relaxed.owl GO:1902867 biolink:NamedThing negative regulation of retina development in camera-type eye Any process that stops, prevents or reduces the frequency, rate or extent of retina development in camera-type eye. NMDCO_relaxed.owl GO:1902868 biolink:NamedThing positive regulation of retina development in camera-type eye Any process that activates or increases the frequency, rate or extent of retina development in camera-type eye. NMDCO_relaxed.owl GO:1902904 biolink:NamedThing negative regulation of supramolecular fiber organization Any process that stops, prevents or reduces the frequency, rate or extent of fibril organization. NMDCO_relaxed.owl GO:1902905 biolink:NamedThing positive regulation of supramolecular fiber organization Any process that activates or increases the frequency, rate or extent of supramolecular fiber organization. NMDCO_relaxed.owl GO:1902913 biolink:NamedThing positive regulation of neuroepithelial cell differentiation Any process that activates or increases the frequency, rate or extent of neuroepithelial cell differentiation. NMDCO_relaxed.owl GO:1903010 biolink:NamedThing regulation of bone development Any process that modulates the frequency, rate or extent of bone development. NMDCO_relaxed.owl GO:1903011 biolink:NamedThing negative regulation of bone development Any process that stops, prevents or reduces the frequency, rate or extent of bone development. NMDCO_relaxed.owl GO:1903012 biolink:NamedThing positive regulation of bone development Any process that activates or increases the frequency, rate or extent of bone development. NMDCO_relaxed.owl GO:1903018 biolink:NamedThing regulation of glycoprotein metabolic process Any process that modulates the frequency, rate or extent of glycoprotein metabolic process. NMDCO_relaxed.owl GO:1903019 biolink:NamedThing negative regulation of glycoprotein metabolic process Any process that stops, prevents or reduces the frequency, rate or extent of glycoprotein metabolic process. NMDCO_relaxed.owl GO:1903020 biolink:NamedThing positive regulation of glycoprotein metabolic process Any process that activates or increases the frequency, rate or extent of glycoprotein metabolic process. NMDCO_relaxed.owl GO:1903054 biolink:NamedThing negative regulation of extracellular matrix organization Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix organization. NMDCO_relaxed.owl GO:1903055 biolink:NamedThing positive regulation of extracellular matrix organization Any process that activates or increases the frequency, rate or extent of extracellular matrix organization. NMDCO_relaxed.owl GO:1903076 biolink:NamedThing regulation of protein localization to plasma membrane Any process that modulates the frequency, rate or extent of protein localization to plasma membrane. NMDCO_relaxed.owl GO:1903077 biolink:NamedThing negative regulation of protein localization to plasma membrane Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to plasma membrane. NMDCO_relaxed.owl GO:1903078 biolink:NamedThing positive regulation of protein localization to plasma membrane Any process that activates or increases the frequency, rate or extent of protein localization to plasma membrane. NMDCO_relaxed.owl GO:1903115 biolink:NamedThing regulation of actin filament-based movement Any process that modulates the frequency, rate or extent of actin filament-based movement. NMDCO_relaxed.owl GO:1903116 biolink:NamedThing positive regulation of actin filament-based movement Any process that activates or increases the frequency, rate or extent of actin filament-based movement. NMDCO_relaxed.owl GO:1903224 biolink:NamedThing regulation of endodermal cell differentiation Any process that modulates the frequency, rate or extent of endodermal cell differentiation. NMDCO_relaxed.owl GO:1903225 biolink:NamedThing negative regulation of endodermal cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of endodermal cell differentiation. NMDCO_relaxed.owl GO:1903226 biolink:NamedThing positive regulation of endodermal cell differentiation Any process that activates or increases the frequency, rate or extent of endodermal cell differentiation. NMDCO_relaxed.owl GO:1903335 biolink:NamedThing regulation of vacuolar transport Any process that modulates the frequency, rate or extent of vacuolar transport. NMDCO_relaxed.owl GO:1903336 biolink:NamedThing negative regulation of vacuolar transport Any process that stops, prevents or reduces the frequency, rate or extent of vacuolar transport. NMDCO_relaxed.owl GO:1903337 biolink:NamedThing positive regulation of vacuolar transport Any process that activates or increases the frequency, rate or extent of vacuolar transport. NMDCO_relaxed.owl GO:1903353 biolink:NamedThing regulation of nucleus organization Any process that modulates the frequency, rate or extent of nucleus organization. NMDCO_relaxed.owl GO:1903358 biolink:NamedThing regulation of Golgi organization Any process that modulates the frequency, rate or extent of Golgi organization. NMDCO_relaxed.owl GO:1903379 biolink:NamedThing regulation of mitotic chromosome condensation Any process that modulates the frequency, rate or extent of mitotic chromosome condensation. NMDCO_relaxed.owl GO:1903380 biolink:NamedThing positive regulation of mitotic chromosome condensation Any process that activates or increases the frequency, rate or extent of mitotic chromosome condensation. NMDCO_relaxed.owl GO:1903429 biolink:NamedThing regulation of cell maturation Any process that modulates the frequency, rate or extent of cell maturation. NMDCO_relaxed.owl GO:1903430 biolink:NamedThing negative regulation of cell maturation Any process that stops, prevents or reduces the frequency, rate or extent of cell maturation. NMDCO_relaxed.owl GO:1903431 biolink:NamedThing positive regulation of cell maturation Any process that activates or increases the frequency, rate or extent of cell maturation. NMDCO_relaxed.owl GO:1903522 biolink:NamedThing regulation of blood circulation Any process that modulates the frequency, rate or extent of blood circulation. NMDCO_relaxed.owl GO:1903523 biolink:NamedThing negative regulation of blood circulation Any process that stops, prevents or reduces the frequency, rate or extent of blood circulation. NMDCO_relaxed.owl GO:1903524 biolink:NamedThing positive regulation of blood circulation Any process that activates or increases the frequency, rate or extent of blood circulation. NMDCO_relaxed.owl GO:1903530 biolink:NamedThing regulation of secretion by cell Any process that modulates the frequency, rate or extent of secretion by cell. NMDCO_relaxed.owl GO:1903531 biolink:NamedThing negative regulation of secretion by cell Any process that stops, prevents or reduces the frequency, rate or extent of secretion by cell. NMDCO_relaxed.owl GO:1903532 biolink:NamedThing positive regulation of secretion by cell Any process that activates or increases the frequency, rate or extent of secretion by cell. NMDCO_relaxed.owl GO:1903538 biolink:NamedThing regulation of meiotic cell cycle process involved in oocyte maturation Any process that modulates the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation. NMDCO_relaxed.owl GO:1903541 biolink:NamedThing regulation of exosomal secretion Any process that modulates the frequency, rate or extent of exosomal secretion. NMDCO_relaxed.owl GO:1903542 biolink:NamedThing negative regulation of exosomal secretion Any process that stops, prevents or reduces the frequency, rate or extent of exosomal secretion. NMDCO_relaxed.owl GO:1903543 biolink:NamedThing positive regulation of exosomal secretion Any process that activates or increases the frequency, rate or extent of exosomal secretion. NMDCO_relaxed.owl GO:1903551 biolink:NamedThing regulation of extracellular exosome assembly Any process that modulates the frequency, rate or extent of extracellular vesicular exosome assembly. NMDCO_relaxed.owl GO:1903552 biolink:NamedThing negative regulation of extracellular exosome assembly Any process that stops, prevents or reduces the frequency, rate or extent of extracellular vesicular exosome assembly. NMDCO_relaxed.owl GO:1903553 biolink:NamedThing positive regulation of extracellular exosome assembly Any process that activates or increases the frequency, rate or extent of extracellular vesicular exosome assembly. NMDCO_relaxed.owl GO:1903564 biolink:NamedThing regulation of protein localization to cilium Any process that modulates the frequency, rate or extent of protein localization to cilium. NMDCO_relaxed.owl GO:1903565 biolink:NamedThing negative regulation of protein localization to cilium Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cilium. NMDCO_relaxed.owl GO:1903566 biolink:NamedThing positive regulation of protein localization to cilium Any process that activates or increases the frequency, rate or extent of protein localization to cilium. NMDCO_relaxed.owl GO:1903567 biolink:NamedThing regulation of protein localization to ciliary membrane Any process that modulates the frequency, rate or extent of protein localization to ciliary membrane. NMDCO_relaxed.owl GO:1903568 biolink:NamedThing negative regulation of protein localization to ciliary membrane Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to ciliary membrane. NMDCO_relaxed.owl GO:1903569 biolink:NamedThing positive regulation of protein localization to ciliary membrane Any process that activates or increases the frequency, rate or extent of protein localization to ciliary membrane. NMDCO_relaxed.owl GO:1903624 biolink:NamedThing regulation of DNA catabolic process Any process that modulates the frequency, rate or extent of DNA catabolic process. NMDCO_relaxed.owl GO:1903625 biolink:NamedThing negative regulation of DNA catabolic process Any process that stops, prevents or reduces the frequency, rate or extent of DNA catabolic process. NMDCO_relaxed.owl GO:1903626 biolink:NamedThing positive regulation of DNA catabolic process Any process that activates or increases the frequency, rate or extent of DNA catabolic process. NMDCO_relaxed.owl GO:1903697 biolink:NamedThing negative regulation of microvillus assembly Any process that stops, prevents or reduces the frequency, rate or extent of microvillus assembly. NMDCO_relaxed.owl GO:1903698 biolink:NamedThing positive regulation of microvillus assembly Any process that activates or increases the frequency, rate or extent of microvillus assembly. NMDCO_relaxed.owl GO:1903706 biolink:NamedThing regulation of hemopoiesis Any process that modulates the frequency, rate or extent of hemopoiesis. NMDCO_relaxed.owl GO:1903707 biolink:NamedThing negative regulation of hemopoiesis Any process that stops, prevents or reduces the frequency, rate or extent of hemopoiesis. NMDCO_relaxed.owl GO:1903708 biolink:NamedThing positive regulation of hemopoiesis Any process that activates or increases the frequency, rate or extent of hemopoiesis. NMDCO_relaxed.owl GO:1903779 biolink:NamedThing regulation of cardiac conduction Any process that modulates the frequency, rate or extent of cardiac conduction. NMDCO_relaxed.owl GO:1903780 biolink:NamedThing negative regulation of cardiac conduction Any process that stops, prevents or reduces the frequency, rate or extent of cardiac conduction. NMDCO_relaxed.owl GO:1903781 biolink:NamedThing positive regulation of cardiac conduction Any process that activates or increases the frequency, rate or extent of cardiac conduction. NMDCO_relaxed.owl GO:1903789 biolink:NamedThing regulation of amino acid transmembrane transport Any process that modulates the frequency, rate or extent of amino acid transmembrane transport. NMDCO_relaxed.owl GO:1903795 biolink:NamedThing regulation of inorganic anion transmembrane transport Any process that modulates the frequency, rate or extent of inorganic anion transmembrane transport. NMDCO_relaxed.owl GO:1903796 biolink:NamedThing negative regulation of inorganic anion transmembrane transport Any process that stops, prevents or reduces the frequency, rate or extent of inorganic anion transmembrane transport. NMDCO_relaxed.owl GO:1903797 biolink:NamedThing positive regulation of inorganic anion transmembrane transport Any process that activates or increases the frequency, rate or extent of inorganic anion transmembrane transport. NMDCO_relaxed.owl GO:1903828 biolink:NamedThing negative regulation of protein localization Any process that stops, prevents or reduces the frequency, rate or extent of a protein localization. NMDCO_relaxed.owl GO:1903829 biolink:NamedThing positive regulation of protein localization Any process that activates or increases the frequency, rate or extent of a protein localization. NMDCO_relaxed.owl GO:1903847 biolink:NamedThing regulation of aorta morphogenesis Any process that modulates the frequency, rate or extent of aorta morphogenesis. NMDCO_relaxed.owl GO:1903848 biolink:NamedThing negative regulation of aorta morphogenesis Any process that stops, prevents or reduces the frequency, rate or extent of aorta morphogenesis. NMDCO_relaxed.owl GO:1903849 biolink:NamedThing positive regulation of aorta morphogenesis Any process that activates or increases the frequency, rate or extent of aorta morphogenesis. NMDCO_relaxed.owl GO:1903941 biolink:NamedThing negative regulation of respiratory gaseous exchange Any process that stops, prevents or reduces the frequency, rate or extent of respiratory gaseous exchange. NMDCO_relaxed.owl GO:1903942 biolink:NamedThing positive regulation of respiratory gaseous exchange Any process that activates or increases the frequency, rate or extent of respiratory gaseous exchange. NMDCO_relaxed.owl GO:1903943 biolink:NamedThing regulation of hepatocyte apoptotic process Any process that modulates the frequency, rate or extent of hepatocyte apoptotic process. NMDCO_relaxed.owl GO:1903944 biolink:NamedThing negative regulation of hepatocyte apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of hepatocyte apoptotic process. NMDCO_relaxed.owl GO:1903945 biolink:NamedThing positive regulation of hepatocyte apoptotic process Any process that activates or increases the frequency, rate or extent of hepatocyte apoptotic process. NMDCO_relaxed.owl GO:1903950 biolink:NamedThing negative regulation of AV node cell action potential Any process that stops, prevents or reduces the frequency, rate or extent of AV node cell action potential. NMDCO_relaxed.owl GO:1903951 biolink:NamedThing positive regulation of AV node cell action potential Any process that activates or increases the frequency, rate or extent of AV node cell action potential. NMDCO_relaxed.owl GO:1904018 biolink:NamedThing positive regulation of vasculature development Any process that activates or increases the frequency, rate or extent of vasculature development. NMDCO_relaxed.owl GO:1904026 biolink:NamedThing regulation of collagen fibril organization Any process that modulates the frequency, rate or extent of collagen fibril organization. NMDCO_relaxed.owl GO:1904027 biolink:NamedThing negative regulation of collagen fibril organization Any process that stops, prevents or reduces the frequency, rate or extent of collagen fibril organization. NMDCO_relaxed.owl GO:1904028 biolink:NamedThing positive regulation of collagen fibril organization Any process that activates or increases the frequency, rate or extent of collagen fibril organization. NMDCO_relaxed.owl GO:1904035 biolink:NamedThing regulation of epithelial cell apoptotic process Any process that modulates the frequency, rate or extent of epithelial cell apoptotic process. NMDCO_relaxed.owl GO:1904036 biolink:NamedThing negative regulation of epithelial cell apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell apoptotic process. NMDCO_relaxed.owl GO:1904037 biolink:NamedThing positive regulation of epithelial cell apoptotic process Any process that activates or increases the frequency, rate or extent of epithelial cell apoptotic process. NMDCO_relaxed.owl GO:1904054 biolink:NamedThing regulation of cholangiocyte proliferation Any process that modulates the frequency, rate or extent of cholangiocyte proliferation. NMDCO_relaxed.owl GO:1904055 biolink:NamedThing negative regulation of cholangiocyte proliferation Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte proliferation. NMDCO_relaxed.owl GO:1904056 biolink:NamedThing positive regulation of cholangiocyte proliferation Any process that activates or increases the frequency, rate or extent of cholangiocyte proliferation. NMDCO_relaxed.owl GO:1904057 biolink:NamedThing negative regulation of sensory perception of pain Any process that stops, prevents or reduces the frequency, rate or extent of sensory perception of pain. NMDCO_relaxed.owl GO:1904058 biolink:NamedThing positive regulation of sensory perception of pain Any process that activates or increases the frequency, rate or extent of sensory perception of pain. NMDCO_relaxed.owl GO:1904062 biolink:NamedThing regulation of monoatomic cation transmembrane transport Any process that modulates the frequency, rate or extent of cation transmembrane transport. NMDCO_relaxed.owl GO:1904063 biolink:NamedThing negative regulation of cation transmembrane transport Any process that stops, prevents or reduces the frequency, rate or extent of cation transmembrane transport. NMDCO_relaxed.owl GO:1904064 biolink:NamedThing positive regulation of cation transmembrane transport Any process that activates or increases the frequency, rate or extent of cation transmembrane transport. NMDCO_relaxed.owl GO:1904073 biolink:NamedThing regulation of trophectodermal cell proliferation Any process that modulates the frequency, rate or extent of trophectodermal cell proliferation. NMDCO_relaxed.owl GO:1904074 biolink:NamedThing negative regulation of trophectodermal cell proliferation Any process that stops, prevents or reduces the frequency, rate or extent of trophectodermal cell proliferation. NMDCO_relaxed.owl GO:1904075 biolink:NamedThing positive regulation of trophectodermal cell proliferation Any process that activates or increases the frequency, rate or extent of trophectodermal cell proliferation. NMDCO_relaxed.owl GO:1904145 biolink:NamedThing negative regulation of meiotic cell cycle process involved in oocyte maturation Any process that stops, prevents or reduces the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation. NMDCO_relaxed.owl GO:1904146 biolink:NamedThing positive regulation of meiotic cell cycle process involved in oocyte maturation Any process that activates or increases the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation. NMDCO_relaxed.owl GO:1904170 biolink:NamedThing regulation of bleb assembly Any process that modulates the frequency, rate or extent of bleb assembly. NMDCO_relaxed.owl GO:1904171 biolink:NamedThing negative regulation of bleb assembly Any process that stops, prevents or reduces the frequency, rate or extent of bleb assembly. NMDCO_relaxed.owl GO:1904172 biolink:NamedThing positive regulation of bleb assembly Any process that activates or increases the frequency, rate or extent of bleb assembly. NMDCO_relaxed.owl GO:1904177 biolink:NamedThing regulation of adipose tissue development Any process that modulates the frequency, rate or extent of adipose tissue development. NMDCO_relaxed.owl GO:1904178 biolink:NamedThing negative regulation of adipose tissue development Any process that stops, prevents or reduces the frequency, rate or extent of adipose tissue development. NMDCO_relaxed.owl GO:1904179 biolink:NamedThing positive regulation of adipose tissue development Any process that activates or increases the frequency, rate or extent of adipose tissue development. NMDCO_relaxed.owl GO:1904192 biolink:NamedThing regulation of cholangiocyte apoptotic process Any process that modulates the frequency, rate or extent of cholangiocyte apoptotic process. NMDCO_relaxed.owl GO:1904193 biolink:NamedThing negative regulation of cholangiocyte apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte apoptotic process. NMDCO_relaxed.owl GO:1904194 biolink:NamedThing positive regulation of cholangiocyte apoptotic process Any process that activates or increases the frequency, rate or extent of cholangiocyte apoptotic process. NMDCO_relaxed.owl GO:1904204 biolink:NamedThing regulation of skeletal muscle hypertrophy Any process that modulates the frequency, rate or extent of skeletal muscle hypertrophy. NMDCO_relaxed.owl GO:1904205 biolink:NamedThing negative regulation of skeletal muscle hypertrophy Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle hypertrophy. NMDCO_relaxed.owl GO:1904206 biolink:NamedThing positive regulation of skeletal muscle hypertrophy Any process that activates or increases the frequency, rate or extent of skeletal muscle hypertrophy. NMDCO_relaxed.owl GO:1904251 biolink:NamedThing regulation of bile acid metabolic process Any process that modulates the frequency, rate or extent of bile acid metabolic process. NMDCO_relaxed.owl GO:1904252 biolink:NamedThing negative regulation of bile acid metabolic process Any process that stops, prevents or reduces the frequency, rate or extent of bile acid metabolic process. NMDCO_relaxed.owl GO:1904253 biolink:NamedThing positive regulation of bile acid metabolic process Any process that activates or increases the frequency, rate or extent of bile acid metabolic process. NMDCO_relaxed.owl GO:1904304 biolink:NamedThing regulation of gastro-intestinal system smooth muscle contraction Any process that modulates the frequency, rate or extent of gastro-intestinal system smooth muscle contraction. NMDCO_relaxed.owl GO:1904305 biolink:NamedThing negative regulation of gastro-intestinal system smooth muscle contraction Any process that stops, prevents or reduces the frequency, rate or extent of gastro-intestinal system smooth muscle contraction. NMDCO_relaxed.owl GO:1904306 biolink:NamedThing positive regulation of gastro-intestinal system smooth muscle contraction Any process that activates or increases the frequency, rate or extent of gastro-intestinal system smooth muscle contraction. NMDCO_relaxed.owl GO:1904341 biolink:NamedThing regulation of colon smooth muscle contraction Any process that modulates the frequency, rate or extent of colon smooth muscle contraction. NMDCO_relaxed.owl GO:1904342 biolink:NamedThing negative regulation of colon smooth muscle contraction Any process that stops, prevents or reduces the frequency, rate or extent of colon smooth muscle contraction. NMDCO_relaxed.owl GO:1904343 biolink:NamedThing positive regulation of colon smooth muscle contraction Any process that activates or increases the frequency, rate or extent of colon smooth muscle contraction. NMDCO_relaxed.owl GO:1904344 biolink:NamedThing regulation of gastric mucosal blood circulation Any process that modulates the frequency, rate or extent of gastric mucosal blood circulation. NMDCO_relaxed.owl GO:1904345 biolink:NamedThing negative regulation of gastric mucosal blood circulation Any process that stops, prevents or reduces the frequency, rate or extent of gastric mucosal blood circulation. NMDCO_relaxed.owl GO:1904346 biolink:NamedThing positive regulation of gastric mucosal blood circulation Any process that activates or increases the frequency, rate or extent of gastric mucosal blood circulation. NMDCO_relaxed.owl GO:1904347 biolink:NamedThing regulation of small intestine smooth muscle contraction Any process that modulates the frequency, rate or extent of small intestine smooth muscle contraction. NMDCO_relaxed.owl GO:1904348 biolink:NamedThing negative regulation of small intestine smooth muscle contraction Any process that stops, prevents or reduces the frequency, rate or extent of small intestine smooth muscle contraction. NMDCO_relaxed.owl GO:1904349 biolink:NamedThing positive regulation of small intestine smooth muscle contraction Any process that activates or increases the frequency, rate or extent of small intestine smooth muscle contraction. NMDCO_relaxed.owl GO:1904350 biolink:NamedThing regulation of protein catabolic process in the vacuole Any process that modulates the frequency, rate or extent of protein catabolic process in the vacuole. NMDCO_relaxed.owl GO:1904351 biolink:NamedThing negative regulation of protein catabolic process in the vacuole Any process that stops, prevents or reduces the frequency, rate or extent of protein catabolic process in the vacuole. NMDCO_relaxed.owl GO:1904352 biolink:NamedThing positive regulation of protein catabolic process in the vacuole Any process that activates or increases the frequency, rate or extent of protein catabolic process in the vacuole. NMDCO_relaxed.owl GO:1904375 biolink:NamedThing regulation of protein localization to cell periphery Any process that modulates the frequency, rate or extent of protein localization to cell periphery. NMDCO_relaxed.owl GO:1904376 biolink:NamedThing negative regulation of protein localization to cell periphery Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell periphery. NMDCO_relaxed.owl GO:1904377 biolink:NamedThing positive regulation of protein localization to cell periphery Any process that activates or increases the frequency, rate or extent of protein localization to cell periphery. NMDCO_relaxed.owl GO:1904396 biolink:NamedThing regulation of neuromuscular junction development Any process that modulates the frequency, rate or extent of neuromuscular junction development. NMDCO_relaxed.owl GO:1904397 biolink:NamedThing negative regulation of neuromuscular junction development Any process that stops, prevents or reduces the frequency, rate or extent of neuromuscular junction development. NMDCO_relaxed.owl GO:1904398 biolink:NamedThing positive regulation of neuromuscular junction development Any process that activates or increases the frequency, rate or extent of neuromuscular junction development. NMDCO_relaxed.owl GO:1904409 biolink:NamedThing regulation of secretory granule organization Any process that modulates the frequency, rate or extent of secretory granule organization. NMDCO_relaxed.owl GO:1904410 biolink:NamedThing negative regulation of secretory granule organization Any process that stops, prevents or reduces the frequency, rate or extent of secretory granule organization. NMDCO_relaxed.owl GO:1904411 biolink:NamedThing positive regulation of secretory granule organization Any process that activates or increases the frequency, rate or extent of secretory granule organization. NMDCO_relaxed.owl GO:1904412 biolink:NamedThing regulation of cardiac ventricle development Any process that modulates the frequency, rate or extent of cardiac ventricle development. NMDCO_relaxed.owl GO:1904413 biolink:NamedThing negative regulation of cardiac ventricle development Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle development. NMDCO_relaxed.owl GO:1904414 biolink:NamedThing positive regulation of cardiac ventricle development Any process that activates or increases the frequency, rate or extent of cardiac ventricle development. NMDCO_relaxed.owl GO:1904456 biolink:NamedThing negative regulation of neuronal action potential Any process that stops, prevents or reduces the frequency, rate or extent of neuronal action potential. NMDCO_relaxed.owl GO:1904457 biolink:NamedThing positive regulation of neuronal action potential Any process that activates or increases the frequency, rate or extent of neuronal action potential. NMDCO_relaxed.owl GO:1904649 biolink:NamedThing regulation of fat cell apoptotic process Any process that modulates the frequency, rate or extent of fat cell apoptotic process. NMDCO_relaxed.owl GO:1904650 biolink:NamedThing negative regulation of fat cell apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of fat cell apoptotic process. NMDCO_relaxed.owl GO:1904651 biolink:NamedThing positive regulation of fat cell apoptotic process Any process that activates or increases the frequency, rate or extent of fat cell apoptotic process. NMDCO_relaxed.owl GO:1904675 biolink:NamedThing regulation of somatic stem cell division Any process that modulates the frequency, rate or extent of somatic stem cell division. NMDCO_relaxed.owl GO:1904676 biolink:NamedThing negative regulation of somatic stem cell division Any process that stops, prevents or reduces the frequency, rate or extent of somatic stem cell division. NMDCO_relaxed.owl GO:1904677 biolink:NamedThing positive regulation of somatic stem cell division Any process that activates or increases the frequency, rate or extent of somatic stem cell division. NMDCO_relaxed.owl GO:1904691 biolink:NamedThing negative regulation of type B pancreatic cell proliferation Any process that stops, prevents or reduces the frequency, rate or extent of type B pancreatic cell proliferation. NMDCO_relaxed.owl GO:1904692 biolink:NamedThing positive regulation of type B pancreatic cell proliferation Any process that activates or increases the frequency, rate or extent of type B pancreatic cell proliferation. NMDCO_relaxed.owl GO:1904697 biolink:NamedThing regulation of acinar cell proliferation Any process that modulates the frequency, rate or extent of acinar cell proliferation. NMDCO_relaxed.owl GO:1904698 biolink:NamedThing negative regulation of acinar cell proliferation Any process that stops, prevents or reduces the frequency, rate or extent of acinar cell proliferation. NMDCO_relaxed.owl GO:1904699 biolink:NamedThing positive regulation of acinar cell proliferation Any process that activates or increases the frequency, rate or extent of acinar cell proliferation. NMDCO_relaxed.owl N62ffe19b9d4a49ba88154fd0615c91bd biolink:NamedThing NMDCO_relaxed.owl N6a20fddffc994e38aee31cf3beed8392 biolink:NamedThing NMDCO_relaxed.owl N0b578e94e0a94f27a6433304dc00f081 biolink:NamedThing NMDCO_relaxed.owl N04e761b67d1a436ea52e14eb44d1a9d1 biolink:NamedThing NMDCO_relaxed.owl PATO:0001393 biolink:NamedThing euploid A ploidy quality inhering in a bearer by virtue of the bearer's containing an integral multiple of the monoploid number, possibly excluding the sex-determining chromosomes. NMDCO_relaxed.owl Na3627e7ea4fd473688d2f4d081f85ba0 biolink:NamedThing NMDCO_relaxed.owl UBERON:0008346 biolink:NamedThing duodenal epithelium An epithelium that is part of a duodenum. NMDCO_relaxed.owl NCBITaxon:33208 biolink:NamedThing Metazoa NMDCO_relaxed.owl Nb96b4180082146ba8a3b0e15098abc0b biolink:NamedThing NMDCO_relaxed.owl PATO:0000690 biolink:NamedThing discontinuous A quality of a single process inhering in a bearer by virtue of the bearer's being marked by breaks or interruptions. NMDCO_relaxed.owl UBERON:0001134 biolink:NamedThing skeletal muscle tissue Muscle tissue that consists primarily of skeletal muscle fibers. NMDCO_relaxed.owl UBERON:0013695 biolink:NamedThing colon endothelium Vascular endothelium found in colon blood vessels. NMDCO_relaxed.owl PATO:0002299 biolink:NamedThing tubular A cylindrical shape that is hollow. NMDCO_relaxed.owl Nfe03a32ec22d46858c51a9b4f4fcba6a biolink:NamedThing NMDCO_relaxed.owl Nc8e08c8c01d5482aa4c77454a9ceca15 biolink:NamedThing NMDCO_relaxed.owl GO:0031045 biolink:NamedThing dense core granule Electron-dense organelle with a granular internal matrix; contains proteins destined to be secreted. NMDCO_relaxed.owl Ndade700c2e324610bcf9ede69854b653 biolink:NamedThing NMDCO_relaxed.owl PATO:0001154 biolink:NamedThing elongated A quality inhering in a bearer by virtue of the bearer's length being notably higher than its width. NMDCO_relaxed.owl PATO:0000963 biolink:NamedThing opaque A optical quality inhering in a bearer by virtue of the bearer's not being clear; not transmitting or reflecting light or radiant energy. NMDCO_relaxed.owl PATO:0001430 biolink:NamedThing alkaline An medium acidity quality inhering in a solution by virtue of the bearer's a low concentration of H+ ions. NMDCO_relaxed.owl N8c1442d925c64fcf90e05d886b1ece63 biolink:NamedThing NMDCO_relaxed.owl Nc43283171c644565a67c8b5f27e8f576 biolink:NamedThing NMDCO_relaxed.owl NCBITaxon:7742 biolink:NamedThing Vertebrata NMDCO_relaxed.owl N104e9f348f2f401b896ee0ac93600963 biolink:NamedThing NMDCO_relaxed.owl N497cf0adf0484b99a9c0f3222a6e2dab biolink:NamedThing NMDCO_relaxed.owl Nf263c357bc8f46908f53e8ba21da3d26 biolink:NamedThing NMDCO_relaxed.owl Nb983201eec8f4108b1d597f8f1af5b43 biolink:NamedThing NMDCO_relaxed.owl PATO:0001400 biolink:NamedThing unipotent A cellular potency that is the capacity to produce only one differentiated cell type. NMDCO_relaxed.owl N0248ca249e8344f989d9c70bb0ec17b1 biolink:NamedThing NMDCO_relaxed.owl N5a53f6bd4b684116bd413c650a490186 biolink:NamedThing NMDCO_relaxed.owl Na59c2fd5f8194283bbac0bde4c2e69b0 biolink:NamedThing NMDCO_relaxed.owl UBERON:0000160 biolink:NamedThing intestine Segment of the alimentary canal extending from the stomach to the anus and, in humans and other mammals, consists of two segments, the small intestine and the large intestine. NMDCO_relaxed.owl UBERON:0001088 biolink:NamedThing urine Excretion that is the output of a kidney. NMDCO_relaxed.owl UBERON:0001474 biolink:NamedThing bone element Skeletal element that is composed of bone tissue. NMDCO_relaxed.owl N734998b402384fef8be114eee6e25e6c biolink:NamedThing NMDCO_relaxed.owl N3ef7e5c93b704bebbd8582305ac0790e biolink:NamedThing NMDCO_relaxed.owl UBERON:0001359 biolink:NamedThing cerebrospinal fluid A clear, colorless, bodily fluid, that occupies the subarachnoid space and the ventricular system around and inside the brain and spinal cord. NMDCO_relaxed.owl N1d3f1e2fc3bb4d61ad8d011deec5351e biolink:NamedThing NMDCO_relaxed.owl N3d06248732074cc7987e45bd15fa55ef biolink:NamedThing NMDCO_relaxed.owl Nba8179b9ca764a5ba89326a5f953c0a9 biolink:NamedThing NMDCO_relaxed.owl PATO:0001171 biolink:NamedThing elastic An elasticity quality inhering in a bearer by virtue of the bearer's ability to recover its size and shape after deformation in any way. NMDCO_relaxed.owl N4e704798c3f34a15bf2cd08fe36b3c54 biolink:NamedThing NMDCO_relaxed.owl PATO:0001977 biolink:NamedThing angular A shape quality inhering in a bearer by virtue of the bearer's having at least one salient angle on the margin. NMDCO_relaxed.owl N36fa4ddace90408aa03118fa7c49b4de biolink:NamedThing NMDCO_relaxed.owl PATO:0002478 biolink:NamedThing transversely striated A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel, that are oriented transversely relative to the long axis of the bearer. NMDCO_relaxed.owl UBERON:0004802 biolink:NamedThing respiratory tract epithelium The pseudostratified ciliated epithelium that lines much of the conducting portion of the airway, including part of the nasal cavity and larynx, the trachea, and bronchi. NMDCO_relaxed.owl Nc2b3428962c84ac3a23400d9b90f31bb biolink:NamedThing NMDCO_relaxed.owl N2e645fb5ec6f4d6fbb851f079e11ac90 biolink:NamedThing NMDCO_relaxed.owl N3201bd67ff4849c982357aac93f017e2 biolink:NamedThing NMDCO_relaxed.owl PR:000001004 biolink:NamedThing CD4 molecule A protein that is a translation product of the human CD4 gene or a 1:1 ortholog thereof. CD4 is an accessory protein for MHC class-II antigen/T-cell receptor interaction. It is the primary receptor for HIV-1. CD4 has four immunoglobulin-like domains in its extracellular region that share the same structure, but can differ in sequence. NMDCO_relaxed.owl Nb80eed8d3bd34e50b9e0243e93205411 biolink:NamedThing NMDCO_relaxed.owl Nf0684002c3a64b23bcb1840a847e8147 biolink:NamedThing NMDCO_relaxed.owl N861d813706ed47cfb233514730d11878 biolink:NamedThing NMDCO_relaxed.owl PR:000001020 biolink:NamedThing CD3 epsilon A CD3 subunit with immunoglobulin domain that is a translation product of the human CD3E gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl Nf496564dc53749849fbe357fc1a0e043 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001980 biolink:NamedThing arteriole The smallest division of the artery located between the muscular arteries and the capillaries[GO]. NMDCO_relaxed.owl Nea3676b84e6545589a4ce1c595a44108 biolink:NamedThing NMDCO_relaxed.owl Na3f61249293648b7908129659a717953 biolink:NamedThing NMDCO_relaxed.owl N9628b3371ff04ed1a14317d725dfaa87 biolink:NamedThing NMDCO_relaxed.owl N28a20241e45946eb9fb56f41dd700d99 biolink:NamedThing NMDCO_relaxed.owl PR:000001012 biolink:NamedThing integrin alpha-M An integrin alpha with A domain that is a translation product of the human ITGAM gene or a 1:1 ortholog thereof. They constitute subunits of the integrin alpha-M/beta-2 receptor. This receptor is implicated in various adhesive interactions of monocytes, macrophages and granulocytes as well as in mediating the uptake of complement-coated particles. It is also a receptor for fibrinogen, factor X and ICAM1. NMDCO_relaxed.owl N879eccc6b3c349bf98c89d23945a9a60 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001043 biolink:NamedThing esophagus Tube that connects the pharynx to the stomach. In mammals, the oesophagus connects the buccal cavity with the stomach. The stratified squamous non-keratinised epithelium lining the buccal cavity is continued through the pharynx down into the oesophagus. The lowest part of the oesophagus (ca. 2 cm) is lined with gastric mucosa and covered by peritoneum. The main body of the oesophagus is lined with small, simple mucous glands. Each gland opens into the lumen by a long duct which pierces the muscularis mucosae (Wilson and Washington, 1989). A sphincter is situated at the point where the oesophagus enters the stomach to prevent gastro-oesophageal reflux, i.e. to prevent acidic gastric contents from reaching stratified epithelia of the oesophagus, where they can cause inflammation and irritation (Wilson and Washington, 1989; Brown et al., 1993). NMDCO_relaxed.owl Nb2d872b1f8804bcd809d4892b812beae biolink:NamedThing NMDCO_relaxed.owl N633fa724073443fe894e2d33c6b89794 biolink:NamedThing NMDCO_relaxed.owl PATO:0001788 biolink:NamedThing increased mass density A density which is higher relative to the normal or average. NMDCO_relaxed.owl UBERON:0000945 biolink:NamedThing stomach An expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. A stomach is lined, in whole or in part by a glandular epithelium. NMDCO_relaxed.owl N64864605ccd74cb0935218aa315ee7a3 biolink:NamedThing NMDCO_relaxed.owl N2205589617b244ebb9f25755fa6c9ddd biolink:NamedThing NMDCO_relaxed.owl NCBITaxon:33090 biolink:NamedThing Viridiplantae NMDCO_relaxed.owl N6b0063b7e5894067988a160f011be78a biolink:NamedThing NMDCO_relaxed.owl Nce5391cb355c4975a4cdefedc0166c0b biolink:NamedThing NMDCO_relaxed.owl Nf7466546f528488d8453826fc1a39220 biolink:NamedThing NMDCO_relaxed.owl Na8b6c3ab68c14230a133665198400c95 biolink:NamedThing NMDCO_relaxed.owl N7f541692c204442a98ebb4379ae42503 biolink:NamedThing NMDCO_relaxed.owl Nce62b4a59e4a4c82890d5c0a274a0e6c biolink:NamedThing NMDCO_relaxed.owl GO:0001820 biolink:NamedThing serotonin secretion The regulated release of serotonin by a cell. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells. NMDCO_relaxed.owl PR:000001002 biolink:NamedThing CD19 molecule A protein that is a translation product of the human CD19 gene or a 1:1 ortholog thereof. It is composed of an N-terminal extracellular domain containing two Ig-like C2-type (immunoglobulin-like) domains, followed by a single-pass transmembrane segment and a cytoplasmic C-terminal tail. CD19 expression is restricted to members of the B cell lineage. It functions as a co-receptor for B-cell antigen receptor (BCR), regulating signal transduction. NMDCO_relaxed.owl Naac1a6f0f2464d0e8803a4e944f92d8e biolink:NamedThing NMDCO_relaxed.owl N82a551a167c342508e585f728abc8e03 biolink:NamedThing NMDCO_relaxed.owl N657a123b387949698cc4204314194f4d biolink:NamedThing NMDCO_relaxed.owl PATO:0001733 biolink:NamedThing evergreen (plant) A quality inhering in a plant by virtue of the bearer's disposition to retain foliage. NMDCO_relaxed.owl PR:000001084 biolink:NamedThing T-cell surface glycoprotein CD8 alpha chain A protein that is a translation product of the human CD8A gene or a 1:1 ortholog thereof. CD8 is a transmembrane that is a co-receptor for MHC class-I antigen/T-cell receptor interaction. The most common form of CD8 is composed of a CD8 alpha and a CD8 beta chain. NMDCO_relaxed.owl Na5d5ef6f41e44de8846e71b91b206254 biolink:NamedThing NMDCO_relaxed.owl Naa4c9bf25acf41f4ba0915293efb80f6 biolink:NamedThing NMDCO_relaxed.owl N7103d52ff89841d8ae7166a1fd7b51e0 biolink:NamedThing NMDCO_relaxed.owl N165b54f82b374c8fa192d6eac6f0d2cd biolink:NamedThing NMDCO_relaxed.owl Nd7e30b819e5c447f95464305d7651007 biolink:NamedThing NMDCO_relaxed.owl N839907f321c2480c98073fba93463627 biolink:NamedThing NMDCO_relaxed.owl Nbac8aa3a839744b4ace17a90f9e23736 biolink:NamedThing NMDCO_relaxed.owl PCO:0000002 biolink:NamedThing ecological community A multi-species collection of organisms of at least two different species, living in a particular area. Must have at least two populations of different species as members. NMDCO_relaxed.owl N47a4699203fb4645ba3fde8f8ca9bc6e biolink:NamedThing NMDCO_relaxed.owl Nb4ea81b5a95d41c889e173a4d0c0a7e2 biolink:NamedThing NMDCO_relaxed.owl GO:0030218 biolink:NamedThing erythrocyte differentiation The process in which a myeloid precursor cell acquires specializes features of an erythrocyte. NMDCO_relaxed.owl Nc8e37638ae9043c8ad5c9bd232a0c7bb biolink:NamedThing NMDCO_relaxed.owl Nc5382cbfa10a483a8a7e21c2c5fb0dc3 biolink:NamedThing NMDCO_relaxed.owl UBERON:0000456 biolink:NamedThing secretion of exocrine gland A portion of organism substance that is produced by exocrine glands. NMDCO_relaxed.owl Nd12dc7f5da354356aab26c03046f6b4b biolink:NamedThing NMDCO_relaxed.owl PR:000002112 biolink:NamedThing vascular endothelial growth factor receptor 2 A vascular endothelial growth factor receptor that is a translation product of the human KDR gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl PATO:0002418 biolink:NamedThing acidophilic An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for acidic dyes under specific pH conditions. NMDCO_relaxed.owl Nc5c2f06339454ccfa9a5a78668343cbe biolink:NamedThing NMDCO_relaxed.owl UBERON:0001155 biolink:NamedThing colon A portion of the large intestine before it becomes the rectum. In mammals, the colon is the most part of the large intestine, excluding the vermiform appendix, the rectum and the anal canal. NMDCO_relaxed.owl Nca767f33ea39430bba99472375f6b891 biolink:NamedThing NMDCO_relaxed.owl N3d1c803024ab48b5b47acca59342f53b biolink:NamedThing NMDCO_relaxed.owl N025099e15c9e4f01ac4da2051d86031f biolink:NamedThing NMDCO_relaxed.owl Ne159235b5f1c437fa373064bbed258e9 biolink:NamedThing NMDCO_relaxed.owl PR:000002978 biolink:NamedThing lymphocyte antigen 6G An Ly-6-like protein that is a translation product of the mouse Ly6g gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl UBERON:0005317 biolink:NamedThing pulmonary artery endothelium An pulmonary artery endothelium is an epithelium that lines the pulmonary artery[GO]. NMDCO_relaxed.owl N00bbd56173ba4a8ba299458d0060c88b biolink:NamedThing NMDCO_relaxed.owl UBERON:0002114 biolink:NamedThing duodenum The first part of the small intestine. At the junction of the stomach and the duodenum the alimentary canal is inflected. The duodenum first goes anteriorly for a short distance, turns dorsally, and eventually caudally, thus it is a U-shaped structure with two horizontal sections (a ventral and a dorsal one). NMDCO_relaxed.owl N84d402b7ae3c4c9ab848b69dc13ffc86 biolink:NamedThing NMDCO_relaxed.owl N9b0822b3ee364d4290c610441b2fda5a biolink:NamedThing NMDCO_relaxed.owl N9e3e1022e1c645a3afc06a25095fa2bf biolink:NamedThing NMDCO_relaxed.owl Ne8cf751cda2642eea5c5c930d6b5550e biolink:NamedThing NMDCO_relaxed.owl UBERON:0002094 biolink:NamedThing interventricular septum Cardiac septum which separates the right ventricle from the left ventricle.[FMA]. NMDCO_relaxed.owl N3cc04be40a734117964a9d1098c0d1de biolink:NamedThing NMDCO_relaxed.owl N7713aec4889b40ffb1b0f7ceff253b7b biolink:NamedThing NMDCO_relaxed.owl N9edfc1a330dd4ad59a047fd1a6a805d7 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001013 biolink:NamedThing adipose tissue Portion of connective tissue composed of adipocytes enmeshed in areolar tissue. NMDCO_relaxed.owl PATO:0001402 biolink:NamedThing multipotent A cellular potency that is the capacity to form multiple differentiated cell types. NMDCO_relaxed.owl Nec918240d00348088f4176193ea0d9ac biolink:NamedThing NMDCO_relaxed.owl N8e10ad792f03471cbcd856226ca54b0b biolink:NamedThing NMDCO_relaxed.owl Ne312275b054f425ba14f2e82122118fb biolink:NamedThing NMDCO_relaxed.owl Na55e76d953f048d3bd23e1efbe5e9b78 biolink:NamedThing NMDCO_relaxed.owl N6b6cd82b68d84dcb8720f6c44cb71ae2 biolink:NamedThing NMDCO_relaxed.owl UBERON:0000992 biolink:NamedThing ovary The gonad of a female organism which contains germ cells. NMDCO_relaxed.owl PATO:0070047 biolink:NamedThing polychromatophilic An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for both basic and acid stains under specific pH conditions. NMDCO_relaxed.owl N41635f71f385405eb8946949e70548d9 biolink:NamedThing NMDCO_relaxed.owl N475cc103d36f4d438af127ef6359733e biolink:NamedThing NMDCO_relaxed.owl N62ccef217e384cfa8e9e439561154ce6 biolink:NamedThing NMDCO_relaxed.owl UBERON:0007376 biolink:NamedThing outer epithelium The epidermis is the entire outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species[GO]. NMDCO_relaxed.owl UBERON:0003104 biolink:NamedThing mesenchyme Portion of tissue composed of mesenchymal cells (motile cells that develop from epthelia via an epithelial to mesenchymal transition) and surrounding extracellular material. Mesenchyme has different embryological origins in different metazoan taxa - in many invertebrates it derives in whole or part from ectoderm. In vertebrates it derives largely from mesoderm, and sometimes the terms are used interchangeably, e.g. lateral plate mesoderm/mesenchyme. NMDCO_relaxed.owl Nef2039a8edd244cf87f34926113a0bd9 biolink:NamedThing NMDCO_relaxed.owl GO:0048870 biolink:NamedThing cell motility Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another. NMDCO_relaxed.owl N68a7423a30304ebaa2b0203a99292164 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002352 biolink:NamedThing atrioventricular node An area of conducting tissue between the atria and the ventricles of the heart that conducts the normal electrical impulse from the atria to the ventricles. NMDCO_relaxed.owl GO:0048103 biolink:NamedThing somatic stem cell division The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line. NMDCO_relaxed.owl UBERON:8410050 biolink:NamedThing anorectum A subdivision of the digestive tract in humans that includes the rectum, the anal canal and the anus. NMDCO_relaxed.owl N9038e429ea9e4af4b4603f01463f06c8 biolink:NamedThing NMDCO_relaxed.owl Nb471b045e888417a9bf731a57fa2c113 biolink:NamedThing NMDCO_relaxed.owl Nebd32bf58cd749f38429ec11c12b2789 biolink:NamedThing NMDCO_relaxed.owl PATO:0000386 biolink:NamedThing hard A hardness quality of being rigid and resistant to pressure. NMDCO_relaxed.owl N669448d215274556bd3c6fffa3951c85 biolink:NamedThing NMDCO_relaxed.owl N9339f233a4e2452b909982bce67952a6 biolink:NamedThing NMDCO_relaxed.owl Nba236c50560f44d6a7b53770ab18dc8f biolink:NamedThing NMDCO_relaxed.owl Ndf03d087ac9e44e9bf6713d869d47f80 biolink:NamedThing NMDCO_relaxed.owl Nf9fe778747144dae9a7f2bd1dd0395b0 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002106 biolink:NamedThing spleen The organ that functions to filter blood and to store red corpuscles and platelets. NMDCO_relaxed.owl Ne8aa3be00d254c88874dd6b4c4282c63 biolink:NamedThing NMDCO_relaxed.owl Na893a3917a6d4c03a10238bfd0b66fe0 biolink:NamedThing NMDCO_relaxed.owl NCBITaxon:9606 biolink:NamedThing Homo sapiens NMDCO_relaxed.owl UBERON:0000172 biolink:NamedThing vomit A bodily fluid consisting of the expulsed contents of the stomach disgorged through the mouth or nose that happens as a result of a vomit reflex. NMDCO_relaxed.owl PATO:0001455 biolink:NamedThing aerobic A quality inhering in a bearer by virtue of the bearer's dependence on oxygen. NMDCO_relaxed.owl N10aa9f717e844f678c6508231cca03f7 biolink:NamedThing NMDCO_relaxed.owl N32e1925c6f2346749b54991064ada8f5 biolink:NamedThing NMDCO_relaxed.owl Ne9b06000e19c421aa766e66ae12df69b biolink:NamedThing NMDCO_relaxed.owl UBERON:0000325 biolink:NamedThing gastric gland The branched tubular glands found in the mucosa of the fundus and body of the stomach which contain parietal cells that secrete hydrochloric acid and zymogenic cells that produce pepsin. NMDCO_relaxed.owl N6082fd3b3cec4e399c18cca89135a65e biolink:NamedThing NMDCO_relaxed.owl UBERON:0001797 biolink:NamedThing vitreous humor A transparent, semigelatinous substance that fills the cavity behind the crystalline lens of the eye and in front of the retina. NMDCO_relaxed.owl PATO:0001546 biolink:NamedThing quality of a solid A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity characterized by particles arranged such that their shape and volume are relatively stable. NMDCO_relaxed.owl UBERON:0001264 biolink:NamedThing pancreas An endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating hormones[GO]. NMDCO_relaxed.owl N1bfa8c3d00cf41d0ad71f4b80370d317 biolink:NamedThing NMDCO_relaxed.owl PATO:0001456 biolink:NamedThing anaerobic A quality inhering in a bearer by virtue of the bearer's independence on oxygen. NMDCO_relaxed.owl N0ac420c35abf496fb7b90f29f03f4a9b biolink:NamedThing NMDCO_relaxed.owl UBERON:0000922 biolink:NamedThing embryo Anatomical entity that comprises the organism in the early stages of growth and differentiation that are characterized by cleavage, the laying down of fundamental tissues, and the formation of primitive organs and organ systems. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant. NMDCO_relaxed.owl PR:000001889 biolink:NamedThing CD14 molecule A protein that is a translation product of the human CD14 gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl N7315bf2595314c71bbfdcda368a9c792 biolink:NamedThing NMDCO_relaxed.owl Nd45c59589d754b6b94067bf16c0bb080 biolink:NamedThing NMDCO_relaxed.owl N08c860fc7496496aa3485b14fa29195b biolink:NamedThing NMDCO_relaxed.owl N54e0ee9455cf40a6ae95d73c2b8569d4 biolink:NamedThing NMDCO_relaxed.owl Neb53070fca6d466c88a336c52fa52c18 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001776 biolink:NamedThing optic choroid Vascular layer containing connective tissue, of the eye lying between the retina and the sclera. The choroid provides oxygen and nourishment to the outer layers of the retina. Along with the ciliary body and iris, the choroid forms the uveal tract[WP]. NMDCO_relaxed.owl N99abce7f6a4f4179a53cee908d0201b7 biolink:NamedThing NMDCO_relaxed.owl PR:000001024 biolink:NamedThing neural cell adhesion molecule 1 A neural cell adhesion molecule NCAM that is a translation product of the human NCAM1 gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl UBERON:0004664 biolink:NamedThing aorta tunica adventitia The outermost layer of the aorta wall, containing connective tissue and collagen and elastic fibers. NMDCO_relaxed.owl Nb26f8ab15a7d46079d3c3097d7ed9713 biolink:NamedThing NMDCO_relaxed.owl N371c93d74baf4d95afcad42186fa6198 biolink:NamedThing NMDCO_relaxed.owl Nfd1f555bb48d4bd19537e5ed9a7b48e3 biolink:NamedThing NMDCO_relaxed.owl Nd82d74e8a6774e6f9a94c531d5ba70b5 biolink:NamedThing NMDCO_relaxed.owl Na1a479d6212c495e9a0c8d28eb40d96a biolink:NamedThing NMDCO_relaxed.owl Nffe4bd23ba5549e09b27b055b0c99e99 biolink:NamedThing NMDCO_relaxed.owl Nb0fa469a9efe4595aeb3f960817e1706 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002084 biolink:NamedThing heart left ventricle A cardiac ventricle that is in the left side of the heart. NMDCO_relaxed.owl N81d633cf61264238a0a1718ff4df3403 biolink:NamedThing NMDCO_relaxed.owl Nf4b97c5c0dc8462bbafd95994bfd820f biolink:NamedThing NMDCO_relaxed.owl N7fbf0b6c5cac43cfa8b5f180055558e5 biolink:NamedThing NMDCO_relaxed.owl N927699f8ca7a4fd39cb7343866f28af5 biolink:NamedThing NMDCO_relaxed.owl N6a1d9377647d44bc90ec475bb132df4c biolink:NamedThing NMDCO_relaxed.owl Ne1251495085741199cc4d661ea340834 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001157 biolink:NamedThing transverse colon The proximal-distal subdivision of colon that runs transversely across the upper part of the abdomen, from the right to the left colic flexure. Continuous with the descending colon[BTO,modified]. NMDCO_relaxed.owl Nfc5b066ce6a94a5ba2746a2aa04baed3 biolink:NamedThing NMDCO_relaxed.owl Na4f81f94380f4f84a9df62a0745b38be biolink:NamedThing NMDCO_relaxed.owl N1caadd2100214931a2f2bd032a09439b biolink:NamedThing NMDCO_relaxed.owl UBERON:0000068 biolink:NamedThing embryo stage A life cycle stage that starts with fertilization and ends with the fully formed embryo. NMDCO_relaxed.owl UBERON:0010523 biolink:NamedThing microcirculatory vessel A vessel of the microcirculature, lying between the arterioles and venules; includes capillaries (blood and lymphatic), metarterioles and arteriovenous anastomoses. NMDCO_relaxed.owl N4b1845f9d349445d87171c9ae93fd5a1 biolink:NamedThing NMDCO_relaxed.owl N3ba8c1129f404b698c186efe3d268a65 biolink:NamedThing NMDCO_relaxed.owl N74583dc0677842b7bb6d93ff0680c9ea biolink:NamedThing NMDCO_relaxed.owl N26dae236757641d9a843fc7bf94064dd biolink:NamedThing NMDCO_relaxed.owl PATO:0002505 biolink:NamedThing nucleated A nucleate quality inhering in a bearer by virtue of the bearer's having one or more nucleus. NMDCO_relaxed.owl UBERON:0002062 biolink:NamedThing endocardial cushion The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves[GO]. Swellings of tissue present between the endocardial and myocardial cell layers that will give rise to the interstitial cells of the cardiac valves[ZFA]. NMDCO_relaxed.owl Ndc9adedcc31d494bb226f498489bc29f biolink:NamedThing NMDCO_relaxed.owl N65b3f5c7d30a47f99fc2e5358801c9a0 biolink:NamedThing NMDCO_relaxed.owl N1435edb25eb54681b8ae31b6b54b9516 biolink:NamedThing NMDCO_relaxed.owl PATO:0001407 biolink:NamedThing mononucleate A nucleate quality inhering in a bearer by virtue of the bearer's having one nucleus. NMDCO_relaxed.owl N8058f5c77efb414c9726bc5d91f9822b biolink:NamedThing NMDCO_relaxed.owl N89616e8c7822403d831e36dbc87be394 biolink:NamedThing NMDCO_relaxed.owl N851320a7fca847698d7de1c94a6e61d5 biolink:NamedThing NMDCO_relaxed.owl N773ae7db80ab4a4a8b8f28ff871a9d58 biolink:NamedThing NMDCO_relaxed.owl GO:0007113 biolink:NamedThing endomitotic cell cycle A mitotic cell cycle in which chromosomes are replicated and sister chromatids separate, but spindle formation, nuclear membrane breakdown and nuclear division do not occur, resulting in an increased number of chromosomes in the cell. NMDCO_relaxed.owl Nfa9c04215743421e8237879ce449f5af biolink:NamedThing NMDCO_relaxed.owl N1b0cb7ae612c4860b2f6c68a577ff3a0 biolink:NamedThing NMDCO_relaxed.owl Nf038639815154c92930ea9c6b77cd22d biolink:NamedThing NMDCO_relaxed.owl UBERON:0008339 biolink:NamedThing microvascular endothelium NMDCO_relaxed.owl PATO:0002063 biolink:NamedThing columnar A shape inhering in a bearer by virtue of the bearer's being elongated and cylindrical. NMDCO_relaxed.owl Ne57a55ae1f27420e8f08f42a76ff1500 biolink:NamedThing NMDCO_relaxed.owl GO:0160043 biolink:NamedThing catecholamine secretion, neurotransmission The regulated release of catecholamine by a cell in which the catecholamine acts as a neurotransmitter. NMDCO_relaxed.owl Nf0a6fa945ffc4c2ea1f12bcfc0704be9 biolink:NamedThing NMDCO_relaxed.owl N8b4ea6fd3fe3440990a81ac6af1a29e5 biolink:NamedThing NMDCO_relaxed.owl Na0414030d6c14bd48ef4a75fadaa4c5d biolink:NamedThing NMDCO_relaxed.owl Na480ebfcc0db4c3189c3be7a4f740294 biolink:NamedThing NMDCO_relaxed.owl N764cd88860574cb497f1f361175c0ccd biolink:NamedThing NMDCO_relaxed.owl PATO:0000586 biolink:NamedThing increased size A size quality which is relatively high. NMDCO_relaxed.owl N71bdb60979a34ca7ad7f88a8adc28db8 biolink:NamedThing NMDCO_relaxed.owl N7eb65c53196744ebb0b50c6f42131394 biolink:NamedThing NMDCO_relaxed.owl GO:0046879 biolink:NamedThing hormone secretion The regulated release of hormones, substances with a specific regulatory effect on a particular organ or group of cells. NMDCO_relaxed.owl PR:000001839 biolink:NamedThing T-cell surface glycoprotein CD5 A protein that is a translation product of the human CD5 gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl N725e39d04b324f5bb2a3b5af95fc409d biolink:NamedThing NMDCO_relaxed.owl GO:0005794 biolink:NamedThing Golgi apparatus A membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. NMDCO_relaxed.owl N0cabddcbe5ae4dcc9624e9252eb8923a biolink:NamedThing NMDCO_relaxed.owl PATO:0001645 biolink:NamedThing protruding into A quality inhering into a bearer by virtue of the bearer's extending out above or beyond its surface or boundary into the surface or boundary of another entity. NMDCO_relaxed.owl UBERON:0000970 biolink:NamedThing eye An organ that detects light. NMDCO_relaxed.owl UBERON:0001766 biolink:NamedThing anterior chamber of eyeball The space in the eye, filled with aqueous humor, and bounded anteriorly by the cornea and a small portion of the sclera and posteriorly by a small portion of the ciliary body, the iris, and part of the crystalline lens. NMDCO_relaxed.owl Nfda1b519d4574f88a9aef2fc02c0a5eb biolink:NamedThing NMDCO_relaxed.owl N1ff877cd14d54e3c81ac85c10c159419 biolink:NamedThing NMDCO_relaxed.owl Nf85ed3ab5e9e4315acb2a48f086a3ebb biolink:NamedThing NMDCO_relaxed.owl Nd28bb09a60c947e0ad0acf808874620a biolink:NamedThing NMDCO_relaxed.owl PATO:0001879 biolink:NamedThing U-shaped A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter U. NMDCO_relaxed.owl Ne185c560b86d4577ac71e51f463958e4 biolink:NamedThing NMDCO_relaxed.owl N680f7f6ee67a4d5dbaa4c8de65f57c72 biolink:NamedThing NMDCO_relaxed.owl PR:000001945 biolink:NamedThing transferrin receptor protein 1 A protein that is a translation product of the human TFRC gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl Nfb1ec1c78fbe46eaab838687014af63a biolink:NamedThing NMDCO_relaxed.owl N9e661f0000d54e2fb5645cec65cbb32a biolink:NamedThing NMDCO_relaxed.owl N801cf501379d47aaa107373016b6fb46 biolink:NamedThing NMDCO_relaxed.owl UBERON:0007177 biolink:NamedThing lamina propria of mucosa of colon A lamina propria that is part of a colonic mucosa. NMDCO_relaxed.owl UBERON:0001780 biolink:NamedThing spinal nerve The any of the paired peripheral nerves formed by the union of the dorsal and ventral spinal roots from each spinal cord segment[MP,modified]. NMDCO_relaxed.owl PR:000001083 biolink:NamedThing CD2 molecule A protein that is a translation product of the human CD2 gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl Nea1d5c577500491f8a1a6457609ff7b5 biolink:NamedThing NMDCO_relaxed.owl N3b05d0e3d30d4fa49b3757e2743907ab biolink:NamedThing NMDCO_relaxed.owl N063e9612fc8f4431bf946f08cbc6afdf biolink:NamedThing NMDCO_relaxed.owl GO:0050906 biolink:NamedThing detection of stimulus involved in sensory perception The series of events involved in sensory perception in which a sensory stimulus is received and converted into a molecular signal. NMDCO_relaxed.owl GO:0048599 biolink:NamedThing oocyte development The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl N23fada16681b4da9b9cd609fe66ee495 biolink:NamedThing NMDCO_relaxed.owl Na051946a32804f65bf0cbdfe4bb33e75 biolink:NamedThing NMDCO_relaxed.owl PATO:0002212 biolink:NamedThing slender A shape quality inhering in a bearer by virtue of the bearer's being small or narrow in circumference or width in proportion to length or height. NMDCO_relaxed.owl N38fcb5fe31b04f01b03237eafbd031d5 biolink:NamedThing NMDCO_relaxed.owl Nec5577f7157c42779ca606b184b3f538 biolink:NamedThing NMDCO_relaxed.owl N8660780db6364b31bdf3e6d5f6cdb31c biolink:NamedThing NMDCO_relaxed.owl N0a7db2eb4b6d49318553c0824fcb95cd biolink:NamedThing NMDCO_relaxed.owl GO:0061533 biolink:NamedThing norepinephrine secretion, neurotransmission The regulated release of norepinephrine by a cell, in which the norepinephrine acts as a neurotransmitter. NMDCO_relaxed.owl N7c622bd286ca4c919cd756fa077e03ce biolink:NamedThing NMDCO_relaxed.owl Ncd355882d88f4f159f6e02b6e600a640 biolink:NamedThing NMDCO_relaxed.owl Nf0e37910622242d39c97562d53786e8d biolink:NamedThing NMDCO_relaxed.owl N88d508743c944795ab60facaf8feb5ad biolink:NamedThing NMDCO_relaxed.owl UBERON:0004638 biolink:NamedThing blood vessel endothelium An endothelium that lines the blood vasculature. Other endothelia may line lymph vessels, the heart. NMDCO_relaxed.owl UBERON:0003059 biolink:NamedThing presomitic mesoderm Unsegmented field of paraxial mesoderm present posterior to the most recently formed somite pair, from which somites will form. NMDCO_relaxed.owl N93fd1232ad0f41efa075dd49c4ad6855 biolink:NamedThing NMDCO_relaxed.owl Neab8b0dd50bf4aadb8e160c6b6bb0775 biolink:NamedThing NMDCO_relaxed.owl N3c8f2bfd77d54166ab80dfb25c563bc9 biolink:NamedThing NMDCO_relaxed.owl N241ed08a51464afe8415610b25a53185 biolink:NamedThing NMDCO_relaxed.owl N10a6a8e9de944c83aa8919eca50832e0 biolink:NamedThing NMDCO_relaxed.owl N23dd5bcf337243468d8752da6ff68cf7 biolink:NamedThing NMDCO_relaxed.owl N8f8143a59e5b45f2b1b4f99d1d91c165 biolink:NamedThing NMDCO_relaxed.owl Nac4e84a554f4447085ab2655228c84ba biolink:NamedThing NMDCO_relaxed.owl Nb2c6bb4dd1244941b2f850494b4a2b9f biolink:NamedThing NMDCO_relaxed.owl Ne25255ee425a42daaf60412c23102d60 biolink:NamedThing NMDCO_relaxed.owl Neec975df63514773b4586394d79d3c2b biolink:NamedThing NMDCO_relaxed.owl N031ebc0341ca426bb4660d06fa4e54b7 biolink:NamedThing NMDCO_relaxed.owl N0d7a1a37598044459207c946a9a05ce8 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001638 biolink:NamedThing vein Any of the tubular branching vessels that carry blood from the capillaries toward the heart. NMDCO_relaxed.owl PATO:0001646 biolink:NamedThing protruding out of A quality inhering into a bearer by virtue of the bearer's extending out above or beyond its surface or boundary and outwards in relation to the physical space occupied by another entity. NMDCO_relaxed.owl Ne595f5bf14f64787a21c41238236714e biolink:NamedThing NMDCO_relaxed.owl Ne0a99359544d4b89b931e7aeb518b464 biolink:NamedThing NMDCO_relaxed.owl PATO:0001657 biolink:NamedThing increased osmolarity A osmolarity which is relatively high. NMDCO_relaxed.owl Nb939b20f0a4d4ecbb5a00f0cad6fe2b3 biolink:NamedThing NMDCO_relaxed.owl Na53d68704d7b4d8b802f4da03b6aed91 biolink:NamedThing NMDCO_relaxed.owl N80a2750dc3754e0b8266f82ea3e2fc47 biolink:NamedThing NMDCO_relaxed.owl N98e9308b71e84fbbbf7452071529babe biolink:NamedThing NMDCO_relaxed.owl N09a9b6176b244f7992efe5bede4a8acc biolink:NamedThing NMDCO_relaxed.owl Nf9a6c252d54a4c658a58c92706e97437 biolink:NamedThing NMDCO_relaxed.owl N75234def17e54edd975f85a504dcb44b biolink:NamedThing NMDCO_relaxed.owl Nc7bc454a9a1545b489bb9a2d21b73303 biolink:NamedThing NMDCO_relaxed.owl PATO:0000609 biolink:NamedThing closure incomplete A morphological quality inhering in a bearer by virtue of the bearer's affording not completed blocked passage or view. NMDCO_relaxed.owl N4c394a6c2aff4a49af76a9ae45901979 biolink:NamedThing NMDCO_relaxed.owl N042fe2d1479946b4b7244d2896884ace biolink:NamedThing NMDCO_relaxed.owl UBERON:0011189 biolink:NamedThing lamina propria of large intestine A lamina propria that is part of a large intestine. NMDCO_relaxed.owl N430788ba0d014133a46fd1c2dda3e407 biolink:NamedThing NMDCO_relaxed.owl Nbde56486c1464eef92314998776d9e44 biolink:NamedThing NMDCO_relaxed.owl PR:000001289 biolink:NamedThing membrane-spanning 4-domains subfamily A member 1 A protein that is a translation product of the human MS4A1 gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl N5d3e8f19eefa41dd856c112c7bfb6094 biolink:NamedThing NMDCO_relaxed.owl N125b9f688cea4ac295616977c19a1673 biolink:NamedThing NMDCO_relaxed.owl N7aa536f0cc0f4364af9fe9bbbe8ccdc4 biolink:NamedThing NMDCO_relaxed.owl Ncb915edce3064e919decaabacf700e77 biolink:NamedThing NMDCO_relaxed.owl NCBITaxon:7705 biolink:NamedThing Holothuroidea NMDCO_relaxed.owl N1456bbc4b0f14f818cc82cdf63c561f0 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001153 biolink:NamedThing caecum A pouch in the digestive tract that connects the ileum with the ascending colon of the large intestine. It is separated from the ileum by the ileocecal valve, and is the beginning of the large intestine. It is also separated from the colon by the cecocolic junction. NMDCO_relaxed.owl N3e32d75cd31d4c7ea265b46436552b75 biolink:NamedThing NMDCO_relaxed.owl Nf952cb04ae3240949df8b5a25975f228 biolink:NamedThing NMDCO_relaxed.owl N3e2633dff0c5454c8eb3dc20435fceb3 biolink:NamedThing NMDCO_relaxed.owl UBERON:0009015 biolink:NamedThing upper back skin A zone of skin that is part of a dorsal thoracic segment of trunk. NMDCO_relaxed.owl PATO:0002253 biolink:NamedThing platelike A quality inhering in a bearer by virtue of the bearer's being roundish, flattish shape, possibly with a slightly angled edge. NMDCO_relaxed.owl N6026fe718dc14b6fb33c45d394636370 biolink:NamedThing NMDCO_relaxed.owl Ncc693e5770554b69b811bfd1b65e2940 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001032 biolink:NamedThing sensory system Anatomical system that overlaps the nervous system and is responsible for receiving and processing sensory information. NMDCO_relaxed.owl UBERON:0001533 biolink:NamedThing subclavian artery One of two laterally paired arteries that supplies the pectoral appendages, usually branching from the dorsal aorta. NMDCO_relaxed.owl UBERON:0002108 biolink:NamedThing small intestine Subdivision of digestive tract that connects the stomach to the large intestine and is where much of the digestion and absorption of food takes place (with the exception of ruminants). The mammalian small intestine is long and coiled and can be differentiated histologically into: duodenum, jejunem, ileum[WP,cjm,Kardong]. NMDCO_relaxed.owl Naecde12893cd4e4080e867536022a071 biolink:NamedThing NMDCO_relaxed.owl N55c42f03ca6048e3a4a73d1f8b807956 biolink:NamedThing NMDCO_relaxed.owl N1dc171f567b04244a4b03b3d1658c589 biolink:NamedThing NMDCO_relaxed.owl Ne8a1d2aecd71410f997255374f8d6ac1 biolink:NamedThing NMDCO_relaxed.owl N35f6d75b46bd43159e6848075a661df9 biolink:NamedThing NMDCO_relaxed.owl Nb2388ef39cd5488cbd2e83803497cce8 biolink:NamedThing NMDCO_relaxed.owl N05621d83cfb8405b97539a16ec5ca6e0 biolink:NamedThing NMDCO_relaxed.owl GO:0001667 biolink:NamedThing ameboidal-type cell migration Cell migration that is accomplished by extension and retraction of a pseudopodium. NMDCO_relaxed.owl UBERON:0001891 biolink:NamedThing midbrain The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO]. NMDCO_relaxed.owl N658ae025496a43fb96c1f1dc1a717739 biolink:NamedThing NMDCO_relaxed.owl UBERON:0004997 biolink:NamedThing mucosa of pyloric antrum A mucosa that is part of a pyloric antrum [Automatically generated definition]. NMDCO_relaxed.owl Na2bfa7730e0a4f899265dc312202da6d biolink:NamedThing NMDCO_relaxed.owl Nfee966792a204ebc9910c2427b75489c biolink:NamedThing NMDCO_relaxed.owl N10325bb18df346f78e394826d6004020 biolink:NamedThing NMDCO_relaxed.owl N3b8684a6e12f402b8b17a565d613bf06 biolink:NamedThing NMDCO_relaxed.owl PATO:0000964 biolink:NamedThing transparent A optical quality inhering in a bearer by virtue of the bearer's lacking opacity. NMDCO_relaxed.owl PATO:0001908 biolink:NamedThing multinucleate A nucleate quality inhering in a bearer by virtue of the bearer's having more than one nucleus. NMDCO_relaxed.owl Nf4be8161a41c4dd1a0788c3c92f69430 biolink:NamedThing NMDCO_relaxed.owl N0b594720af1e4844a55d032bf9f82010 biolink:NamedThing NMDCO_relaxed.owl UBERON:0004822 biolink:NamedThing extrahepatic bile duct epithelium An epithelium that is part of a extrahepatic bile duct [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001979 biolink:NamedThing venule One of the minute vessels that collect deoxygenated blood from the capillary plexuses returns it to the veins. NMDCO_relaxed.owl N592d91ac0ba041af9d9f85630479c75a biolink:NamedThing NMDCO_relaxed.owl UBERON:0000175 biolink:NamedThing pleural effusion Pleural effusion is a bodily fluid that is produced in exess and accumulates in the pleural cavity, the fluid-filled space that surrounds the lungs. Excessive amounts of such fluid can impair breathing by limiting the expansion of the lungs during inhalation. NMDCO_relaxed.owl N6f5304b035414302960c99403e28458d biolink:NamedThing NMDCO_relaxed.owl N3945492fe3084b5893d29878dadcb12c biolink:NamedThing NMDCO_relaxed.owl UBERON:0001238 biolink:NamedThing lamina propria of small intestine Lamina propria that is part_of the small intestine. NMDCO_relaxed.owl UBERON:0001902 biolink:NamedThing epithelium of small intestine An epithelium that is part of a small intestine [Automatically generated definition]. NMDCO_relaxed.owl Nfe9fe97a81ff4efaa9caab1cf36ea3ee biolink:NamedThing NMDCO_relaxed.owl Nbc6d81e344ad4404bb898aa36822add1 biolink:NamedThing NMDCO_relaxed.owl N44e47781e0974e5988c2adfd3f35ff7c biolink:NamedThing NMDCO_relaxed.owl N266a24421db44e0d961c1930dd59d07d biolink:NamedThing NMDCO_relaxed.owl N24dcb819af7c45188ac78e255bbe6ca0 biolink:NamedThing NMDCO_relaxed.owl Nffaa864946f7468196e2e3e8ada97f98 biolink:NamedThing NMDCO_relaxed.owl N80f46bd6bfbf48ceac118afa52c0dd6a biolink:NamedThing NMDCO_relaxed.owl N51229de8fbf047f3b60a27d362685497 biolink:NamedThing NMDCO_relaxed.owl Ndb5ec45a03a94887a2ee26a28288e914 biolink:NamedThing NMDCO_relaxed.owl N6ec3daadd495466e908bf2a30711136b biolink:NamedThing NMDCO_relaxed.owl N8d5f4a5a129e4281b3349bc2dcc13915 biolink:NamedThing NMDCO_relaxed.owl N4c80127f34ef4b6b9b6a3b47a206afbb biolink:NamedThing NMDCO_relaxed.owl N2da7552633be488994e90a817b6db401 biolink:NamedThing NMDCO_relaxed.owl Nb815f4a6ff1442b2bd84305c2f3358f6 biolink:NamedThing NMDCO_relaxed.owl UBERON:0000059 biolink:NamedThing large intestine A subdivision of the digestive tract that connects the small intestine to the cloaca or anus. Lacks or has few villi[Kardong]. NMDCO_relaxed.owl Nea0b7c1519e54cb5ae64397f1ac3da15 biolink:NamedThing NMDCO_relaxed.owl GO:0014055 biolink:NamedThing acetylcholine secretion, neurotransmission The regulated release of acetylcholine by a cell. The acetylcholine acts as a neurotransmitter that acts in both the peripheral nervous system (PNS) and central nervous system (CNS). NMDCO_relaxed.owl PATO:0001422 biolink:NamedThing dead A viability quality inhering in a bearer by virtue of the cessation of the bearer's life. NMDCO_relaxed.owl Nd41b7184b4eb4ac8bad08d5e463e53c6 biolink:NamedThing NMDCO_relaxed.owl Nba8e775ce687453f87161751fe7c0a27 biolink:NamedThing NMDCO_relaxed.owl N0e90f37e484d446cbb8ff34e3475ec9b biolink:NamedThing NMDCO_relaxed.owl Nd85d21305d444e88a22d4688f9e7df9d biolink:NamedThing NMDCO_relaxed.owl N710ed248950d4f1cb1a241bba54b5d68 biolink:NamedThing NMDCO_relaxed.owl N32b8564818644430a733f71dd8507b0d biolink:NamedThing NMDCO_relaxed.owl N68d417ccada445ab9e34b3c7ec3238b2 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002081 biolink:NamedThing cardiac atrium Cardiac chamber in which blood enters the heart. NMDCO_relaxed.owl Na2decc8852324ff2bd1dc87d7771be96 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001917 biolink:NamedThing endothelium of artery An endothelium that is part of an artery [Automatically generated definition]. NMDCO_relaxed.owl Na468d4bb228e477a834cc3e99f51e5d6 biolink:NamedThing NMDCO_relaxed.owl N289777e89e3d43b990266389e130d21b biolink:NamedThing NMDCO_relaxed.owl UBERON:1000021 biolink:NamedThing skin of face A zone of skin that is part of the face. NMDCO_relaxed.owl Nda1f543af8194fda9748efa16f5f3739 biolink:NamedThing NMDCO_relaxed.owl N992a46eeee8f4cd6bc528204e78e1374 biolink:NamedThing NMDCO_relaxed.owl N88b8a3cd67894d0fb46d87406361d3b9 biolink:NamedThing NMDCO_relaxed.owl N311281194e8244bca5b0b91af602dd24 biolink:NamedThing NMDCO_relaxed.owl N4ad79317f4334a13899aa264d764d0f1 biolink:NamedThing NMDCO_relaxed.owl N9616f233836f486eb0994f66b4cc4950 biolink:NamedThing NMDCO_relaxed.owl N06907e69b6854316a367dfcca0d6f5f5 biolink:NamedThing NMDCO_relaxed.owl N9e4abbc3da474dc2934b6aa5376819c8 biolink:NamedThing NMDCO_relaxed.owl N7823025e619e412eb86cea45363c671d biolink:NamedThing NMDCO_relaxed.owl Nb6afd74688a948308c096d8dc08f3d49 biolink:NamedThing NMDCO_relaxed.owl N8cab6703dcc54fca97b2580a366c6871 biolink:NamedThing NMDCO_relaxed.owl N24b8c99e3a4d4115886fbbb9e74ac9e9 biolink:NamedThing NMDCO_relaxed.owl UBERON:0000115 biolink:NamedThing lung epithelium The epithelial layer of the lung. NMDCO_relaxed.owl Nd339274c08ed4f1cb0418128f5c9b70e biolink:NamedThing NMDCO_relaxed.owl N1b3fc74be3ff401dad0cf85583120892 biolink:NamedThing NMDCO_relaxed.owl N1dd60408fda74975888d2b3dc6a13557 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001915 biolink:NamedThing endothelium of capillary An endothelium that is part of a capillary [Automatically generated definition]. NMDCO_relaxed.owl N40f40698bf744b888b918bccdb8b3d9a biolink:NamedThing NMDCO_relaxed.owl Nbd8ba96e5533420aafb93807e3ef2d90 biolink:NamedThing NMDCO_relaxed.owl N1d1ad5bbe17e4dcaa66f20e7d920668c biolink:NamedThing NMDCO_relaxed.owl Nbddc114c633c48cea037077fff1de1ae biolink:NamedThing NMDCO_relaxed.owl N3dd4fe98af804bbbbf9e678a76d12e31 biolink:NamedThing NMDCO_relaxed.owl N41c8af72beec4d538a273394844d6a4e biolink:NamedThing NMDCO_relaxed.owl PATO:0000587 biolink:NamedThing decreased size A size quality which is relatively low. NMDCO_relaxed.owl UBERON:0004684 biolink:NamedThing raphe nuclei The raphe nuclei are thin plates of cells in and immediately adjacent to the sagittal plane. NMDCO_relaxed.owl N5c65adc12e724283ac2dc8d804d2b5be biolink:NamedThing NMDCO_relaxed.owl N0008e78e6f734a8f9ccdc9acb63983dd biolink:NamedThing NMDCO_relaxed.owl N74b2bd579cf640599d1206ff9c8968e5 biolink:NamedThing NMDCO_relaxed.owl N63df0df260a5486ebb9335ac552ae553 biolink:NamedThing NMDCO_relaxed.owl N4a1d3e8e1d5247fa87400fa04475085f biolink:NamedThing NMDCO_relaxed.owl N7826f8528c724bcdb82ba5b811484fa4 biolink:NamedThing NMDCO_relaxed.owl N72741769e7644c989ec3eaea6d733bf1 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002424 biolink:NamedThing oral epithelium An epithelium that is part of the mouth and lines the oral cavity, typically stratified squamous, and may be para-, ortho- or non- keratinized. Primary barrier between oral environment and deeper tissues. NMDCO_relaxed.owl Na54ef06c3c0d4dc4af6c5db58f67c318 biolink:NamedThing NMDCO_relaxed.owl GO:0017145 biolink:NamedThing stem cell division The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types. NMDCO_relaxed.owl Ne1333356ffa74a428a70b08ca1c77ac8 biolink:NamedThing NMDCO_relaxed.owl N03d13bb068d549faa4011dbff98efb4e biolink:NamedThing NMDCO_relaxed.owl NCBITaxon:4751 biolink:NamedThing Fungi NMDCO_relaxed.owl UBERON:0002012 biolink:NamedThing pulmonary artery An artery that carries deoxygenated blood from heart to the lungs. They are the only arteries (other than umbilical arteries in the fetus) that carry deoxygenated blood.. NMDCO_relaxed.owl N29725cfdbfb74e82beff85d03ed29068 biolink:NamedThing NMDCO_relaxed.owl GO:0035935 biolink:NamedThing androgen secretion The regulated release of an androgen into the circulatory system. Androgens are steroid hormones that stimulate or control the development and maintenance of masculine characteristics in vertebrates. NMDCO_relaxed.owl N743c8a2b6fcc4401a57689bef560c4d7 biolink:NamedThing NMDCO_relaxed.owl N848a9dfe99b34f859a90248b4bd996a1 biolink:NamedThing NMDCO_relaxed.owl Nd2894314cf5345d1ad8bf521cdb1bf6d biolink:NamedThing NMDCO_relaxed.owl N15a5a81213be4acab17eca07e2cfd76c biolink:NamedThing NMDCO_relaxed.owl UBERON:0001003 biolink:NamedThing skin epidermis The outer epithelial layer of the skin that is superficial to the dermis. NMDCO_relaxed.owl N9b45354c0f32411ab0f1358e46dca37e biolink:NamedThing NMDCO_relaxed.owl UBERON:0001988 biolink:NamedThing feces Portion of semisolid bodily waste discharged through the anus[MW,modified]. NMDCO_relaxed.owl N8ff87f25acf8432bb4120727f4550307 biolink:NamedThing NMDCO_relaxed.owl N10ed6d2108c2474fb03e888d7fea6cae biolink:NamedThing NMDCO_relaxed.owl GO:0005730 biolink:NamedThing nucleolus A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. NMDCO_relaxed.owl Ndaf67e63b133429792c08453340ab146 biolink:NamedThing NMDCO_relaxed.owl N9556d57d413b47adb20db2ce8a5b189c biolink:NamedThing NMDCO_relaxed.owl UBERON:0000926 biolink:NamedThing mesoderm The middle germ layer of the embryo, between the endoderm and ectoderm. NMDCO_relaxed.owl N40850a7a670e436e8f2e6476d251ca95 biolink:NamedThing NMDCO_relaxed.owl PATO:0001406 biolink:NamedThing binucleate A nucleate quality inhering in a bearer by virtue of the bearer's having two nuclei. NMDCO_relaxed.owl GO:0015106 biolink:NamedThing bicarbonate transmembrane transporter activity Enables the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3-. NMDCO_relaxed.owl Ne88789966c31453db60064fd9757085b biolink:NamedThing NMDCO_relaxed.owl N474730fb994544219a1d344378e17b9c biolink:NamedThing NMDCO_relaxed.owl N6a7fb9a6a5b7401183a811a8797c83f8 biolink:NamedThing NMDCO_relaxed.owl UBERON:0000916 biolink:NamedThing abdomen The subdivision of the vertebrate body between the thorax and pelvis. The ventral part of the abdomen contains the abdominal cavity and visceral organs. The dorsal part includes the abdominal section of the vertebral column. NMDCO_relaxed.owl UBERON:0005396 biolink:NamedThing carotid artery segment One of: the common carotid artery, or its branches, the external and internal carotid arteries. NMDCO_relaxed.owl UBERON:0001434 biolink:NamedThing skeletal system Anatomical system that is a multi-element, multi-tissue anatomical cluster that consists of the skeleton and the articular system. NMDCO_relaxed.owl N605d7dba3f254674b7af464c838ca180 biolink:NamedThing NMDCO_relaxed.owl Nccef61d8269e4d999d075d1137c7b902 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001558 biolink:NamedThing lower respiratory tract The segment of the respiratory tract that starts proximally with the trachea and includes all distal structures including the lungs[WP,modified]. NMDCO_relaxed.owl N1fa95129c6154228859d737a133d3c2d biolink:NamedThing NMDCO_relaxed.owl N9fe5c766d7c544159b7e9d6b774106be biolink:NamedThing NMDCO_relaxed.owl N7a779d655c854a85a069b638198c36fe biolink:NamedThing NMDCO_relaxed.owl UBERON:0000478 biolink:NamedThing extraembryonic structure A multicellular anatomical structure that is associated with an embryo and derived from the zygote from which it develops, but which does not contribute to the embryo proper or to structures that are part of the same organism after embryogenesis. NMDCO_relaxed.owl Nef96bb8cefb640f8b81f24231fac78f8 biolink:NamedThing NMDCO_relaxed.owl Nfc510e542434474bba13c30e5dff19d6 biolink:NamedThing NMDCO_relaxed.owl PATO:0001545 biolink:NamedThing inflexible A physical quality inhering in a bearer by virtue of the bearer's inability of being turned, bowed, or twisted without breaking. NMDCO_relaxed.owl NCBITaxon:2759 biolink:NamedThing Eukaryota NMDCO_relaxed.owl N3780d8962c8241e18edcea842b79bd24 biolink:NamedThing NMDCO_relaxed.owl N2969576567e446debc2284eea911787a biolink:NamedThing NMDCO_relaxed.owl N273f5c87ecbc40349b533f31bfcfdb54 biolink:NamedThing NMDCO_relaxed.owl N0822895161f441629ee99d95ad6ffc8e biolink:NamedThing NMDCO_relaxed.owl N5df05de8cf9d404681b99a5cb7b881e0 biolink:NamedThing NMDCO_relaxed.owl GO:0009566 biolink:NamedThing fertilization The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy). NMDCO_relaxed.owl N282a3c606eec46dbbc380df9f63389b8 biolink:NamedThing NMDCO_relaxed.owl N80c97ab93aed4dc494174a4effe3ea3d biolink:NamedThing NMDCO_relaxed.owl N75fdcb0e1b74433a94eb16f99b6f9c2b biolink:NamedThing NMDCO_relaxed.owl N9d055f20996d4fec989ee1605364843b biolink:NamedThing NMDCO_relaxed.owl UBERON:0004823 biolink:NamedThing intrahepatic bile duct epithelium An epithelium that is part of a intrahepatic bile duct [Automatically generated definition]. NMDCO_relaxed.owl Ne50ed9d01e694f0fadccfe278021fdaf biolink:NamedThing NMDCO_relaxed.owl N148e2c5606a04d8bbce8862eb01d925a biolink:NamedThing NMDCO_relaxed.owl PATO:0000998 biolink:NamedThing viscous A viscosity quality inhering in a bearer by virtue of the bearer's having viscosity. NMDCO_relaxed.owl Nace12ca8b2f144e786ce8de76e8f8a13 biolink:NamedThing NMDCO_relaxed.owl Nf939b96bad844a2f9c965a60458e8e4d biolink:NamedThing NMDCO_relaxed.owl UBERON:0003354 biolink:NamedThing epithelium of rectum An epithelium that is part of a rectum [Automatically generated definition]. NMDCO_relaxed.owl Nf3b7e0df19724137b07ac7628a2a86a6 biolink:NamedThing NMDCO_relaxed.owl GO:0050907 biolink:NamedThing detection of chemical stimulus involved in sensory perception The series of events in which a chemical stimulus is received and converted into a molecular signal as part of sensory perception. NMDCO_relaxed.owl N3fea7e3cb9204251baf4d18f73cbd12e biolink:NamedThing NMDCO_relaxed.owl Nca5ac1a939204ca89991ad3e4fb8724e biolink:NamedThing NMDCO_relaxed.owl PATO:0002039 biolink:NamedThing biconcave A concave quality inhering in a bearer by virtue of the bearer's curving inward on both sides or surfaces. NMDCO_relaxed.owl Nbd6a60974a0d43bba437258ae55a69e5 biolink:NamedThing NMDCO_relaxed.owl GO:0070254 biolink:NamedThing mucus secretion The regulated release of mucus by the mucosa. Mucus is a viscous slimy secretion consisting of mucins and various inorganic salts dissolved in water, with suspended epithelial cells and leukocytes. The mucosa, or mucous membrane, is the membrane covered with epithelium that lines the tubular organs of the body. Mucins are carbohydrate-rich glycoproteins that have a lubricating and protective function. NMDCO_relaxed.owl N0dceb8c3fdcb40e5b6143972db59e29e biolink:NamedThing NMDCO_relaxed.owl UBERON:0002410 biolink:NamedThing autonomic nervous system The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands[GO]. NMDCO_relaxed.owl GO:0002244 biolink:NamedThing hematopoietic progenitor cell differentiation The process in which precursor cell type acquires the specialized features of a hematopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells. NMDCO_relaxed.owl N9690a55b1cd544fe94cbd411393538e0 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002521 biolink:NamedThing elastic tissue Connective tissue composed of elastic fibers. NMDCO_relaxed.owl N1a4cd072fb7643a5bf49f7f2f2e52e18 biolink:NamedThing NMDCO_relaxed.owl UBERON:0013697 biolink:NamedThing exocrine pancreas epithelium Epithelium lining the exocrine pancreas. NMDCO_relaxed.owl N59c28f558a1446278c5e45e73a67f9e3 biolink:NamedThing NMDCO_relaxed.owl N275c4a9cacc940b0a61b5c61a8ac92d7 biolink:NamedThing NMDCO_relaxed.owl N2f532c4d8b9f469db88b415037f743a9 biolink:NamedThing NMDCO_relaxed.owl Nd1b0993794424de9bc08eb3c1d9298f2 biolink:NamedThing NMDCO_relaxed.owl PATO:0001429 biolink:NamedThing acidic An medium acidity quality inhering in a solution by virtue of the bearer's a high concentration of H+ ions. NMDCO_relaxed.owl Ndb8947347ddc4f5d8f0e9aeb8c2032bb biolink:NamedThing NMDCO_relaxed.owl N5cb85e70d0184e8bb000c9f9d4ef86d4 biolink:NamedThing NMDCO_relaxed.owl PATO:0000608 biolink:NamedThing closed A morphological quality inhering in a bearer by virtue of the bearer's affording blocked passage or view. NMDCO_relaxed.owl GO:0030219 biolink:NamedThing megakaryocyte differentiation The process in which a myeloid precursor cell acquires specializes features of a megakaryocyte. NMDCO_relaxed.owl N5210f51e28e34ae788389c3dcdbb9413 biolink:NamedThing NMDCO_relaxed.owl N0a97198c34554cc0becdc6e056293dd7 biolink:NamedThing NMDCO_relaxed.owl Nc9ba1fdb308e4c43b525715a6897fb88 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002257 biolink:NamedThing ventral horn of spinal cord The ventral grey column of the spinal cord[MP]. The neurons of the ventral region of the mature spinal cord participate in motor output[GO]. NMDCO_relaxed.owl GO:0070091 biolink:NamedThing glucagon secretion The regulated release of glucagon from secretory granules in the A (alpha) cells of the pancreas (islets of Langerhans). NMDCO_relaxed.owl N2a5a613044734a8f93b941850a3f50bc biolink:NamedThing NMDCO_relaxed.owl N200c3414056d4daab7497686039e3408 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001639 biolink:NamedThing hepatic portal vein A portal vein that transports nutrients from the digestive tract to the liver[Kardong]. NMDCO_relaxed.owl N637e53b7da8f4adc8b262d473a2e6bc6 biolink:NamedThing NMDCO_relaxed.owl GO:0030141 biolink:NamedThing secretory granule A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules. NMDCO_relaxed.owl PATO:0002219 biolink:NamedThing fan-shaped A quality inhering in a bearer that is shaped in the form of a fan. NMDCO_relaxed.owl UBERON:0009842 biolink:NamedThing glandular acinus The many-lobed berry cluster of cells that is the terminous of a gland where the secretion is produced is acinar in form. NMDCO_relaxed.owl N1e7190f800ac40b3af3d0b673fce9caa biolink:NamedThing NMDCO_relaxed.owl N843a3c384b6c42c6b1a843db97c6b010 biolink:NamedThing NMDCO_relaxed.owl GO:0009306 biolink:NamedThing protein secretion The controlled release of proteins from a cell. NMDCO_relaxed.owl N5f4744ef54b4459caa42329fbcb26372 biolink:NamedThing NMDCO_relaxed.owl N52f3bf4c1faf4ef382b9abd7862bea92 biolink:NamedThing NMDCO_relaxed.owl N2d0c57ddde5b4d2ab5b08a5513038b98 biolink:NamedThing NMDCO_relaxed.owl N03176d24f5fe442db501523f3dd24150 biolink:NamedThing NMDCO_relaxed.owl N9dd987f7265647ac8a9bf1b2226c73e4 biolink:NamedThing NMDCO_relaxed.owl N5547f7b932af40e7a0194c8895be3190 biolink:NamedThing NMDCO_relaxed.owl N1c9a66a1949e4cceb7792b0273ebc8b7 biolink:NamedThing NMDCO_relaxed.owl Nfa0846865e6d4202b893480573da0901 biolink:NamedThing NMDCO_relaxed.owl N6cc9a534fc824f19b8e4b2fbddab4e1b biolink:NamedThing NMDCO_relaxed.owl GO:0071971 biolink:NamedThing extracellular exosome assembly The aggregation, arrangement and bonding together of a set of components to form an extracellular vesicular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Exosomes are defined by their size, which generally ranges from 30 nm to 100 nm. NMDCO_relaxed.owl Nd71ca8c8a6b4457f96f5944c30c6a912 biolink:NamedThing NMDCO_relaxed.owl PATO:0001731 biolink:NamedThing deciduous (plant) A quality inhering in a plant by virtue of the bearer's disposition to shed foliage. NMDCO_relaxed.owl N42cd4fd4e29b47289dfdb03b9bcc8e55 biolink:NamedThing NMDCO_relaxed.owl N589821f35b784593933dd627f6990fd3 biolink:NamedThing NMDCO_relaxed.owl GO:0015979 biolink:NamedThing photosynthesis NMDCO_relaxed.owl Ndd31bf8f800f4166870ddbc27b9dab21 biolink:NamedThing NMDCO_relaxed.owl Nfb06b6a45b30454986f622a74aa7c363 biolink:NamedThing NMDCO_relaxed.owl N9b2eb5b026784b7db29c1fa875b3d881 biolink:NamedThing NMDCO_relaxed.owl UBERON:0000010 biolink:NamedThing peripheral nervous system A major division of the nervous system that contains nerves which connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands. NMDCO_relaxed.owl N995fa1c7d12749d39c9cf9e34e65a18e biolink:NamedThing NMDCO_relaxed.owl N5eeb085282784751bc4ca3232b84a042 biolink:NamedThing NMDCO_relaxed.owl Nb8347823cb3a4f818f828e407056cb6b biolink:NamedThing NMDCO_relaxed.owl UBERON:0006799 biolink:NamedThing glandular epithelium An epithelium that is composed primarily of secretory cells. NMDCO_relaxed.owl UBERON:0004088 biolink:NamedThing orbital region The subdivision of the face that includes the eye (eyeball plus adnexa such as eyelids) and the orbit of the skull and associated parts of the face such as the eyebrows, if present. NMDCO_relaxed.owl Na889a7a018004fe3910d0ddc6d469027 biolink:NamedThing NMDCO_relaxed.owl N2454e7c0bba545349f7937211accc62d biolink:NamedThing NMDCO_relaxed.owl N8f7d2654a7114d6c93e5736cc4623e34 biolink:NamedThing NMDCO_relaxed.owl PATO:0002143 biolink:NamedThing sloped downward NMDCO_relaxed.owl UBERON:0002351 biolink:NamedThing sinoatrial node The part of the cardiac conduction system that controls the timing of heart muscle contraction. It relays electrical signals to the AV node[GO]. Subdivision of conducting system of heart at the junction of the right atrium and the superior vena cava, around the sinoatrial nodal branch of right coronary artery and is continuous with the internodal tract[FMA]. NMDCO_relaxed.owl N973d8e91d8a9495babf07da718e70596 biolink:NamedThing NMDCO_relaxed.owl N290b74640a8b45e1803ea0f404d71e3a biolink:NamedThing NMDCO_relaxed.owl N9cc51aa1d43a46deb9ebef75fa6a2a5f biolink:NamedThing NMDCO_relaxed.owl UBERON:0000102 biolink:NamedThing lung vasculature The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs[GO]. NMDCO_relaxed.owl N8caed3f78bc84533b7faca026558ee6d biolink:NamedThing NMDCO_relaxed.owl Ndd6b9f984a9242cd945cdbbc4544d5a7 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001004 biolink:NamedThing respiratory system Functional system which consists of structures involved in respiration. NMDCO_relaxed.owl PO:0025034 biolink:NamedThing leaf A phyllome (PO:0006001) that is not associated with a reproductive structure. NMDCO_relaxed.owl GO:0030154 biolink:NamedThing cell differentiation The cellular developmental process in which a relatively unspecialized cell, e.g. embryonic or regenerative cell, acquires specialized structural and/or functional features that characterize a specific cell. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. NMDCO_relaxed.owl UBERON:0000949 biolink:NamedThing endocrine system Anatomical system that consists of the glands and parts of glands that produce endocrine secretions and help to integrate and control bodily metabolic activity. NMDCO_relaxed.owl Na0ac7827ee274d12b483ee355e17ed69 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001199 biolink:NamedThing mucosa of stomach The mucosal layer that lines the stomach. NMDCO_relaxed.owl N6e03b758692545719a1542a1215e4b48 biolink:NamedThing NMDCO_relaxed.owl Nbe3110173bf1428f8c1a4898d14aa5ca biolink:NamedThing NMDCO_relaxed.owl PATO:0001360 biolink:NamedThing filamentous A shape quality inhering in a bearer by virtue of the bearer's having thin filamentous extensions at its edge. NMDCO_relaxed.owl Nd7dddf64687242f28818af71ae496216 biolink:NamedThing NMDCO_relaxed.owl Na36945f3e66b4546819d3d41feeff23f biolink:NamedThing NMDCO_relaxed.owl N4bd1aa0f23af4f27ae3fff28972687eb biolink:NamedThing NMDCO_relaxed.owl Nc996e2ea09b0410d9102740f171b4f99 biolink:NamedThing NMDCO_relaxed.owl N5b3db3da9b644b788767746dd8595fbf biolink:NamedThing NMDCO_relaxed.owl N35fa56c15f3f41228fc67f05c1d76e12 biolink:NamedThing NMDCO_relaxed.owl N5ba42d9ca25c4f939b1251a69518bb42 biolink:NamedThing NMDCO_relaxed.owl Nb0eb9fbf5abb455d967ff20fa800ca23 biolink:NamedThing NMDCO_relaxed.owl N1accbe6bd9f5471ca6e9444ea528184c biolink:NamedThing NMDCO_relaxed.owl Nafc15287f4524ab18969c9044ba54253 biolink:NamedThing NMDCO_relaxed.owl N1ffb54ac9e3844d7b1b0d3a5a363968e biolink:NamedThing NMDCO_relaxed.owl Ne95664bcef914bf09843b4ad5fdaca5b biolink:NamedThing NMDCO_relaxed.owl N6138948d88ba44a9b53850e8dbd02508 biolink:NamedThing NMDCO_relaxed.owl PATO:0002021 biolink:NamedThing conical A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a cone (a 3-D shape with a round cross section that tapers). NMDCO_relaxed.owl Ndfa2a1836d0146d9b3a0d87bc740e80c biolink:NamedThing NMDCO_relaxed.owl UBERON:8600004 biolink:NamedThing visceral muscle tissue A muscle tissue that is associated with soft internal organs (viscera). NMDCO_relaxed.owl UBERON:0001277 biolink:NamedThing intestinal epithelium Epithelial layer that lines the intestine. NMDCO_relaxed.owl UBERON:0000177 biolink:NamedThing pus Pus is a bodily fluid consisting of a whitish-yellow or yellow substance produced during inflammatory responses of the body that can be found in regions of pyogenic bacterial infections. Pus is produced from the dead and living cells which travel into the intercellular spaces around the affected cells. NMDCO_relaxed.owl N1fbd8017393e427e968766d823676a42 biolink:NamedThing NMDCO_relaxed.owl N18aaffaf8c0f4232b132e23c557412eb biolink:NamedThing NMDCO_relaxed.owl UBERON:0001090 biolink:NamedThing synovial fluid Joint fluid is a transudate of plasma that is actively secreted by synovial cells. NMDCO_relaxed.owl UBERON:0001068 biolink:NamedThing skin of back A zone of skin that is part of a back [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001158 biolink:NamedThing descending colon The portion of the colon between the left colic flexure and the sigmoid colon at the pelvic brim; the portion of the descending colon lying in the left iliac fossa is sometimes called the iliac colon. NMDCO_relaxed.owl PR:000002981 biolink:NamedThing lymphocyte antigen 76 (mouse) A protein that is a translation product of the Ly76 gene in mouse. NMDCO_relaxed.owl Nce0e14d3b4bf411f92b98ea469fd8c01 biolink:NamedThing NMDCO_relaxed.owl N3847db5f5fba4755b97b499771368345 biolink:NamedThing NMDCO_relaxed.owl PATO:0001405 biolink:NamedThing anucleate A nucleate quality inhering in a bearer by virtue of the bearer's having no nucleus. NMDCO_relaxed.owl Nc3e9b1f4f11746ccb35788516d96edc9 biolink:NamedThing NMDCO_relaxed.owl Nb0842bbacaa34f39afa040a0a47e2d13 biolink:NamedThing NMDCO_relaxed.owl N8819caf0227b4c10a7332cdc6023649c biolink:NamedThing NMDCO_relaxed.owl N31ecf4e4a64c473b87ff4d42e971bb92 biolink:NamedThing NMDCO_relaxed.owl N640e87e90253437db6e194bc0132f360 biolink:NamedThing NMDCO_relaxed.owl N55c7de17ef1b4d629d0b92419adee0cf biolink:NamedThing NMDCO_relaxed.owl N992ced624cc14d6fac7aab84228f4cfb biolink:NamedThing NMDCO_relaxed.owl N293c507ee40f42bbb10236b4053f6738 biolink:NamedThing NMDCO_relaxed.owl N3dd5432bf38c4d4caf12d71ea1816b0c biolink:NamedThing NMDCO_relaxed.owl N9a0995cd068a4f6b8bfd6b81b91cf518 biolink:NamedThing NMDCO_relaxed.owl N8d7f853f60574f8a8d6292dd8c83c0c2 biolink:NamedThing NMDCO_relaxed.owl N547d646833e2445587ea9e58330c23d7 biolink:NamedThing NMDCO_relaxed.owl Na47de41f948a458f98386f9d633f5cf3 biolink:NamedThing NMDCO_relaxed.owl N694f3093b90d48f9bf391ca420c0b59f biolink:NamedThing NMDCO_relaxed.owl N1593fd34c7b5417591ab341fde6702e1 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001607 biolink:NamedThing sphincter pupillae A sphincter muscle that is part of the iris. NMDCO_relaxed.owl IAO:0000101 biolink:NamedThing image An image is an affine projection to a two dimensional surface, of measurements of some quality of an entity or entities repeated at regular intervals across a spatial range, where the measurements are represented as color and luminosity on the projected on surface. NMDCO_relaxed.owl N26a2ccb62108435589c538d9f5764dac biolink:NamedThing NMDCO_relaxed.owl N900c633dcf484db3817bd5114c0f4e46 biolink:NamedThing NMDCO_relaxed.owl PATO:0015030 biolink:NamedThing plume-shaped A shape that ineres in a bearer by virtue of the bearer's mass being distributed in a feather-like fashion. NMDCO_relaxed.owl Nbba9d2412f0c4e689ff02fee877edae5 biolink:NamedThing NMDCO_relaxed.owl Nda4d920b307d45cfa192bc80a69431d4 biolink:NamedThing NMDCO_relaxed.owl GO:0032940 biolink:NamedThing secretion by cell The controlled release of a substance by a cell. NMDCO_relaxed.owl N5a19742089e647ff9bbeb6551ad285de biolink:NamedThing NMDCO_relaxed.owl UBERON:0002358 biolink:NamedThing peritoneum A serous membrane that lines the peritoneal cavity[VHOG,modified]. NMDCO_relaxed.owl Nb46a100a617949b1b9752ad0ca0d3b69 biolink:NamedThing NMDCO_relaxed.owl N591ce1fc7cd147738407f672bbaadfbb biolink:NamedThing NMDCO_relaxed.owl N6dd3bbcecf91427eb1f55660776b9e69 biolink:NamedThing NMDCO_relaxed.owl Nd8f06fe19ba8403ebbcd1beceeca5a2b biolink:NamedThing NMDCO_relaxed.owl Ncbe5ab0d8a3243d2a044012d91f2c8de biolink:NamedThing NMDCO_relaxed.owl Na4f14e070f2f4ee686cf90d9a2071bdc biolink:NamedThing NMDCO_relaxed.owl Nc16c9b1948ff449cb75c8d0c615efda0 biolink:NamedThing NMDCO_relaxed.owl N6e023ae9721f4a0d853f486747be44c1 biolink:NamedThing NMDCO_relaxed.owl N7cd5111ac4df4c9096113d26f4ba289a biolink:NamedThing NMDCO_relaxed.owl N8df8e5e1fb3b40448f94e6f8358be442 biolink:NamedThing NMDCO_relaxed.owl N8b95672d21764881a7b3bbbcbabf6d8c biolink:NamedThing NMDCO_relaxed.owl N6364da987e8d48a6a151b391c0852d55 biolink:NamedThing NMDCO_relaxed.owl Nfdd17679b39f4af5b53358c00b21f5c3 biolink:NamedThing NMDCO_relaxed.owl PATO:0000309 biolink:NamedThing young An age which is relatively low. NMDCO_relaxed.owl N2bd8291f4a764d6fb1a31fd27fe60e80 biolink:NamedThing NMDCO_relaxed.owl N1ebfb2ca0b2040c2bd61690ad878327c biolink:NamedThing NMDCO_relaxed.owl N6b99a16fe1b444828900423b0ead3475 biolink:NamedThing NMDCO_relaxed.owl Nb02d89d31ee04dad9a616b9d1a2e30fd biolink:NamedThing NMDCO_relaxed.owl Nbcad1fbb3a224ddbaa32d3a59374b223 biolink:NamedThing NMDCO_relaxed.owl Ndd6849b0d461429b99a953d57d65966c biolink:NamedThing NMDCO_relaxed.owl Ncb817d80ad3343f6b9505a08dcc64826 biolink:NamedThing NMDCO_relaxed.owl Nee518dae26c9414c9e0eae0bdf5c27f7 biolink:NamedThing NMDCO_relaxed.owl N54c1b028098e4fe69cfc4ab7ada3bbf3 biolink:NamedThing NMDCO_relaxed.owl N8c912324d5694a97849e63c951f9a233 biolink:NamedThing NMDCO_relaxed.owl N5915e8fc872148bc99edc1fd825e2907 biolink:NamedThing NMDCO_relaxed.owl N55f87f8902334cbc950b660d8b1e014e biolink:NamedThing NMDCO_relaxed.owl N923490f2c7b84b47b1c1d60c57714610 biolink:NamedThing NMDCO_relaxed.owl Nb8e48b52876e499caad540f6c6117cb6 biolink:NamedThing NMDCO_relaxed.owl N3a4876d2c10543de8190a539b295bcc0 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001052 biolink:NamedThing rectum The terminal portion of the intestinal tube, terminating with the anus. NMDCO_relaxed.owl N4c701c7bd7c74bc180314fd1620a8e9c biolink:NamedThing NMDCO_relaxed.owl N0a7dc105ecee4b8692756e0dfa565389 biolink:NamedThing NMDCO_relaxed.owl N3571240350214dd8b4912513c3e905d1 biolink:NamedThing NMDCO_relaxed.owl Ncc7b365ec4384a2e970614e428c90698 biolink:NamedThing NMDCO_relaxed.owl N4fc4a720b58646ad896d69ebaed40cf2 biolink:NamedThing NMDCO_relaxed.owl N8bf639dc1bd245c38cf3475607b7e43a biolink:NamedThing NMDCO_relaxed.owl Nddbf582c5ec54aa785a9be8e1d79d45b biolink:NamedThing NMDCO_relaxed.owl UBERON:0007100 biolink:NamedThing primary circulatory organ A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified]. NMDCO_relaxed.owl N9178d151948e471a98b21b6f461da982 biolink:NamedThing NMDCO_relaxed.owl Ne21464fefec44c48b043c44584c23d9b biolink:NamedThing NMDCO_relaxed.owl UBERON:0000165 biolink:NamedThing mouth The proximal portion of the digestive tract, containing the oral cavity and bounded by the oral opening. In vertebrates, this extends to the pharynx and includes gums, lips, tongue and parts of the palate. Typically also includes the teeth, except where these occur elsewhere (e.g. pharyngeal jaws) or protrude from the mouth (tusks). NMDCO_relaxed.owl N9cbb1f4eb54c408eaf19e81a345c65aa biolink:NamedThing NMDCO_relaxed.owl N469b34ba735e453a9baa8c1fe3598f15 biolink:NamedThing NMDCO_relaxed.owl PATO:0001375 biolink:NamedThing haploid A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of homologous chromosomes. NMDCO_relaxed.owl Naeffb9704c8f4a6c8c6294398840e330 biolink:NamedThing NMDCO_relaxed.owl UBERON:0000911 biolink:NamedThing chyle Chyle is a bodily fluid consisting of a milky fluid consisting of lymph and emulsified fats; formed in the small intestine during digestion of ingested fats. NMDCO_relaxed.owl Ne8c674ade5534dd2a4f3b27f6bc59be4 biolink:NamedThing NMDCO_relaxed.owl Nfa45f595b24e43fbba4e2e0a6062f85e biolink:NamedThing NMDCO_relaxed.owl Nf8a618d42e7f440c8f65233c5111bc95 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002049 biolink:NamedThing vasculature An interconnected tubular multi-tissue structure contains fluid that is actively transported around the organism[ZFA]. Examples: vasculature of lung, vasculature of face. NMDCO_relaxed.owl N9ef2656e3b4f4e3983d30981eea61864 biolink:NamedThing NMDCO_relaxed.owl Neaac5f49488f42908143bb4e2eaf6aaa biolink:NamedThing NMDCO_relaxed.owl Nc096bc53d1e642ed962dcfc72b087aee biolink:NamedThing NMDCO_relaxed.owl PATO:0001789 biolink:NamedThing domed A curvature quality inhering in a bearer by virtue of the bearer's having a shape resembling a dome. NMDCO_relaxed.owl Nc9c45e1ce0614242ad0e72c071fc739f biolink:NamedThing NMDCO_relaxed.owl Nb877f992924d4cb7b114810375c412e3 biolink:NamedThing NMDCO_relaxed.owl PR:000001444 biolink:NamedThing cadherin-5 A cadherin that is a translation product of the human CDH5 gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl N3794e5ecfa3e461383574e9519c45e9d biolink:NamedThing NMDCO_relaxed.owl UBERON:0002418 biolink:NamedThing cartilage tissue Skeletal tissue that is avascular, rich in glycosaminoglycans (GAGs) and typically includes chondrocytes within isolated lacunae. Cartilage tissue is deposited by chondroblasts. NMDCO_relaxed.owl N4d0dfd5086be4aa7b01751600beec053 biolink:NamedThing NMDCO_relaxed.owl GO:0009060 biolink:NamedThing aerobic respiration NMDCO_relaxed.owl N7b23035a0e894ecdb7df11c070a01202 biolink:NamedThing NMDCO_relaxed.owl UBERON:0000397 biolink:NamedThing colonic epithelium An epithelium that is part of a colon [Automatically generated definition]. NMDCO_relaxed.owl N072cc3a4f5014732947ff4a9ea0beb30 biolink:NamedThing NMDCO_relaxed.owl N32780cf82d4e497ab4b42f09ba7d8a8b biolink:NamedThing NMDCO_relaxed.owl N17c0237f2e374e84b166324031413eaa biolink:NamedThing NMDCO_relaxed.owl UBERON:0000358 biolink:NamedThing blastocyst The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm[GO]. NMDCO_relaxed.owl N7690226b9d684ef9a3b446fed78f434b biolink:NamedThing NMDCO_relaxed.owl N1796d83126184ad286cac8ab55ebaa60 biolink:NamedThing NMDCO_relaxed.owl Nff80850fc280407ca035f287a3a1dc96 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002085 biolink:NamedThing interatrial septum A cardiac septum that divides the left and right atria of the heart. NMDCO_relaxed.owl PATO:0001734 biolink:NamedThing semi-deciduous(plant) A quality inhering in a plant by virtue of the bearer's disposition to being between evergeen and deciduous. NMDCO_relaxed.owl N6251d443e6ff4d4c8a0356c93a94b6d5 biolink:NamedThing NMDCO_relaxed.owl Nacc15887ce9a4936a78ccd1231aeaa33 biolink:NamedThing NMDCO_relaxed.owl Nc49d5c6f83f04a71a912d8453bbf1c54 biolink:NamedThing NMDCO_relaxed.owl N310e3b9c28a54957b19a23bdb3564dc4 biolink:NamedThing NMDCO_relaxed.owl PATO:0002254 biolink:NamedThing flattened A quality inhering in a bearer by virtue of the bearer's surface becoming more extended in a plane. NMDCO_relaxed.owl N42d384093344469fa4bbd6527b154dcb biolink:NamedThing NMDCO_relaxed.owl GO:0008015 biolink:NamedThing blood circulation The flow of blood through the body of an animal, enabling the transport of nutrients to the tissues and the removal of waste products. NMDCO_relaxed.owl Ncab5d5251afa46b7a770970da849e30d biolink:NamedThing NMDCO_relaxed.owl N003c7a30119c4810a06087f3e7167440 biolink:NamedThing NMDCO_relaxed.owl Ndf340d95c4224af69ab95f5e887586ec biolink:NamedThing NMDCO_relaxed.owl Na45bf5a2f59244a5b21362ddfd46b40c biolink:NamedThing NMDCO_relaxed.owl Ncd2d6597748b4cc28fe07ce058a0a613 biolink:NamedThing NMDCO_relaxed.owl N83f4ccbd0dfc4d53ba622cd1d7cc0f7d biolink:NamedThing NMDCO_relaxed.owl N12003c73195245128e41919ae33b94ea biolink:NamedThing NMDCO_relaxed.owl Nb7a9aba605fb4536b7d6f366e17fa762 biolink:NamedThing NMDCO_relaxed.owl N16b4518a803d4f178238dd3bc47f4fb6 biolink:NamedThing NMDCO_relaxed.owl N1174a753e9d443afb383e70cb7410acf biolink:NamedThing NMDCO_relaxed.owl UBERON:0002384 biolink:NamedThing connective tissue Tissue with cells that deposit non-polarized extracellular matrix including connective tissue fibers and ground substance. NMDCO_relaxed.owl N007422ed41b44c2cafbc51102f44f76c biolink:NamedThing NMDCO_relaxed.owl PATO:0000689 biolink:NamedThing continuous A quality of a single process inhering in a bearer by virtue of the bearer's being uninterrupted in time, sequence, substance, or extent. NMDCO_relaxed.owl Neb854b6a2fee4fbbb5e03950aed432be biolink:NamedThing NMDCO_relaxed.owl N8dff1a45dd7f4857ae15fbc4bca57028 biolink:NamedThing NMDCO_relaxed.owl PATO:0001779 biolink:NamedThing decreased strength A strength which is relatively low. NMDCO_relaxed.owl N02d125db31c84d439816c5d6b4f7a59c biolink:NamedThing NMDCO_relaxed.owl Nc03824792cb94f50b9d7f0413cd816f1 biolink:NamedThing NMDCO_relaxed.owl N6774859730b4481eb3ef98ad7c6ef20d biolink:NamedThing NMDCO_relaxed.owl N0bf16533a1264545a96e0a9ab1767f66 biolink:NamedThing NMDCO_relaxed.owl Nb15597a0773d466ca15504018b61ad99 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001416 biolink:NamedThing skin of abdomen A zone of skin that is part of an abdomen [Automatically generated definition]. NMDCO_relaxed.owl Nc702c53e79c9487d8c02c2eaae967941 biolink:NamedThing NMDCO_relaxed.owl Ne8e7c313368e4b56a6395b080a13acbf biolink:NamedThing NMDCO_relaxed.owl N9d526fc03c064935b43c4a62906c7b0b biolink:NamedThing NMDCO_relaxed.owl N4910182e2f864602995e9ed87df5a537 biolink:NamedThing NMDCO_relaxed.owl N87394e41c04c43d7a924236ad3ba914d biolink:NamedThing NMDCO_relaxed.owl N3cda3cc4591e4beebcccd8f5a9c90c20 biolink:NamedThing NMDCO_relaxed.owl N7149022d07a047f7bcf152b3e9646a59 biolink:NamedThing NMDCO_relaxed.owl PATO:0002094 biolink:NamedThing basophilic An affinity inhering in an anatomical structure by virtue of the bearer exhibiting a molecular interaction for basic dyes under specific pH conditions. NMDCO_relaxed.owl N437a97518d7c44faa4499cd9cf43adbb biolink:NamedThing NMDCO_relaxed.owl Nbe717fcce78c4c7b8f75c456c8c73c40 biolink:NamedThing NMDCO_relaxed.owl N851fa48f96a74ca0888ac21131497a4a biolink:NamedThing NMDCO_relaxed.owl Nc41ab6dfacd84daeaa88e52bea9797fb biolink:NamedThing NMDCO_relaxed.owl PO:0025161 biolink:NamedThing portion of plant substance A portion of organism substance that is or was part of a plant. NMDCO_relaxed.owl PATO:0001332 biolink:NamedThing amorphous A morphology quality inhering in a bearer by virtue of the bearer's lack of distinct morphology. NMDCO_relaxed.owl UBERON:0005388 biolink:NamedThing photoreceptor array An array of photoreceptors and any supporting cells found in an eye. NMDCO_relaxed.owl NCBITaxon:131567 biolink:NamedThing cellular organisms NMDCO_relaxed.owl N9f0488f097f841348872da1123c9dd54 biolink:NamedThing NMDCO_relaxed.owl N7c488ccc092c4e26b7140c2da61dce6a biolink:NamedThing NMDCO_relaxed.owl Nf945e7db93884bc8bcfc11720e8a9960 biolink:NamedThing NMDCO_relaxed.owl PATO:0000407 biolink:NamedThing flat A quality inhering in a bearer by virtue of the bearer's having a horizontal surface without a slope, tilt, or curvature. NMDCO_relaxed.owl N34372021f67f42f0ba4dfcc55bea1990 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001281 biolink:NamedThing hepatic sinusoid Wide thin-walled blood vessels in the liver. In mammals they have neither veinous or arterial markers. NMDCO_relaxed.owl Ne5f4409fecbe47c8b94f6f17d9cb6718 biolink:NamedThing NMDCO_relaxed.owl NCBITaxon:142796 biolink:NamedThing Eumycetozoa NMDCO_relaxed.owl UBERON:0001637 biolink:NamedThing artery An epithelial tube or tree of tibes that transports blood away from the heart[modified from AEO definition]. NMDCO_relaxed.owl N8f3786d902d142788ed8ca41800876b0 biolink:NamedThing NMDCO_relaxed.owl N85081f806c234958a405ffdd5c25bab3 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002297 biolink:NamedThing cerumen The yellow or brown waxy secretions produced by vestigial apocrine sweat glands in the external ear canal[MESH]. NMDCO_relaxed.owl PCO:0000001 biolink:NamedThing population of organisms A collection of organisms, all of the same species, that live in the same place. NMDCO_relaxed.owl N538db85f0d51483d9f12a304c8efbc2d biolink:NamedThing NMDCO_relaxed.owl N5f8fc9fda8a3420fbb0fea904ee5f78b biolink:NamedThing NMDCO_relaxed.owl Nc2304a9261884929a53261c0a1d5232b biolink:NamedThing NMDCO_relaxed.owl Nb78e3c34ab4a4da88cdeaddabd0a9212 biolink:NamedThing NMDCO_relaxed.owl N005bad4f58744c058e4fb42cbf9b6ef3 biolink:NamedThing NMDCO_relaxed.owl N464f8d9240bb414e9735edcf05b0b03d biolink:NamedThing NMDCO_relaxed.owl N5288dcd73a0b47be953d4b673d50abfa biolink:NamedThing NMDCO_relaxed.owl Nfd2e22354fe6467189a3ef20c2c4efc2 biolink:NamedThing NMDCO_relaxed.owl N7b54a7a6788544d68e4b37ec1336e123 biolink:NamedThing NMDCO_relaxed.owl N25674242c3e74a2187a204a9d7c786c1 biolink:NamedThing NMDCO_relaxed.owl Nc0d1dc76990446d08479c4e4c9443c56 biolink:NamedThing NMDCO_relaxed.owl Nebae668432c04cefaa73ef62151bc409 biolink:NamedThing NMDCO_relaxed.owl N1c4a30842c2c4006aa2d12c3d92fecd1 biolink:NamedThing NMDCO_relaxed.owl Nb5f4c98b34394f9da742c86b0458060c biolink:NamedThing NMDCO_relaxed.owl Ne2dacff75d5a46308cbde87476260931 biolink:NamedThing NMDCO_relaxed.owl Nd419d836977a4a77b5ef00ccf6e7862c biolink:NamedThing NMDCO_relaxed.owl UBERON:0001529 biolink:NamedThing brachiocephalic artery The short first aortic arch branch and divides into the right subclavian artery and the right common carotid artery. NMDCO_relaxed.owl UBERON:0000173 biolink:NamedThing amniotic fluid Amniotic fluid is a bodily fluid consisting of watery liquid surrounding and cushioning a growing fetus within the amnion. It allows the fetus to move freely without the walls of the uterus being too tight against its body. Buoyancy is also provided. The composition of the fluid changes over the course of gestation. Initially, amniotic fluid is similar to maternal plasma, mainly water with electrolytes. As the fetus develops, proteins, carbohydrates, lipids, phospholipids originating from the lungs, fetal cells, and urea are deposited in the fluid. NMDCO_relaxed.owl Nc3b9ac3ceb9947e8b67baf2ca61f580c biolink:NamedThing NMDCO_relaxed.owl Ncdac2f44dee54fd9b759bf0e3371662e biolink:NamedThing NMDCO_relaxed.owl UBERON:0001366 biolink:NamedThing parietal peritoneum The outer layer of peritoneum that is attached to the abdominal and pelvic walls. NMDCO_relaxed.owl Naa34ecbf2a5944c88df858e99b69b10e biolink:NamedThing NMDCO_relaxed.owl N92c6b9d0f06147f1963a4fd029594f23 biolink:NamedThing NMDCO_relaxed.owl N0c27d3aa91a1441eb9a381add39b5ff9 biolink:NamedThing NMDCO_relaxed.owl N54b08859667e48a9b81e2651901d2d21 biolink:NamedThing NMDCO_relaxed.owl Nf7d4074546c54b318ed4a4efae636299 biolink:NamedThing NMDCO_relaxed.owl N2cd9f4fd79b247569fff9e329eaaaa6a biolink:NamedThing NMDCO_relaxed.owl N63763d42575e4f5086aad790fe8700ea biolink:NamedThing NMDCO_relaxed.owl UBERON:0000371 biolink:NamedThing syncytiotrophoblast Extraembryonic cells of trophoblastic shell surrounding embryo, outside the cytotrophoblast layer, involved with implantation of the blastocyst by eroding extracellular matrix surrounding maternal endometrial cells at site of implantation, also contribute to villi. (dark staining, multinucleated). NMDCO_relaxed.owl Nf5cb68f31a2a480a8504dcca00e31d07 biolink:NamedThing NMDCO_relaxed.owl Naaf7f58b4e5743c9a3f65332f9725c3f biolink:NamedThing NMDCO_relaxed.owl N9448a2741cb64b338b34d41d141dac38 biolink:NamedThing NMDCO_relaxed.owl N407ee708212e4160827075c2ed407623 biolink:NamedThing NMDCO_relaxed.owl N525a34f7158d472c86be1670efae03d9 biolink:NamedThing NMDCO_relaxed.owl N775c2bc989944e839c10bfe98727c4fc biolink:NamedThing NMDCO_relaxed.owl UBERON:0002217 biolink:NamedThing synovial joint Joint in which the articulating bones or cartilages are connected by an articular capsule which encloses a synovial membrane and a synovial cavity. Examples: Temporomandibular joint, knee joint.[FMA]. NMDCO_relaxed.owl N491bc041dd674d9fac72a87e593ac945 biolink:NamedThing NMDCO_relaxed.owl N1b34d9d8007d49cda0614f187db023df biolink:NamedThing NMDCO_relaxed.owl GO:0015948 biolink:NamedThing methanogenesis NMDCO_relaxed.owl UBERON:0007846 biolink:NamedThing dense regular connective tissue Connective tissue that is dominated by collagen fibres organized into a definitive pattern (e.g., parallel to one another), with comparatively fewer cells (mostly fibroblasts). NMDCO_relaxed.owl PATO:0001481 biolink:NamedThing sloped A shape quality inhering in a bearer by virtue of the bearer's having an oblique or slanted direction. NMDCO_relaxed.owl N8877abeac2c54684a64b1cef06b54c15 biolink:NamedThing NMDCO_relaxed.owl GO:0030263 biolink:NamedThing apoptotic chromosome condensation The compaction of chromatin during apoptosis. NMDCO_relaxed.owl N6e4cb6558141497eac10d9fea83d37aa biolink:NamedThing NMDCO_relaxed.owl N54978a7217044162808a8366e9d03644 biolink:NamedThing NMDCO_relaxed.owl N7a134409efe24b728a8b7421e2e188a7 biolink:NamedThing NMDCO_relaxed.owl N944198aba4764baaa42d4e17ca5768c7 biolink:NamedThing NMDCO_relaxed.owl N1a52fb3b992c40c2b981d25937bd8f74 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001064 biolink:NamedThing ventral pancreatic duct A duct joining the pancreas to the common bile duct to supply pancreatic juices which aid in digestion provided by the exocrine pancreas. The pancreatic duct joins the common bile duct just prior to the ampulla of Vater, after which both ducts perforate the medial side of the second portion of the duodenum at the major duodenal papilla. NMDCO_relaxed.owl N9be8d67536704443ad6fa5831166c378 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002298 biolink:NamedThing brainstem Stalk-like part of the brain that includes amongst its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,MP,generalized]. NMDCO_relaxed.owl PO:0009005 biolink:NamedThing root A plant axis (PO:0025004) that lacks shoot axis nodes (PO:0005004) and usually grows indeterminately. NMDCO_relaxed.owl N45bdcad928024016a5ccc6ccdb6cf3cb biolink:NamedThing NMDCO_relaxed.owl Nb4362212d6de44f78455010f2bbbd91b biolink:NamedThing NMDCO_relaxed.owl GO:0030072 biolink:NamedThing peptide hormone secretion The regulated release of a peptide hormone from a cell. NMDCO_relaxed.owl Nc7a1d5fc9df74770bc39ba9458b19438 biolink:NamedThing NMDCO_relaxed.owl Nfa2e7d1df8954954ba4fbcb352a3d800 biolink:NamedThing NMDCO_relaxed.owl UBERON:0000018 biolink:NamedThing compound eye A light sensing organ composed of ommatidia. NMDCO_relaxed.owl GO:0015671 biolink:NamedThing oxygen transport The directed movement of oxygen (O2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0016477 biolink:NamedThing cell migration The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues. NMDCO_relaxed.owl Ndf7aa5416e6849dd82c77c926ec62534 biolink:NamedThing NMDCO_relaxed.owl N27ef4ec091ff47089377a64d2ddeebb6 biolink:NamedThing NMDCO_relaxed.owl GO:0043226 biolink:NamedThing organelle Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane. NMDCO_relaxed.owl PATO:0001410 biolink:NamedThing striated A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel. NMDCO_relaxed.owl PR:000001869 biolink:NamedThing interleukin-7 receptor subunit alpha A protein that is a translation product of the human IL7R gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl GO:0030073 biolink:NamedThing insulin secretion The regulated release of proinsulin from secretory granules accompanied by cleavage of proinsulin to form mature insulin. In vertebrates, insulin is secreted from B granules in the B cells of the vertebrate pancreas and from insulin-producing cells in insects. NMDCO_relaxed.owl N96056fcce0e149fcb05d1d8d8a5cd05e biolink:NamedThing NMDCO_relaxed.owl GO:0035929 biolink:NamedThing steroid hormone secretion The regulated release of any steroid that acts as a hormone into the circulatory system. NMDCO_relaxed.owl PATO:0040072 biolink:NamedThing high nuclear/cytoplasmic ratio A quality inhering in a cell by virtue of the cell having a high nuclear/cytoplasmic ratio. NMDCO_relaxed.owl UBERON:0002391 biolink:NamedThing lymph Lymph is the fluid that is formed when interstitial fluid enters the conduits of the lymphatic system through lymph capillaries[WP]. NMDCO_relaxed.owl Nffe1f1bd3de74c10aa269814d38ba9c2 biolink:NamedThing NMDCO_relaxed.owl N6ec8e7082d174b728bf110f158b301dc biolink:NamedThing NMDCO_relaxed.owl N241b1db705754b0e93fd6d7dd031d82b biolink:NamedThing NMDCO_relaxed.owl N657d5b30e0894db0b612f948608d5827 biolink:NamedThing NMDCO_relaxed.owl Ndbe374fd861c4680a6c5e01c646eb752 biolink:NamedThing NMDCO_relaxed.owl N4938046c82d542a79956c2f334d0658a biolink:NamedThing NMDCO_relaxed.owl N977605464db148fcb93f05358525f250 biolink:NamedThing NMDCO_relaxed.owl Na8718230b47f4e0fb15e303c8268ced6 biolink:NamedThing NMDCO_relaxed.owl GO:0070253 biolink:NamedThing somatostatin secretion The regulated release of somatostatin from secretory granules in the D cells of the pancreas. NMDCO_relaxed.owl N0ef6b3a580474a1dbcab2471cbce6afe biolink:NamedThing NMDCO_relaxed.owl UBERON:0001159 biolink:NamedThing sigmoid colon The part of the large intestine that is closest to the rectum and anus. It forms a loop that averages about 40 cm. in length, and normally lies within the pelvis, but on account of its freedom of movement it is liable to be displaced into the abdominal cavity. NMDCO_relaxed.owl N762e7a21762e431db6a6fced0a6a27f7 biolink:NamedThing NMDCO_relaxed.owl N016d544e3cb846c3bac303584772dc3a biolink:NamedThing NMDCO_relaxed.owl GO:0015630 biolink:NamedThing microtubule cytoskeleton The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins. NMDCO_relaxed.owl N0a56cd7abe5741279a5cd33a0fc46a78 biolink:NamedThing NMDCO_relaxed.owl N30d8034976664d8b81c9971fa74bd298 biolink:NamedThing NMDCO_relaxed.owl GO:0045333 biolink:NamedThing cellular respiration NMDCO_relaxed.owl N44d647d3a8ee4c398fb016dc85c5f5ec biolink:NamedThing NMDCO_relaxed.owl N91c97d9ffd94472d8e85601a082952e2 biolink:NamedThing NMDCO_relaxed.owl Ne0310ae324ca48c69202a119784dbb6b biolink:NamedThing NMDCO_relaxed.owl N1a88c8e409ec46c59bbcecea1d3956b7 biolink:NamedThing NMDCO_relaxed.owl Nd141f28408b845e1950565cd430cfe0a biolink:NamedThing NMDCO_relaxed.owl Nd474a14baea8490c96c80fc86c2ce9ab biolink:NamedThing NMDCO_relaxed.owl UBERON:0000174 biolink:NamedThing excreta A portion of organism substance that is the product of an excretion process that will be eliminated from the body. An excretion process is elimination by an organism of the waste products that arise as a result of metabolic activity. NMDCO_relaxed.owl Ncbd8b31394164fe0b1e3310b3db30bdd biolink:NamedThing NMDCO_relaxed.owl N2a1b4e1a263b47fc966256798eaf0933 biolink:NamedThing NMDCO_relaxed.owl Ndf97d6583ddf4644951b67bf50cb78df biolink:NamedThing NMDCO_relaxed.owl N703a4fc90c2c489b9121493419f07ef1 biolink:NamedThing NMDCO_relaxed.owl Nebd6293710ab41739292cbeac8553049 biolink:NamedThing NMDCO_relaxed.owl Na97f9dc79d8941f6a96155c643aaf0f1 biolink:NamedThing NMDCO_relaxed.owl UBERON:0006841 biolink:NamedThing central vein of liver Vein that is central to a lobule in the liver. NMDCO_relaxed.owl Nb25b9fada3884ed9a1182956010cffcb biolink:NamedThing NMDCO_relaxed.owl N49f038837142428991ff2acb18d2fd5f biolink:NamedThing NMDCO_relaxed.owl Ncb07397e4aeb479d8fd889ce5b5e40f6 biolink:NamedThing NMDCO_relaxed.owl N283c95c3b2d649b3a35e3811f9992a9d biolink:NamedThing NMDCO_relaxed.owl N56ac44d0a8d540b08ac1f4c7a786c593 biolink:NamedThing NMDCO_relaxed.owl N1d47e795a4f04bfea09412b4bb92abec biolink:NamedThing NMDCO_relaxed.owl PATO:0000411 biolink:NamedThing circular A shape quality inhering in a bearer by virtue of the bearer's being such that every part of the surface or the circumference is equidistant from the center. NMDCO_relaxed.owl N674031c9143c404ab9e1a9a1f9feda91 biolink:NamedThing NMDCO_relaxed.owl N39aa8dd7e7da437e90539e6fc83aa2fb biolink:NamedThing NMDCO_relaxed.owl N686a6344e307463ebd69241977a6d488 biolink:NamedThing NMDCO_relaxed.owl Nafb4db0ee6874dc9be3acd1fefe1a8ab biolink:NamedThing NMDCO_relaxed.owl N1754d2fc4b7c4f13894d9bd6804a2740 biolink:NamedThing NMDCO_relaxed.owl N4f1b6628584e4ae586ba11cf0ff46207 biolink:NamedThing NMDCO_relaxed.owl Nd2e4e0d88e374ac6b8c5ba41bfae503c biolink:NamedThing NMDCO_relaxed.owl PATO:0002352 biolink:NamedThing herbaceous A quality inhering in a bearer by virtue of the bearer's upper parts die back to the rootstock at the end of the growing season. NMDCO_relaxed.owl N6f5c941182ca4107a0e778d680c35f9f biolink:NamedThing NMDCO_relaxed.owl Nffcb705cd44442a6a00d2f716da976e0 biolink:NamedThing NMDCO_relaxed.owl Nb63e106b84dd4f2a81226b2f039501dc biolink:NamedThing NMDCO_relaxed.owl N93c03d5afc494e6b9dc2c72a81859d5b biolink:NamedThing NMDCO_relaxed.owl Nb7a1c8a27fb64069af2d3d2e3c01a57c biolink:NamedThing NMDCO_relaxed.owl Nb46a9332f02a42cbafdf40cd9be41fd3 biolink:NamedThing NMDCO_relaxed.owl Nfa38ce50edfa4d598c15c2a9e2254f0a biolink:NamedThing NMDCO_relaxed.owl N3c9e9127554d419fb3b3a3c2bf6ba8d6 biolink:NamedThing NMDCO_relaxed.owl PATO:0001401 biolink:NamedThing oligopotent A cellular potency that is the capacity to form multiple differentiated cell types of a specific lineage and lack self renewing capacity. NMDCO_relaxed.owl N340c6a90c6744e2b92b66d5eeb1ab6de biolink:NamedThing NMDCO_relaxed.owl N978e92643f3b4c3d84247c025f0811fe biolink:NamedThing NMDCO_relaxed.owl UBERON:0000913 biolink:NamedThing interstitial fluid Interstitial fluid is a bodily fluid consisting of a solution which bathes and surrounds the cells of multicellular animals. It is the main component of the extracellular fluid, which also includes plasma and transcellular fluid. NMDCO_relaxed.owl PATO:0001548 biolink:NamedThing quality of a liquid A physical quality inhering in an entity exhibiting the physical characteristics of an amorphous (non-crystalline) form of matter between a gas and a solid that has a definite volume, but no definite shape. NMDCO_relaxed.owl N169701839f6c45ca84c0174d9530e07e biolink:NamedThing NMDCO_relaxed.owl UBERON:0004590 biolink:NamedThing sphincter muscle A structure, usually a circular muscle, that normally maintains constriction of a natural body passage or orifice and which relaxes as required by normal physiological functioning. NMDCO_relaxed.owl N75b80e2ff92f4cc2921f134642568f9a biolink:NamedThing NMDCO_relaxed.owl Nd09d1c9d08004bae93851f2d80bdc62e biolink:NamedThing NMDCO_relaxed.owl Ndaa1aaa44ed7419ba5f64d1ddc9eee8d biolink:NamedThing NMDCO_relaxed.owl Na7d2293165af481dbec1e5246d4edfbc biolink:NamedThing NMDCO_relaxed.owl N387a7f8868274dccafbb57a20d814d0c biolink:NamedThing NMDCO_relaxed.owl N392f04afd45c471fb762002d8131a014 biolink:NamedThing NMDCO_relaxed.owl N6ce6efb8db4a4064ba9f610aecf7f931 biolink:NamedThing NMDCO_relaxed.owl N02df8538cdaa47b28e8824dcb5bf5371 biolink:NamedThing NMDCO_relaxed.owl N87cee57b47414a3b9244bcdd3ea1d175 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002080 biolink:NamedThing heart right ventricle A cardiac ventricle that is in the right side of the heart. NMDCO_relaxed.owl Nf9ac5d4ebc2d4f68ae2daaee140d30bd biolink:NamedThing NMDCO_relaxed.owl N0199a1ae64f24daebf16bd1930ea7e13 biolink:NamedThing NMDCO_relaxed.owl Nb2138f5d15874a2987acf322744a7bb6 biolink:NamedThing NMDCO_relaxed.owl N0474040bde144eeba085009688e4a544 biolink:NamedThing NMDCO_relaxed.owl N4a957c25af704d1899403cfe2ba91bce biolink:NamedThing NMDCO_relaxed.owl Ne6b486293b14415f9dea674e8cc043d5 biolink:NamedThing NMDCO_relaxed.owl Ne0001bcc8820412784e6068b5e39f1a3 biolink:NamedThing NMDCO_relaxed.owl Na0b61e83c1844678be01d545c7ce0297 biolink:NamedThing NMDCO_relaxed.owl GO:0019226 biolink:NamedThing transmission of nerve impulse The neurological system process in which a signal is transmitted through the nervous system by a combination of action potential propagation and synaptic transmission. NMDCO_relaxed.owl Nf38d20e4fb154457a3d4fb94fde549c9 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002082 biolink:NamedThing cardiac ventricle Cardiac chamber through which blood leaves the heart. NMDCO_relaxed.owl N848855fdf7e04912be0d5c1d8ab87661 biolink:NamedThing NMDCO_relaxed.owl Nc0d062aaf437430381e368dc4fc55d8b biolink:NamedThing NMDCO_relaxed.owl UBERON:0001976 biolink:NamedThing epithelium of esophagus The epithelial layer that lines the luminal space of the esophagus. NMDCO_relaxed.owl GO:0070483 biolink:NamedThing detection of hypoxia The series of events in which a stimulus indicating lowered oxygen tension is received by a cell and converted into a molecular signal. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. NMDCO_relaxed.owl N02aa119932134a338d2de92b8172da8e biolink:NamedThing NMDCO_relaxed.owl UBERON:0002165 biolink:NamedThing endocardium The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers[GO]. NMDCO_relaxed.owl Nf096bd0842c243199a5c1e122b71d229 biolink:NamedThing NMDCO_relaxed.owl Nf901876db46f4a6187242a726e665816 biolink:NamedThing NMDCO_relaxed.owl N9b8f4859e42d4bf6b10cff3e33a7465c biolink:NamedThing NMDCO_relaxed.owl UBERON:0002029 biolink:NamedThing epithelium of gall bladder The simple columnar epithelial lining of the gall bladder. NMDCO_relaxed.owl N87d6c5dd339444eead03c6f9f34c8932 biolink:NamedThing NMDCO_relaxed.owl Nf02aed77d1f54a7783172fd4dadfe9dd biolink:NamedThing NMDCO_relaxed.owl GO:0044237 biolink:NamedThing cellular metabolic process The chemical reactions and pathways by which individual cells transform chemical substances. NMDCO_relaxed.owl N7353d27b54f24adf901b589333243363 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001016 biolink:NamedThing nervous system The nervous system is an organ system containing predominantly neuron and glial cells. In bilaterally symmetrical organism, it is arranged in a network of tree-like structures connected to a central body. The main functions of the nervous system are to regulate and control body functions, and to receive sensory input, process this information, and generate behavior [CUMBO]. NMDCO_relaxed.owl N8fc4554a2c164eb3ba0de99844e1358a biolink:NamedThing NMDCO_relaxed.owl UBERON:0001866 biolink:NamedThing sebum Fatty lubricant matter secreted by sebaceous glands, and made of made of triglyceride oils, wax, squalene, and metabolytes of fat-producing cells[BTO,WP]. NMDCO_relaxed.owl GO:0031981 biolink:NamedThing nuclear lumen The volume enclosed by the nuclear inner membrane. NMDCO_relaxed.owl N5a80f788939042cc8af8699a021770da biolink:NamedThing NMDCO_relaxed.owl N350abb58922542c1b847d1617daf3699 biolink:NamedThing NMDCO_relaxed.owl N54645dadad6c48eb9e304184d29bc96b biolink:NamedThing NMDCO_relaxed.owl Na3ff270fc11546259bc01f26c9b1cbc9 biolink:NamedThing NMDCO_relaxed.owl GO:0009584 biolink:NamedThing detection of visible light The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm. NMDCO_relaxed.owl UBERON:0001630 biolink:NamedThing muscle organ Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO]. NMDCO_relaxed.owl N1aa56d90f9124e6f94e859c465902b94 biolink:NamedThing NMDCO_relaxed.owl N7058473b7e8e451ea5ae1515ba3416aa biolink:NamedThing NMDCO_relaxed.owl N01781a52d64d439f96f648b5009bcf83 biolink:NamedThing NMDCO_relaxed.owl PATO:0015022 biolink:NamedThing increased combustibility An increase in combustibility. NMDCO_relaxed.owl N9c48ae98c820414b99c67b3133059db3 biolink:NamedThing NMDCO_relaxed.owl N0939a2f414b5404c8f2634c5f962da10 biolink:NamedThing NMDCO_relaxed.owl N8d81e1a7250747dfa0b8aaf632b4669b biolink:NamedThing NMDCO_relaxed.owl Nbc3c4bb536a9499c8ee2882399c00537 biolink:NamedThing NMDCO_relaxed.owl Ndeba1193575c445e8a51c42e7c35e37f biolink:NamedThing NMDCO_relaxed.owl PR:000001003 biolink:NamedThing CD34 molecule A protein that is a translation product of the human CD34 gene or a 1:1 ortholog thereof. It is a leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. It contains a single-pass transmembrane domain and that show distinct expression on early hematopoietic precursors and vascular-associated tissue. Acts as a scaffold that presents selectin carbohydrate ligands in a clustered, tissue specific manner to allow for higher avidity interactions between leukocytes and endothelial cells during the inflammatory process. In common with related sialomucins (endoglycan and podocalyxin), the extracellular region is dominated by an N-terminal mucin-like domain, which is densely substituted with sialylated O-linked carbohydrates. The mucin-like region is followed by a cysteine-containing and presumably globular domain. This domain may fold into an immunoglobulin-like structure as the positions of 2 of the cysteines are conserved in the C2 set of the immunoglobulin superfamily. The cytoplasmic domain is around 73-76 residues long and highly conserved. NMDCO_relaxed.owl N0d5131aa2fa04f05a7d156e94c2a8413 biolink:NamedThing NMDCO_relaxed.owl PATO:0001854 biolink:NamedThing vertical A spatial pattern inhering in a bearer by virtue of the bearer's being situated at right angles to the horizon. NMDCO_relaxed.owl GO:0005773 biolink:NamedThing vacuole A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol. NMDCO_relaxed.owl N14a49736ab2545e2afedfb23a0122459 biolink:NamedThing NMDCO_relaxed.owl N49955fa7a751455c8930106704d7f47a biolink:NamedThing NMDCO_relaxed.owl N47cda3626bcd47b08901d4771fcbddd8 biolink:NamedThing NMDCO_relaxed.owl PCO:1000004 biolink:NamedThing microbial community An ecological community which is composed of co-existing populations of microbial organisms that interact, directly or indirectly, such that they impact one another's ecological fitness. NMDCO_relaxed.owl GO:0048243 biolink:NamedThing norepinephrine secretion The regulated release of norepinephrine by a cell. Norepinephrine is a catecholamine and it acts as a hormone and as a neurotransmitter of most of the sympathetic nervous system. NMDCO_relaxed.owl Nf1a2af7c2e9d448793321fd92bfa5bb4 biolink:NamedThing NMDCO_relaxed.owl Nd7f40f3816f141f29c3f60a2d1060b20 biolink:NamedThing NMDCO_relaxed.owl Ncdbf1fe97a4748358306dd10e135b203 biolink:NamedThing NMDCO_relaxed.owl N2d17fb67c54443b8b46aca55470b7e52 biolink:NamedThing NMDCO_relaxed.owl UBERON:0004146 biolink:NamedThing His-Purkinje system The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles. NMDCO_relaxed.owl N50f73223bb94452493eb2c9dbe1293f0 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001178 biolink:NamedThing visceral peritoneum The inner layer of peritoneum that is wrapped around organs located inside the intraperitoneal space. NMDCO_relaxed.owl N40765119f0384dfa815676d3a221809e biolink:NamedThing NMDCO_relaxed.owl Nc7e1410b52004971aa97b2f704bfb657 biolink:NamedThing NMDCO_relaxed.owl Nd34d1a05f45948c9be9bb2e3e8051137 biolink:NamedThing NMDCO_relaxed.owl Nef25836ea35945dc9f19a4c1073d09e2 biolink:NamedThing NMDCO_relaxed.owl N00ea5c987bad460493d520b6a90d24a4 biolink:NamedThing NMDCO_relaxed.owl N6db40ca06e2a40c8844a25cfa651eda7 biolink:NamedThing NMDCO_relaxed.owl N4e354173ce294cbd8bdb8d2e915f7c52 biolink:NamedThing NMDCO_relaxed.owl N737127e44ce147cc8ee435906e281ec4 biolink:NamedThing NMDCO_relaxed.owl N17fee91b2d5443a9b51519d68a42bb13 biolink:NamedThing NMDCO_relaxed.owl Na55ee3c3826645d0b0854c8378a12f3f biolink:NamedThing NMDCO_relaxed.owl GO:0007601 biolink:NamedThing visual perception The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image. NMDCO_relaxed.owl Nb3c309d45f0248798bf17c94886ccc01 biolink:NamedThing NMDCO_relaxed.owl N01d93bb03d3546429bf74be23e725687 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002405 biolink:NamedThing immune system Anatomical system that protects the body from foreign substances, cells, and tissues by producing the immune response and that includes especially the thymus, spleen, lymphoid tissue, lymphocytes including the B cells and T cells, and antibodies. NMDCO_relaxed.owl Na9f2a31e9d1e4eed895e508cb89a8faa biolink:NamedThing NMDCO_relaxed.owl Nd32ce6b57e394229982ad7b293e7c488 biolink:NamedThing NMDCO_relaxed.owl Na31c42f2ade6410491421cbc99f25636 biolink:NamedThing NMDCO_relaxed.owl Nb4366e3e1d144b20a1f957d0bbc737e5 biolink:NamedThing NMDCO_relaxed.owl Nfba7edd29b8a4a4f96fcc2d7dd8f61d6 biolink:NamedThing NMDCO_relaxed.owl N1462c6c028e74861abaf5dcb5c07655b biolink:NamedThing NMDCO_relaxed.owl N816bf0212167474d8a3e05e50b5eb8c6 biolink:NamedThing NMDCO_relaxed.owl Nf336f55056144fdea0cf8979e2b83a43 biolink:NamedThing NMDCO_relaxed.owl N571b8268060f4cfaae77e63b4bba22d3 biolink:NamedThing NMDCO_relaxed.owl N81802109abf94251ad62cfe4035a8700 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001836 biolink:NamedThing saliva A fluid produced in the oral cavity by salivary glands, typically used in predigestion, but also in other functions. NMDCO_relaxed.owl Na15d03325e7b404a9eeca71086e97142 biolink:NamedThing NMDCO_relaxed.owl N723adbf01e0d47e282c72dbce127a7f0 biolink:NamedThing NMDCO_relaxed.owl Ne9ab50c0e9bd49ed922be642cc31de5c biolink:NamedThing NMDCO_relaxed.owl PATO:0001885 biolink:NamedThing hydrophobic A quality inhering in a bearer by virtue of the bearer's lacking affinity for water; tending to repel and not absorb water; tending not to dissolve in or mix with or be wetted by water. NMDCO_relaxed.owl Nde10727cc95f4789968d31f07754d083 biolink:NamedThing NMDCO_relaxed.owl Nd3318a752c5448e9be143307cf3bf79c biolink:NamedThing NMDCO_relaxed.owl N110e521982aa4fdfba9ef4447d5b24ad biolink:NamedThing NMDCO_relaxed.owl N31f62528a23f48829390e5cfdc5e6564 biolink:NamedThing NMDCO_relaxed.owl N2da2936b36eb41d88dfdd83f49758dd3 biolink:NamedThing NMDCO_relaxed.owl N71d205969331411d8c26e31b645fec7c biolink:NamedThing NMDCO_relaxed.owl UBERON:0001242 biolink:NamedThing intestinal mucosa Mucosal layer that lines the intestine. NMDCO_relaxed.owl N5299d53a210041debe81c66f6793115b biolink:NamedThing NMDCO_relaxed.owl GO:0048477 biolink:NamedThing oogenesis The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster. NMDCO_relaxed.owl N694befa2f7bd45d8a363a2b6415649aa biolink:NamedThing NMDCO_relaxed.owl N8e3ae1a31f024e88831bea6d666e3d59 biolink:NamedThing NMDCO_relaxed.owl N9d74ac7fafb94ed38d8e5c3472a12a37 biolink:NamedThing NMDCO_relaxed.owl PATO:0001547 biolink:NamedThing quality of a gas A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity consisting of particles that have neither a defined volume nor defined shape. NMDCO_relaxed.owl N89a54fd5146840b1a44d590f53f4f9e7 biolink:NamedThing NMDCO_relaxed.owl Nfaa7a1be01974814a9ceec44067615f9 biolink:NamedThing NMDCO_relaxed.owl N9703cfce380c43779c8be5257db7c50b biolink:NamedThing NMDCO_relaxed.owl PR:000016043 biolink:NamedThing T-cell acute lymphocytic leukemia protein 1 A protein that is a translation product of the human TAL1 gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl UBERON:0006815 biolink:NamedThing areolar connective tissue Loose connective tissue located at the outer and inner layers of organs. Examples: submucosal connective tissue, tunica adventitia of artery, papillary dermis, superficial fascia of dorsum of hand. NMDCO_relaxed.owl N690b3cd493ff46b99109fb66b9b6a405 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001803 biolink:NamedThing epithelium of lens A layer of epithelial cells that is part of the eye. NMDCO_relaxed.owl Ne631def29596410b99ad261c689f9120 biolink:NamedThing NMDCO_relaxed.owl Na11c8c243fe549e8b7cdb60155d10e03 biolink:NamedThing NMDCO_relaxed.owl N8974d2260ab54589903791314ab0d90d biolink:NamedThing NMDCO_relaxed.owl UBERON:0000176 biolink:NamedThing oronasal secretion A bodily fluid secreted from the body via the mouth or nose. NMDCO_relaxed.owl N2b556aa3ec2a43fba100d54d6493796f biolink:NamedThing NMDCO_relaxed.owl N9aa1f3550088425a9355e91ddd1f1a03 biolink:NamedThing NMDCO_relaxed.owl GO:0060096 biolink:NamedThing serotonin secretion, neurotransmission The regulated release of serotonin by a cell, in which released serotonin acts as a neurotransmitter. NMDCO_relaxed.owl N3d9734b506e64fc6aeb5c66c0486fcd4 biolink:NamedThing NMDCO_relaxed.owl N823edf521f454084993544afb7fd350e biolink:NamedThing NMDCO_relaxed.owl UBERON:0005742 biolink:NamedThing adventitia An outermost connective tissue covering of an organ, vessel, or other structure[WP]. NMDCO_relaxed.owl UBERON:0000924 biolink:NamedThing ectoderm Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue. NMDCO_relaxed.owl Nae414c22f6274b57ae3ebfb4dbb7d17f biolink:NamedThing NMDCO_relaxed.owl PATO:0000983 biolink:NamedThing impermeable A permeability quality inhering in a bearer by virtue of the bearer's being incapable of being permeated or pervaded by a gas or liquid (as by osmosis or diffusion). NMDCO_relaxed.owl PATO:0000308 biolink:NamedThing old An age which is relatively high. NMDCO_relaxed.owl N3a9f7cbd125b46c0a1f24cd2e9a31181 biolink:NamedThing NMDCO_relaxed.owl N30693b033089437c9951cad19f17fdfa biolink:NamedThing NMDCO_relaxed.owl UBERON:0016405 biolink:NamedThing pulmonary capillary A capillary that is part of a lung. NMDCO_relaxed.owl Ne2de81e85ba249dc961c031540ff12e9 biolink:NamedThing NMDCO_relaxed.owl N4ee87414e32e4ecea57a741c76c3215c biolink:NamedThing NMDCO_relaxed.owl GO:0060047 biolink:NamedThing heart contraction The multicellular organismal process in which the heart decreases in volume in a characteristic way to propel blood through the body. NMDCO_relaxed.owl N3f6d9aef01a34e9086774a20a02a4606 biolink:NamedThing NMDCO_relaxed.owl N22c3229644e2448b8183d1a897c422a1 biolink:NamedThing NMDCO_relaxed.owl N46a89b080c344a8aae4d3c3cf2872ab2 biolink:NamedThing NMDCO_relaxed.owl Nffe9d834f664438f8b218ee51b00f1d1 biolink:NamedThing NMDCO_relaxed.owl Nb847a432ffee43f2ac4456558c355b37 biolink:NamedThing NMDCO_relaxed.owl N6111d98c54f24a5884cc27440a33d1a3 biolink:NamedThing NMDCO_relaxed.owl Nfce6f3bd65ae47ac83d087c09679e158 biolink:NamedThing NMDCO_relaxed.owl Ned23ff1f1713422db7880be2b59bb1ab biolink:NamedThing NMDCO_relaxed.owl N121c19cdbcf64b00b6c01b85c2ead540 biolink:NamedThing NMDCO_relaxed.owl N4871e0a1804746da880d9b43cd099f16 biolink:NamedThing NMDCO_relaxed.owl N932c866eeccb4439892567e91f3653db biolink:NamedThing NMDCO_relaxed.owl N8b43c860715e48528b8c84b762407fdd biolink:NamedThing NMDCO_relaxed.owl UBERON:0001156 biolink:NamedThing ascending colon Section of colon which is distal to the cecum and proximal to the transversecolon.[FMA,modified]. NMDCO_relaxed.owl PATO:0001741 biolink:NamedThing radioactive A radiation quality inhering in bearer by virtue of the bearer's exhibiting or being caused by radioactivity. NMDCO_relaxed.owl N110ce4a1ad22477e81b9cfd9befc1cfa biolink:NamedThing NMDCO_relaxed.owl N449a5ef964d740f7981e10c6a78ad7f3 biolink:NamedThing NMDCO_relaxed.owl N8209b1af8aea431b93776c114d67e3ac biolink:NamedThing NMDCO_relaxed.owl N43439f3afc2c4d67a85f972975220913 biolink:NamedThing NMDCO_relaxed.owl N460995559bad4c52903ac32b0be1938e biolink:NamedThing NMDCO_relaxed.owl UBERON:0003909 biolink:NamedThing sinusoid Small blood vessel similar to a capillary but with a fenestrated endothelium. Sinusoids are found in the liver, lymphoid tissue, endocrine organs, and hematopoietic organs such as the bone marrow and the spleen. Sinusoids found within terminal villi of the placenta are not comparable to these; they possess a continuous endothelium and complete basal lamina[WP]. NMDCO_relaxed.owl GO:0050962 biolink:NamedThing detection of light stimulus involved in sensory perception The series of events in which a light stimulus is received by a cell and converted into a molecular signal as part of the sensory perception of light. NMDCO_relaxed.owl N3a7491dfab7f44e0a67403579efbd368 biolink:NamedThing NMDCO_relaxed.owl UBERON:0003942 biolink:NamedThing somatosensory system The sensory system for the sense of touch and pain. NMDCO_relaxed.owl N821b7477f132441fa45f7483f9ca59a0 biolink:NamedThing NMDCO_relaxed.owl UBERON:0015474 biolink:NamedThing axilla skin A zone of skin that is part of a axilla. NMDCO_relaxed.owl UBERON:0004178 biolink:NamedThing aorta smooth muscle tissue The nonstriated, involuntary muscle tissue located in the wall of the aorta. NMDCO_relaxed.owl Na3963b73039c4bb1af3066701c8b04ac biolink:NamedThing NMDCO_relaxed.owl Ne8133db91a7c4b40ae27340d38373581 biolink:NamedThing NMDCO_relaxed.owl N968f2841d887480f8230055c148b7026 biolink:NamedThing NMDCO_relaxed.owl PATO:0001444 biolink:NamedThing broken A structural quality inhering in a bearer by virtue of the bearer's components no longer being in a single contiguous unit. NMDCO_relaxed.owl UBERON:0001133 biolink:NamedThing cardiac muscle tissue Muscle tissue composed of cardiac muscle cells, forming the muscles of the heart[ZFA,modified]. NMDCO_relaxed.owl N75bb8ba0de9b405c962788265b2a474f biolink:NamedThing NMDCO_relaxed.owl N2ad493e7db844fe892b3d59871d0519d biolink:NamedThing NMDCO_relaxed.owl Nad732945fdd344278bb7e3013d81383d biolink:NamedThing NMDCO_relaxed.owl N3a8b0024937247b681bd8d03df422e07 biolink:NamedThing NMDCO_relaxed.owl Nc330d36b5d4b4d60b631dbbdca5dc1dc biolink:NamedThing NMDCO_relaxed.owl N2b0e403943ee4e0fa9e5b686e783752c biolink:NamedThing NMDCO_relaxed.owl UBERON:0000087 biolink:NamedThing inner cell mass A mass of cells that develop into the body of the embryo and some extraembryonic tissues. NMDCO_relaxed.owl UBERON:0008998 biolink:NamedThing vasculature of brain System pertaining to blood vessels in the brain. NMDCO_relaxed.owl Nae86c2cd75cb4b14bfca38b87615fcc9 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002412 biolink:NamedThing vertebra The ossified form of a vertebral element, a skeletal element that forms around the notochord and is part of the vertebral column. NMDCO_relaxed.owl N9aa5df2aa6494dfb847646e533e27107 biolink:NamedThing NMDCO_relaxed.owl N1633504251a240759904723320afce4f biolink:NamedThing NMDCO_relaxed.owl PATO:0001377 biolink:NamedThing polyploid A ploidy quality inhering in a bearer by virtue of the bearer's containing more than two homologous sets of chromosomes. NMDCO_relaxed.owl GO:0030099 biolink:NamedThing myeloid cell differentiation The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages. NMDCO_relaxed.owl Nf78e3c31e5c54daf914e71260c259711 biolink:NamedThing NMDCO_relaxed.owl N4192f8e7416947f0901350613f4b3b2b biolink:NamedThing NMDCO_relaxed.owl Ne08806bb052f4b3db6ab353bbcef1a22 biolink:NamedThing NMDCO_relaxed.owl UBERON:0000925 biolink:NamedThing endoderm Primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut. NMDCO_relaxed.owl Nebb33d6de9754817b7969d7df5740eb5 biolink:NamedThing NMDCO_relaxed.owl Nc7d705e70af548ec85d2c285c0fc97ee biolink:NamedThing NMDCO_relaxed.owl Nd379d62b1e714185bf6371edca26a621 biolink:NamedThing NMDCO_relaxed.owl GO:1904705 biolink:NamedThing regulation of vascular associated smooth muscle cell proliferation Any process that modulates the frequency, rate or extent of vascular smooth muscle cell proliferation. NMDCO_relaxed.owl GO:1904706 biolink:NamedThing negative regulation of vascular associated smooth muscle cell proliferation Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell proliferation. NMDCO_relaxed.owl GO:1904707 biolink:NamedThing positive regulation of vascular associated smooth muscle cell proliferation Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell proliferation. NMDCO_relaxed.owl GO:1904746 biolink:NamedThing negative regulation of apoptotic process involved in development Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in development. NMDCO_relaxed.owl GO:1904747 biolink:NamedThing positive regulation of apoptotic process involved in development Any process that activates or increases the frequency, rate or extent of apoptotic process involved in development. NMDCO_relaxed.owl GO:1904748 biolink:NamedThing regulation of apoptotic process involved in development Any process that modulates the frequency, rate or extent of apoptotic process involved in development. NMDCO_relaxed.owl GO:1904749 biolink:NamedThing regulation of protein localization to nucleolus Any process that modulates the frequency, rate or extent of protein localization to nucleolus. NMDCO_relaxed.owl GO:1904750 biolink:NamedThing negative regulation of protein localization to nucleolus Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleolus. NMDCO_relaxed.owl GO:1904751 biolink:NamedThing positive regulation of protein localization to nucleolus Any process that activates or increases the frequency, rate or extent of protein localization to nucleolus. NMDCO_relaxed.owl GO:1904776 biolink:NamedThing regulation of protein localization to cell cortex Any process that modulates the frequency, rate or extent of protein localization to cell cortex. NMDCO_relaxed.owl GO:1904777 biolink:NamedThing negative regulation of protein localization to cell cortex Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell cortex. NMDCO_relaxed.owl GO:1904778 biolink:NamedThing positive regulation of protein localization to cell cortex Any process that activates or increases the frequency, rate or extent of protein localization to cell cortex. NMDCO_relaxed.owl GO:1904829 biolink:NamedThing regulation of aortic smooth muscle cell differentiation Any process that modulates the frequency, rate or extent of aortic smooth muscle cell differentiation. NMDCO_relaxed.owl GO:1904830 biolink:NamedThing negative regulation of aortic smooth muscle cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of aortic smooth muscle cell differentiation. NMDCO_relaxed.owl GO:1904831 biolink:NamedThing positive regulation of aortic smooth muscle cell differentiation Any process that activates or increases the frequency, rate or extent of aortic smooth muscle cell differentiation. NMDCO_relaxed.owl GO:1904933 biolink:NamedThing regulation of cell proliferation in midbrain Any process that modulates the frequency, rate or extent of cell proliferation in midbrain. NMDCO_relaxed.owl GO:1904934 biolink:NamedThing negative regulation of cell proliferation in midbrain Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation in midbrain. NMDCO_relaxed.owl GO:1904935 biolink:NamedThing positive regulation of cell proliferation in midbrain Any process that activates or increases the frequency, rate or extent of cell proliferation in midbrain. NMDCO_relaxed.owl GO:1904942 biolink:NamedThing regulation of cardiac ventricle formation Any process that modulates the frequency, rate or extent of cardiac ventricle formation. NMDCO_relaxed.owl GO:1904943 biolink:NamedThing negative regulation of cardiac ventricle formation Any process that stops, prevents or reduces the frequency, rate or extent of cardiac ventricle formation. NMDCO_relaxed.owl GO:1904944 biolink:NamedThing positive regulation of cardiac ventricle formation Any process that activates or increases the frequency, rate or extent of cardiac ventricle formation. NMDCO_relaxed.owl GO:1904950 biolink:NamedThing negative regulation of establishment of protein localization Any process that stops, prevents or reduces the frequency, rate or extent of establishment of protein localization. NMDCO_relaxed.owl GO:1904951 biolink:NamedThing positive regulation of establishment of protein localization Any process that activates or increases the frequency, rate or extent of establishment of protein localization. NMDCO_relaxed.owl GO:1905063 biolink:NamedThing regulation of vascular associated smooth muscle cell differentiation Any process that modulates the frequency, rate or extent of vascular smooth muscle cell differentiation. NMDCO_relaxed.owl GO:1905064 biolink:NamedThing negative regulation of vascular associated smooth muscle cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell differentiation. NMDCO_relaxed.owl GO:1905065 biolink:NamedThing positive regulation of vascular associated smooth muscle cell differentiation Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell differentiation. NMDCO_relaxed.owl GO:1905126 biolink:NamedThing regulation of axo-dendritic protein transport Any process that modulates the frequency, rate or extent of axo-dendritic protein transport. NMDCO_relaxed.owl GO:1905127 biolink:NamedThing negative regulation of axo-dendritic protein transport Any process that stops, prevents or reduces the frequency, rate or extent of axo-dendritic protein transport. NMDCO_relaxed.owl GO:1905128 biolink:NamedThing positive regulation of axo-dendritic protein transport Any process that activates or increases the frequency, rate or extent of axo-dendritic protein transport. NMDCO_relaxed.owl GO:1905140 biolink:NamedThing regulation of apical ectodermal ridge formation Any process that modulates the frequency, rate or extent of apical ectodermal ridge formation. NMDCO_relaxed.owl GO:1905141 biolink:NamedThing negative regulation of apical ectodermal ridge formation Any process that stops, prevents or reduces the frequency, rate or extent of apical ectodermal ridge formation. NMDCO_relaxed.owl GO:1905142 biolink:NamedThing positive regulation of apical ectodermal ridge formation Any process that activates or increases the frequency, rate or extent of apical ectodermal ridge formation. NMDCO_relaxed.owl GO:1905147 biolink:NamedThing regulation of smooth muscle hypertrophy Any process that modulates the frequency, rate or extent of smooth muscle hypertrophy. NMDCO_relaxed.owl GO:1905148 biolink:NamedThing negative regulation of smooth muscle hypertrophy Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle hypertrophy. NMDCO_relaxed.owl GO:1905149 biolink:NamedThing positive regulation of smooth muscle hypertrophy Any process that activates or increases the frequency, rate or extent of smooth muscle hypertrophy. NMDCO_relaxed.owl GO:1905207 biolink:NamedThing regulation of cardiocyte differentiation Any process that modulates the frequency, rate or extent of cardiocyte differentiation. NMDCO_relaxed.owl GO:1905208 biolink:NamedThing negative regulation of cardiocyte differentiation Any process that stops, prevents or reduces the frequency, rate or extent of cardiocyte differentiation. NMDCO_relaxed.owl GO:1905209 biolink:NamedThing positive regulation of cardiocyte differentiation Any process that activates or increases the frequency, rate or extent of cardiocyte differentiation. NMDCO_relaxed.owl GO:1905213 biolink:NamedThing negative regulation of mitotic chromosome condensation Any process that stops, prevents or reduces the frequency, rate or extent of mitotic chromosome condensation. NMDCO_relaxed.owl GO:1905268 biolink:NamedThing negative regulation of chromatin organization Any process that stops, prevents or reduces the frequency, rate or extent of chromatin organization. NMDCO_relaxed.owl GO:1905269 biolink:NamedThing positive regulation of chromatin organization Any process that activates or increases the frequency, rate or extent of chromatin organization. NMDCO_relaxed.owl GO:1905276 biolink:NamedThing regulation of epithelial tube formation Any process that modulates the frequency, rate or extent of epithelial tube formation. NMDCO_relaxed.owl GO:1905277 biolink:NamedThing negative regulation of epithelial tube formation Any process that stops, prevents or reduces the frequency, rate or extent of epithelial tube formation. NMDCO_relaxed.owl GO:1905278 biolink:NamedThing positive regulation of epithelial tube formation Any process that activates or increases the frequency, rate or extent of epithelial tube formation. NMDCO_relaxed.owl GO:1905292 biolink:NamedThing regulation of neural crest cell differentiation Any process that modulates the frequency, rate or extent of neural crest cell differentiation. NMDCO_relaxed.owl GO:1905293 biolink:NamedThing negative regulation of neural crest cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell differentiation. NMDCO_relaxed.owl GO:1905294 biolink:NamedThing positive regulation of neural crest cell differentiation Any process that activates or increases the frequency, rate or extent of neural crest cell differentiation. NMDCO_relaxed.owl GO:1905298 biolink:NamedThing regulation of intestinal epithelial cell development Any process that modulates the frequency, rate or extent of intestinal epithelial cell development. NMDCO_relaxed.owl GO:1905299 biolink:NamedThing negative regulation of intestinal epithelial cell development Any process that stops, prevents or reduces the frequency, rate or extent of intestinal epithelial cell development. NMDCO_relaxed.owl GO:1905300 biolink:NamedThing positive regulation of intestinal epithelial cell development Any process that activates or increases the frequency, rate or extent of intestinal epithelial cell development. NMDCO_relaxed.owl GO:1905304 biolink:NamedThing regulation of cardiac myofibril assembly Any process that modulates the frequency, rate or extent of cardiac myofibril assembly. NMDCO_relaxed.owl GO:1905305 biolink:NamedThing negative regulation of cardiac myofibril assembly Any process that stops, prevents or reduces the frequency, rate or extent of cardiac myofibril assembly. NMDCO_relaxed.owl GO:1905306 biolink:NamedThing positive regulation of cardiac myofibril assembly Any process that activates or increases the frequency, rate or extent of cardiac myofibril assembly. NMDCO_relaxed.owl GO:1905330 biolink:NamedThing regulation of morphogenesis of an epithelium Any process that modulates the frequency, rate or extent of morphogenesis of an epithelium. NMDCO_relaxed.owl GO:1905331 biolink:NamedThing negative regulation of morphogenesis of an epithelium Any process that stops, prevents or reduces the frequency, rate or extent of morphogenesis of an epithelium. NMDCO_relaxed.owl GO:1905332 biolink:NamedThing positive regulation of morphogenesis of an epithelium Any process that activates or increases the frequency, rate or extent of morphogenesis of an epithelium. NMDCO_relaxed.owl GO:1905384 biolink:NamedThing regulation of protein localization to presynapse Any process that modulates the frequency, rate or extent of protein localization to presynapse. NMDCO_relaxed.owl GO:1905385 biolink:NamedThing negative regulation of protein localization to presynapse Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to presynapse. NMDCO_relaxed.owl GO:1905386 biolink:NamedThing positive regulation of protein localization to presynapse Any process that activates or increases the frequency, rate or extent of protein localization to presynapse. NMDCO_relaxed.owl GO:1905432 biolink:NamedThing regulation of retrograde trans-synaptic signaling by neuropeptide Any process that modulates the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide. NMDCO_relaxed.owl GO:1905433 biolink:NamedThing negative regulation of retrograde trans-synaptic signaling by neuropeptide Any process that stops, prevents or reduces the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide. NMDCO_relaxed.owl GO:1905434 biolink:NamedThing positive regulation of retrograde trans-synaptic signaling by neuropeptide Any process that activates or increases the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide. NMDCO_relaxed.owl GO:1905453 biolink:NamedThing regulation of myeloid progenitor cell differentiation Any process that modulates the frequency, rate or extent of myeloid progenitor cell differentiation. NMDCO_relaxed.owl GO:1905454 biolink:NamedThing negative regulation of myeloid progenitor cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of myeloid progenitor cell differentiation. NMDCO_relaxed.owl GO:1905455 biolink:NamedThing positive regulation of myeloid progenitor cell differentiation Any process that activates or increases the frequency, rate or extent of myeloid progenitor cell differentiation. NMDCO_relaxed.owl GO:1905459 biolink:NamedThing regulation of vascular associated smooth muscle cell apoptotic process Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process. NMDCO_relaxed.owl GO:1905460 biolink:NamedThing negative regulation of vascular associated smooth muscle cell apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process. NMDCO_relaxed.owl GO:1905461 biolink:NamedThing positive regulation of vascular associated smooth muscle cell apoptotic process Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process. NMDCO_relaxed.owl GO:1905475 biolink:NamedThing regulation of protein localization to membrane Any process that modulates the frequency, rate or extent of protein localization to membrane. NMDCO_relaxed.owl GO:1905476 biolink:NamedThing negative regulation of protein localization to membrane Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to membrane. NMDCO_relaxed.owl GO:1905477 biolink:NamedThing positive regulation of protein localization to membrane Any process that activates or increases the frequency, rate or extent of protein localization to membrane. NMDCO_relaxed.owl GO:1905492 biolink:NamedThing positive regulation of branching morphogenesis of a nerve Any process that activates or increases the frequency, rate or extent of branching morphogenesis of a nerve. NMDCO_relaxed.owl GO:1905516 biolink:NamedThing positive regulation of fertilization Any process that activates or increases the frequency, rate or extent of fertilization. NMDCO_relaxed.owl GO:1905553 biolink:NamedThing regulation of blood vessel branching Any process that modulates the frequency, rate or extent of blood vessel branching. NMDCO_relaxed.owl GO:1905554 biolink:NamedThing negative regulation of vessel branching Any process that stops, prevents or reduces the frequency, rate or extent of blood vessel branching. NMDCO_relaxed.owl GO:1905555 biolink:NamedThing positive regulation of blood vessel branching Any process that activates or increases the frequency, rate or extent of blood vessel branching. NMDCO_relaxed.owl GO:1905557 biolink:NamedThing regulation of mitotic nuclear envelope disassembly Any process that modulates the frequency, rate or extent of mitotic nuclear envelope disassembly. NMDCO_relaxed.owl GO:1905558 biolink:NamedThing negative regulation of mitotic nuclear envelope disassembly Any process that stops, prevents or reduces the frequency, rate or extent of mitotic nuclear envelope disassembly. NMDCO_relaxed.owl GO:1905559 biolink:NamedThing positive regulation of mitotic nuclear envelope disassembly Any process that activates or increases the frequency, rate or extent of mitotic nuclear envelope disassembly. NMDCO_relaxed.owl GO:1905562 biolink:NamedThing regulation of vascular endothelial cell proliferation Any process that modulates the frequency, rate or extent of vascular endothelial cell proliferation. NMDCO_relaxed.owl GO:1905563 biolink:NamedThing negative regulation of vascular endothelial cell proliferation Any process that stops, prevents or reduces the frequency, rate or extent of vascular endothelial cell proliferation. NMDCO_relaxed.owl GO:1905564 biolink:NamedThing positive regulation of vascular endothelial cell proliferation Any process that activates or increases the frequency, rate or extent of vascular endothelial cell proliferation. NMDCO_relaxed.owl GO:1905606 biolink:NamedThing regulation of presynapse assembly Any process that modulates the frequency, rate or extent of presynapse assembly. NMDCO_relaxed.owl GO:1905607 biolink:NamedThing negative regulation of presynapse assembly Any process that stops, prevents or reduces the frequency, rate or extent of presynapse assembly. NMDCO_relaxed.owl GO:1905608 biolink:NamedThing positive regulation of presynapse assembly Any process that activates or increases the frequency, rate or extent of presynapse assembly. NMDCO_relaxed.owl GO:1905627 biolink:NamedThing regulation of serotonin biosynthetic process Any process that modulates the frequency, rate or extent of serotonin biosynthetic process. NMDCO_relaxed.owl GO:1905628 biolink:NamedThing negative regulation of serotonin biosynthetic process Any process that stops, prevents or reduces the frequency, rate or extent of serotonin biosynthetic process. NMDCO_relaxed.owl GO:1905629 biolink:NamedThing positive regulation of serotonin biosynthetic process Any process that activates or increases the frequency, rate or extent of serotonin biosynthetic process. NMDCO_relaxed.owl GO:1905634 biolink:NamedThing regulation of protein localization to chromatin Any process that modulates the frequency, rate or extent of protein localization to chromatin. NMDCO_relaxed.owl GO:1905651 biolink:NamedThing regulation of artery morphogenesis Any process that modulates the frequency, rate or extent of artery morphogenesis. NMDCO_relaxed.owl GO:1905652 biolink:NamedThing negative regulation of artery morphogenesis Any process that stops, prevents or reduces the frequency, rate or extent of artery morphogenesis. NMDCO_relaxed.owl GO:1905653 biolink:NamedThing positive regulation of artery morphogenesis Any process that activates or increases the frequency, rate or extent of artery morphogenesis. NMDCO_relaxed.owl GO:1905770 biolink:NamedThing regulation of mesodermal cell differentiation Any process that modulates the frequency, rate or extent of mesodermal cell differentiation. NMDCO_relaxed.owl GO:1905771 biolink:NamedThing negative regulation of mesodermal cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of mesodermal cell differentiation. NMDCO_relaxed.owl GO:1905772 biolink:NamedThing positive regulation of mesodermal cell differentiation Any process that activates or increases the frequency, rate or extent of mesodermal cell differentiation. NMDCO_relaxed.owl GO:1905806 biolink:NamedThing regulation of synapse pruning Any process that modulates the frequency, rate or extent of synapse pruning. NMDCO_relaxed.owl GO:1905807 biolink:NamedThing negative regulation of synapse pruning Any process that stops, prevents or reduces the frequency, rate or extent of synapse pruning. NMDCO_relaxed.owl GO:1905808 biolink:NamedThing positive regulation of synapse pruning Any process that activates or increases the frequency, rate or extent of synapse pruning. NMDCO_relaxed.owl GO:1905809 biolink:NamedThing negative regulation of synapse organization Any process that stops, prevents or reduces the frequency, rate or extent of synapse organization. NMDCO_relaxed.owl GO:1905821 biolink:NamedThing positive regulation of chromosome condensation Any process that activates or increases the frequency, rate or extent of chromosome condensation. NMDCO_relaxed.owl GO:1905833 biolink:NamedThing negative regulation of microtubule nucleation Any process that stops, prevents or reduces the frequency, rate or extent of microtubule nucleation. NMDCO_relaxed.owl GO:1905871 biolink:NamedThing regulation of protein localization to cell leading edge Any process that modulates the frequency, rate or extent of protein localization to cell leading edge. NMDCO_relaxed.owl GO:1905872 biolink:NamedThing negative regulation of protein localization to cell leading edge Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell leading edge. NMDCO_relaxed.owl GO:1905873 biolink:NamedThing positive regulation of protein localization to cell leading edge Any process that activates or increases the frequency, rate or extent of protein localization to cell leading edge. NMDCO_relaxed.owl GO:1905879 biolink:NamedThing regulation of oogenesis Any process that modulates the frequency, rate or extent of oogenesis. NMDCO_relaxed.owl GO:1905880 biolink:NamedThing negative regulation of oogenesis Any process that stops, prevents or reduces the frequency, rate or extent of oogenesis. NMDCO_relaxed.owl GO:1905881 biolink:NamedThing positive regulation of oogenesis Any process that activates or increases the frequency, rate or extent of oogenesis. NMDCO_relaxed.owl GO:1905899 biolink:NamedThing regulation of smooth muscle tissue development Any process that modulates the frequency, rate or extent of smooth muscle tissue development. NMDCO_relaxed.owl GO:1905900 biolink:NamedThing negative regulation of smooth muscle tissue development Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle tissue development. NMDCO_relaxed.owl GO:1905901 biolink:NamedThing positive regulation of smooth muscle tissue development Any process that activates or increases the frequency, rate or extent of smooth muscle tissue development. NMDCO_relaxed.owl GO:1905902 biolink:NamedThing regulation of mesoderm formation Any process that modulates the frequency, rate or extent of mesoderm formation. NMDCO_relaxed.owl GO:1905903 biolink:NamedThing negative regulation of mesoderm formation Any process that stops, prevents or reduces the frequency, rate or extent of mesoderm formation. NMDCO_relaxed.owl GO:1905904 biolink:NamedThing positive regulation of mesoderm formation Any process that activates or increases the frequency, rate or extent of mesoderm formation. NMDCO_relaxed.owl GO:1905921 biolink:NamedThing regulation of acetylcholine biosynthetic process Any process that modulates the frequency, rate or extent of acetylcholine biosynthetic process. NMDCO_relaxed.owl GO:1905922 biolink:NamedThing negative regulation of acetylcholine biosynthetic process Any process that stops, prevents or reduces the frequency, rate or extent of acetylcholine biosynthetic process. NMDCO_relaxed.owl GO:1905923 biolink:NamedThing positive regulation of acetylcholine biosynthetic process Any process that activates or increases the frequency, rate or extent of acetylcholine biosynthetic process. NMDCO_relaxed.owl GO:1905936 biolink:NamedThing regulation of germ cell proliferation Any process that modulates the frequency, rate or extent of germ cell proliferation. NMDCO_relaxed.owl GO:1905937 biolink:NamedThing negative regulation of germ cell proliferation Any process that stops, prevents or reduces the frequency, rate or extent of germ cell proliferation. NMDCO_relaxed.owl GO:1905938 biolink:NamedThing positive regulation of germ cell proliferation Any process that activates or increases the frequency, rate or extent of germ cell proliferation. NMDCO_relaxed.owl GO:1905939 biolink:NamedThing regulation of gonad development Any process that modulates the frequency, rate or extent of gonad development. NMDCO_relaxed.owl GO:1905940 biolink:NamedThing negative regulation of gonad development Any process that stops, prevents or reduces the frequency, rate or extent of gonad development. NMDCO_relaxed.owl GO:1905941 biolink:NamedThing positive regulation of gonad development Any process that activates or increases the frequency, rate or extent of gonad development. NMDCO_relaxed.owl GO:1905952 biolink:NamedThing regulation of lipid localization Any process that modulates the frequency, rate or extent of lipid localization. NMDCO_relaxed.owl GO:1905953 biolink:NamedThing negative regulation of lipid localization Any process that stops, prevents or reduces the frequency, rate or extent of lipid localization. NMDCO_relaxed.owl GO:1905954 biolink:NamedThing positive regulation of lipid localization Any process that activates or increases the frequency, rate or extent of lipid localization. NMDCO_relaxed.owl GO:1905955 biolink:NamedThing negative regulation of endothelial tube morphogenesis Any process that stops, prevents or reduces the frequency, rate or extent of endothelial tube morphogenesis. NMDCO_relaxed.owl GO:1905956 biolink:NamedThing positive regulation of endothelial tube morphogenesis Any process that activates or increases the frequency, rate or extent of endothelial tube morphogenesis. NMDCO_relaxed.owl GO:2000026 biolink:NamedThing regulation of multicellular organismal development Any process that modulates the frequency, rate or extent of multicellular organismal development. NMDCO_relaxed.owl GO:2000027 biolink:NamedThing regulation of animal organ morphogenesis Any process that modulates the frequency, rate or extent of animal organ morphogenesis. NMDCO_relaxed.owl GO:2000035 biolink:NamedThing regulation of stem cell division Any process that modulates the frequency, rate or extent of stem cell division. NMDCO_relaxed.owl GO:2000074 biolink:NamedThing regulation of type B pancreatic cell development Any process that modulates the frequency, rate or extent of pancreatic B cell development. NMDCO_relaxed.owl GO:2000077 biolink:NamedThing negative regulation of type B pancreatic cell development Any process that stops, prevents, or reduces the frequency, rate or extent of pancreatic B cell development. NMDCO_relaxed.owl GO:2000078 biolink:NamedThing positive regulation of type B pancreatic cell development Any process that activates or increases the frequency, rate or extent of pancreatic B cell development. NMDCO_relaxed.owl GO:2000106 biolink:NamedThing regulation of leukocyte apoptotic process Any process that modulates the frequency, rate or extent of leukocyte apoptotic process. NMDCO_relaxed.owl GO:2000107 biolink:NamedThing negative regulation of leukocyte apoptotic process Any process that stops, prevents, or reduces the frequency, rate or extent of leukocyte apoptotic process. NMDCO_relaxed.owl GO:2000108 biolink:NamedThing positive regulation of leukocyte apoptotic process Any process that activates or increases the frequency, rate or extent of leukocyte apoptotic process. NMDCO_relaxed.owl GO:2000114 biolink:NamedThing regulation of establishment of cell polarity Any process that modulates the frequency, rate or extent of establishment of cell polarity. NMDCO_relaxed.owl GO:2000136 biolink:NamedThing regulation of cell proliferation involved in heart morphogenesis Any process that modulates the frequency, rate or extent of cell proliferation involved in heart morphogenesis. NMDCO_relaxed.owl GO:2000137 biolink:NamedThing negative regulation of cell proliferation involved in heart morphogenesis Any process that stops, prevents, or reduces the frequency, rate or extent of cell proliferation involved in heart morphogenesis. NMDCO_relaxed.owl GO:2000138 biolink:NamedThing positive regulation of cell proliferation involved in heart morphogenesis Any process that activates or increases the frequency, rate or extent of cell proliferation involved in heart morphogenesis. NMDCO_relaxed.owl GO:2000145 biolink:NamedThing regulation of cell motility Any process that modulates the frequency, rate or extent of cell motility. NMDCO_relaxed.owl GO:2000146 biolink:NamedThing negative regulation of cell motility Any process that stops, prevents, or reduces the frequency, rate or extent of cell motility. NMDCO_relaxed.owl GO:2000147 biolink:NamedThing positive regulation of cell motility Any process that activates or increases the frequency, rate or extent of cell motility. NMDCO_relaxed.owl GO:2000172 biolink:NamedThing regulation of branching morphogenesis of a nerve Any process that modulates the frequency, rate or extent of branching morphogenesis of a nerve. NMDCO_relaxed.owl GO:2000173 biolink:NamedThing negative regulation of branching morphogenesis of a nerve Any process that stops, prevents, or reduces the frequency, rate or extent of branching morphogenesis of a nerve. NMDCO_relaxed.owl GO:2000177 biolink:NamedThing regulation of neural precursor cell proliferation Any process that modulates the frequency, rate or extent of neural precursor cell proliferation. NMDCO_relaxed.owl GO:2000178 biolink:NamedThing negative regulation of neural precursor cell proliferation Any process that stops, prevents, or reduces the frequency, rate or extent of neural precursor cell proliferation. NMDCO_relaxed.owl GO:2000179 biolink:NamedThing positive regulation of neural precursor cell proliferation Any process that activates or increases the frequency, rate or extent of neural precursor cell proliferation. NMDCO_relaxed.owl GO:2000181 biolink:NamedThing negative regulation of blood vessel morphogenesis Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel morphogenesis. NMDCO_relaxed.owl GO:2000185 biolink:NamedThing regulation of phosphate transmembrane transport Any process that modulates the frequency, rate or extent of phosphate transmembrane transport. NMDCO_relaxed.owl GO:2000186 biolink:NamedThing negative regulation of phosphate transmembrane transport Any process that stops, prevents, or reduces the frequency, rate or extent of phosphate transmembrane transport. NMDCO_relaxed.owl GO:2000187 biolink:NamedThing positive regulation of phosphate transmembrane transport Any process that activates or increases the frequency, rate or extent of phosphate transmembrane transport. NMDCO_relaxed.owl GO:2000194 biolink:NamedThing regulation of female gonad development Any process that modulates the frequency, rate or extent of female gonad development. NMDCO_relaxed.owl GO:2000195 biolink:NamedThing negative regulation of female gonad development Any process that stops, prevents, or reduces the frequency, rate or extent of female gonad development. NMDCO_relaxed.owl GO:2000196 biolink:NamedThing positive regulation of female gonad development Any process that activates or increases the frequency, rate or extent of female gonad development. NMDCO_relaxed.owl GO:2000226 biolink:NamedThing regulation of pancreatic A cell differentiation Any process that modulates the frequency, rate or extent of pancreatic A cell differentiation. NMDCO_relaxed.owl GO:2000227 biolink:NamedThing negative regulation of pancreatic A cell differentiation Any process that stops, prevents, or reduces the frequency, rate or extent of pancreatic A cell differentiation. NMDCO_relaxed.owl GO:2000228 biolink:NamedThing positive regulation of pancreatic A cell differentiation Any process that activates or increases the frequency, rate or extent of pancreatic A cell differentiation. NMDCO_relaxed.owl GO:2000241 biolink:NamedThing regulation of reproductive process Any process that modulates the frequency, rate or extent of reproductive process. NMDCO_relaxed.owl GO:2000242 biolink:NamedThing negative regulation of reproductive process Any process that stops, prevents, or reduces the frequency, rate or extent of reproductive process. NMDCO_relaxed.owl GO:2000243 biolink:NamedThing positive regulation of reproductive process Any process that activates or increases the frequency, rate or extent of reproductive process. NMDCO_relaxed.owl GO:2000248 biolink:NamedThing negative regulation of establishment or maintenance of neuroblast polarity Any process that stops, prevents, or reduces the frequency, rate or extent of establishment or maintenance of neuroblast polarity. NMDCO_relaxed.owl GO:2000269 biolink:NamedThing regulation of fibroblast apoptotic process Any process that modulates the frequency, rate or extent of fibroblast apoptotic process. NMDCO_relaxed.owl GO:2000270 biolink:NamedThing negative regulation of fibroblast apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast apoptotic process. NMDCO_relaxed.owl GO:2000271 biolink:NamedThing positive regulation of fibroblast apoptotic process Any process that activates or increases the frequency, rate or extent of fibroblast apoptotic process. NMDCO_relaxed.owl GO:2000278 biolink:NamedThing regulation of DNA biosynthetic process Any process that modulates the frequency, rate or extent of DNA biosynthetic process. NMDCO_relaxed.owl GO:2000279 biolink:NamedThing negative regulation of DNA biosynthetic process Any process that stops, prevents or reduces the frequency, rate or extent of DNA biosynthetic process. NMDCO_relaxed.owl GO:2000282 biolink:NamedThing regulation of cellular amino acid biosynthetic process Any process that modulates the frequency, rate or extent of cellular amino acid biosynthetic process. NMDCO_relaxed.owl GO:2000283 biolink:NamedThing negative regulation of amino acid biosynthetic process Any process that stops, prevents or reduces the frequency, rate or extent of an amino acid biosynthetic process. NMDCO_relaxed.owl GO:2000284 biolink:NamedThing positive regulation of amino acid biosynthetic process Any process that activates or increases the frequency, rate or extent of cellular amino acid biosynthetic process. NMDCO_relaxed.owl GO:2000287 biolink:NamedThing positive regulation of myotome development Any process that activates or increases the frequency, rate or extent of myotome development. NMDCO_relaxed.owl GO:2000288 biolink:NamedThing positive regulation of myoblast proliferation Any process that activates or increases the frequency, rate or extent of myoblast proliferation. NMDCO_relaxed.owl GO:2000290 biolink:NamedThing regulation of myotome development Any process that modulates the frequency, rate or extent of myotome development. NMDCO_relaxed.owl GO:2000291 biolink:NamedThing regulation of myoblast proliferation Any process that modulates the frequency, rate or extent of myoblast proliferation. NMDCO_relaxed.owl GO:2000292 biolink:NamedThing regulation of defecation Any process that modulates the frequency, rate or extent of defecation. NMDCO_relaxed.owl GO:2000293 biolink:NamedThing negative regulation of defecation Any process that stops, prevents or reduces the frequency, rate or extent of defecation. NMDCO_relaxed.owl GO:2000294 biolink:NamedThing positive regulation of defecation Any process that activates or increases the frequency, rate or extent of defecation. NMDCO_relaxed.owl GO:2000351 biolink:NamedThing regulation of endothelial cell apoptotic process Any process that modulates the frequency, rate or extent of endothelial cell apoptotic process. NMDCO_relaxed.owl GO:2000352 biolink:NamedThing negative regulation of endothelial cell apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell apoptotic process. NMDCO_relaxed.owl GO:2000353 biolink:NamedThing positive regulation of endothelial cell apoptotic process Any process that activates or increases the frequency, rate or extent of endothelial cell apoptotic process. NMDCO_relaxed.owl GO:2000374 biolink:NamedThing regulation of oxygen metabolic process Any process that modulates the frequency, rate or extent of oxygen metabolic process. NMDCO_relaxed.owl GO:2000375 biolink:NamedThing negative regulation of oxygen metabolic process Any process that stops, prevents or reduces the frequency, rate or extent of oxygen metabolic process. NMDCO_relaxed.owl GO:2000376 biolink:NamedThing positive regulation of oxygen metabolic process Any process that activates or increases the frequency, rate or extent of oxygen metabolic process. NMDCO_relaxed.owl GO:2000380 biolink:NamedThing regulation of mesoderm development Any process that modulates the frequency, rate or extent of mesoderm development. NMDCO_relaxed.owl GO:2000381 biolink:NamedThing negative regulation of mesoderm development Any process that stops, prevents or reduces the frequency, rate or extent of mesoderm development. NMDCO_relaxed.owl GO:2000382 biolink:NamedThing positive regulation of mesoderm development Any process that activates or increases the frequency, rate or extent of mesoderm development. NMDCO_relaxed.owl GO:2000383 biolink:NamedThing regulation of ectoderm development Any process that modulates the frequency, rate or extent of ectoderm development. NMDCO_relaxed.owl GO:2000384 biolink:NamedThing negative regulation of ectoderm development Any process that stops, prevents or reduces the frequency, rate or extent of ectoderm development. NMDCO_relaxed.owl GO:2000385 biolink:NamedThing positive regulation of ectoderm development Any process that activates or increases the frequency, rate or extent of ectoderm development. NMDCO_relaxed.owl GO:2000495 biolink:NamedThing regulation of cell proliferation involved in compound eye morphogenesis Any process that modulates the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis. NMDCO_relaxed.owl GO:2000496 biolink:NamedThing negative regulation of cell proliferation involved in compound eye morphogenesis Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis. NMDCO_relaxed.owl GO:2000497 biolink:NamedThing positive regulation of cell proliferation involved in compound eye morphogenesis Any process that activates or increases the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis. NMDCO_relaxed.owl GO:2000542 biolink:NamedThing negative regulation of gastrulation Any process that stops, prevents or reduces the frequency, rate or extent of gastrulation. NMDCO_relaxed.owl GO:2000543 biolink:NamedThing positive regulation of gastrulation Any process that activates or increases the frequency, rate or extent of gastrulation. NMDCO_relaxed.owl GO:2000573 biolink:NamedThing positive regulation of DNA biosynthetic process Any process that activates or increases the frequency, rate or extent of DNA biosynthetic process. NMDCO_relaxed.owl GO:2000647 biolink:NamedThing negative regulation of stem cell proliferation Any process that stops, prevents or reduces the frequency, rate or extent of stem cell proliferation. NMDCO_relaxed.owl GO:2000648 biolink:NamedThing positive regulation of stem cell proliferation Any process that activates or increases the frequency, rate or extent of stem cell proliferation. NMDCO_relaxed.owl GO:2000649 biolink:NamedThing regulation of sodium ion transmembrane transporter activity Any process that modulates the frequency, rate or extent of sodium ion transmembrane transporter activity. NMDCO_relaxed.owl GO:2000650 biolink:NamedThing negative regulation of sodium ion transmembrane transporter activity Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transporter activity. NMDCO_relaxed.owl GO:2000651 biolink:NamedThing positive regulation of sodium ion transmembrane transporter activity Any process that activates or increases the frequency, rate or extent of sodium ion transmembrane transporter activity. NMDCO_relaxed.owl GO:2000671 biolink:NamedThing regulation of motor neuron apoptotic process Any process that modulates the frequency, rate or extent of motor neuron apoptotic process. NMDCO_relaxed.owl GO:2000672 biolink:NamedThing negative regulation of motor neuron apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of motor neuron apoptotic process. NMDCO_relaxed.owl GO:2000673 biolink:NamedThing positive regulation of motor neuron apoptotic process Any process that activates or increases the frequency, rate or extent of motor neuron apoptotic process. NMDCO_relaxed.owl GO:2000674 biolink:NamedThing regulation of type B pancreatic cell apoptotic process Any process that modulates the frequency, rate or extent of type B pancreatic cell apoptotic process. NMDCO_relaxed.owl GO:2000675 biolink:NamedThing negative regulation of type B pancreatic cell apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of type B pancreatic cell apoptotic process. NMDCO_relaxed.owl GO:2000676 biolink:NamedThing positive regulation of type B pancreatic cell apoptotic process Any process that activates or increases the frequency, rate or extent of type B pancreatic cell apoptotic process. NMDCO_relaxed.owl GO:2000690 biolink:NamedThing regulation of cardiac muscle cell myoblast differentiation Any process that modulates the frequency, rate or extent of cardiac muscle cell myoblast differentiation. NMDCO_relaxed.owl GO:2000691 biolink:NamedThing negative regulation of cardiac muscle cell myoblast differentiation Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell myoblast differentiation. NMDCO_relaxed.owl GO:2000700 biolink:NamedThing positive regulation of cardiac muscle cell myoblast differentiation Any process that activates or increases the frequency, rate or extent of cardiac muscle cell myoblast differentiation. NMDCO_relaxed.owl GO:2000725 biolink:NamedThing regulation of cardiac muscle cell differentiation Any process that modulates the frequency, rate or extent of cardiac muscle cell differentiation. NMDCO_relaxed.owl GO:2000726 biolink:NamedThing negative regulation of cardiac muscle cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell differentiation. NMDCO_relaxed.owl GO:2000727 biolink:NamedThing positive regulation of cardiac muscle cell differentiation Any process that activates or increases the frequency, rate or extent of cardiac muscle cell differentiation. NMDCO_relaxed.owl GO:2000736 biolink:NamedThing regulation of stem cell differentiation Any process that modulates the frequency, rate or extent of stem cell differentiation. NMDCO_relaxed.owl GO:2000737 biolink:NamedThing negative regulation of stem cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of stem cell differentiation. NMDCO_relaxed.owl GO:2000738 biolink:NamedThing positive regulation of stem cell differentiation Any process that activates or increases the frequency, rate or extent of stem cell differentiation. NMDCO_relaxed.owl GO:2000790 biolink:NamedThing regulation of mesenchymal cell proliferation involved in lung development Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation involved in lung development. NMDCO_relaxed.owl GO:2000791 biolink:NamedThing negative regulation of mesenchymal cell proliferation involved in lung development Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell proliferation involved in lung development. NMDCO_relaxed.owl GO:2000792 biolink:NamedThing positive regulation of mesenchymal cell proliferation involved in lung development Any process that activates or increases the frequency, rate or extent of mesenchymal cell proliferation involved in lung development. NMDCO_relaxed.owl GO:2000794 biolink:NamedThing regulation of epithelial cell proliferation involved in lung morphogenesis Any process that modulates the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis. NMDCO_relaxed.owl GO:2000795 biolink:NamedThing negative regulation of epithelial cell proliferation involved in lung morphogenesis Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis. NMDCO_relaxed.owl GO:2000818 biolink:NamedThing negative regulation of myoblast proliferation Any process that stops, prevents or reduces the frequency, rate or extent of myoblast proliferation. NMDCO_relaxed.owl GO:2000826 biolink:NamedThing regulation of heart morphogenesis Any process that modulates the frequency, rate or extent of heart morphogenesis. NMDCO_relaxed.owl GO:2000831 biolink:NamedThing regulation of steroid hormone secretion Any process that modulates the frequency, rate or extent of steroid hormone secretion. NMDCO_relaxed.owl GO:2000832 biolink:NamedThing negative regulation of steroid hormone secretion Any process that stops, prevents or reduces the frequency, rate or extent of steroid hormone secretion. NMDCO_relaxed.owl GO:2000833 biolink:NamedThing positive regulation of steroid hormone secretion Any process that activates or increases the frequency, rate or extent of steroid hormone secretion. NMDCO_relaxed.owl GO:2000834 biolink:NamedThing regulation of androgen secretion Any process that modulates the frequency, rate or extent of androgen secretion. NMDCO_relaxed.owl GO:2000835 biolink:NamedThing negative regulation of androgen secretion Any process that stops, prevents or reduces the frequency, rate or extent of androgen secretion. NMDCO_relaxed.owl GO:2000836 biolink:NamedThing positive regulation of androgen secretion Any process that activates or increases the frequency, rate or extent of androgen secretion. NMDCO_relaxed.owl GO:2001014 biolink:NamedThing regulation of skeletal muscle cell differentiation Any process that modulates the frequency, rate or extent of skeletal muscle cell differentiation. NMDCO_relaxed.owl GO:2001015 biolink:NamedThing negative regulation of skeletal muscle cell differentiation Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle cell differentiation. NMDCO_relaxed.owl GO:2001016 biolink:NamedThing positive regulation of skeletal muscle cell differentiation Any process that activates or increases the frequency, rate or extent of skeletal muscle cell differentiation. NMDCO_relaxed.owl GO:2001053 biolink:NamedThing regulation of mesenchymal cell apoptotic process Any process that modulates the frequency, rate or extent of mesenchymal cell apoptotic process. NMDCO_relaxed.owl GO:2001054 biolink:NamedThing negative regulation of mesenchymal cell apoptotic process Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell apoptotic process. NMDCO_relaxed.owl GO:2001055 biolink:NamedThing positive regulation of mesenchymal cell apoptotic process Any process that activates or increases the frequency, rate or extent of mesenchymal cell apoptotic process. NMDCO_relaxed.owl GO:2001141 biolink:NamedThing regulation of RNA biosynthetic process Any process that modulates the frequency, rate or extent of RNA biosynthetic process. NMDCO_relaxed.owl GO:2001212 biolink:NamedThing regulation of vasculogenesis Any process that modulates the frequency, rate or extent of vasculogenesis. NMDCO_relaxed.owl GO:2001213 biolink:NamedThing negative regulation of vasculogenesis Any process that stops, prevents or reduces the frequency, rate or extent of vasculogenesis. NMDCO_relaxed.owl GO:2001214 biolink:NamedThing positive regulation of vasculogenesis Any process that activates or increases the frequency, rate or extent of vasculogenesis. NMDCO_relaxed.owl GO:2001233 biolink:NamedThing regulation of apoptotic signaling pathway Any process that modulates the frequency, rate or extent of apoptotic signaling pathway. NMDCO_relaxed.owl GO:2001234 biolink:NamedThing negative regulation of apoptotic signaling pathway Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic signaling pathway. NMDCO_relaxed.owl GO:2001235 biolink:NamedThing positive regulation of apoptotic signaling pathway Any process that activates or increases the frequency, rate or extent of apoptotic signaling pathway. NMDCO_relaxed.owl GO:2001251 biolink:NamedThing negative regulation of chromosome organization Any process that stops, prevents or reduces the frequency, rate or extent of chromosome organization. NMDCO_relaxed.owl GO:2001252 biolink:NamedThing positive regulation of chromosome organization Any process that activates or increases the frequency, rate or extent of chromosome organization. NMDCO_relaxed.owl GO:0001569 biolink:NamedThing branching involved in blood vessel morphogenesis The process of coordinated growth and sprouting of blood vessels giving rise to the organized vascular system. NMDCO_relaxed.owl GO:0048754 biolink:NamedThing branching morphogenesis of an epithelial tube The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder. NMDCO_relaxed.owl GO:0060441 biolink:NamedThing epithelial tube branching involved in lung morphogenesis The process in which a highly ordered sequence of patterning events generates the branched epithelial tubes of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units. NMDCO_relaxed.owl GO:0001570 biolink:NamedThing vasculogenesis The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes. NMDCO_relaxed.owl GO:0001751 biolink:NamedThing compound eye photoreceptor cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of an eye photoreceptor cell. NMDCO_relaxed.owl GO:0001754 biolink:NamedThing eye photoreceptor cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell, as found in the eye, the primary visual organ of most organisms. NMDCO_relaxed.owl GO:0001826 biolink:NamedThing inner cell mass cell differentiation The process in which a relatively unspecialized cell acquires specialized features of an inner cell mass cell. NMDCO_relaxed.owl GO:0001829 biolink:NamedThing trophectodermal cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of a trophectoderm cell. NMDCO_relaxed.owl GO:0001837 biolink:NamedThing epithelial to mesenchymal transition A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. NMDCO_relaxed.owl GO:0002062 biolink:NamedThing chondrocyte differentiation The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage. NMDCO_relaxed.owl GO:0002065 biolink:NamedThing columnar/cuboidal epithelial cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. NMDCO_relaxed.owl GO:0002067 biolink:NamedThing glandular epithelial cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a glandular epithelial cell. A glandular epithelial cell is a columnar/cuboidal epithelial cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland. NMDCO_relaxed.owl GO:0002318 biolink:NamedThing myeloid progenitor cell differentiation The process in which a precursor cell type acquires the specialized features of a myeloid progenitor cell. Myeloid progenitor cells include progenitor cells for any of the myeloid lineages. NMDCO_relaxed.owl GO:0002521 biolink:NamedThing leukocyte differentiation The process in which a relatively unspecialized hemopoietic precursor cell acquires the specialized features of a leukocyte. A leukocyte is an achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue. NMDCO_relaxed.owl GO:0002573 biolink:NamedThing myeloid leukocyte differentiation The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage. NMDCO_relaxed.owl GO:0003168 biolink:NamedThing Purkinje myocyte differentiation The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a Purkinje myocyte (also known as cardiac Purkinje fiber cell). These cells are specialized cardiomyocytes that receive signals from the bundle of His and innervate the ventricular cardiac muscle. NMDCO_relaxed.owl GO:0003292 biolink:NamedThing cardiac septum cell differentiation The process in which an endocardial cushion cell becomes a cell of a cardiac septum. NMDCO_relaxed.owl GO:0003309 biolink:NamedThing type B pancreatic cell differentiation The process in which relatively unspecialized cells acquire specialized structural and/or functional features of a type B pancreatic cell. A type B pancreatic cell is a cell located towards center of the islets of Langerhans that secretes insulin. NMDCO_relaxed.owl GO:0003310 biolink:NamedThing pancreatic A cell differentiation The process in which relatively unspecialized cells acquire specialized structural and functional features of a pancreatic A cell. A pancreatic A cell is a cell in the pancreas that secretes glucagon. NMDCO_relaxed.owl GO:0003311 biolink:NamedThing pancreatic D cell differentiation The process in which relatively unspecialized cells acquire specialized structural and functional features that characterize a pancreatic delta cell. A delta cell is a cell of the pancreas that produces somatostatin. NMDCO_relaxed.owl GO:0003312 biolink:NamedThing pancreatic PP cell differentiation The process in which relatively unspecialized cells acquire specialized structural and functional features of a pancreatic polypeptide-producing cell. A pancreatic polypeptide-producing cell is a cell in the pancreas that produces pancreatic polypeptide. NMDCO_relaxed.owl GO:0003348 biolink:NamedThing cardiac endothelial cell differentiation The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac endothelial cell. NMDCO_relaxed.owl GO:0003357 biolink:NamedThing noradrenergic neuron differentiation The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron, a neuron that secretes noradrenaline. NMDCO_relaxed.owl GO:0009913 biolink:NamedThing epidermal cell differentiation The process in which a relatively unspecialized cell acquires specialized features of an epidermal cell, any of the cells making up the epidermis. NMDCO_relaxed.owl GO:0010001 biolink:NamedThing glial cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of a glial cell. NMDCO_relaxed.owl GO:0010002 biolink:NamedThing cardioblast differentiation The process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. NMDCO_relaxed.owl GO:0010668 biolink:NamedThing ectodermal cell differentiation The process in which relatively unspecialized cells acquire specialized structural and/or functional features of an ectodermal cell. Differentiation includes the processes involved in commitment of a cell to a specific fate. NMDCO_relaxed.owl GO:0014016 biolink:NamedThing neuroblast differentiation The process in which a relatively unspecialized cell acquires specialized features of a neuroblast. There are at least four stages through which the pluripotent cells of epiblast or blastula become neuroblasts. NMDCO_relaxed.owl GO:0014033 biolink:NamedThing neural crest cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a neural crest cell. NMDCO_relaxed.owl GO:0014902 biolink:NamedThing myotube differentiation The process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. NMDCO_relaxed.owl GO:0021514 biolink:NamedThing ventral spinal cord interneuron differentiation The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of ventral spinal cord interneurons. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses. Differentiation includes the processes involved in commitment of a cell to a specific fate. NMDCO_relaxed.owl GO:0021515 biolink:NamedThing cell differentiation in spinal cord The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the spinal cord. Differentiation includes the processes involved in commitment of a cell to a specific fate. NMDCO_relaxed.owl GO:0021522 biolink:NamedThing spinal cord motor neuron differentiation The process in which neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate. NMDCO_relaxed.owl GO:0021523 biolink:NamedThing somatic motor neuron differentiation The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of somatic motor neurons. Somatic motor neurons innervate skeletal muscle targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate. NMDCO_relaxed.owl GO:0021533 biolink:NamedThing cell differentiation in hindbrain The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate. NMDCO_relaxed.owl GO:0021953 biolink:NamedThing central nervous system neuron differentiation The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system. NMDCO_relaxed.owl GO:0022008 biolink:NamedThing neurogenesis Generation of cells within the nervous system. NMDCO_relaxed.owl GO:0030182 biolink:NamedThing neuron differentiation The process in which a relatively unspecialized cell acquires specialized features of a neuron. NMDCO_relaxed.owl GO:0030855 biolink:NamedThing epithelial cell differentiation The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium. NMDCO_relaxed.owl GO:0035051 biolink:NamedThing cardiocyte differentiation The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual. NMDCO_relaxed.owl GO:0035645 biolink:NamedThing enteric smooth muscle cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell of the intestine. NMDCO_relaxed.owl GO:0035779 biolink:NamedThing angioblast cell differentiation The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an angioblast cell. Angioblasts are one of the two products formed from hemangioblast cells (the other being pluripotent hemopoietic stem cells). NMDCO_relaxed.owl GO:0035883 biolink:NamedThing enteroendocrine cell differentiation The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of an enteroendocrine cell. Enteroendocrine cells are hormonally active epithelial cells in the gut that constitute the diffuse neuroendocrine system. NMDCO_relaxed.owl GO:0035886 biolink:NamedThing vascular associated smooth muscle cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a vascular smooth muscle cell. NMDCO_relaxed.owl GO:0035887 biolink:NamedThing aortic smooth muscle cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell surrounding the aorta. NMDCO_relaxed.owl GO:0035914 biolink:NamedThing skeletal muscle cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle cell, a somatic cell located in skeletal muscle. NMDCO_relaxed.owl GO:0035987 biolink:NamedThing endodermal cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of an endoderm cell, a cell of the inner of the three germ layers of the embryo. NMDCO_relaxed.owl GO:0042670 biolink:NamedThing retinal cone cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of a retinal cone cell. NMDCO_relaxed.owl GO:0042692 biolink:NamedThing muscle cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a muscle cell. NMDCO_relaxed.owl GO:0043353 biolink:NamedThing enucleate erythrocyte differentiation The process in which a myeloid precursor cell acquires specialized features of an erythrocyte without a nucleus. An example of this process is found in Mus musculus. NMDCO_relaxed.owl GO:0043363 biolink:NamedThing nucleate erythrocyte differentiation The process in which a myeloid precursor cell acquires specializes features of an erythrocyte with a nucleus, as found in non-mammalian vertebrates such as birds. NMDCO_relaxed.owl GO:0045444 biolink:NamedThing fat cell differentiation The process in which a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat. NMDCO_relaxed.owl GO:0045445 biolink:NamedThing myoblast differentiation The process in which a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into striated muscle fibers. NMDCO_relaxed.owl GO:0045446 biolink:NamedThing endothelial cell differentiation The process in which a mesodermal, bone marrow or neural crest cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium. NMDCO_relaxed.owl GO:0046530 biolink:NamedThing photoreceptor cell differentiation The specialization of organization of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light. An example of this process is found in Drosophila melanogaster. NMDCO_relaxed.owl GO:0048333 biolink:NamedThing mesodermal cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of a mesoderm cell. NMDCO_relaxed.owl GO:0048762 biolink:NamedThing mesenchymal cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types. NMDCO_relaxed.owl GO:0048863 biolink:NamedThing stem cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. NMDCO_relaxed.owl GO:0048934 biolink:NamedThing peripheral nervous system neuron differentiation The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system. NMDCO_relaxed.owl GO:0050931 biolink:NamedThing pigment cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of a pigmented cell, such as a melanocyte. NMDCO_relaxed.owl GO:0051145 biolink:NamedThing smooth muscle cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary. NMDCO_relaxed.owl GO:0051146 biolink:NamedThing striated muscle cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle. NMDCO_relaxed.owl GO:0055007 biolink:NamedThing cardiac muscle cell differentiation The process in which a cardiac muscle precursor cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. NMDCO_relaxed.owl GO:0060218 biolink:NamedThing hematopoietic stem cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a hematopoietic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. NMDCO_relaxed.owl GO:0060219 biolink:NamedThing camera-type eye photoreceptor cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell in a camera-type eye. NMDCO_relaxed.owl GO:0060221 biolink:NamedThing retinal rod cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of a retinal rod cell. NMDCO_relaxed.owl GO:0060231 biolink:NamedThing mesenchymal to epithelial transition A transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell. NMDCO_relaxed.owl GO:0060379 biolink:NamedThing cardiac muscle cell myoblast differentiation The process in which a relatively unspecialized cell acquires specialized features of a cardiac myoblast. A cardiac myoblast is a precursor cell that has been committed to a cardiac muscle cell fate but retains the ability to divide and proliferate throughout life. NMDCO_relaxed.owl GO:0060479 biolink:NamedThing lung cell differentiation The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features of a mature cell found in the lung. Differentiation includes the processes involved in commitment of a cell to a specific fate. NMDCO_relaxed.owl GO:0060487 biolink:NamedThing lung epithelial cell differentiation The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell that contributes to the epithelium of the lung. NMDCO_relaxed.owl GO:0060563 biolink:NamedThing neuroepithelial cell differentiation The process in which epiblast cells acquire specialized features of neuroepithelial cells. NMDCO_relaxed.owl GO:0060575 biolink:NamedThing intestinal epithelial cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell of the intestine. NMDCO_relaxed.owl GO:0060591 biolink:NamedThing chondroblast differentiation The process in which a mesenchymal cell, acquires specialized structural and/or functional features of a chondroblast. Differentiation includes the processes involved in commitment of a cell to a chondroblast fate. A chondroblast is a precursor cell to chondrocytes. NMDCO_relaxed.owl GO:0060837 biolink:NamedThing blood vessel endothelial cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell, a thin flattened cell that lines the inside surfaces of blood vessels. NMDCO_relaxed.owl GO:0060842 biolink:NamedThing arterial endothelial cell differentiation The process in which a relatively unspecialized endothelial cell acquires specialized features of an arterial endothelial cell, a thin flattened cell that lines the inside surfaces of arteries. NMDCO_relaxed.owl GO:0060843 biolink:NamedThing venous endothelial cell differentiation The process in which a relatively unspecialized endothelial cell acquires specialized features of a venous endothelial cell, a thin flattened cell that lines the inside surfaces of veins. NMDCO_relaxed.owl GO:0060920 biolink:NamedThing cardiac pacemaker cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a pacemaker cell. Pacemaker cells are specialized cardiomyocytes that are responsible for regulating the timing of heart contractions. NMDCO_relaxed.owl GO:0060921 biolink:NamedThing sinoatrial node cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a sinoatrial (SA) node cell. SA node cells are pacemaker cells that are found in the sinoatrial node. NMDCO_relaxed.owl GO:0060922 biolink:NamedThing atrioventricular node cell differentiation The process in which a relatively unspecialized cell acquires specialized features of an atrioventricular (AV) node cell. AV node cells are pacemaker cells that are found in the atrioventricular node. NMDCO_relaxed.owl GO:0060932 biolink:NamedThing His-Purkinje system cell differentiation The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the His-Purkinje system. These cells form the fibers regulate cardiac muscle contraction in the ventricles. NMDCO_relaxed.owl GO:0060935 biolink:NamedThing cardiac fibroblast cell differentiation The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules. NMDCO_relaxed.owl GO:0060945 biolink:NamedThing cardiac neuron differentiation The process in which a relatively unspecialized cell acquires specialized features of a neuron of the heart. NMDCO_relaxed.owl GO:0060946 biolink:NamedThing cardiac blood vessel endothelial cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell of the heart. Blood vessel endothelial cells are thin flattened cells that line the inside surfaces of blood vessels. NMDCO_relaxed.owl GO:0060950 biolink:NamedThing cardiac glial cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the heart. NMDCO_relaxed.owl GO:0060956 biolink:NamedThing endocardial cell differentiation The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart. The endocardium is the innermost layer of tissue of the heart, and lines the heart chambers. NMDCO_relaxed.owl GO:0061017 biolink:NamedThing hepatoblast differentiation The process in which a relatively unspecialized cell acquires specialized features of a hepatoblast. A hepatoblast is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into hepatocytes and cholangiocytes. NMDCO_relaxed.owl GO:0061100 biolink:NamedThing lung neuroendocrine cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the lung epithelium. NMDCO_relaxed.owl GO:0061101 biolink:NamedThing neuroendocrine cell differentiation The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a neuroendocrine cell. A neuroendocrine cell is a cell that receives input form a neuron which controls the secretion of an endocrine substance. NMDCO_relaxed.owl GO:0061102 biolink:NamedThing stomach neuroendocrine cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the stomach epithelium. NMDCO_relaxed.owl GO:0061140 biolink:NamedThing lung secretory cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a lung secretory cell. A lung secretory cell is a specialized epithelial cell of the lung that contains large secretory granules in its apical part. NMDCO_relaxed.owl GO:0061141 biolink:NamedThing lung ciliated cell differentiation The process in which a relatively unspecialized cell acquires specialized features of a lung ciliated cell. A lung ciliated cell is a specialized lung epithelial cell that contains cilia for moving substances released from lung secretory cells. NMDCO_relaxed.owl GO:0061453 biolink:NamedThing interstitial cell of Cajal differentiation The process in which a relatively unspecialized cell acquires specialized features of an interstitial cell of Cajal. An interstitial cell of Cajal is an intestinal neuroepithelial cell that serves as a pacemaker to trigger gut contraction. NMDCO_relaxed.owl GO:0070365 biolink:NamedThing hepatocyte differentiation The process in which a relatively unspecialized cell acquires the specialized features of a hepatocyte. A hepatocyte is specialized epithelial cell that is organized into interconnected plates called lobules, and is the main structural component of the liver. NMDCO_relaxed.owl GO:0090425 biolink:NamedThing acinar cell differentiation The epithelial cell differentiation process in which a relatively unspecialized cell acquires specialized features of an acinar cell, a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini. NMDCO_relaxed.owl GO:0098528 biolink:NamedThing skeletal muscle fiber differentiation The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle fiber cell. Skeletal muscle fiber differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual skeletal muscle fibers fuse to form bigger myotubes and start to contract. NMDCO_relaxed.owl GO:1903131 biolink:NamedThing mononuclear cell differentiation The process in which a relatively unspecialized cell acquires the specialized features of a mononuclear cell. NMDCO_relaxed.owl GO:0001578 biolink:NamedThing microtubule bundle formation A process that results in a parallel arrangement of microtubules. NMDCO_relaxed.owl GO:0007020 biolink:NamedThing microtubule nucleation The process in which tubulin alpha-beta heterodimers begin aggregation to form an oligomeric tubulin structure (a microtubule seed). Microtubule nucleation is the initiating step in the formation of a microtubule in the absence of any existing microtubules ('de novo' microtubule formation). NMDCO_relaxed.owl GO:0030951 biolink:NamedThing establishment or maintenance of microtubule cytoskeleton polarity Any cellular process that results in the specification, formation or maintenance of polarized microtubule-based cytoskeletal structures. NMDCO_relaxed.owl GO:0031109 biolink:NamedThing microtubule polymerization or depolymerization Assembly or disassembly of microtubules by the addition or removal of tubulin heterodimers from a microtubule. NMDCO_relaxed.owl GO:0001659 biolink:NamedThing temperature homeostasis A homeostatic process in which an organism modulates its internal body temperature. NMDCO_relaxed.owl GO:0048872 biolink:NamedThing homeostasis of number of cells Any biological process involved in the maintenance of the steady-state number of cells within a population of cells. NMDCO_relaxed.owl GO:0001666 biolink:NamedThing response to hypoxia Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. NMDCO_relaxed.owl GO:0006950 biolink:NamedThing response to stress Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation). NMDCO_relaxed.owl GO:0036293 biolink:NamedThing response to decreased oxygen levels Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen. NMDCO_relaxed.owl GO:0003273 biolink:NamedThing cell migration involved in endocardial cushion formation The orderly movement of a cell from one site to another that will contribute to the formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. NMDCO_relaxed.owl GO:0021535 biolink:NamedThing cell migration in hindbrain The orderly movement of a cell that will reside in the hindbrain. NMDCO_relaxed.owl GO:0022035 biolink:NamedThing rhombomere cell migration The movement of a cell within a rhombomere. This process is known to occur as an early step in the generation of anatomical structure from a rhombomere. NMDCO_relaxed.owl GO:0035441 biolink:NamedThing cell migration involved in vasculogenesis The orderly movement of a cell from one site to another that will contribute to the differentiation of an endothelial cell that will form de novo blood vessels and tubes. NMDCO_relaxed.owl GO:0042074 biolink:NamedThing cell migration involved in gastrulation The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression). NMDCO_relaxed.owl GO:0060973 biolink:NamedThing cell migration involved in heart development The orderly movement of a cell from one site to another that will contribute to the progression of the heart over time, from its initial formation, to the mature organ. NMDCO_relaxed.owl GO:0060974 biolink:NamedThing cell migration involved in heart formation The orderly movement of a cell from one site to another that contribute to the formation of the heart. The initial heart structure is made up of mesoderm-derived heart progenitor cells and neural crest-derived cells. NMDCO_relaxed.owl GO:0060980 biolink:NamedThing cell migration involved in coronary vasculogenesis The orderly movement of a cell from one site to another that will contribute to the differentiation of an endothelial cell that will form the blood vessels of the heart. NMDCO_relaxed.owl GO:0060981 biolink:NamedThing cell migration involved in coronary angiogenesis The orderly movement of a cell from one site to another that will contribute to the formation of new blood vessels in the heart from pre-existing blood vessels. NMDCO_relaxed.owl GO:0001674 biolink:NamedThing female germ cell nucleus The nucleus of the female germ cell, a reproductive cell in females. NMDCO_relaxed.owl GO:0043073 biolink:NamedThing germ cell nucleus The nucleus of a germ cell, a reproductive cell in multicellular organisms. NMDCO_relaxed.owl GO:0001677 biolink:NamedThing formation of translation initiation ternary complex Formation of a complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator). NMDCO_relaxed.owl GO:0014866 biolink:NamedThing skeletal myofibril assembly The process whose specific outcome is the progression of the skeletal myofibril over time, from its formation to the mature structure. A skeletal myofibril is a myofibril specific to skeletal muscle cells. NMDCO_relaxed.owl GO:0022618 biolink:NamedThing protein-RNA complex assembly The aggregation, arrangement and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex. NMDCO_relaxed.owl GO:0030031 biolink:NamedThing cell projection assembly Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon. NMDCO_relaxed.owl GO:0030033 biolink:NamedThing microvillus assembly Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell. NMDCO_relaxed.owl GO:0030239 biolink:NamedThing myofibril assembly Formation of myofibrils, the repeating units of striated muscle. NMDCO_relaxed.owl GO:0032060 biolink:NamedThing bleb assembly The assembly of a bleb, a cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Plasma membrane blebbing occurs during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses. NMDCO_relaxed.owl GO:0034329 biolink:NamedThing cell junction assembly A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a cell junction. NMDCO_relaxed.owl GO:0035082 biolink:NamedThing axoneme assembly The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements. NMDCO_relaxed.owl GO:0042255 biolink:NamedThing ribosome assembly The aggregation, arrangement and bonding together of the mature ribosome and of its subunits. NMDCO_relaxed.owl GO:0046785 biolink:NamedThing microtubule polymerization The addition of tubulin heterodimers to one or both ends of a microtubule. NMDCO_relaxed.owl GO:0048251 biolink:NamedThing elastic fiber assembly Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching. NMDCO_relaxed.owl GO:0051017 biolink:NamedThing actin filament bundle assembly The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness. NMDCO_relaxed.owl GO:0055003 biolink:NamedThing cardiac myofibril assembly The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells. NMDCO_relaxed.owl GO:0060271 biolink:NamedThing cilium assembly The assembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole. NMDCO_relaxed.owl GO:0065003 biolink:NamedThing protein-containing complex assembly The aggregation, arrangement and bonding together of a set of macromolecules to form a protein-containing complex. NMDCO_relaxed.owl GO:0065004 biolink:NamedThing protein-DNA complex assembly The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex. NMDCO_relaxed.owl GO:0070831 biolink:NamedThing basement membrane assembly The aggregation, arrangement and bonding together of a set of components to form a basement membrane, a part of the extracellular region that consists of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. NMDCO_relaxed.owl GO:0070925 biolink:NamedThing organelle assembly The aggregation, arrangement and bonding together of a set of components to form an organelle. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. NMDCO_relaxed.owl GO:0071709 biolink:NamedThing membrane assembly The aggregation, arrangement and bonding together of a set of components to form a membrane. NMDCO_relaxed.owl GO:0085029 biolink:NamedThing extracellular matrix assembly The aggregation, arrangement and bonding together of the extracellular matrix. NMDCO_relaxed.owl GO:0090168 biolink:NamedThing Golgi reassembly The reformation of the Golgi following its breakdown and partitioning contributing to Golgi inheritance. NMDCO_relaxed.owl GO:0099054 biolink:NamedThing presynapse assembly The aggregation, arrangement and bonding together of a set of components to form a presynapse. NMDCO_relaxed.owl GO:0099068 biolink:NamedThing postsynapse assembly The aggregation, arrangement and bonding together of a set of components to form a postsynapse. NMDCO_relaxed.owl GO:0120031 biolink:NamedThing plasma membrane bounded cell projection assembly Formation of a prolongation or process extending and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon. NMDCO_relaxed.owl GO:0140694 biolink:NamedThing non-membrane-bounded organelle assembly The aggregation, arrangement and bonding together of a set of components to form a non-membrane-bounded organelle. NMDCO_relaxed.owl GO:1905349 biolink:NamedThing ciliary transition zone assembly The aggregation, arrangement and bonding together of a set of components to form a ciliary transition zone. NMDCO_relaxed.owl GO:0001696 biolink:NamedThing gastric acid secretion The regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion. NMDCO_relaxed.owl GO:0022600 biolink:NamedThing digestive system process A physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. NMDCO_relaxed.owl GO:0030421 biolink:NamedThing defecation The expulsion of feces from the rectum. NMDCO_relaxed.owl GO:0043133 biolink:NamedThing hindgut contraction A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the hindgut. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The hindgut is the posterior part of the alimentary canal, including the rectum, and the large intestine. NMDCO_relaxed.owl GO:0071626 biolink:NamedThing mastication The process of biting and mashing food with the teeth prior to swallowing. NMDCO_relaxed.owl GO:0046717 biolink:NamedThing acid secretion The controlled release of acid by a cell or a tissue. NMDCO_relaxed.owl GO:0032782 biolink:NamedThing bile acid secretion The regulated release of bile acid, composed of any of a group of steroid carboxylic acids occurring in bile, by a cell or a tissue. NMDCO_relaxed.owl GO:0001700 biolink:NamedThing embryonic development via the syncytial blastoderm The process whose specific outcome is the progression of the embryo over time, from zygote formation through syncytial blastoderm to the hatching of the first instar larva. An example of this process is found in Drosophila melanogaster. NMDCO_relaxed.owl GO:0009792 biolink:NamedThing embryo development ending in birth or egg hatching The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell. NMDCO_relaxed.owl GO:0043009 biolink:NamedThing chordate embryonic development The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching. NMDCO_relaxed.owl GO:0001701 biolink:NamedThing in utero embryonic development The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus. NMDCO_relaxed.owl GO:0048048 biolink:NamedThing embryonic eye morphogenesis The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. NMDCO_relaxed.owl GO:0009952 biolink:NamedThing anterior/posterior pattern specification The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism. NMDCO_relaxed.owl GO:0021903 biolink:NamedThing rostrocaudal neural tube patterning The process in which the neural tube is divided into specific regions along the rostrocaudal axis. NMDCO_relaxed.owl GO:0021999 biolink:NamedThing neural plate anterior/posterior regionalization The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the neural plate. NMDCO_relaxed.owl GO:0035282 biolink:NamedThing segmentation The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis. NMDCO_relaxed.owl GO:0001776 biolink:NamedThing leukocyte homeostasis The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus. NMDCO_relaxed.owl GO:0002252 biolink:NamedThing immune effector process Any process of the immune system that executes a component of an immune response. An effector immune process takes place after its activation. NMDCO_relaxed.owl GO:0002262 biolink:NamedThing myeloid cell homeostasis The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus. NMDCO_relaxed.owl GO:0002443 biolink:NamedThing leukocyte mediated immunity Any process involved in the carrying out of an immune response by a leukocyte. NMDCO_relaxed.owl GO:0002444 biolink:NamedThing myeloid leukocyte mediated immunity Any process involved in the carrying out of an immune response by a myeloid leukocyte. NMDCO_relaxed.owl GO:0006955 biolink:NamedThing immune response Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. NMDCO_relaxed.owl GO:0034101 biolink:NamedThing erythrocyte homeostasis Any process of regulating the production and elimination of erythrocytes within an organism. NMDCO_relaxed.owl GO:0036333 biolink:NamedThing hepatocyte homeostasis Any biological process involved in the maintenance of the steady-state number of hepatocytes within a population of cells. Hepatocytes are specialized epithelial cells of the liver that are organized into interconnected plates called lobules. NMDCO_relaxed.owl GO:0036334 biolink:NamedThing epidermal stem cell homeostasis Any biological process involved in the maintenance of the steady-state number of epidermal stem cells within a population of cells. NMDCO_relaxed.owl GO:0061484 biolink:NamedThing hematopoietic stem cell homeostasis Any biological process involved in the maintenance of the steady-state number of hematopoietic stem cells within a population of cells. NMDCO_relaxed.owl GO:0006837 biolink:NamedThing serotonin transport The directed movement of serotonin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems. NMDCO_relaxed.owl GO:0023061 biolink:NamedThing signal release The process in which a signal is secreted or discharged into the extracellular medium from a cellular source. NMDCO_relaxed.owl GO:0061526 biolink:NamedThing acetylcholine secretion The regulated release of acetylcholine by a cell. NMDCO_relaxed.owl GO:0099643 biolink:NamedThing signal release from synapse Any signal release from a synapse. NMDCO_relaxed.owl GO:0046903 biolink:NamedThing secretion The controlled release of a substance by a cell or a tissue. NMDCO_relaxed.owl GO:0002790 biolink:NamedThing peptide secretion The controlled release of a peptide from a cell or a tissue. NMDCO_relaxed.owl GO:0007589 biolink:NamedThing body fluid secretion The controlled release of a fluid by a cell or tissue in an animal. NMDCO_relaxed.owl GO:0050432 biolink:NamedThing catecholamine secretion The regulated release of catecholamines by a cell. The catecholamines are a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. NMDCO_relaxed.owl GO:0048667 biolink:NamedThing cell morphogenesis involved in neuron differentiation The process in which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron. NMDCO_relaxed.owl GO:0003152 biolink:NamedThing morphogenesis of an epithelial fold involved in embryonic heart tube formation The morphogenetic process in which an epithelial sheet bends along a linear axis, contributing to embryonic heart tube formation. NMDCO_relaxed.owl GO:0007369 biolink:NamedThing gastrulation A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm. NMDCO_relaxed.owl GO:0016331 biolink:NamedThing morphogenesis of embryonic epithelium The process in which the anatomical structures of embryonic epithelia are generated and organized. NMDCO_relaxed.owl GO:0048562 biolink:NamedThing embryonic organ morphogenesis Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. NMDCO_relaxed.owl GO:0003248 biolink:NamedThing heart capillary growth The increase in heart capillaries that accompanies physiological hypertrophy of cardiac muscle. NMDCO_relaxed.owl GO:0003416 biolink:NamedThing endochondral bone growth The increase in size or mass of an endochondral bone that contributes to the shaping of the bone. NMDCO_relaxed.owl GO:0048630 biolink:NamedThing skeletal muscle tissue growth The increase in size or mass of a skeletal muscle. This may be due to a change in the fiber number or size. NMDCO_relaxed.owl GO:0055017 biolink:NamedThing cardiac muscle tissue growth The increase in size or mass of a cardiac muscle, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another. NMDCO_relaxed.owl GO:0060419 biolink:NamedThing heart growth The increase in size or mass of the heart. NMDCO_relaxed.owl GO:0060437 biolink:NamedThing lung growth The increase in size or mass of a lung. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax. NMDCO_relaxed.owl GO:0060560 biolink:NamedThing developmental growth involved in morphogenesis The increase in size or mass of an anatomical structure that contributes to the structure attaining its shape. NMDCO_relaxed.owl GO:0098867 biolink:NamedThing intramembranous bone growth The increase in size or mass of an intramembranous bone that contributes to the shaping of the bone. NMDCO_relaxed.owl GO:0098868 biolink:NamedThing bone growth The increase in size or mass of a bone that contributes to the shaping of that bone. NMDCO_relaxed.owl GO:0001833 biolink:NamedThing inner cell mass cell proliferation The proliferation of cells in the inner cell mass. NMDCO_relaxed.owl GO:0008283 biolink:NamedThing cell population proliferation The multiplication or reproduction of cells, resulting in the expansion of a cell population. NMDCO_relaxed.owl GO:0001834 biolink:NamedThing trophectodermal cell proliferation The proliferation of cells in the trophectoderm. NMDCO_relaxed.owl GO:0001935 biolink:NamedThing endothelial cell proliferation The multiplication or reproduction of endothelial cells, resulting in the expansion of a cell population. Endothelial cells are thin flattened cells which line the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium. NMDCO_relaxed.owl GO:0007405 biolink:NamedThing neuroblast proliferation The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron. NMDCO_relaxed.owl GO:0010463 biolink:NamedThing mesenchymal cell proliferation The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. NMDCO_relaxed.owl GO:0014009 biolink:NamedThing glial cell proliferation The multiplication or reproduction of glial cells by cell division, resulting in the expansion of their population. Glial cells exist throughout the nervous system, and include Schwann cells, astrocytes, and oligodendrocytes among others. NMDCO_relaxed.owl GO:0014855 biolink:NamedThing striated muscle cell proliferation The multiplication or reproduction of striated muscle cells, resulting in the expansion of a cell population. Striated muscles contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. NMDCO_relaxed.owl GO:0014856 biolink:NamedThing skeletal muscle cell proliferation The multiplication or reproduction of skeletal muscle cells, resulting in the expansion of a cell population. NMDCO_relaxed.owl GO:0021534 biolink:NamedThing cell proliferation in hindbrain The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain. NMDCO_relaxed.owl GO:0032943 biolink:NamedThing mononuclear cell proliferation The expansion of a mononuclear cell population by cell division. A mononuclear cell is a leukocyte with a single non-segmented nucleus in the mature form. NMDCO_relaxed.owl GO:0033002 biolink:NamedThing muscle cell proliferation The expansion of a muscle cell population by cell division. NMDCO_relaxed.owl GO:0033278 biolink:NamedThing cell proliferation in midbrain The multiplication or reproduction of cells, resulting in the expansion of a cell population in the midbrain. NMDCO_relaxed.owl GO:0035736 biolink:NamedThing cell proliferation involved in compound eye morphogenesis The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to compound eye morphogenesis. NMDCO_relaxed.owl GO:0044342 biolink:NamedThing type B pancreatic cell proliferation The multiplication or reproduction of pancreatic B cells, resulting in the expansion of an pancreatic B cell population. Pancreatic B cell are cells of the pancreas that secrete insulin. NMDCO_relaxed.owl GO:0048144 biolink:NamedThing fibroblast proliferation The multiplication or reproduction of fibroblast cells, resulting in the expansion of the fibroblast population. NMDCO_relaxed.owl GO:0048659 biolink:NamedThing smooth muscle cell proliferation The multiplication or reproduction of smooth muscle cells, resulting in the expansion of a cell population. NMDCO_relaxed.owl GO:0050673 biolink:NamedThing epithelial cell proliferation The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances. NMDCO_relaxed.owl GO:0051450 biolink:NamedThing myoblast proliferation The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. NMDCO_relaxed.owl GO:0060038 biolink:NamedThing cardiac muscle cell proliferation The expansion of a cardiac muscle cell population by cell division. NMDCO_relaxed.owl GO:0061323 biolink:NamedThing cell proliferation involved in heart morphogenesis The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the heart. NMDCO_relaxed.owl GO:0061325 biolink:NamedThing cell proliferation involved in outflow tract morphogenesis The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the outflow tract. NMDCO_relaxed.owl GO:0061351 biolink:NamedThing neural precursor cell proliferation The multiplication or reproduction of neural precursor cells, resulting in the expansion of a cell population. A neural precursor cell is either a nervous system stem cell or a nervous system progenitor cell. NMDCO_relaxed.owl GO:0070341 biolink:NamedThing fat cell proliferation The multiplication or reproduction of fat cells by cell division, resulting in the expansion of their population. A fat cell is an animal connective tissue cell specialized for the synthesis and storage of fat. NMDCO_relaxed.owl GO:0070661 biolink:NamedThing leukocyte proliferation The expansion of a leukocyte population by cell division. NMDCO_relaxed.owl GO:0071425 biolink:NamedThing hematopoietic stem cell proliferation The expansion of a hematopoietic stem cell population by cell division. A hematopoietic stem cell is a stem cell from which all cells of the lymphoid and myeloid lineages develop. NMDCO_relaxed.owl GO:0072089 biolink:NamedThing stem cell proliferation The multiplication or reproduction of stem cells, resulting in the expansion of a stem cell population. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. NMDCO_relaxed.owl GO:0101023 biolink:NamedThing vascular endothelial cell proliferation The multiplication or reproduction of blood vessel endothelial cells, resulting in the expansion of a cell population. NMDCO_relaxed.owl GO:0110021 biolink:NamedThing cardiac muscle myoblast proliferation The multiplication or reproduction of cardiac muscle myoblasts, resulting in the expansion of a cardiac muscle myoblast cell population. A cardiac myoblast is a precursor cell that has been committed to a cardiac muscle cell fate but retains the ability to divide and proliferate throughout life. NMDCO_relaxed.owl GO:1905315 biolink:NamedThing cell proliferation involved in endocardial cushion morphogenesis Any cell proliferation that is involved in endocardial cushion morphogenesis. NMDCO_relaxed.owl GO:1990705 biolink:NamedThing cholangiocyte proliferation The multiplication or reproduction of cholangiocytes, resulting in the expansion of the cholangiocyte population. A cholangiocyte is an epithelial cell that is part of the bile duct. Cholangiocytes contribute to bile secretion via net release of bicarbonate and water. NMDCO_relaxed.owl GO:1990863 biolink:NamedThing acinar cell proliferation The multiplication or reproduction of acinar cells, resulting in the expansion of a cell population. An acinar cell is a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini (singular acinus). NMDCO_relaxed.owl GO:1990874 biolink:NamedThing vascular associated smooth muscle cell proliferation The multiplication or reproduction of vascular smooth muscle cells, resulting in the expansion of a cell population. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels. NMDCO_relaxed.owl GO:0060915 biolink:NamedThing mesenchymal cell differentiation involved in lung development The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell of the lung. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types. NMDCO_relaxed.owl GO:1901706 biolink:NamedThing mesenchymal cell differentiation involved in bone development The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of bone as it progresses from its formation to the mature state. NMDCO_relaxed.owl GO:2001012 biolink:NamedThing mesenchymal cell differentiation involved in renal system development The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the renal system as it progresses from its formation to the mature state. NMDCO_relaxed.owl GO:0001838 biolink:NamedThing embryonic epithelial tube formation The morphogenesis of an embryonic epithelium into a tube-shaped structure. NMDCO_relaxed.owl GO:0072175 biolink:NamedThing epithelial tube formation The developmental process pertaining to the initial formation of an epithelial tube. NMDCO_relaxed.owl GO:0120331 biolink:NamedThing endothelial tube formation The developmental process pertaining to the initial formation of an endothelial tube. NMDCO_relaxed.owl GO:0014020 biolink:NamedThing primary neural tube formation The formation of the neural tube from an epithelial cell sheet (the neuroepithelium or neural plate). In primary neurulation, the cells surrounding the neural plate direct the neural plate cells to proliferate, invaginate, and pinch off from the surface to form a hollow epithelial tube. Primary neurulation is the typical mechanism of formation of the anterior neural tube. NMDCO_relaxed.owl GO:0001878 biolink:NamedThing response to yeast Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species. NMDCO_relaxed.owl GO:0009620 biolink:NamedThing response to fungus Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus. NMDCO_relaxed.owl GO:0009416 biolink:NamedThing response to light stimulus Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light. NMDCO_relaxed.owl GO:0009605 biolink:NamedThing response to external stimulus Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus. NMDCO_relaxed.owl GO:0009607 biolink:NamedThing response to biotic stimulus Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism. NMDCO_relaxed.owl GO:0009617 biolink:NamedThing response to bacterium Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium. NMDCO_relaxed.owl GO:0009628 biolink:NamedThing response to abiotic stimulus Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (not derived from living organisms) stimulus. NMDCO_relaxed.owl GO:0009719 biolink:NamedThing response to endogenous stimulus Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism. NMDCO_relaxed.owl GO:0009743 biolink:NamedThing response to carbohydrate Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbohydrate stimulus. NMDCO_relaxed.owl GO:0009746 biolink:NamedThing response to hexose Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hexose stimulus. NMDCO_relaxed.owl GO:0009749 biolink:NamedThing response to glucose Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus. NMDCO_relaxed.owl GO:0010034 biolink:NamedThing response to acetate Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetate stimulus. NMDCO_relaxed.owl GO:0010038 biolink:NamedThing response to metal ion Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus. NMDCO_relaxed.owl GO:0010243 biolink:NamedThing response to organonitrogen compound Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organonitrogen stimulus. An organonitrogen compound is formally a compound containing at least one carbon-nitrogen bond. NMDCO_relaxed.owl GO:0014070 biolink:NamedThing response to organic cyclic compound Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic compound stimulus. NMDCO_relaxed.owl GO:0014075 biolink:NamedThing response to amine Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amine stimulus. An amine is a compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups. NMDCO_relaxed.owl GO:0014874 biolink:NamedThing response to stimulus involved in regulation of muscle adaptation Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. This occurs as part of the regulation of muscle adaptation. NMDCO_relaxed.owl GO:0033762 biolink:NamedThing response to glucagon Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucagon stimulus. NMDCO_relaxed.owl GO:0033993 biolink:NamedThing response to lipid Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus. NMDCO_relaxed.owl GO:0034284 biolink:NamedThing response to monosaccharide Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosaccharide stimulus. NMDCO_relaxed.owl GO:0043200 biolink:NamedThing response to amino acid Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups. NMDCO_relaxed.owl GO:0043279 biolink:NamedThing response to alkaloid Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active. NMDCO_relaxed.owl GO:0043434 biolink:NamedThing response to peptide hormone Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals. NMDCO_relaxed.owl GO:0043500 biolink:NamedThing muscle adaptation A process in which muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. NMDCO_relaxed.owl GO:0046681 biolink:NamedThing response to carbamate Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbamate stimulus. Carbamates are a group of insecticides and parasiticides that act by inhibiting cholinesterase. NMDCO_relaxed.owl GO:0048545 biolink:NamedThing response to steroid hormone Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus. NMDCO_relaxed.owl GO:0051606 biolink:NamedThing detection of stimulus The series of events in which a stimulus is received by a cell or organism and converted into a molecular signal. NMDCO_relaxed.owl GO:0051707 biolink:NamedThing response to other organism Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism. NMDCO_relaxed.owl GO:0051716 biolink:NamedThing cellular response to stimulus Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus by a cell and ends with a change in state or activity or the cell. NMDCO_relaxed.owl GO:0060359 biolink:NamedThing response to ammonium ion Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ammonium stimulus. NMDCO_relaxed.owl GO:0071867 biolink:NamedThing response to monoamine Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monoamine stimulus. A monoamine is any of a group of molecular messengers that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan. NMDCO_relaxed.owl GO:0071869 biolink:NamedThing response to catecholamine Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catecholamine stimulus. A catecholamine is any of a group of biogenic amines that includes 4-(2-aminoethyl)pyrocatechol [4-(2-aminoethyl)benzene-1,2-diol] and derivatives formed by substitution. NMDCO_relaxed.owl GO:0071873 biolink:NamedThing response to norepinephrine Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a norepinephrine stimulus. Norepinephrine is a catecholamine that has the formula C8H11NO3; it acts as a hormone, and as a neurotransmitter in most of the sympathetic nervous system. NMDCO_relaxed.owl GO:1901652 biolink:NamedThing response to peptide Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide stimulus. NMDCO_relaxed.owl GO:1901654 biolink:NamedThing response to ketone A response that results in a state of tolerance to ketone. NMDCO_relaxed.owl GO:1903412 biolink:NamedThing response to bile acid Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bile acid stimulus. NMDCO_relaxed.owl GO:1904014 biolink:NamedThing response to serotonin Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a serotonin stimulus. NMDCO_relaxed.owl GO:1904587 biolink:NamedThing response to glycoprotein Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycoprotein stimulus. NMDCO_relaxed.owl GO:1905144 biolink:NamedThing response to acetylcholine Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetylcholine stimulus. NMDCO_relaxed.owl GO:0001885 biolink:NamedThing endothelial cell development The progression of an endothelial cell over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0002064 biolink:NamedThing epithelial cell development The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface. NMDCO_relaxed.owl GO:0002066 biolink:NamedThing columnar/cuboidal epithelial cell development The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell over time, from its formation to the mature structure. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube. NMDCO_relaxed.owl GO:0002063 biolink:NamedThing chondrocyte development The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate. NMDCO_relaxed.owl GO:0002068 biolink:NamedThing glandular epithelial cell development The process whose specific outcome is the progression of a glandular epithelial cell over time, from its formation to the mature structure. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland. NMDCO_relaxed.owl GO:0003322 biolink:NamedThing pancreatic A cell development The process whose specific outcome is the progression of a pancreatic A cell over time, from its formation to the mature structure. A pancreatic A cell is a cell in the pancreas that secretes glucagon. NMDCO_relaxed.owl GO:0003323 biolink:NamedThing type B pancreatic cell development The process whose specific outcome is the progression of a type B pancreatic cell over time, from its formation to the mature structure. A type B pancreatic cell is a cell located towards center of the islets of Langerhans that secretes insulin. NMDCO_relaxed.owl GO:0003324 biolink:NamedThing pancreatic D cell development The process whose specific outcome is the progression of a pancreatic delta cell over time, from its formation to the mature structure. A delta cell is a cell of the pancreas that produces somatostatin. NMDCO_relaxed.owl GO:0003358 biolink:NamedThing noradrenergic neuron development The process whose specific outcome is the progression of a noradrenergic neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl GO:0014019 biolink:NamedThing neuroblast development The process aimed at the progression of a neuroblast over time, from initial commitment of the cell to a specific state, to the mature neuroblast. It does not include processes where the neuroblast turns into a glial cell or a neuron. NMDCO_relaxed.owl GO:0014031 biolink:NamedThing mesenchymal cell development The process aimed at the progression of a mesenchymal cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl GO:0014032 biolink:NamedThing neural crest cell development The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl GO:0014904 biolink:NamedThing myotube cell development The process aimed at the progression of a myotube cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse. NMDCO_relaxed.owl GO:0021782 biolink:NamedThing glial cell development The process aimed at the progression of a glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl GO:0030097 biolink:NamedThing hemopoiesis The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates. NMDCO_relaxed.owl GO:0031128 biolink:NamedThing developmental induction A developmental process involving two tissues in which one tissue (the inducer) produces a signal that directs cell fate commitment of cells in the second tissue (the responder). NMDCO_relaxed.owl GO:0042461 biolink:NamedThing photoreceptor cell development Development of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light. NMDCO_relaxed.owl GO:0042462 biolink:NamedThing eye photoreceptor cell development Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve. NMDCO_relaxed.owl GO:0046548 biolink:NamedThing retinal rod cell development Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light. NMDCO_relaxed.owl GO:0046549 biolink:NamedThing retinal cone cell development Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision. NMDCO_relaxed.owl GO:0048627 biolink:NamedThing myoblast development The process whose specific outcome is the progression of the myoblast over time, from its formation to the mature structure. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. NMDCO_relaxed.owl GO:0048666 biolink:NamedThing neuron development The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl GO:0048821 biolink:NamedThing erythrocyte development The process whose specific outcome is the progression of an erythrocyte over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0048822 biolink:NamedThing enucleate erythrocyte development The process aimed at the progression of an enucleate erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl GO:0048823 biolink:NamedThing nucleate erythrocyte development The process aimed at the progression of a nucleate erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl GO:0048864 biolink:NamedThing stem cell development The process whose specific outcome is the progression of the stem cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to its specific fate. NMDCO_relaxed.owl GO:0048869 biolink:NamedThing cellular developmental process A biological process whose specific outcome is the progression of a cell over time from an initial condition to a later condition. NMDCO_relaxed.owl GO:0055001 biolink:NamedThing muscle cell development The process whose specific outcome is the progression of a muscle cell over time, from its formation to the mature structure. Muscle cell development does not include the steps involved in committing an unspecified cell to the muscle cell fate. NMDCO_relaxed.owl GO:0055002 biolink:NamedThing striated muscle cell development The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. NMDCO_relaxed.owl GO:0055006 biolink:NamedThing cardiac cell development The process whose specific outcome is the progression of a cardiac cell over time, from its formation to the mature state. A cardiac cell is a cell that will form part of the cardiac organ of an individual. NMDCO_relaxed.owl GO:0055013 biolink:NamedThing cardiac muscle cell development The process whose specific outcome is the progression of a cardiac muscle cell over time, from its formation to the mature state. NMDCO_relaxed.owl GO:0070285 biolink:NamedThing pigment cell development The process whose specific outcome is the progression of a pigment cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a pigment cell fate. NMDCO_relaxed.owl GO:0098751 biolink:NamedThing bone cell development The process whose specific outcome is the progression of a bone cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. NMDCO_relaxed.owl GO:0003381 biolink:NamedThing epithelial cell morphogenesis involved in gastrulation The change in form that occurs when an epithelial cell progresses from it initial formation to its mature state, contributing to the process of gastrulation. NMDCO_relaxed.owl GO:0060502 biolink:NamedThing epithelial cell proliferation involved in lung morphogenesis The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the shaping of the lung. NMDCO_relaxed.owl GO:0072575 biolink:NamedThing epithelial cell proliferation involved in liver morphogenesis The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the shaping of the liver. NMDCO_relaxed.owl GO:0061553 biolink:NamedThing ganglion maturation A developmental process, independent of morphogenetic (shape) change, that is required for ganglion to attain its fully functional state. NMDCO_relaxed.owl GO:0061557 biolink:NamedThing trigeminal ganglion maturation A developmental process, independent of morphogenetic (shape) change, that is required for a trigeminal ganglion to attain its fully functional state. NMDCO_relaxed.owl GO:0061558 biolink:NamedThing cranial ganglion maturation A developmental process, independent of morphogenetic (shape) change, that is required for a cranial ganglion to attain its fully functional state. NMDCO_relaxed.owl GO:0001957 biolink:NamedThing intramembranous ossification Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells. NMDCO_relaxed.owl GO:0036072 biolink:NamedThing direct ossification The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance, that does not require the replacement of preexisting tissues. NMDCO_relaxed.owl GO:0060415 biolink:NamedThing muscle tissue morphogenesis The process in which the anatomical structures of muscle tissue are generated and organized. Muscle tissue consists of a set of cells that are part of an organ and carry out a contractive function. NMDCO_relaxed.owl GO:0061138 biolink:NamedThing morphogenesis of a branching epithelium The process in which the anatomical structures of a branched epithelium are generated and organized. NMDCO_relaxed.owl GO:0002027 biolink:NamedThing regulation of heart rate Any process that modulates the frequency or rate of heart contraction. NMDCO_relaxed.owl GO:0061337 biolink:NamedThing cardiac conduction Transfer of an organized electrical impulse across the heart to coordinate the contraction of cardiac muscles. The process begins with generation of an action potential (in the sinoatrial node (SA) in humans) and ends with a change in the rate, frequency, or extent of the contraction of the heart muscles. NMDCO_relaxed.owl GO:0003325 biolink:NamedThing pancreatic PP cell development The process whose specific outcome is the progression of a pancreatic PP cell over time, from its formation to the mature structure. A pancreatic polypeptide-producing cell is a cell in the pancreas that produces pancreatic polypeptide. NMDCO_relaxed.owl GO:0021954 biolink:NamedThing central nervous system neuron development The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron. NMDCO_relaxed.owl GO:0048935 biolink:NamedThing peripheral nervous system neuron development The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron. NMDCO_relaxed.owl GO:0060928 biolink:NamedThing atrioventricular node cell development The process whose specific outcome is the progression of an atrioventricular (AV) node cell over time, from its formation to the mature state. NMDCO_relaxed.owl GO:0060931 biolink:NamedThing sinoatrial node cell development The process whose specific outcome is the progression of a sinoatrial (SA) node cell over time, from its formation to the mature state. SA node cells are pacemaker cells that are found in the sinoatrial node. NMDCO_relaxed.owl GO:0060933 biolink:NamedThing His-Purkinje system cell development The process whose specific outcome is the progression of a His-Purkinje cell over time, from its formation to the mature state. These cells form the fibers that regulate cardiac muscle contraction in the ventricles. NMDCO_relaxed.owl GO:0060936 biolink:NamedThing cardiac fibroblast cell development The process whose specific outcome is the progression of a cardiac fibroblast over time, from its formation to the mature state. A cardiac fibroblast is a connective tissue cell of the heart which secretes an extracellular matrix rich in collagen and other macromolecules. NMDCO_relaxed.owl GO:0060952 biolink:NamedThing cardiac glial cell development The process aimed at the progression of a cardiac glial cell over time, from its formation to the fully functional mature cell. NMDCO_relaxed.owl GO:0060959 biolink:NamedThing cardiac neuron development The process whose specific outcome is the progression of a cardiac neuron over time, from its formation to the mature state. NMDCO_relaxed.owl GO:0061515 biolink:NamedThing myeloid cell development The process whose specific outcome is the progression of a myeloid cell over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0048505 biolink:NamedThing regulation of timing of cell differentiation The process controlling the activation and/or rate at which relatively unspecialized cells acquire specialized features. Any process that modulates the rate, frequency or extent of the XXX at a consistent predetermined time point during its development. NMDCO_relaxed.owl GO:0002087 biolink:NamedThing regulation of respiratory gaseous exchange by nervous system process A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates. NMDCO_relaxed.owl GO:0050877 biolink:NamedThing nervous system process A organ system process carried out by any of the organs or tissues of neurological system. NMDCO_relaxed.owl GO:0007600 biolink:NamedThing sensory perception The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. NMDCO_relaxed.owl GO:0050890 biolink:NamedThing cognition The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory. NMDCO_relaxed.owl GO:0050905 biolink:NamedThing neuromuscular process Any process pertaining to the functions of the nervous and muscular systems of an organism. NMDCO_relaxed.owl GO:0099531 biolink:NamedThing presynaptic process involved in chemical synaptic transmission The pathway leading to secretion of a neurotransmitter from the presynapse as part of synaptic transmission. NMDCO_relaxed.owl GO:0002164 biolink:NamedThing larval development The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. The larva is the early, immature form of an that at birth or hatching is fundamentally unlike its parent and must metamorphose before assuming the adult characters. NMDCO_relaxed.owl GO:0002251 biolink:NamedThing organ or tissue specific immune response An immune response taking place in an organ or tissues such as the liver, brain, mucosa, or nervous system tissues. NMDCO_relaxed.owl GO:0002384 biolink:NamedThing hepatic immune response An immune response taking place in the liver. NMDCO_relaxed.owl GO:0014861 biolink:NamedThing regulation of skeletal muscle contraction via regulation of action potential Any process that modulates the frequency, rate or extent of skeletal muscle contraction by depolarization of muscle membrane and ionic fluxes. NMDCO_relaxed.owl GO:0023052 biolink:NamedThing signaling The entirety of a process in which information is transmitted within a biological system. This process begins with an active signal and ends when a cellular response has been triggered. NMDCO_relaxed.owl GO:0090326 biolink:NamedThing positive regulation of locomotion involved in locomotory behavior Any process that increases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement. NMDCO_relaxed.owl GO:0098900 biolink:NamedThing regulation of action potential Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. NMDCO_relaxed.owl GO:0098901 biolink:NamedThing regulation of cardiac muscle cell action potential Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. NMDCO_relaxed.owl GO:0098904 biolink:NamedThing regulation of AV node cell action potential Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrioventricular node myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. NMDCO_relaxed.owl GO:0098906 biolink:NamedThing regulation of Purkinje myocyte action potential Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a Purkinje myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. NMDCO_relaxed.owl GO:0098907 biolink:NamedThing regulation of SA node cell action potential Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an SA node cardiac myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. NMDCO_relaxed.owl GO:0098908 biolink:NamedThing regulation of neuronal action potential Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a neuron. This typically occurs via modulation of the activity or expression of voltage-gated ion channels. NMDCO_relaxed.owl GO:0015833 biolink:NamedThing peptide transport The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0003002 biolink:NamedThing regionalization The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment. NMDCO_relaxed.owl GO:0060896 biolink:NamedThing neural plate pattern specification The developmental process that results in the creation of defined areas or spaces within the neural plate to which cells respond and eventually are instructed to differentiate. NMDCO_relaxed.owl GO:0019098 biolink:NamedThing reproductive behavior The specific behavior of an organism that is associated with reproduction. NMDCO_relaxed.owl GO:0048609 biolink:NamedThing multicellular organismal reproductive process The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs. NMDCO_relaxed.owl GO:1903046 biolink:NamedThing meiotic cell cycle process A process that is part of the meiotic cell cycle. NMDCO_relaxed.owl GO:0003009 biolink:NamedThing skeletal muscle contraction A process in which force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control. NMDCO_relaxed.owl GO:0006936 biolink:NamedThing muscle contraction A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. NMDCO_relaxed.owl GO:0006939 biolink:NamedThing smooth muscle contraction A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length. NMDCO_relaxed.owl GO:0006941 biolink:NamedThing striated muscle contraction A process in which force is generated within striated muscle tissue, resulting in the shortening of the muscle. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope. NMDCO_relaxed.owl GO:0060048 biolink:NamedThing cardiac muscle contraction Muscle contraction of cardiac muscle tissue. NMDCO_relaxed.owl GO:0003012 biolink:NamedThing muscle system process A organ system process carried out at the level of a muscle. Muscle tissue is composed of contractile cells or fibers. NMDCO_relaxed.owl GO:0003013 biolink:NamedThing circulatory system process A organ system process carried out by any of the organs or tissues of the circulatory system. The circulatory system is an organ system that moves extracellular fluids to and from tissue within a multicellular organism. NMDCO_relaxed.owl GO:0003014 biolink:NamedThing renal system process A organ system process carried out by any of the organs or tissues of the renal system. The renal system maintains fluid balance, and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels; in other species, the renal system may comprise related structures (e.g., nephrocytes and malpighian tubules in Drosophila). NMDCO_relaxed.owl GO:0003016 biolink:NamedThing respiratory system process A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange. NMDCO_relaxed.owl GO:0007588 biolink:NamedThing excretion The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds. NMDCO_relaxed.owl GO:0050886 biolink:NamedThing endocrine process The process that involves the secretion of or response to endocrine hormones. An endocrine hormone is a hormone released into the circulatory system. NMDCO_relaxed.owl GO:0061007 biolink:NamedThing hepaticobiliary system process An system process carried out by any of the organs or tissues of the hepaticobiliary system. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins. NMDCO_relaxed.owl GO:0003015 biolink:NamedThing heart process A circulatory system process carried out by the heart. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. NMDCO_relaxed.owl GO:0003032 biolink:NamedThing detection of oxygen The series of events in which an oxygen stimulus is received by a cell and converted into a molecular signal. NMDCO_relaxed.owl GO:0009593 biolink:NamedThing detection of chemical stimulus The series of events in which a chemical stimulus is received by a cell and converted into a molecular signal. NMDCO_relaxed.owl GO:0050968 biolink:NamedThing detection of chemical stimulus involved in sensory perception of pain The series of events involved in the perception of pain in which a chemical stimulus is received and converted into a molecular signal. NMDCO_relaxed.owl GO:0070482 biolink:NamedThing response to oxygen levels Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of oxygen. NMDCO_relaxed.owl GO:0003096 biolink:NamedThing renal sodium ion transport The directed movement of sodium ions (Na+) by the renal system. NMDCO_relaxed.owl GO:0097254 biolink:NamedThing renal tubular secretion The elimination of substances from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine. Substances that are secreted include organic anions, ammonia, potassium and drugs. NMDCO_relaxed.owl GO:0006814 biolink:NamedThing sodium ion transport The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0035725 biolink:NamedThing sodium ion transmembrane transport A process in which a sodium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0003131 biolink:NamedThing mesodermal-endodermal cell signaling Any process that mediates the transfer of information from mesodermal cells to endodermal cells. NMDCO_relaxed.owl GO:0007267 biolink:NamedThing cell-cell signaling Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions. NMDCO_relaxed.owl GO:0003133 biolink:NamedThing endodermal-mesodermal cell signaling Any process that mediates the transfer of information from endodermal cells to mesodermal cells. NMDCO_relaxed.owl GO:0045168 biolink:NamedThing cell-cell signaling involved in cell fate commitment Signaling at long or short range between cells that results in the commitment of a cell to a certain fate. NMDCO_relaxed.owl GO:0060495 biolink:NamedThing cell-cell signaling involved in lung development Any process that mediates the transfer of information from one cell to another and contributes to the progression of the lung, from its initial state to the mature structure. NMDCO_relaxed.owl GO:0060497 biolink:NamedThing mesenchymal-endodermal cell signaling Any process that mediates the transfer of information between a mesenchymal cell and an endodermal cell. NMDCO_relaxed.owl GO:0060638 biolink:NamedThing mesenchymal-epithelial cell signaling Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted. NMDCO_relaxed.owl GO:0060684 biolink:NamedThing epithelial-mesenchymal cell signaling Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted. NMDCO_relaxed.owl GO:0086019 biolink:NamedThing cell-cell signaling involved in cardiac conduction Any process that mediates the transfer of information from one cell to another and contributes to the heart process that regulates cardiac muscle contraction; beginning with the generation of an action potential in the sinoatrial node and ending with regulation of contraction of the myocardium. NMDCO_relaxed.owl GO:0086029 biolink:NamedThing Purkinje myocyte to ventricular cardiac muscle cell signaling Any process that mediates the transfer of information from a Purkinje myocyte to a ventricular cardiac muscle cell. NMDCO_relaxed.owl GO:0099156 biolink:NamedThing cell-cell signaling via exosome Cell-cell signaling in which the ligand is carried between cells by an exosome. NMDCO_relaxed.owl GO:0099536 biolink:NamedThing synaptic signaling Cell-cell signaling to, from or within a synapse. NMDCO_relaxed.owl GO:0150098 biolink:NamedThing glial cell-neuron signaling Cell-cell signaling that mediates the transfer of information from a glial cell to a neuron. This signaling has been shown to be mediated by various molecules, depending on which glial cells release them, and in which tissues the signaling occurs, e.g. microglial cell-derived nerve growth factor (NGF) in the retina, or microglial cell-derived superoxide ions in the cerebellum. NMDCO_relaxed.owl GO:0150099 biolink:NamedThing neuron-glial cell signaling Cell-cell signaling that mediates the transfer of information from a neuron to a glial cell. This signaling has been shown to be mediated by various molecules released by different types of neurons, e.g. glutamate, gamma-amino butyric acid (GABA), noradrenaline, acetylcholine, dopamine and adenosine. NMDCO_relaxed.owl GO:0003145 biolink:NamedThing embryonic heart tube formation via epithelial folding The process that gives rise to the embryonic heart tube by the cells of the heart field along a linear axis. NMDCO_relaxed.owl GO:0003245 biolink:NamedThing cardiac muscle tissue growth involved in heart morphogenesis The developmental growth of cardiac muscle tissue that contributes to the shaping of the heart. NMDCO_relaxed.owl GO:0003275 biolink:NamedThing apoptotic process involved in outflow tract morphogenesis Any apoptotic process that contributes to the shaping of the outflow tract. The outflow tract is the portion of the heart through which blood flows into the arteries. NMDCO_relaxed.owl GO:0003278 biolink:NamedThing apoptotic process involved in heart morphogenesis Any apoptotic process that contributes to the shaping of the heart. NMDCO_relaxed.owl GO:0003277 biolink:NamedThing apoptotic process involved in endocardial cushion morphogenesis Any apoptotic process that contributes to the shaping of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves. NMDCO_relaxed.owl GO:0006915 biolink:NamedThing apoptotic process A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. NMDCO_relaxed.owl GO:0010657 biolink:NamedThing muscle cell apoptotic process A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle. NMDCO_relaxed.owl GO:0010658 biolink:NamedThing striated muscle cell apoptotic process A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a striated muscle cell and result in its death. Striated muscle cells make up striated muscle fibers which are divided by transverse bands into striations. NMDCO_relaxed.owl GO:0010659 biolink:NamedThing cardiac muscle cell apoptotic process A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a cardiac muscle cell and result in its death. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. NMDCO_relaxed.owl GO:0033028 biolink:NamedThing myeloid cell apoptotic process Any apoptotic process in a myeloid cell, a cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage. NMDCO_relaxed.owl GO:0034349 biolink:NamedThing glial cell apoptotic process Any apoptotic process in a glial cell, a non-neuronal cell of the nervous system. NMDCO_relaxed.owl GO:0034390 biolink:NamedThing smooth muscle cell apoptotic process Any apoptotic process in a smooth muscle cell. Smooth muscle consists of non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. NMDCO_relaxed.owl GO:0044346 biolink:NamedThing fibroblast apoptotic process Any apoptotic process in a fibroblast, a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. NMDCO_relaxed.owl GO:0051402 biolink:NamedThing neuron apoptotic process Any apoptotic process in a neuron, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system. NMDCO_relaxed.owl GO:0060561 biolink:NamedThing apoptotic process involved in morphogenesis Any apoptotic process that contributes to the shaping of an anatomical structure. NMDCO_relaxed.owl GO:0071887 biolink:NamedThing leukocyte apoptotic process Any apoptotic process in a leukocyte, an achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue. NMDCO_relaxed.owl GO:0072577 biolink:NamedThing endothelial cell apoptotic process Any apoptotic process in an endothelial cell. An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. NMDCO_relaxed.owl GO:0097049 biolink:NamedThing motor neuron apoptotic process Any apoptotic process in a motor neuron, an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement. NMDCO_relaxed.owl GO:0097050 biolink:NamedThing type B pancreatic cell apoptotic process Any apoptotic process in a type B pancreatic cell, a cell located towards center of the islets of Langerhans that secretes insulin. NMDCO_relaxed.owl GO:0097152 biolink:NamedThing mesenchymal cell apoptotic process Any apoptotic process in a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types. NMDCO_relaxed.owl GO:0097284 biolink:NamedThing hepatocyte apoptotic process Any apoptotic process in a hepatocyte, the main structural component of the liver. NMDCO_relaxed.owl GO:0097473 biolink:NamedThing retinal rod cell apoptotic process Any apoptotic process in a retinal rod cell, one of the two photoreceptor cell types of the vertebrate retina. NMDCO_relaxed.owl GO:0097474 biolink:NamedThing retinal cone cell apoptotic process Any apoptotic process in a retinal cone cell, one of the two photoreceptor cell types of the vertebrate retina. NMDCO_relaxed.owl GO:1902217 biolink:NamedThing erythrocyte apoptotic process Any apoptotic process in an erythrocyte. NMDCO_relaxed.owl GO:1902262 biolink:NamedThing apoptotic process involved in blood vessel morphogenesis Any apoptotic process that is involved in blood vessel morphogenesis. NMDCO_relaxed.owl GO:1902488 biolink:NamedThing cholangiocyte apoptotic process Any apoptotic process in a cholangiocyte. NMDCO_relaxed.owl GO:1902489 biolink:NamedThing hepatoblast apoptotic process Any apoptotic process in a hepatoblast. NMDCO_relaxed.owl GO:1902742 biolink:NamedThing apoptotic process involved in development Any apoptotic process that is involved in anatomical structure development. NMDCO_relaxed.owl GO:1904019 biolink:NamedThing epithelial cell apoptotic process Any apoptotic process in an epithelial cell. NMDCO_relaxed.owl GO:1904606 biolink:NamedThing fat cell apoptotic process Any apoptotic process in a fat cell. NMDCO_relaxed.owl GO:1905288 biolink:NamedThing vascular associated smooth muscle cell apoptotic process Any apoptotic process in a vascular associated smooth muscle cell. NMDCO_relaxed.owl GO:1990009 biolink:NamedThing retinal cell apoptotic process Any apoptotic process in a retinal cell. NMDCO_relaxed.owl GO:1990010 biolink:NamedThing compound eye retinal cell apoptotic process Any apoptotic process in a compound eye retinal cell. NMDCO_relaxed.owl GO:0061307 biolink:NamedThing cardiac neural crest cell differentiation involved in heart development The process in which a relatively unspecialized cell acquires specialized features of a cardiac neural crest cell that will migrate to the heart and contribute to its development. Cardiac neural crest cells are specialized cells that migrate toward the heart from the third, fourth and sixth pharyngeal arches. NMDCO_relaxed.owl GO:0003298 biolink:NamedThing physiological muscle hypertrophy The enlargement or overgrowth of all or part of a muscle organ or tissue due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development. NMDCO_relaxed.owl GO:0014896 biolink:NamedThing muscle hypertrophy The muscle system process that results in enlargement or overgrowth of all or part of a muscle organ due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development (it stops in cardiac muscle after adolescence) and can also be brought on in response to demand. In athletes cardiac and skeletal muscles undergo hypertrophy stimulated by increasing muscle activity on exercise. Smooth muscle cells in the uterus undergo hypertrophy during pregnancy. NMDCO_relaxed.owl GO:0014734 biolink:NamedThing skeletal muscle hypertrophy The enlargement or overgrowth of all or part of an organ due to an increase in size (not length) of individual muscle fibers without cell division. In the case of skeletal muscle cells this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils. NMDCO_relaxed.owl GO:0014895 biolink:NamedThing smooth muscle hypertrophy The enlargement or overgrowth of all or part of an organ due to an increase in size of its smooth muscle cells without cell division. Physiological hypertrophy is a normal process during development, and can also occur in mature structures on demand. In the uterus, smooth muscle cells undergo hypertrophy during pregnancy. NMDCO_relaxed.owl GO:0014897 biolink:NamedThing striated muscle hypertrophy The enlargement or overgrowth of all or part of an organ due to an increase in size of muscle cells without cell division. In the case of striated muscle, this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils. NMDCO_relaxed.owl GO:0003300 biolink:NamedThing cardiac muscle hypertrophy The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division. NMDCO_relaxed.owl GO:0003301 biolink:NamedThing physiological cardiac muscle hypertrophy The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division. This process contributes to the developmental growth of the heart. NMDCO_relaxed.owl GO:0003333 biolink:NamedThing amino acid transmembrane transport The process in which an amino acid is transported across a membrane. NMDCO_relaxed.owl GO:0006810 biolink:NamedThing transport The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or a transporter complex, a pore or a motor protein. NMDCO_relaxed.owl GO:0006811 biolink:NamedThing monoatomic ion transport The directed movement of a monoatomic ion into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Monatomic ions (also called simple ions) are ions consisting of exactly one atom. NMDCO_relaxed.owl GO:0006812 biolink:NamedThing monoatomic cation transport The directed movement of a monoatomic cation, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Monatomic cations (also called simple cations) are positively charged ions consisting of exactly one atom. NMDCO_relaxed.owl GO:0006817 biolink:NamedThing phosphate ion transport The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0006835 biolink:NamedThing dicarboxylic acid transport The directed movement of dicarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0006836 biolink:NamedThing neurotransmitter transport The directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell. NMDCO_relaxed.owl GO:0006846 biolink:NamedThing acetate transport The directed movement of acetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0006847 biolink:NamedThing plasma membrane acetate transport The directed movement of acetate across a plasma membrane. NMDCO_relaxed.owl GO:0006858 biolink:NamedThing extracellular transport The transport of substances that occurs outside cells. NMDCO_relaxed.owl GO:0006865 biolink:NamedThing amino acid transport The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0006869 biolink:NamedThing lipid transport The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. NMDCO_relaxed.owl GO:0006886 biolink:NamedThing intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. NMDCO_relaxed.owl GO:0006887 biolink:NamedThing exocytosis A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. NMDCO_relaxed.owl GO:0008272 biolink:NamedThing sulfate transport The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0008643 biolink:NamedThing carbohydrate transport The directed movement of carbohydrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carbohydrates are a group of organic compounds based of the general formula Cx(H2O)y. NMDCO_relaxed.owl GO:0008645 biolink:NamedThing hexose transmembrane transport The process in which hexose is transported across a membrane. Hexoses are aldoses with a chain of six carbon atoms in the molecule. NMDCO_relaxed.owl GO:0009914 biolink:NamedThing hormone transport The directed movement of hormones into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0010496 biolink:NamedThing intercellular transport The movement of substances between cells. NMDCO_relaxed.owl GO:0010970 biolink:NamedThing transport along microtubule The movement of organelles or other particles from one location in the cell to another along microtubules, driven by motor activity. NMDCO_relaxed.owl GO:0015031 biolink:NamedThing protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0015669 biolink:NamedThing gas transport The directed movement of substances that are gaseous in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0015695 biolink:NamedThing organic cation transport The directed movement of organic cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage. NMDCO_relaxed.owl GO:0015698 biolink:NamedThing inorganic anion transport The directed movement of inorganic anions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage. NMDCO_relaxed.owl GO:0015701 biolink:NamedThing bicarbonate transport The directed movement of bicarbonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0015711 biolink:NamedThing organic anion transport The directed movement of organic anions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage. NMDCO_relaxed.owl GO:0015718 biolink:NamedThing monocarboxylic acid transport The directed movement of monocarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0015721 biolink:NamedThing bile acid and bile salt transport The directed movement of bile acid and bile salts into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0015723 biolink:NamedThing bilirubin transport The directed movement of bilirubin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0015749 biolink:NamedThing monosaccharide transmembrane transport The process in which a monosaccharide is transported across a lipid bilayer, from one side of a membrane to the other. Monosaccharides are the simplest carbohydrates; they are polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides. NMDCO_relaxed.owl GO:0015774 biolink:NamedThing polysaccharide transport The directed movement of polysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. NMDCO_relaxed.owl GO:0015837 biolink:NamedThing amine transport The directed movement of amines, including polyamines, organic compounds containing one or more amino groups, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0015844 biolink:NamedThing monoamine transport The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0015849 biolink:NamedThing organic acid transport The directed movement of organic acids, any acidic compound containing carbon in covalent linkage, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0015850 biolink:NamedThing organic hydroxy compound transport The directed movement of an organic hydroxy compound (organic alcohol) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. An organic hydroxy compound is an organic compound having at least one hydroxy group attached to a carbon atom. NMDCO_relaxed.owl GO:0015851 biolink:NamedThing nucleobase transport The directed movement of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0015869 biolink:NamedThing protein-DNA complex transport The directed movement of protein-DNA complexes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0015870 biolink:NamedThing acetylcholine transport The directed movement of acetylcholine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions. NMDCO_relaxed.owl GO:0015874 biolink:NamedThing norepinephrine transport The directed movement of norepinephrine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Norepinephrine (3,4-dihydroxyphenyl-2-aminoethanol) is a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine. NMDCO_relaxed.owl GO:0015931 biolink:NamedThing nucleobase-containing compound transport The directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0016192 biolink:NamedThing vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. NMDCO_relaxed.owl GO:0019755 biolink:NamedThing one-carbon compound transport The directed movement of one-carbon compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0030001 biolink:NamedThing metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0032365 biolink:NamedThing intracellular lipid transport The directed movement of lipids within cells. NMDCO_relaxed.owl GO:0034219 biolink:NamedThing carbohydrate transmembrane transport The process in which a carbohydrate is transported across a membrane. NMDCO_relaxed.owl GO:0034220 biolink:NamedThing monoatomic ion transmembrane transport A process in which a monoatomic ion is transported across a membrane. Monatomic ions (also called simple ions) are ions consisting of exactly one atom. NMDCO_relaxed.owl GO:0034436 biolink:NamedThing glycoprotein transport The directed movement of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0034486 biolink:NamedThing vacuolar transmembrane transport The process in which a solute is transported from one side of the vacuolar membrane to the other. NMDCO_relaxed.owl GO:0034487 biolink:NamedThing vacuolar amino acid transmembrane transport The process in which an amino acid is transported from one side of the vacuolar membrane to the other. NMDCO_relaxed.owl GO:0035433 biolink:NamedThing acetate transmembrane transport The process in which acetate is transported across a membrane. Acetate is the 2-carbon carboxylic acid ethanoic acid. NMDCO_relaxed.owl GO:0035435 biolink:NamedThing phosphate ion transmembrane transport The process in which a phosphate is transported across a membrane. NMDCO_relaxed.owl GO:0042073 biolink:NamedThing intraciliary transport The bidirectional movement of large protein complexes along microtubules within a cilium, mediated by motor proteins. NMDCO_relaxed.owl GO:0042886 biolink:NamedThing amide transport The directed movement of an amide, any compound containing one, two, or three acyl groups attached to a nitrogen atom, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0046907 biolink:NamedThing intracellular transport The directed movement of substances within a cell. NMDCO_relaxed.owl GO:0046942 biolink:NamedThing carboxylic acid transport The directed movement of carboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carboxylic acids are organic acids containing one or more carboxyl (COOH) groups or anions (COO-). NMDCO_relaxed.owl GO:0047496 biolink:NamedThing vesicle transport along microtubule The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination. NMDCO_relaxed.owl GO:0048193 biolink:NamedThing Golgi vesicle transport The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles. NMDCO_relaxed.owl GO:0050657 biolink:NamedThing nucleic acid transport The directed movement of nucleic acids, single or double-stranded polynucleotides involved in the storage, transmission and transfer of genetic information, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0050658 biolink:NamedThing RNA transport The directed movement of RNA, ribonucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051027 biolink:NamedThing DNA transport The directed movement of RNA, deoxyribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051169 biolink:NamedThing nuclear transport The directed movement of substances into, out of, or within the nucleus. NMDCO_relaxed.owl GO:0051620 biolink:NamedThing norepinephrine uptake The directed movement of norepinephrine into a cell, typically presynaptic neurons or glial cells. Norepinephrine (3,4-dihydroxyphenyl-2-aminoethanol) is a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine. NMDCO_relaxed.owl GO:0051630 biolink:NamedThing acetylcholine uptake The directed movement of acetylcholine into a cell, typically presynaptic neurons or glial cells. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. NMDCO_relaxed.owl GO:0051904 biolink:NamedThing pigment granule transport The directed movement of pigment granules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0051937 biolink:NamedThing catecholamine transport The directed movement of catecholamines, a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. NMDCO_relaxed.owl GO:0055085 biolink:NamedThing transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. NMDCO_relaxed.owl GO:0055107 biolink:NamedThing Golgi to secretory granule transport The directed movement of proteins from the Golgi to a secretory granule. The secretory granule is a membrane-bounded particle, usually protein, formed in the granular endoplasmic reticulum and the Golgi complex. NMDCO_relaxed.owl GO:0055108 biolink:NamedThing Golgi to transport vesicle transport The directed movement of proteins from the Golgi to a transport vesicle. Continuously secreted proteins are sorted into transport vesicles that fuse with the plasma membrane, releasing their contents by exocytosis. NMDCO_relaxed.owl GO:0065002 biolink:NamedThing intracellular protein transmembrane transport The directed movement of proteins in a cell, from one side of a membrane to another by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0070633 biolink:NamedThing transepithelial transport The directed movement of a substance from one side of an epithelium to the other. NMDCO_relaxed.owl GO:0071702 biolink:NamedThing organic substance transport The directed movement of organic substances into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore. An organic substance is a molecular entity that contains carbon. NMDCO_relaxed.owl GO:0071705 biolink:NamedThing nitrogen compound transport The directed movement of nitrogen-containing compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0071806 biolink:NamedThing protein transmembrane transport The process in which a protein is transported across a membrane. NMDCO_relaxed.owl GO:0072348 biolink:NamedThing sulfur compound transport The directed movement of compounds that contain sulfur, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0072488 biolink:NamedThing ammonium transmembrane transport The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. NMDCO_relaxed.owl GO:0090493 biolink:NamedThing catecholamine uptake The directed movement of catecholamine into a cell. NMDCO_relaxed.owl GO:0098655 biolink:NamedThing monoatomic cation transmembrane transport The process in which a monoatomic cation is transported across a membrane. Monatomic cations (also called simple cations) are positively charged ions consisting of exactly one atom. NMDCO_relaxed.owl GO:0098657 biolink:NamedThing import into cell The directed movement of some substance from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. NMDCO_relaxed.owl GO:0098660 biolink:NamedThing inorganic ion transmembrane transport The process in which an inorganic ion is transported across a membrane. NMDCO_relaxed.owl GO:0098661 biolink:NamedThing inorganic anion transmembrane transport The process in which an inorganic anion is transported across a membrane. NMDCO_relaxed.owl GO:0098662 biolink:NamedThing inorganic cation transmembrane transport A process in which an inorganic cation is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:0098876 biolink:NamedThing vesicle-mediated transport to the plasma membrane The directed movement of substances to the plasma membrane in transport vesicles that fuse with the plasma membrane by exocytosis. NMDCO_relaxed.owl GO:0099111 biolink:NamedThing microtubule-based transport A microtubule-based process that results in the transport of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules. NMDCO_relaxed.owl GO:0099632 biolink:NamedThing protein transport within plasma membrane A process in which protein is transported from one region of the plasma membrane to another. NMDCO_relaxed.owl GO:0140352 biolink:NamedThing export from cell The directed movement of some substance from a cell, into the extracellular region. This may occur via transport across the plasma membrane or via exocytosis. NMDCO_relaxed.owl GO:0140353 biolink:NamedThing lipid export from cell The directed movement of a lipid from a cell, into the extracellular region. NMDCO_relaxed.owl GO:0140354 biolink:NamedThing lipid import into cell The directed movement of a lipid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. NMDCO_relaxed.owl GO:1901264 biolink:NamedThing carbohydrate derivative transport The directed movement of a carbohydrate derivative into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:1901374 biolink:NamedThing acetate ester transport The directed movement of an acetate ester into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. NMDCO_relaxed.owl GO:1903825 biolink:NamedThing organic acid transmembrane transport The process in which an organic acid is transported across a membrane. NMDCO_relaxed.owl GO:1904659 biolink:NamedThing glucose transmembrane transport The process in which glucose is transported across a membrane. NMDCO_relaxed.owl GO:1905039 biolink:NamedThing carboxylic acid transmembrane transport The process in which carboxylic acid is transported across a membrane. NMDCO_relaxed.owl GO:0006860 biolink:NamedThing extracellular amino acid transport The directed extracellular movement of amino acids. NMDCO_relaxed.owl GO:0003361 biolink:NamedThing noradrenergic neuron differentiation involved in brainstem development The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron that is part of the brainstem. NMDCO_relaxed.owl GO:0003365 biolink:NamedThing establishment of cell polarity involved in ameboidal cell migration The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell. NMDCO_relaxed.owl GO:0030010 biolink:NamedThing establishment of cell polarity The specification and formation of anisotropic intracellular organization or cell growth patterns. NMDCO_relaxed.owl GO:0003379 biolink:NamedThing establishment of cell polarity involved in gastrulation cell migration The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell taking part in gastrulation. NMDCO_relaxed.owl GO:0045200 biolink:NamedThing establishment of neuroblast polarity The specification and formation of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system. NMDCO_relaxed.owl GO:0090162 biolink:NamedThing establishment of epithelial cell polarity The specification and formation of anisotropic intracellular organization of an epithelial cell. NMDCO_relaxed.owl GO:0003371 biolink:NamedThing establishment or maintenance of cytoskeleton polarity involved in ameboidal cell migration Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell. NMDCO_relaxed.owl GO:0003380 biolink:NamedThing establishment or maintenance of cytoskeleton polarity involved in gastrulation Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell taking part in gastrulation. NMDCO_relaxed.owl GO:0003411 biolink:NamedThing cell motility involved in camera-type eye morphogenesis Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another and contributes to the physical shaping or formation of the camera-type eye. NMDCO_relaxed.owl GO:0003413 biolink:NamedThing chondrocyte differentiation involved in endochondral bone morphogenesis The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the development of a bone. A chondrocyte is a polymorphic cell that forms cartilage. NMDCO_relaxed.owl GO:0003414 biolink:NamedThing chondrocyte morphogenesis involved in endochondral bone morphogenesis The process in which the structures of a chondrocyte that will contribute to bone development are generated and organized. NMDCO_relaxed.owl GO:0003433 biolink:NamedThing chondrocyte development involved in endochondral bone morphogenesis The progression of a chondrocyte over time from after its commitment to its mature state where the chondrocyte will contribute to the shaping of an endochondral bone. NMDCO_relaxed.owl GO:0003824 biolink:NamedThing catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. NMDCO_relaxed.owl GO:0004842 biolink:NamedThing ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y = Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. NMDCO_relaxed.owl GO:0005215 biolink:NamedThing transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells. NMDCO_relaxed.owl GO:0016301 biolink:NamedThing kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. NMDCO_relaxed.owl GO:0019107 biolink:NamedThing myristoyltransferase activity Catalysis of the transfer of a myristoyl (CH3-[CH2]12-CO-) group to an acceptor molecule. NMDCO_relaxed.owl GO:0004518 biolink:NamedThing nuclease activity Catalysis of the hydrolysis of ester linkages within nucleic acids. NMDCO_relaxed.owl GO:0016788 biolink:NamedThing hydrolase activity, acting on ester bonds Catalysis of the hydrolysis of any ester bond. NMDCO_relaxed.owl GO:0004536 biolink:NamedThing DNA nuclease activity Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid. NMDCO_relaxed.owl GO:0140097 biolink:NamedThing catalytic activity, acting on DNA Catalytic activity that acts to modify DNA. NMDCO_relaxed.owl GO:0005275 biolink:NamedThing amine transmembrane transporter activity Enables the transfer of amines, including polyamines, from one side of a membrane to the other. Amines are organic compounds that are weakly basic in character and contain an amino (-NH2) or substituted amino group. NMDCO_relaxed.owl GO:0022857 biolink:NamedThing transmembrane transporter activity Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. NMDCO_relaxed.owl GO:0005277 biolink:NamedThing acetylcholine transmembrane transporter activity Enables the transfer of acetylcholine from one side of a membrane to the other. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions. NMDCO_relaxed.owl GO:0005310 biolink:NamedThing dicarboxylic acid transmembrane transporter activity Enables the transfer of dicarboxylic acids from one side of a membrane to the other. A dicarboxylic acid is an organic acid with two COOH groups. NMDCO_relaxed.owl GO:0005342 biolink:NamedThing organic acid transmembrane transporter activity Enables the transfer of organic acids from one side of a membrane to the other. Organic acids are acidic compound containing carbon in covalent linkage. NMDCO_relaxed.owl GO:0005355 biolink:NamedThing glucose transmembrane transporter activity Enables the transfer of the hexose monosaccharide glucose from one side of a membrane to the other. NMDCO_relaxed.owl GO:0008028 biolink:NamedThing monocarboxylic acid transmembrane transporter activity Enables the transfer of monocarboxylic acids from one side of a membrane to the other. A monocarboxylic acid is an organic acid with one COOH group. NMDCO_relaxed.owl GO:0008320 biolink:NamedThing protein transmembrane transporter activity Enables the transfer of a protein from one side of a membrane to the other. NMDCO_relaxed.owl GO:0008324 biolink:NamedThing monoatomic cation transmembrane transporter activity Enables the transfer of cation from one side of a membrane to the other. NMDCO_relaxed.owl GO:0008504 biolink:NamedThing monoamine transmembrane transporter activity Enables the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of a membrane to the other. NMDCO_relaxed.owl GO:0008514 biolink:NamedThing organic anion transmembrane transporter activity Enables the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage. NMDCO_relaxed.owl GO:0015075 biolink:NamedThing monoatomic ion transmembrane transporter activity Enables the transfer of an ion from one side of a membrane to the other. NMDCO_relaxed.owl GO:0015081 biolink:NamedThing sodium ion transmembrane transporter activity Enables the transfer of sodium ions (Na+) from one side of a membrane to the other. NMDCO_relaxed.owl GO:0015101 biolink:NamedThing organic cation transmembrane transporter activity Enables the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage. NMDCO_relaxed.owl GO:0015103 biolink:NamedThing inorganic anion transmembrane transporter activity Enables the transfer of inorganic anions from one side of a membrane to the other. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage. NMDCO_relaxed.owl GO:0015114 biolink:NamedThing phosphate ion transmembrane transporter activity Enables the transfer of phosphate (PO4 3-) ions from one side of a membrane to the other. NMDCO_relaxed.owl GO:0015116 biolink:NamedThing sulfate transmembrane transporter activity Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. NMDCO_relaxed.owl GO:0015123 biolink:NamedThing acetate transmembrane transporter activity Enables the transfer of acetate from one side of a membrane to the other. Acetate is the 2-carbon carboxylic acid ethanoic acid. NMDCO_relaxed.owl GO:0015125 biolink:NamedThing bile acid transmembrane transporter activity Enables the transfer of bile acid from one side of a membrane to the other. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine. NMDCO_relaxed.owl GO:0015127 biolink:NamedThing bilirubin transmembrane transporter activity Enables the transfer of bilirubin from one side of a membrane to the other. Bilirubin is a linear tetrapyrrole produced in the reticuloendothelial system from biliverdin and transported to the liver as a complex with serum albumin. In the liver, bilirubin is converted to bilirubin bisglucuronide, which is excreted in the bile. NMDCO_relaxed.owl GO:0015144 biolink:NamedThing carbohydrate transmembrane transporter activity Enables the transfer of carbohydrate from one side of a membrane to the other. NMDCO_relaxed.owl GO:0015145 biolink:NamedThing monosaccharide transmembrane transporter activity Enables the transfer of a monosaccharide from one side of a membrane to the other. NMDCO_relaxed.owl GO:0015149 biolink:NamedThing hexose transmembrane transporter activity Enables the transfer of a hexose sugar, a monosaccharide with 6 carbon atoms, from one side of a membrane to the other. NMDCO_relaxed.owl GO:0015159 biolink:NamedThing polysaccharide transmembrane transporter activity Enables the transfer of polysaccharides from one side of a membrane to the other. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. NMDCO_relaxed.owl GO:0015171 biolink:NamedThing amino acid transmembrane transporter activity Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group. NMDCO_relaxed.owl GO:0015205 biolink:NamedThing nucleobase transmembrane transporter activity Enables the transfer of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acidfrom one side of a membrane to the other. NMDCO_relaxed.owl GO:0015318 biolink:NamedThing inorganic molecular entity transmembrane transporter activity Enables the transfer of an inorganic molecular entity from the outside of a cell to the inside of the cell across a membrane. An inorganic molecular entity is a molecular entity that contains no carbon. NMDCO_relaxed.owl GO:0015932 biolink:NamedThing nucleobase-containing compound transmembrane transporter activity Enables the transfer of nucleobases, nucleosides, nucleotides and nucleic acids from one side of a membrane to the other. NMDCO_relaxed.owl GO:0022804 biolink:NamedThing active transmembrane transporter activity Enables the transfer of a specific substance or related group of substances from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction. NMDCO_relaxed.owl GO:0022884 biolink:NamedThing macromolecule transmembrane transporter activity Enables the transfer of a macromolecule from one side of a membrane to the other. NMDCO_relaxed.owl GO:0022890 biolink:NamedThing inorganic cation transmembrane transporter activity Enables the transfer of inorganic cations from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage. NMDCO_relaxed.owl GO:0042887 biolink:NamedThing amide transmembrane transporter activity Enables the transfer of an amide, any compound containing one, two, or three acyl groups attached to a nitrogen atom, from one side of a membrane to the other. NMDCO_relaxed.owl GO:0046873 biolink:NamedThing metal ion transmembrane transporter activity Enables the transfer of metal ions from one side of a membrane to the other. NMDCO_relaxed.owl GO:0046943 biolink:NamedThing carboxylic acid transmembrane transporter activity Enables the transfer of carboxylic acids from one side of a membrane to the other. Carboxylic acids are organic acids containing one or more carboxyl (COOH) groups or anions (COO-). NMDCO_relaxed.owl GO:0051032 biolink:NamedThing nucleic acid transmembrane transporter activity Enables the transfer of nucleic acids from one side of a membrane to the other. Nucleic acids are single or double-stranded polynucleotides involved in the storage, transmission and transfer of genetic information. NMDCO_relaxed.owl GO:0051033 biolink:NamedThing RNA transmembrane transporter activity Enables the transfer of RNA, ribonucleic acid, from one side of a membrane to the other. NMDCO_relaxed.owl GO:0051035 biolink:NamedThing DNA transmembrane transporter activity Enables the transfer of DNA, deoxyribonucleic acid, from one side of a membrane to the other. NMDCO_relaxed.owl GO:1901375 biolink:NamedThing acetate ester transmembrane transporter activity Enables the transfer of an acetate ester from one side of a membrane to the other. NMDCO_relaxed.owl GO:1901505 biolink:NamedThing carbohydrate derivative transmembrane transporter activity Enables the transfer of carbohydrate derivative from one side of a membrane to the other. NMDCO_relaxed.owl GO:1901618 biolink:NamedThing organic hydroxy compound transmembrane transporter activity Enables the transfer of organic hydroxy compound from one side of a membrane to the other. NMDCO_relaxed.owl GO:1901682 biolink:NamedThing sulfur compound transmembrane transporter activity Enables the transfer of a sulfur compound from one side of a membrane to the other. NMDCO_relaxed.owl GO:1901702 biolink:NamedThing salt transmembrane transporter activity Enables the transfer of salt from one side of a membrane to the other. NMDCO_relaxed.owl GO:0005319 biolink:NamedThing lipid transporter activity Enables the directed movement of lipids into, out of or within a cell, or between cells. NMDCO_relaxed.owl GO:0140318 biolink:NamedThing protein transporter activity Directly binding to a specific protein and delivering it to a specific cellular location. NMDCO_relaxed.owl GO:1904680 biolink:NamedThing peptide transmembrane transporter activity Enables the transfer of a peptide from one side of a membrane to the other. NMDCO_relaxed.owl GO:0005576 biolink:NamedThing extracellular region The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. NMDCO_relaxed.owl GO:0005615 biolink:NamedThing extracellular space That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. NMDCO_relaxed.owl GO:0005622 biolink:NamedThing intracellular anatomical structure A component of a cell contained within (but not including) the plasma membrane. In eukaryotes it includes the nucleus and cytoplasm. NMDCO_relaxed.owl GO:0005930 biolink:NamedThing axoneme The bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements. NMDCO_relaxed.owl GO:0012505 biolink:NamedThing endomembrane system A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. NMDCO_relaxed.owl GO:0030054 biolink:NamedThing cell junction A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella. NMDCO_relaxed.owl GO:0030312 biolink:NamedThing external encapsulating structure A structure that lies outside the plasma membrane and surrounds the entire cell or cells. This does not include the periplasmic space. NMDCO_relaxed.owl GO:0031252 biolink:NamedThing cell leading edge The area of a motile cell closest to the direction of movement. NMDCO_relaxed.owl GO:0031256 biolink:NamedThing leading edge membrane The portion of the plasma membrane surrounding the leading edge of a motile cell. NMDCO_relaxed.owl GO:0031974 biolink:NamedThing membrane-enclosed lumen The enclosed volume within a sealed membrane or between two sealed membranes. Encompasses the volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear envelope lumen. NMDCO_relaxed.owl GO:0031975 biolink:NamedThing envelope A multilayered structure surrounding all or part of a cell; encompasses one or more lipid bilayers, and may include a cell wall layer; also includes the space between layers. NMDCO_relaxed.owl GO:0032432 biolink:NamedThing actin filament bundle An assembly of actin filaments that are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness. NMDCO_relaxed.owl GO:0035869 biolink:NamedThing ciliary transition zone A region of the cilium between the basal body and proximal segment that is characterized by Y-shaped assemblages that connect axonemal microtubules to the ciliary membrane. The ciliary transition zone appears to function as a gate that controls ciliary membrane composition and separates the cytosol from the ciliary plasm. NMDCO_relaxed.owl GO:0036477 biolink:NamedThing somatodendritic compartment The region of a neuron that includes the cell body (cell soma) and dendrite(s), but excludes the axon. NMDCO_relaxed.owl GO:0042641 biolink:NamedThing actomyosin Any complex of actin, myosin, and accessory proteins. NMDCO_relaxed.owl GO:0042995 biolink:NamedThing cell projection A prolongation or process extending from a cell, e.g. a flagellum or axon. NMDCO_relaxed.owl GO:0044297 biolink:NamedThing cell body The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections. NMDCO_relaxed.owl GO:0071944 biolink:NamedThing cell periphery The broad region around and including the plasma membrane of a cell, encompassing the cell cortex (inside the cell), the plasma membrane, and any external encapsulating structures. NMDCO_relaxed.owl GO:0097427 biolink:NamedThing microtubule bundle An arrangement of closely apposed microtubules running parallel to each other. NMDCO_relaxed.owl GO:0098793 biolink:NamedThing presynapse The part of a synapse that is part of the presynaptic cell. NMDCO_relaxed.owl GO:0098794 biolink:NamedThing postsynapse The part of a synapse that is part of the post-synaptic cell. NMDCO_relaxed.owl GO:0099080 biolink:NamedThing supramolecular complex A cellular component that consists of an indeterminate number of proteins or macromolecular complexes, organized into a regular, higher-order structure such as a polymer, sheet, network or a fiber. NMDCO_relaxed.owl GO:0005577 biolink:NamedThing fibrinogen complex A highly soluble, elongated protein complex found in blood plasma and involved in clot formation. It is converted into fibrin monomer by the action of thrombin. In the mouse, fibrinogen is a hexamer, 46 nm long and 9 nm maximal diameter, containing two sets of nonidentical chains (alpha, beta, and gamma) linked together by disulfide bonds. NMDCO_relaxed.owl GO:0005581 biolink:NamedThing collagen trimer A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers typically assemble into higher order structures. NMDCO_relaxed.owl GO:0030990 biolink:NamedThing intraciliary transport particle A nonmembrane-bound oligomeric protein complex that participates in bidirectional transport of molecules (cargo) along axonemal microtubules. NMDCO_relaxed.owl GO:0061695 biolink:NamedThing transferase complex, transferring phosphorus-containing groups A transferase complex capable of catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). NMDCO_relaxed.owl GO:0098796 biolink:NamedThing membrane protein complex Any protein complex that is part of a membrane. NMDCO_relaxed.owl GO:0098797 biolink:NamedThing plasma membrane protein complex Any protein complex that is part of the plasma membrane. NMDCO_relaxed.owl GO:0140513 biolink:NamedThing nuclear protein-containing complex A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together in the nucleus. NMDCO_relaxed.owl GO:1902494 biolink:NamedThing catalytic complex A protein complex which is capable of catalytic activity. NMDCO_relaxed.owl GO:1902495 biolink:NamedThing transmembrane transporter complex A transmembrane protein complex which enables the transfer of a substance from one side of a membrane to the other. NMDCO_relaxed.owl GO:1990351 biolink:NamedThing transporter complex A protein complex facilitating transport of molecules (proteins, small molecules, nucleic acids) into, out of or within a cell, or between cells. NMDCO_relaxed.owl GO:1990904 biolink:NamedThing ribonucleoprotein complex A macromolecular complex that contains both RNA and protein molecules. NMDCO_relaxed.owl GO:0005583 biolink:NamedThing fibrillar collagen trimer Any triple helical collagen trimer that forms fibrils. NMDCO_relaxed.owl GO:0030936 biolink:NamedThing transmembrane collagen trimer Any collagen trimer that passes through a lipid bilayer membrane. NMDCO_relaxed.owl GO:0098642 biolink:NamedThing network-forming collagen trimer A collagen trimer that forms networks. NMDCO_relaxed.owl GO:0098651 biolink:NamedThing basement membrane collagen trimer Any collagen timer that is part of a basement membrane. NMDCO_relaxed.owl GO:0005587 biolink:NamedThing collagen type IV trimer A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes. NMDCO_relaxed.owl GO:0005604 biolink:NamedThing basement membrane A collagen-containing extracellular matrix consisting of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers. NMDCO_relaxed.owl GO:0062023 biolink:NamedThing collagen-containing extracellular matrix An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells. NMDCO_relaxed.owl GO:0043231 biolink:NamedThing intracellular membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. NMDCO_relaxed.owl GO:0097708 biolink:NamedThing intracellular vesicle Any vesicle that is part of the intracellular region. NMDCO_relaxed.owl GO:0005635 biolink:NamedThing nuclear envelope The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space). NMDCO_relaxed.owl GO:0031967 biolink:NamedThing organelle envelope A double membrane structure enclosing an organelle, including two lipid bilayers and the region between them. In some cases, an organelle envelope may have more than two membranes. NMDCO_relaxed.owl GO:0043232 biolink:NamedThing intracellular non-membrane-bounded organelle Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes. NMDCO_relaxed.owl GO:0005856 biolink:NamedThing cytoskeleton A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. NMDCO_relaxed.owl GO:0005775 biolink:NamedThing vacuolar lumen The volume enclosed within the vacuolar membrane. NMDCO_relaxed.owl GO:0043233 biolink:NamedThing organelle lumen The internal volume enclosed by the membranes of a particular organelle; includes the volume enclosed by a single organelle membrane, e.g. endoplasmic reticulum lumen, or the volume enclosed by the innermost of the two lipid bilayers of an organelle envelope, e.g. nuclear lumen. NMDCO_relaxed.owl GO:0070013 biolink:NamedThing intracellular organelle lumen An organelle lumen that is part of an intracellular organelle. NMDCO_relaxed.owl GO:0005798 biolink:NamedThing Golgi-associated vesicle Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell. NMDCO_relaxed.owl GO:0031410 biolink:NamedThing cytoplasmic vesicle A vesicle found in the cytoplasm of a cell. NMDCO_relaxed.owl GO:0030133 biolink:NamedThing transport vesicle Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, from the Golgi to the ER (retrograde transport) or to destinations within or outside the cell. NMDCO_relaxed.owl GO:0048770 biolink:NamedThing pigment granule A small, subcellular membrane-bounded vesicle containing pigment and/or pigment precursor molecules. Pigment granule biogenesis is poorly understood, as pigment granules are derived from multiple sources including the endoplasmic reticulum, coated vesicles, lysosomes, and endosomes. NMDCO_relaxed.owl GO:0099503 biolink:NamedThing secretory vesicle A cytoplasmic, membrane bound vesicle that is capable of fusing to the plasma membrane to release its contents into the extracellular space. NMDCO_relaxed.owl GO:0005874 biolink:NamedThing microtubule Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle. NMDCO_relaxed.owl GO:0099513 biolink:NamedThing polymeric cytoskeletal fiber A component of the cytoskeleton consisting of a homo or heteropolymeric fiber constructed from an indeterminate number of protein subunits. NMDCO_relaxed.owl GO:0005884 biolink:NamedThing actin filament A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane. NMDCO_relaxed.owl GO:0005879 biolink:NamedThing axonemal microtubule A microtubule in the axoneme of a eukaryotic cilium or flagellum; an axoneme contains nine modified doublet microtubules, which may or may not surround a pair of single microtubules. NMDCO_relaxed.owl GO:0005880 biolink:NamedThing nuclear microtubule Any microtubule in the nucleus of a cell. NMDCO_relaxed.owl GO:0005881 biolink:NamedThing cytoplasmic microtubule Any microtubule in the cytoplasm of a cell. NMDCO_relaxed.owl GO:0005902 biolink:NamedThing microvillus Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells. NMDCO_relaxed.owl GO:0098858 biolink:NamedThing actin-based cell projection A cell projection supported by an assembly of actin filaments, and which lacks microtubules. NMDCO_relaxed.owl GO:0005911 biolink:NamedThing cell-cell junction A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects. NMDCO_relaxed.owl GO:0070161 biolink:NamedThing anchoring junction A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix. NMDCO_relaxed.owl GO:0043227 biolink:NamedThing membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. NMDCO_relaxed.owl GO:0031982 biolink:NamedThing vesicle Any small, fluid-filled, spherical organelle enclosed by membrane. NMDCO_relaxed.owl GO:0065010 biolink:NamedThing extracellular membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a lipid bilayer membrane and occurring outside the cell. NMDCO_relaxed.owl GO:0120025 biolink:NamedThing plasma membrane bounded cell projection A prolongation or process extending from a cell and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon. NMDCO_relaxed.owl GO:0032059 biolink:NamedThing bleb A cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Blebs are formed during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses. NMDCO_relaxed.owl GO:0043005 biolink:NamedThing neuron projection A prolongation or process extending from a nerve cell, e.g. an axon or dendrite. NMDCO_relaxed.owl GO:0005975 biolink:NamedThing carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. NMDCO_relaxed.owl GO:0005977 biolink:NamedThing glycogen metabolic process The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha-(1->4) glycosidic linkage, joined together by alpha-(1->6) glycosidic linkages. NMDCO_relaxed.owl GO:0005996 biolink:NamedThing monosaccharide metabolic process The chemical reactions and pathways involving monosaccharides, the simplest carbohydrates. They are polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides. NMDCO_relaxed.owl GO:0006006 biolink:NamedThing glucose metabolic process The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides. NMDCO_relaxed.owl GO:0006022 biolink:NamedThing aminoglycan metabolic process The chemical reactions and pathways involving aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages. NMDCO_relaxed.owl GO:0006082 biolink:NamedThing organic acid metabolic process The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage. NMDCO_relaxed.owl GO:0006083 biolink:NamedThing acetate metabolic process The chemical reactions and pathways involving acetate, the anion of acetic acid. NMDCO_relaxed.owl GO:0006139 biolink:NamedThing nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. NMDCO_relaxed.owl GO:0006259 biolink:NamedThing DNA metabolic process Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides. NMDCO_relaxed.owl GO:0006518 biolink:NamedThing peptide metabolic process The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. NMDCO_relaxed.owl GO:0006520 biolink:NamedThing amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups. NMDCO_relaxed.owl GO:0006584 biolink:NamedThing catecholamine metabolic process The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine. NMDCO_relaxed.owl GO:0006586 biolink:NamedThing indolalkylamine metabolic process The chemical reactions and pathways involving indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group. NMDCO_relaxed.owl GO:0006629 biolink:NamedThing lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. NMDCO_relaxed.owl GO:0006725 biolink:NamedThing cellular aromatic compound metabolic process The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells. NMDCO_relaxed.owl GO:0006790 biolink:NamedThing sulfur compound metabolic process The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione. NMDCO_relaxed.owl GO:0006793 biolink:NamedThing phosphorus metabolic process The chemical reactions and pathways involving the nonmetallic element phosphorus or compounds that contain phosphorus, usually in the form of a phosphate group (PO4). NMDCO_relaxed.owl GO:0006796 biolink:NamedThing phosphate-containing compound metabolic process The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid. NMDCO_relaxed.owl GO:0006807 biolink:NamedThing nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen. NMDCO_relaxed.owl GO:0008202 biolink:NamedThing steroid metabolic process The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. NMDCO_relaxed.owl GO:0008206 biolink:NamedThing bile acid metabolic process The chemical reactions and pathways involving bile acids, a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine. NMDCO_relaxed.owl GO:0008291 biolink:NamedThing acetylcholine metabolic process The chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues. NMDCO_relaxed.owl GO:0009100 biolink:NamedThing glycoprotein metabolic process The chemical reactions and pathways involving glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide. NMDCO_relaxed.owl GO:0009112 biolink:NamedThing nucleobase metabolic process The chemical reactions and pathways involving a nucleobase, a nitrogenous base that is a constituent of a nucleic acid, e.g. the purines: adenine, guanine, hypoxanthine, xanthine and the pyrimidines: cytosine, uracil, thymine. NMDCO_relaxed.owl GO:0009308 biolink:NamedThing amine metabolic process The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom. NMDCO_relaxed.owl GO:0009712 biolink:NamedThing catechol-containing compound metabolic process The chemical reactions and pathways involving a compound containing a pyrocatechol (1,2-benzenediol) nucleus or substituent. NMDCO_relaxed.owl GO:0009820 biolink:NamedThing alkaloid metabolic process The chemical reactions and pathways involving alkaloids, nitrogen containing natural products which are not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases). NMDCO_relaxed.owl GO:0016070 biolink:NamedThing RNA metabolic process The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. NMDCO_relaxed.owl GO:0018958 biolink:NamedThing phenol-containing compound metabolic process The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring. NMDCO_relaxed.owl GO:0019318 biolink:NamedThing hexose metabolic process The chemical reactions and pathways involving a hexose, any monosaccharide with a chain of six carbon atoms in the molecule. NMDCO_relaxed.owl GO:0019538 biolink:NamedThing protein metabolic process The chemical reactions and pathways involving a protein. Includes protein modification. NMDCO_relaxed.owl GO:0019748 biolink:NamedThing secondary metabolic process The chemical reactions and pathways resulting in many of the chemical changes of compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. In multicellular organisms secondary metabolism is generally carried out in specific cell types, and may be useful for the organism as a whole. In unicellular organisms, secondary metabolism is often used for the production of antibiotics or for the utilization and acquisition of unusual nutrients. NMDCO_relaxed.owl GO:0019752 biolink:NamedThing carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-). NMDCO_relaxed.owl GO:0030203 biolink:NamedThing glycosaminoglycan metabolic process The chemical reactions and pathways involving glycosaminoglycans, any of a group of polysaccharides that contain amino sugars. NMDCO_relaxed.owl GO:0030212 biolink:NamedThing hyaluronan metabolic process The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine. NMDCO_relaxed.owl GO:0032787 biolink:NamedThing monocarboxylic acid metabolic process The chemical reactions and pathways involving monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-). NMDCO_relaxed.owl GO:0032963 biolink:NamedThing collagen metabolic process The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%). NMDCO_relaxed.owl GO:0033013 biolink:NamedThing tetrapyrrole metabolic process The chemical reactions and pathways involving tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next. NMDCO_relaxed.owl GO:0035834 biolink:NamedThing indole alkaloid metabolic process The chemical reactions and pathways involving an indole alkaloid, an alkaloid containing an indole skeleton. NMDCO_relaxed.owl GO:0042180 biolink:NamedThing cellular ketone metabolic process The chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms, as carried out by individual cells. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups. NMDCO_relaxed.owl GO:0042415 biolink:NamedThing norepinephrine metabolic process The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine. NMDCO_relaxed.owl GO:0042428 biolink:NamedThing serotonin metabolic process The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties. NMDCO_relaxed.owl GO:0042430 biolink:NamedThing indole-containing compound metabolic process The chemical reactions and pathways involving compounds that contain an indole (2,3-benzopyrrole) skeleton. NMDCO_relaxed.owl GO:0043170 biolink:NamedThing macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass. NMDCO_relaxed.owl GO:0043436 biolink:NamedThing oxoacid metabolic process The chemical reactions and pathways involving any oxoacid; an oxoacid is a compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons). NMDCO_relaxed.owl GO:0043603 biolink:NamedThing amide metabolic process The chemical reactions and pathways involving an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group, as carried out by individual cells. NMDCO_relaxed.owl GO:0043648 biolink:NamedThing dicarboxylic acid metabolic process The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing two carboxyl (COOH) groups or anions (COO-). NMDCO_relaxed.owl GO:0044238 biolink:NamedThing primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism. NMDCO_relaxed.owl GO:0044281 biolink:NamedThing small molecule metabolic process The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule. NMDCO_relaxed.owl GO:0046483 biolink:NamedThing heterocycle metabolic process The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings). NMDCO_relaxed.owl GO:0071704 biolink:NamedThing organic substance metabolic process The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon. NMDCO_relaxed.owl GO:0072592 biolink:NamedThing oxygen metabolic process The chemical reactions and pathways involving diatomic oxygen (O2). NMDCO_relaxed.owl GO:0090304 biolink:NamedThing nucleic acid metabolic process Any cellular metabolic process involving nucleic acids. NMDCO_relaxed.owl GO:0097164 biolink:NamedThing ammonium ion metabolic process The chemical reactions and pathways involving the ammonium ion. NMDCO_relaxed.owl GO:1900619 biolink:NamedThing acetate ester metabolic process The chemical reactions and pathways involving an acetate ester, any carboxylic ester where the carboxylic acid component is acetic acid. NMDCO_relaxed.owl GO:1901135 biolink:NamedThing carbohydrate derivative metabolic process The chemical reactions and pathways involving carbohydrate derivative. NMDCO_relaxed.owl GO:1901142 biolink:NamedThing insulin metabolic process The chemical reactions and pathways involving insulin. NMDCO_relaxed.owl GO:1901160 biolink:NamedThing primary amino compound metabolic process The chemical reactions and pathways involving primary amino compound. NMDCO_relaxed.owl GO:1901360 biolink:NamedThing organic cyclic compound metabolic process The chemical reactions and pathways involving organic cyclic compound. NMDCO_relaxed.owl GO:1901564 biolink:NamedThing organonitrogen compound metabolic process The chemical reactions and pathways involving organonitrogen compound. NMDCO_relaxed.owl GO:1901605 biolink:NamedThing alpha-amino acid metabolic process The chemical reactions and pathways involving an alpha-amino acid. NMDCO_relaxed.owl GO:1901615 biolink:NamedThing organic hydroxy compound metabolic process The chemical reactions and pathways involving organic hydroxy compound. NMDCO_relaxed.owl GO:1903510 biolink:NamedThing mucopolysaccharide metabolic process The chemical reactions and pathways involving mucopolysaccharide. NMDCO_relaxed.owl GO:0120252 biolink:NamedThing hydrocarbon metabolic process NMDCO_relaxed.owl GO:0006112 biolink:NamedThing energy reserve metabolic process The chemical reactions and pathways by which a cell derives energy from stored compounds such as fats or glycogen. NMDCO_relaxed.owl GO:0019329 biolink:NamedThing ammonia oxidation NMDCO_relaxed.owl GO:0055086 biolink:NamedThing nucleobase-containing small molecule metabolic process The cellular chemical reactions and pathways involving a nucleobase-containing small molecule: a nucleobase, a nucleoside, or a nucleotide. NMDCO_relaxed.owl GO:0006091 biolink:NamedThing generation of precursor metabolites and energy The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances. NMDCO_relaxed.owl GO:0006413 biolink:NamedThing translational initiation The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA. NMDCO_relaxed.owl GO:0034641 biolink:NamedThing cellular nitrogen compound metabolic process The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells. NMDCO_relaxed.owl GO:0043446 biolink:NamedThing cellular alkane metabolic process NMDCO_relaxed.owl GO:0015980 biolink:NamedThing energy derivation by oxidation of organic compounds The chemical reactions and pathways by which a cell derives energy from organic compounds; results in the oxidation of the compounds from which energy is released. NMDCO_relaxed.owl GO:0019331 biolink:NamedThing anaerobic respiration, using ammonium as electron donor NMDCO_relaxed.owl GO:0019332 biolink:NamedThing aerobic respiration, using nitrite as electron donor NMDCO_relaxed.owl GO:0019409 biolink:NamedThing aerobic respiration, using ammonia as electron donor NMDCO_relaxed.owl GO:0044270 biolink:NamedThing cellular nitrogen compound catabolic process The chemical reactions and pathways resulting in the breakdown of organic and inorganic nitrogenous compounds. NMDCO_relaxed.owl GO:0044271 biolink:NamedThing cellular nitrogen compound biosynthetic process The chemical reactions and pathways resulting in the formation of organic and inorganic nitrogenous compounds. NMDCO_relaxed.owl GO:0006309 biolink:NamedThing apoptotic DNA fragmentation The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments. NMDCO_relaxed.owl GO:0032986 biolink:NamedThing protein-DNA complex disassembly The disaggregation of a protein-DNA complex into its constituent components. NMDCO_relaxed.owl GO:0006403 biolink:NamedThing RNA localization A process in which RNA is transported to, or maintained in, a specific location. NMDCO_relaxed.owl GO:0033036 biolink:NamedThing macromolecule localization Any process in which a macromolecule is transported to, or maintained in, a specific location. NMDCO_relaxed.owl GO:0010876 biolink:NamedThing lipid localization Any process in which a lipid is transported to, or maintained in, a specific location. NMDCO_relaxed.owl GO:0033037 biolink:NamedThing polysaccharide localization Any process in which a polysaccharide is transported to, or maintained in, a specific location. NMDCO_relaxed.owl GO:0070727 biolink:NamedThing cellular macromolecule localization Any process in which a macromolecule is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell. NMDCO_relaxed.owl GO:0006415 biolink:NamedThing translational termination The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code). NMDCO_relaxed.owl GO:0032984 biolink:NamedThing protein-containing complex disassembly The disaggregation of a protein-containing macromolecular complex into its constituent components. NMDCO_relaxed.owl GO:0032988 biolink:NamedThing protein-RNA complex disassembly The disaggregation of a protein-RNA complex into its constituent components. NMDCO_relaxed.owl GO:0051261 biolink:NamedThing protein depolymerization The process in which protein polymers, compounds composed of a large number of component monomers, are broken down. Depolymerization occurs by the successive removal of monomers from an existing poly- or oligomeric protein. NMDCO_relaxed.owl GO:0010608 biolink:NamedThing post-transcriptional regulation of gene expression Any process that modulates the frequency, rate or extent of gene expression after the production of an RNA transcript. NMDCO_relaxed.owl GO:0043143 biolink:NamedThing regulation of translation by machinery localization Any process in which proteins and protein complexes involved in translation are transported to, or maintained in, a specific location. NMDCO_relaxed.owl GO:0006576 biolink:NamedThing biogenic amine metabolic process The chemical reactions and pathways occurring at the level of individual cells involving any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters. NMDCO_relaxed.owl GO:0042401 biolink:NamedThing biogenic amine biosynthetic process The chemical reactions and pathways occurring at the level of individual cells resulting in the formation of any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters. NMDCO_relaxed.owl GO:0120178 biolink:NamedThing steroid hormone biosynthetic process The chemical reactions and pathways resulting in the formation of any steroid hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone. NMDCO_relaxed.owl GO:0044258 biolink:NamedThing intestinal lipid catabolic process The chemical reactions and pathways resulting in the breakdown into fatty acids and monoglycerides of lipids in the small intestine. Lipids are broken down by lipases released by the pancreas. NMDCO_relaxed.owl GO:0051234 biolink:NamedThing establishment of localization Any process that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation. NMDCO_relaxed.owl GO:0045184 biolink:NamedThing establishment of protein localization The directed movement of a protein to a specific location. NMDCO_relaxed.owl GO:0051236 biolink:NamedThing establishment of RNA localization The directed movement of RNA to a specific location. NMDCO_relaxed.owl GO:0051303 biolink:NamedThing establishment of chromosome localization The directed movement of a chromosome to a specific location. NMDCO_relaxed.owl GO:0051649 biolink:NamedThing establishment of localization in cell Any process, occuring in a cell, that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation. NMDCO_relaxed.owl GO:0051650 biolink:NamedThing establishment of vesicle localization The directed movement of a vesicle to a specific location. NMDCO_relaxed.owl GO:0051656 biolink:NamedThing establishment of organelle localization The directed movement of an organelle to a specific location. NMDCO_relaxed.owl GO:0051683 biolink:NamedThing establishment of Golgi localization The directed movement of the Golgi to a specific location. NMDCO_relaxed.owl GO:0070634 biolink:NamedThing transepithelial ammonium transport The directed movement of ammonium ions from one side of an epithelium to the other. NMDCO_relaxed.owl GO:0032594 biolink:NamedThing protein transport within lipid bilayer The directed movement of a protein from one location to another within a lipid bilayer. NMDCO_relaxed.owl GO:0043001 biolink:NamedThing Golgi to plasma membrane protein transport The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane. NMDCO_relaxed.owl GO:0007034 biolink:NamedThing vacuolar transport The directed movement of substances into, out of or within a vacuole. NMDCO_relaxed.owl GO:0007097 biolink:NamedThing nuclear migration The directed movement of the nucleus to a specific location within a cell. NMDCO_relaxed.owl GO:0008088 biolink:NamedThing axo-dendritic transport The directed movement of organelles or molecules along microtubules in neuron projections. NMDCO_relaxed.owl GO:0030050 biolink:NamedThing vesicle transport along actin filament Movement of a vesicle along an actin filament, mediated by motor proteins. NMDCO_relaxed.owl GO:0030705 biolink:NamedThing cytoskeleton-dependent intracellular transport The directed movement of substances along cytoskeletal fibers such as microfilaments or microtubules within a cell. NMDCO_relaxed.owl GO:0072384 biolink:NamedThing organelle transport along microtubule The directed movement of an organelle along a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination. NMDCO_relaxed.owl GO:0098840 biolink:NamedThing protein transport along microtubule The directed movement of a protein along a microtubule, mediated by motor proteins. NMDCO_relaxed.owl GO:0099515 biolink:NamedThing actin filament-based transport The transport of organelles or other particles from one location in the cell to another along actin filaments. NMDCO_relaxed.owl GO:0099518 biolink:NamedThing vesicle cytoskeletal trafficking The directed movement of a vesicle along a cytoskeletal fiber such as a microtubule or and actin filament, mediated by motor proteins. NMDCO_relaxed.owl GO:0099640 biolink:NamedThing axo-dendritic protein transport The directed movement of proteins along microtubules in neuron projections. NMDCO_relaxed.owl GO:0006893 biolink:NamedThing Golgi to plasma membrane transport The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis. NMDCO_relaxed.owl GO:0006896 biolink:NamedThing Golgi to vacuole transport The directed movement of substances from the Golgi to the vacuole. NMDCO_relaxed.owl GO:0099003 biolink:NamedThing vesicle-mediated transport in synapse Any vesicle-mediated transport that occurs in a synapse. NMDCO_relaxed.owl GO:0110077 biolink:NamedThing vesicle-mediated intercellular transport A cellular transport process in which transported substances are moved in extracellular vesicles between cells; transported substances are enclosed in the vesicle lumen or located in the extracellular vesicle membrane. NMDCO_relaxed.owl GO:0006892 biolink:NamedThing post-Golgi vesicle-mediated transport The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles. NMDCO_relaxed.owl GO:0006903 biolink:NamedThing vesicle targeting The process in which vesicles are directed to specific destination membranes. Targeting involves coordinated interactions among cytoskeletal elements (microtubules or actin filaments), motor proteins, molecules at the vesicle membrane and target membrane surfaces, and vesicle cargo. NMDCO_relaxed.owl GO:0007154 biolink:NamedThing cell communication Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. NMDCO_relaxed.owl GO:0007163 biolink:NamedThing establishment or maintenance of cell polarity Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns. NMDCO_relaxed.owl GO:0007165 biolink:NamedThing signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. NMDCO_relaxed.owl GO:0007416 biolink:NamedThing synapse assembly The aggregation, arrangement and bonding together of a set of components to form a synapse. This process ends when the synapse is mature (functional). NMDCO_relaxed.owl GO:0008219 biolink:NamedThing cell death Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538). NMDCO_relaxed.owl GO:0022402 biolink:NamedThing cell cycle process The cellular process that ensures successive accurate and complete genome replication and chromosome segregation. NMDCO_relaxed.owl GO:0022406 biolink:NamedThing membrane docking The initial attachment of a membrane or protein to a target membrane. Docking requires only that the proteins come close enough to interact and adhere. NMDCO_relaxed.owl GO:0030029 biolink:NamedThing actin filament-based process Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins. NMDCO_relaxed.owl GO:0033059 biolink:NamedThing cellular pigmentation The deposition or aggregation of coloring matter in a cell. NMDCO_relaxed.owl GO:0048280 biolink:NamedThing vesicle fusion with Golgi apparatus The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi. NMDCO_relaxed.owl GO:0050808 biolink:NamedThing synapse organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell). NMDCO_relaxed.owl GO:0051301 biolink:NamedThing cell division The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells. NMDCO_relaxed.owl GO:0051469 biolink:NamedThing vesicle fusion with vacuole The joining of the lipid bilayer membrane around a vesicle with the lipid bilayer membrane around the vacuole. NMDCO_relaxed.owl GO:0051641 biolink:NamedThing cellular localization A cellular localization process whereby a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a cell including the localization of substances or cellular entities to the cell membrane. NMDCO_relaxed.owl GO:0051674 biolink:NamedThing localization of cell Any process in which a cell is transported to, and/or maintained in, a specific location. NMDCO_relaxed.owl GO:0071840 biolink:NamedThing cellular component organization or biogenesis A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component. NMDCO_relaxed.owl GO:0097194 biolink:NamedThing execution phase of apoptosis A stage of the apoptotic process that starts with the controlled breakdown of the cell through the action of effector caspases or other effector molecules (e.g. cathepsins, calpains etc.). Key steps of the execution phase are rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died. NMDCO_relaxed.owl GO:0140029 biolink:NamedThing exocytic process The cellular processes that contribute to exocytosis. NMDCO_relaxed.owl GO:1990748 biolink:NamedThing cellular detoxification Any process carried out at the cellular level that reduces or removes the toxicity of a toxic substance. These may include transport of the toxic substance away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance. NMDCO_relaxed.owl GO:0012501 biolink:NamedThing programmed cell death A process which begins when a cell receives an internal or external signal and activates a series of biochemical events (signaling pathway). The process ends with the death of the cell. NMDCO_relaxed.owl GO:0010623 biolink:NamedThing programmed cell death involved in cell development The activation of endogenous cellular processes that result in the death of a cell as part of its development. NMDCO_relaxed.owl GO:0006921 biolink:NamedThing cellular component disassembly involved in execution phase of apoptosis The breakdown of structures such as organelles, proteins, or other macromolecular structures during apoptosis. NMDCO_relaxed.owl GO:0007019 biolink:NamedThing microtubule depolymerization The removal of tubulin heterodimers from one or both ends of a microtubule. NMDCO_relaxed.owl GO:0022617 biolink:NamedThing extracellular matrix disassembly A process that results in the breakdown of the extracellular matrix. NMDCO_relaxed.owl GO:0030397 biolink:NamedThing membrane disassembly The controlled breakdown of any cell membrane in the context of a normal process such as autophagy. NMDCO_relaxed.owl GO:0032790 biolink:NamedThing ribosome disassembly The disaggregation of a ribosome into its constituent components; includes the dissociation of ribosomal subunits. NMDCO_relaxed.owl GO:0034769 biolink:NamedThing basement membrane disassembly The controlled breakdown of the basement membrane in the context of a normal process such as imaginal disc eversion. NMDCO_relaxed.owl GO:0061523 biolink:NamedThing cilium disassembly A cellular process that results in the breakdown of a cilium. NMDCO_relaxed.owl GO:0090166 biolink:NamedThing Golgi disassembly A cellular process that results in the breakdown of a Golgi apparatus that contributes to Golgi inheritance. NMDCO_relaxed.owl GO:0098883 biolink:NamedThing synapse pruning A cellular process that results in the controlled breakdown of synapse. After it starts the process is continuous until the synapse has disappeared. NMDCO_relaxed.owl GO:0150146 biolink:NamedThing cell junction disassembly The disaggregation of a cell junction into its constituent components. NMDCO_relaxed.owl GO:0150147 biolink:NamedThing cell-cell junction disassembly The disaggregation of a cell-cell junction into its constituent components. NMDCO_relaxed.owl GO:1903008 biolink:NamedThing organelle disassembly The disaggregation of an organelle into its constituent components. NMDCO_relaxed.owl GO:0007039 biolink:NamedThing protein catabolic process in the vacuole The chemical reactions and pathways resulting in the breakdown of a protein in the vacuole, usually by the action of vacuolar proteases. NMDCO_relaxed.owl GO:0007043 biolink:NamedThing cell-cell junction assembly The aggregation, arrangement and bonding together of a set of components to form a junction between cells. NMDCO_relaxed.owl GO:0045216 biolink:NamedThing cell-cell junction organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells. NMDCO_relaxed.owl GO:0007059 biolink:NamedThing chromosome segregation The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. In eukaryotes, chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles. NMDCO_relaxed.owl GO:0010032 biolink:NamedThing meiotic chromosome condensation Compaction of chromatin structure prior to meiosis in eukaryotic cells. NMDCO_relaxed.owl GO:0051078 biolink:NamedThing meiotic nuclear membrane disassembly The cell cycle process in which the controlled breakdown of the nuclear membranes during meiotic cell division occurs. NMDCO_relaxed.owl GO:0051647 biolink:NamedThing nucleus localization Any process in which the nucleus is transported to, and/or maintained in, a specific location within the cell. NMDCO_relaxed.owl GO:0140013 biolink:NamedThing meiotic nuclear division One of the two nuclear divisions that occur as part of the meiotic cell cycle. NMDCO_relaxed.owl GO:0086065 biolink:NamedThing cell communication involved in cardiac conduction Any process that mediates interactions between a cell and its surroundings that contributes to the process of cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. NMDCO_relaxed.owl GO:0007268 biolink:NamedThing chemical synaptic transmission The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse. NMDCO_relaxed.owl GO:0098916 biolink:NamedThing anterograde trans-synaptic signaling Cell-cell signaling from pre to post-synapse, across the synaptic cleft. NMDCO_relaxed.owl GO:0007269 biolink:NamedThing neurotransmitter secretion The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium-regulated exocytosis during synaptic transmission. NMDCO_relaxed.owl GO:0007271 biolink:NamedThing synaptic transmission, cholinergic The vesicular release of acetylcholine from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse. NMDCO_relaxed.owl GO:0007276 biolink:NamedThing gamete generation The generation and maintenance of gametes in a multicellular organism. A gamete is a haploid reproductive cell. NMDCO_relaxed.owl GO:0007292 biolink:NamedThing female gamete generation Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction. NMDCO_relaxed.owl GO:0008544 biolink:NamedThing epidermis development The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species. NMDCO_relaxed.owl GO:0048534 biolink:NamedThing hematopoietic or lymphoid organ development The process whose specific outcome is the progression of any organ involved in hematopoiesis (also known as hemopoiesis) or lymphoid cell activation over time, from its formation to the mature structure. Such development includes differentiation of resident cell types (stromal cells) and of migratory cell types dependent on the unique microenvironment afforded by the organ for their proper differentiation. NMDCO_relaxed.owl GO:0048806 biolink:NamedThing genitalia development The process whose specific outcome is the progression of the genitalia over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0060348 biolink:NamedThing bone development The process whose specific outcome is the progression of bone over time, from its formation to the mature structure. Bone is the hard skeletal connective tissue consisting of both mineral and cellular components. NMDCO_relaxed.owl GO:0050953 biolink:NamedThing sensory perception of light stimulus The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. NMDCO_relaxed.owl GO:0007605 biolink:NamedThing sensory perception of sound The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound. NMDCO_relaxed.owl GO:0050954 biolink:NamedThing sensory perception of mechanical stimulus The series of events required for an organism to receive a sensory mechanical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. NMDCO_relaxed.owl GO:0050975 biolink:NamedThing sensory perception of touch The series of events required for an organism to receive a touch stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. The perception of touch in animals is mediated by mechanoreceptors in the skin and mucous membranes and is the sense by which contact with objects gives evidence as to certain of their qualities. Different types of touch can be perceived (for example, light, coarse, pressure and tickling) and the stimulus may be external or internal (e.g. the feeling of a full stomach). NMDCO_relaxed.owl GO:0007606 biolink:NamedThing sensory perception of chemical stimulus The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. NMDCO_relaxed.owl GO:0019233 biolink:NamedThing sensory perception of pain The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances. This is a neurological process. NMDCO_relaxed.owl GO:0050952 biolink:NamedThing sensory perception of electrical stimulus The series of events required for an organism to receive a sensory electrical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. NMDCO_relaxed.owl GO:0007626 biolink:NamedThing locomotory behavior The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions. NMDCO_relaxed.owl GO:0007631 biolink:NamedThing feeding behavior NMDCO_relaxed.owl NBO:0000313 biolink:NamedThing behavior process "The action, reaction, or performance of an organism in response to external or internal stimuli." [GO:GO\:0007610] NMDCO_relaxed.owl GO:0008104 biolink:NamedThing protein localization Any process in which a protein is transported to, or maintained in, a specific location. NMDCO_relaxed.owl GO:0031503 biolink:NamedThing protein-containing complex localization A localization process that acts on a protein complex; the complex is transported to, or maintained in, a specific location. NMDCO_relaxed.owl GO:0032252 biolink:NamedThing secretory granule localization Any process in which a secretory granule is transported to, and/or maintained in, a specific location within the cell. NMDCO_relaxed.owl GO:0032253 biolink:NamedThing dense core granule localization Any process in which a dense core granule is transported to, and/or maintained in, a specific location within the cell. NMDCO_relaxed.owl GO:0033750 biolink:NamedThing ribosome localization A process in which a ribosome is transported to, and/or maintained in, a specific location. NMDCO_relaxed.owl GO:0050000 biolink:NamedThing chromosome localization Any process in which a chromosome is transported to, or maintained in, a specific location. NMDCO_relaxed.owl GO:0051640 biolink:NamedThing organelle localization Any process in which an organelle is transported to, and/or maintained in, a specific location. NMDCO_relaxed.owl GO:0051645 biolink:NamedThing Golgi localization Any process in which the Golgi is transported to, and/or maintained in, a specific location within the cell. NMDCO_relaxed.owl GO:0051648 biolink:NamedThing vesicle localization Any process in which a vesicle or vesicles are transported to, and/or maintained in, a specific location. NMDCO_relaxed.owl GO:0051668 biolink:NamedThing localization within membrane Any process in which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a membrane. NMDCO_relaxed.owl GO:0051875 biolink:NamedThing pigment granule localization Any process in which a pigment granule is transported to, and/or maintained in, a specific location within the cell. NMDCO_relaxed.owl GO:1990849 biolink:NamedThing vacuolar localization Any process in which the vacuole is transported to, and/or maintained in, a specific location within the cell. NMDCO_relaxed.owl GO:0022853 biolink:NamedThing active monoatomic ion transmembrane transporter activity Enables the transfer of an ion from one side of a membrane to the other up the solute's concentration gradient. This is carried out by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction. NMDCO_relaxed.owl GO:0008356 biolink:NamedThing asymmetric cell division The asymmetric division of cells to produce two daughter cells with different developmental potentials. It is of fundamental significance for the generation of cell diversity. NMDCO_relaxed.owl GO:0010481 biolink:NamedThing epidermal cell division Any process resulting in the physical partitioning and separation of an epidermal cell, any of the cells making up the epidermis, into daughter cells. NMDCO_relaxed.owl GO:0014872 biolink:NamedThing myoblast division The process resulting in the physical partitioning and separation of a myoblast into daughter cells. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers. NMDCO_relaxed.owl GO:0040016 biolink:NamedThing embryonic cleavage The first few specialized divisions of an activated animal egg. NMDCO_relaxed.owl GO:0055057 biolink:NamedThing neuroblast division The process resulting in the physical partitioning and separation of a neuroblast into daughter cells. A neuroblast is any cell that will divide and give rise to a neuron. NMDCO_relaxed.owl GO:0120251 biolink:NamedThing hydrocarbon biosynthetic process NMDCO_relaxed.owl GO:0043447 biolink:NamedThing alkane biosynthetic process NMDCO_relaxed.owl GO:0009061 biolink:NamedThing anaerobic respiration NMDCO_relaxed.owl GO:0035592 biolink:NamedThing establishment of protein localization to extracellular region The directed movement of a protein to a specific location within the extracellular region. NMDCO_relaxed.owl GO:0071692 biolink:NamedThing protein localization to extracellular region Any process in which a protein is transported from one specific location in the extracellular region to another, or maintained in a specific extracellular location. NMDCO_relaxed.owl GO:0009314 biolink:NamedThing response to radiation Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation. NMDCO_relaxed.owl GO:0009582 biolink:NamedThing detection of abiotic stimulus The series of events in which an (non-living) abiotic stimulus is received by a cell and converted into a molecular signal. NMDCO_relaxed.owl GO:0051602 biolink:NamedThing response to electrical stimulus Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus. NMDCO_relaxed.owl GO:0009581 biolink:NamedThing detection of external stimulus The series of events in which an external stimulus is received by a cell and converted into a molecular signal. NMDCO_relaxed.owl GO:0043207 biolink:NamedThing response to external biotic stimulus Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things. NMDCO_relaxed.owl GO:0062149 biolink:NamedThing detection of stimulus involved in sensory perception of pain The series of events involved in the perception of pain in which a stimulus is received and converted into a molecular signal. NMDCO_relaxed.owl GO:0009583 biolink:NamedThing detection of light stimulus The series of events in which a light stimulus (in the form of photons) is received and converted into a molecular signal. NMDCO_relaxed.owl GO:0050981 biolink:NamedThing detection of electrical stimulus The series of events by which an electrical stimulus is received and converted into a molecular signal. NMDCO_relaxed.owl GO:0050908 biolink:NamedThing detection of light stimulus involved in visual perception The series of events involved in visual perception in which a light stimulus is received and converted into a molecular signal. NMDCO_relaxed.owl GO:0009725 biolink:NamedThing response to hormone Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus. NMDCO_relaxed.owl GO:0010160 biolink:NamedThing formation of animal organ boundary The regionalization process that specifies animal organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues. NMDCO_relaxed.owl GO:0021532 biolink:NamedThing neural tube patterning The regionalization process that regulates the coordinated growth that establishes the non-random spatial arrangement of the neural tube. NMDCO_relaxed.owl GO:0060897 biolink:NamedThing neural plate regionalization The pattern specification process that results in the subdivision of an axis or axes of the neural plate in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment. NMDCO_relaxed.owl GO:1900115 biolink:NamedThing extracellular regulation of signal transduction Any regulation of signal transduction that takes place in the extracellular region. NMDCO_relaxed.owl GO:0010070 biolink:NamedThing zygote asymmetric cell division The division of the zygote into two daughter cells that will adopt developmentally distinct potentials. NMDCO_relaxed.owl GO:0048132 biolink:NamedThing female germ-line stem cell asymmetric division The self-renewing division of a germline stem cell in the female gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the female gametes. NMDCO_relaxed.owl GO:0055059 biolink:NamedThing asymmetric neuroblast division The process resulting in the physical partitioning and separation of a neuroblast into two daughter cells with different developmental potentials. NMDCO_relaxed.owl GO:0098722 biolink:NamedThing asymmetric stem cell division Division of a stem cell during which it retains its identity and buds off a daughter cell with a new identity. NMDCO_relaxed.owl GO:0098728 biolink:NamedThing germline stem cell asymmetric division The self-renewing division of a germline stem cell, to produce a daughter stem cell and a daughter germ cell which will divide to form one or more gametes. NMDCO_relaxed.owl GO:0040034 biolink:NamedThing regulation of development, heterochronic Any process that modulates the consistent predetermined time point at which an integrated living unit or organism progresses from an initial condition to a later condition and the rate at which this time point is reached. NMDCO_relaxed.owl GO:0045165 biolink:NamedThing cell fate commitment The cellular developmental process by which a cell establishes the intrinsic character of a cell or tissue region irreversibly committing it to a particular fate. NMDCO_relaxed.owl GO:0010938 biolink:NamedThing cytoplasmic microtubule depolymerization The removal of tubulin heterodimers from one or both ends of a cytoplasmic microtubule. NMDCO_relaxed.owl GO:0060404 biolink:NamedThing axonemal microtubule depolymerization The removal of tubulin heterodimers from one or both ends of an axonemal microtubule. An axonemal microtubule is a microtubule in the axoneme of a cilium or flagellum; an axoneme contains nine modified doublet microtubules surrounding a pair of single microtubules. NMDCO_relaxed.owl GO:0099098 biolink:NamedThing microtubule polymerization based movement The movement of a cellular component as a result of microtubule polymerization. NMDCO_relaxed.owl GO:0014860 biolink:NamedThing neurotransmitter secretion involved in regulation of skeletal muscle contraction The regulated release of neurotransmitter into the synaptic cleft involved in skeletal muscle contraction. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin. NMDCO_relaxed.owl GO:0043501 biolink:NamedThing skeletal muscle adaptation Any process in which skeletal muscles change their phenotypic profiles in response to altered functional demands and a variety of signals. NMDCO_relaxed.owl GO:0014805 biolink:NamedThing smooth muscle adaptation Any process in which smooth muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. NMDCO_relaxed.owl GO:0014887 biolink:NamedThing cardiac muscle adaptation The process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. NMDCO_relaxed.owl GO:0014888 biolink:NamedThing striated muscle adaptation Any process in which striated muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities. NMDCO_relaxed.owl GO:0014821 biolink:NamedThing phasic smooth muscle contraction A process in which force is generated within phasic smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the phasic smooth muscle, the muscle contraction occurs without an ordered sarcomeric structure. Phasic smooth muscle contraction occurs in a series of discrete contractions and relaxations. NMDCO_relaxed.owl GO:0014831 biolink:NamedThing gastro-intestinal system smooth muscle contraction A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the gastro-intestinal system. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The gastro-intestinal system generally refers to the digestive structures stretching from the mouth to anus, but does not include the accessory glandular organs (liver, pancreas and biliary tract). NMDCO_relaxed.owl GO:1990765 biolink:NamedThing colon smooth muscle contraction A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry of the large intestine, exclusive of the rectum. The colon is that part of the large intestine that connects the small intestine to the rectum. NMDCO_relaxed.owl GO:1990770 biolink:NamedThing small intestine smooth muscle contraction A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry in the intestine between the stomach and the large intestine. NMDCO_relaxed.owl GO:0014827 biolink:NamedThing intestine smooth muscle contraction A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the intestine. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The intestine is the section of the alimentary canal from the stomach to the anal canal. It includes the large intestine and small intestine. NMDCO_relaxed.owl GO:0030432 biolink:NamedThing peristalsis A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards. NMDCO_relaxed.owl GO:0014852 biolink:NamedThing regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction Any process that modulates the frequency, rate or extent of skeletal muscle contraction by variation of the pattern of stimulation by nervous system. NMDCO_relaxed.owl GO:0014878 biolink:NamedThing response to electrical stimulus involved in regulation of muscle adaptation Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus. This process occurs as part of the regulation of muscle adaptation. NMDCO_relaxed.owl GO:0014879 biolink:NamedThing detection of electrical stimulus involved in regulation of muscle adaptation The series of events by which an electrical stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation. NMDCO_relaxed.owl GO:0050963 biolink:NamedThing detection of electrical stimulus involved in sensory perception The series of events in which an electrical stimulus is received by a cell and converted into a molecular signal as part of sensory perception. NMDCO_relaxed.owl GO:0050964 biolink:NamedThing detection of electrical stimulus involved in electroception The series of events that contribute to electroception in which an electrical stimulus is received and converted into a molecular signal. NMDCO_relaxed.owl GO:0050967 biolink:NamedThing detection of electrical stimulus involved in sensory perception of pain The series of events that contribute to the perception of pain in which an electrical stimulus is received and converted into a molecular signal. NMDCO_relaxed.owl GO:0033365 biolink:NamedThing protein localization to organelle A process in which a protein is transported to, or maintained in, a location within an organelle. NMDCO_relaxed.owl GO:0033366 biolink:NamedThing protein localization to secretory granule A process in which a protein is transported to, or maintained in, a location within a secretory granule. NMDCO_relaxed.owl GO:0034067 biolink:NamedThing protein localization to Golgi apparatus A process in which a protein is transported to, or maintained in, a location within the Golgi apparatus. NMDCO_relaxed.owl GO:0034502 biolink:NamedThing protein localization to chromosome Any process in which a protein is transported to, or maintained at, a specific location on a chromosome. NMDCO_relaxed.owl GO:0034504 biolink:NamedThing protein localization to nucleus A process in which a protein transports or maintains the localization of another protein to the nucleus. NMDCO_relaxed.owl GO:0035372 biolink:NamedThing protein localization to microtubule A process in which a protein is transported to, or maintained at, a microtubule. NMDCO_relaxed.owl GO:0035418 biolink:NamedThing protein localization to synapse Any process in which a protein is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. NMDCO_relaxed.owl GO:0044380 biolink:NamedThing protein localization to cytoskeleton A process in which a protein is transported to, or maintained in, a location within the cytoskeleton. NMDCO_relaxed.owl GO:0061512 biolink:NamedThing protein localization to cilium A process in which a protein is transported to, or maintained in, a location within a cilium. NMDCO_relaxed.owl GO:0061938 biolink:NamedThing protein localization to somatodendritic compartment A process in which a protein is transported to or maintained in a location within the somatodendritic compartment. NMDCO_relaxed.owl GO:0062237 biolink:NamedThing protein localization to postsynapse Any process in which a protein is transported to, and/or maintained at the postsynapse, the part of a synapse that is part of the post-synaptic cell. NMDCO_relaxed.owl GO:0071168 biolink:NamedThing protein localization to chromatin Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into chromatin. NMDCO_relaxed.owl GO:0072657 biolink:NamedThing protein localization to membrane A process in which a protein is transported to, or maintained in, a specific location in a membrane. NMDCO_relaxed.owl GO:0072659 biolink:NamedThing protein localization to plasma membrane A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane. NMDCO_relaxed.owl GO:0072665 biolink:NamedThing protein localization to vacuole A process in which a protein is transported to, or maintained at, a location in a vacuole. NMDCO_relaxed.owl GO:0072697 biolink:NamedThing protein localization to cell cortex A process in which a protein is transported to, or maintained in, the cell cortex. NMDCO_relaxed.owl GO:0072698 biolink:NamedThing protein localization to microtubule cytoskeleton A cellular protein localization process in which a protein is transported to, or maintained at, a location within the microtubule cytoskeleton. NMDCO_relaxed.owl GO:0090435 biolink:NamedThing protein localization to nuclear envelope A process in which a protein is transported to, or maintained at, a location within a nuclear envelope. NMDCO_relaxed.owl GO:0097355 biolink:NamedThing protein localization to heterochromatin Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into heterochromatin. NMDCO_relaxed.owl GO:0150105 biolink:NamedThing protein localization to cell-cell junction A process in which a protein is transported to, or maintained, in a location within a cell-cell junction. NMDCO_relaxed.owl GO:1902414 biolink:NamedThing protein localization to cell junction A process in which a protein is transported to, or maintained in, a location within a cell junction. NMDCO_relaxed.owl GO:1902463 biolink:NamedThing protein localization to cell leading edge A process in which a protein is transported to, or maintained in, a location within a cell leading edge. NMDCO_relaxed.owl GO:1902570 biolink:NamedThing protein localization to nucleolus A process in which a protein is transported to, or maintained in, a location within a nucleolus. NMDCO_relaxed.owl GO:1903119 biolink:NamedThing protein localization to actin cytoskeleton A process in which a protein is transported to, or maintained in, the location of an actin cytoskeleton. NMDCO_relaxed.owl GO:1903120 biolink:NamedThing protein localization to actin filament bundle A process in which a protein is transported to, or maintained in, the location of an actin filament bundle. NMDCO_relaxed.owl GO:1903292 biolink:NamedThing protein localization to Golgi membrane A process in which a protein is transported to, or maintained in, a location within a Golgi membrane. NMDCO_relaxed.owl GO:1903441 biolink:NamedThing protein localization to ciliary membrane A process in which a protein is transported to, or maintained in, a location within a ciliary membrane. NMDCO_relaxed.owl GO:1903778 biolink:NamedThing protein localization to vacuolar membrane A process in which a protein is transported to, or maintained in, a location within a vacuolar membrane. NMDCO_relaxed.owl GO:1904106 biolink:NamedThing protein localization to microvillus A process in which a protein is transported to, or maintained in, a location within a microvillus. NMDCO_relaxed.owl GO:1904491 biolink:NamedThing protein localization to ciliary transition zone A process in which a protein is transported to, or maintained in, a location within a ciliary transition zone. NMDCO_relaxed.owl GO:1905383 biolink:NamedThing protein localization to presynapse A process in which a protein is transported to, or maintained in, a location within a presynapse. NMDCO_relaxed.owl GO:1905755 biolink:NamedThing protein localization to cytoplasmic microtubule A process in which a protein is transported to, or maintained in, a location within a cytoplasmic microtubule. NMDCO_relaxed.owl GO:1990778 biolink:NamedThing protein localization to cell periphery A process in which a protein is transported to, or maintained in, the cell periphery. NMDCO_relaxed.owl GO:0061951 biolink:NamedThing establishment of protein localization to plasma membrane The directed movement of a protein to a specific location in a plasma membrane. NMDCO_relaxed.owl GO:0070199 biolink:NamedThing establishment of protein localization to chromosome The directed movement of a protein to a specific location on a chromosome. NMDCO_relaxed.owl GO:0071169 biolink:NamedThing establishment of protein localization to chromatin The directed movement of a protein to a part of a chromosome that is organized into chromatin. NMDCO_relaxed.owl GO:0072594 biolink:NamedThing establishment of protein localization to organelle The directed movement of a protein to a specific location on or in an organelle. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle. NMDCO_relaxed.owl GO:0072666 biolink:NamedThing establishment of protein localization to vacuole The directed movement of a protein to a specific location in a vacuole. NMDCO_relaxed.owl GO:0090150 biolink:NamedThing establishment of protein localization to membrane The directed movement of a protein to a specific location in a membrane. NMDCO_relaxed.owl GO:0051119 biolink:NamedThing sugar transmembrane transporter activity Enables the transfer of a sugar from one side of a membrane to the other. A sugar is any member of a class of sweet, water-soluble, crystallizable carbohydrates, which are the monosaccharides and smaller oligosaccharides. NMDCO_relaxed.owl GO:0015629 biolink:NamedThing actin cytoskeleton The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes. NMDCO_relaxed.owl GO:0099569 biolink:NamedThing presynaptic cytoskeleton The portion of the cytoskeleton contained within the presynapse. NMDCO_relaxed.owl GO:0099571 biolink:NamedThing postsynaptic cytoskeleton The portion of the cytoskeleton contained within the postsynapse. NMDCO_relaxed.owl GO:0015947 biolink:NamedThing methane metabolic process NMDCO_relaxed.owl GO:0015975 biolink:NamedThing energy derivation by oxidation of reduced inorganic compounds NMDCO_relaxed.owl GO:0019410 biolink:NamedThing aerobic respiration, using carbon monoxide as electron donor NMDCO_relaxed.owl GO:0019411 biolink:NamedThing aerobic respiration, using ferrous ions as electron donor NMDCO_relaxed.owl GO:0019412 biolink:NamedThing aerobic respiration, using hydrogen as electron donor NMDCO_relaxed.owl GO:0019414 biolink:NamedThing aerobic respiration, using sulfur or sulfate as electron donor NMDCO_relaxed.owl GO:0043554 biolink:NamedThing aerobic respiration, using arsenite as electron donor NMDCO_relaxed.owl GO:0022900 biolink:NamedThing electron transport chain NMDCO_relaxed.owl GO:0044085 biolink:NamedThing cellular component biogenesis A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. NMDCO_relaxed.owl GO:0016772 biolink:NamedThing transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). NMDCO_relaxed.owl GO:0016310 biolink:NamedThing phosphorylation The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide. NMDCO_relaxed.owl GO:0016740 biolink:NamedThing transferase activity Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. NMDCO_relaxed.owl GO:0016787 biolink:NamedThing hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. NMDCO_relaxed.owl GO:0140096 biolink:NamedThing catalytic activity, acting on a protein Catalytic activity that acts to modify a protein. NMDCO_relaxed.owl GO:0140098 biolink:NamedThing catalytic activity, acting on RNA Catalytic activity that acts to modify RNA, driven by ATP hydrolysis. NMDCO_relaxed.owl GO:0140103 biolink:NamedThing catalytic activity, acting on a glycoprotein Catalysis of a biochemical reaction at physiological temperatures in which one of the substrates is a glycoprotein. NMDCO_relaxed.owl GO:0140640 biolink:NamedThing catalytic activity, acting on a nucleic acid Catalytic activity that acts to modify a nucleic acid. NMDCO_relaxed.owl GO:0017085 biolink:NamedThing response to insecticide Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insecticide stimulus. Insecticides are chemicals used to kill insects. NMDCO_relaxed.owl GO:0017126 biolink:NamedThing nucleologenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells. NMDCO_relaxed.owl GO:0022613 biolink:NamedThing ribonucleoprotein complex biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a complex containing RNA and proteins. Includes the biosynthesis of the constituent RNA and protein molecules, and those macromolecular modifications that are involved in synthesis or assembly of the ribonucleoprotein complex. NMDCO_relaxed.owl GO:0044091 biolink:NamedThing membrane biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a membrane. NMDCO_relaxed.owl GO:0101025 biolink:NamedThing nuclear membrane biogenesis The process in which a nuclear membrane is synthesized, aggregates, and bonds together. NMDCO_relaxed.owl GO:0140112 biolink:NamedThing extracellular vesicle biogenesis The assembly and secretion a set of components to form an extracellular vesicule, a membrane-bounded vesicle that is released into the extracellular region. Extracellular vesicles include exosomes, microvesicles and apoptotic bodies, based on the mechanism by which they are released from cells and differentiated based on their size and content. NMDCO_relaxed.owl GO:0019228 biolink:NamedThing neuronal action potential An action potential that occurs in a neuron. NMDCO_relaxed.owl GO:0086001 biolink:NamedThing cardiac muscle cell action potential An action potential that occurs in a cardiac muscle cell. NMDCO_relaxed.owl GO:0086015 biolink:NamedThing SA node cell action potential An action potential that occurs in a sinoatrial node cardiac muscle cell. NMDCO_relaxed.owl GO:0086016 biolink:NamedThing AV node cell action potential An action potential that occurs in an atrioventricular node cardiac muscle cell. NMDCO_relaxed.owl GO:0086017 biolink:NamedThing Purkinje myocyte action potential An action potential that occurs in a Purkinje myocyte. NMDCO_relaxed.owl GO:0019646 biolink:NamedThing aerobic electron transport chain NMDCO_relaxed.owl GO:0022904 biolink:NamedThing respiratory electron transport chain NMDCO_relaxed.owl GO:0019725 biolink:NamedThing cellular homeostasis Any process involved in the maintenance of an internal steady state at the level of the cell. NMDCO_relaxed.owl GO:0019953 biolink:NamedThing sexual reproduction A type of reproduction that combines the genetic material of two gametes (such as a sperm or egg cell or fungal spores). The gametes have an haploid genome (with a single set of chromosomes, the product of a meiotic division) and combines with one another to produce a zygote (diploid). NMDCO_relaxed.owl GO:0022009 biolink:NamedThing central nervous system vasculogenesis The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes in the central nervous system. The capillary endothelial cells in the brain are specialized to form the blood-brain barrier. NMDCO_relaxed.owl GO:0060979 biolink:NamedThing vasculogenesis involved in coronary vascular morphogenesis The differentiation of endothelial cells from progenitor cells that contributes to blood vessel development in the heart, and the de novo formation of blood vessels and tubes. NMDCO_relaxed.owl GO:0061148 biolink:NamedThing extracellular matrix organization involved in endocardium development A process which results in the assembly, arrangement of constituent parts, or disassembly of an extracellular matrix of the endocardium. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers. NMDCO_relaxed.owl GO:0051258 biolink:NamedThing protein polymerization The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein. NMDCO_relaxed.owl GO:0023019 biolink:NamedThing signal transduction involved in regulation of gene expression Any process that modulates the frequency, rate or extent of gene expression as a consequence of a process in which a signal is released and/or conveyed from one location to another. NMDCO_relaxed.owl GO:0035556 biolink:NamedThing intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell. NMDCO_relaxed.owl GO:0097190 biolink:NamedThing apoptotic signaling pathway The series of molecular signals which triggers the apoptotic death of a cell. The pathway starts with reception of a signal, and ends when the execution phase of apoptosis is triggered. NMDCO_relaxed.owl GO:0098926 biolink:NamedThing postsynaptic signal transduction Signal transduction in which the initial step occurs in a postsynapse. NMDCO_relaxed.owl GO:0098928 biolink:NamedThing presynaptic signal transduction Signal transduction in which the initial step occurs in a presynapse. NMDCO_relaxed.owl GO:0045196 biolink:NamedThing establishment or maintenance of neuroblast polarity Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system. NMDCO_relaxed.owl GO:0030016 biolink:NamedThing myofibril The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism. NMDCO_relaxed.owl GO:0030485 biolink:NamedThing smooth muscle contractile fiber The contractile fiber of smooth muscle cells. NMDCO_relaxed.owl GO:0030048 biolink:NamedThing actin filament-based movement Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins. NMDCO_relaxed.owl GO:0031022 biolink:NamedThing nuclear migration along microfilament The directed movement of the nucleus along microfilaments within the cell, mediated by motor proteins. NMDCO_relaxed.owl GO:0060986 biolink:NamedThing endocrine hormone secretion The regulated release of a hormone into the circulatory system. NMDCO_relaxed.owl GO:0070382 biolink:NamedThing exocytic vesicle A transport vesicle that mediates transport from an intracellular compartment to the plasma membrane, and fuses with the plasma membrane to release various cargo molecules, such as proteins or hormones, by exocytosis. NMDCO_relaxed.owl GO:0030262 biolink:NamedThing apoptotic nuclear changes Alterations undergone by nuclei at the molecular and morphological level as part of the execution phase of apoptosis. NMDCO_relaxed.owl GO:0140734 biolink:NamedThing ammonium excretion The elimination of ammonium ions from an excretory cell. NMDCO_relaxed.owl GO:0030473 biolink:NamedThing nuclear migration along microtubule The directed movement of the nucleus along microtubules within the cell, mediated by motor proteins. NMDCO_relaxed.owl GO:0035190 biolink:NamedThing syncytial nuclear migration The directed movement of nuclei within the syncytial embryo of insects. These precise temporal and spatial patterns of nuclear movement are coordinated with mitotic divisons and are required during blastoderm formation to reposition dividing nuclei from the interior of the syncytial embryo to the cortex. NMDCO_relaxed.owl GO:0031076 biolink:NamedThing embryonic camera-type eye development The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure. NMDCO_relaxed.owl GO:0031012 biolink:NamedThing extracellular matrix A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues. NMDCO_relaxed.owl GO:0042588 biolink:NamedThing zymogen granule A membrane-bounded, cytoplasmic secretory granule found in enzyme-secreting cells and visible by light microscopy. Contain zymogen, an inactive enzyme precursor, often of a digestive enzyme. NMDCO_relaxed.owl GO:0031175 biolink:NamedThing neuron projection development The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites). NMDCO_relaxed.owl GO:0097060 biolink:NamedThing synaptic membrane A specialized area of membrane on either the presynaptic or the postsynaptic side of a synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. NMDCO_relaxed.owl GO:1903561 biolink:NamedThing extracellular vesicle Any vesicle that is part of the extracellular region. NMDCO_relaxed.owl GO:0031594 biolink:NamedThing neuromuscular junction The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential. NMDCO_relaxed.owl GO:0045202 biolink:NamedThing synapse The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane. NMDCO_relaxed.owl GO:0098523 biolink:NamedThing neuromuscular junction of myotube A neuromuscular junction in which the target muscle cell is a myotube. NMDCO_relaxed.owl GO:0098981 biolink:NamedThing cholinergic synapse A synapse that uses acetylcholine as a neurotransmitter. NMDCO_relaxed.owl GO:0031987 biolink:NamedThing locomotion involved in locomotory behavior Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement. NMDCO_relaxed.owl GO:0099170 biolink:NamedThing postsynaptic modulation of chemical synaptic transmission Any process, acting in the postsynapse that results in modulation of chemical synaptic transmission. NMDCO_relaxed.owl GO:0099171 biolink:NamedThing presynaptic modulation of chemical synaptic transmission Any process, acting in the presynapse that results in modulation of chemical synaptic transmission. NMDCO_relaxed.owl GO:0099550 biolink:NamedThing trans-synaptic signaling, modulating synaptic transmission Cell-cell signaling between presynapse and postsynapse, across the synaptic cleft, that modulates the synaptic transmission properties of the synapse. NMDCO_relaxed.owl GO:0099738 biolink:NamedThing cell cortex region The complete extent of cell cortex that underlies some some region of the plasma membrane. NMDCO_relaxed.owl GO:0048066 biolink:NamedThing developmental pigmentation The developmental process that results in the deposition of coloring matter in an organism, tissue or cell. NMDCO_relaxed.owl GO:0140056 biolink:NamedThing organelle localization by membrane tethering The process by which an organelle membrane interacts with another membrane via molecular tethers that physically bridge the two membranes and attach them to each other. NMDCO_relaxed.owl GO:1902358 biolink:NamedThing sulfate transmembrane transport The directed movement of sulfate across a membrane. NMDCO_relaxed.owl GO:0046666 biolink:NamedThing retinal cell programmed cell death Programmed cell death that occurs in the developing retina. NMDCO_relaxed.owl GO:0035735 biolink:NamedThing intraciliary transport involved in cilium assembly The bidirectional movement of large protein complexes along microtubules within a cilium that contributes to cilium assembly. NMDCO_relaxed.owl GO:0035805 biolink:NamedThing egg coat A specialized extracellular matrix that surrounds the plasma membrane of the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development. NMDCO_relaxed.owl GO:0043931 biolink:NamedThing ossification involved in bone maturation The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone, involved in the progression of the skeleton from its formation to its mature state. NMDCO_relaxed.owl GO:0048699 biolink:NamedThing generation of neurons The process in which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons. NMDCO_relaxed.owl GO:0099575 biolink:NamedThing regulation of protein catabolic process at presynapse, modulating synaptic transmission Any process that modulates synaptic transmission by regulating a catabolic process occurring at a presynapse. NMDCO_relaxed.owl GO:0099576 biolink:NamedThing regulation of protein catabolic process at postsynapse, modulating synaptic transmission Any process that modulates synaptic transmission by regulating a catabolic process occurring at a postsynapse. NMDCO_relaxed.owl GO:0042254 biolink:NamedThing ribosome biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis. NMDCO_relaxed.owl GO:0042402 biolink:NamedThing cellular biogenic amine catabolic process The chemical reactions and pathways occurring at the level of individual cells resulting in the breakdown of biogenic amines, any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters. NMDCO_relaxed.owl GO:0043025 biolink:NamedThing neuronal cell body The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites. NMDCO_relaxed.owl GO:0043228 biolink:NamedThing non-membrane-bounded organelle Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes. NMDCO_relaxed.owl GO:0043229 biolink:NamedThing intracellular organelle Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. NMDCO_relaxed.owl GO:0043230 biolink:NamedThing extracellular organelle Organized structure of distinctive morphology and function, occurring outside the cell. Includes, for example, extracellular membrane vesicles (EMVs) and the cellulosomes of anaerobic bacteria and fungi. NMDCO_relaxed.owl GO:0043264 biolink:NamedThing extracellular non-membrane-bounded organelle Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring outside the cell. NMDCO_relaxed.owl GO:0099512 biolink:NamedThing supramolecular fiber A polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure. NMDCO_relaxed.owl GO:0071953 biolink:NamedThing elastic fiber An supramolecular fiber that consists of an insoluble core of polymerized tropoelastin monomers and a surrounding mantle of microfibrils. Elastic fibers provide elasticity and recoiling to tissues and organs, and maintain structural integrity against mechanical strain. NMDCO_relaxed.owl GO:0098643 biolink:NamedThing banded collagen fibril A supramolecular assembly of fibrillar collagen complexes in the form of a long fiber (fibril) with transverse striations (bands). NMDCO_relaxed.owl GO:0044207 biolink:NamedThing translation initiation ternary complex A ribonucleoprotein complex that contains aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator). NMDCO_relaxed.owl GO:0046545 biolink:NamedThing development of primary female sexual characteristics The process whose specific outcome is the progression of the primary female sexual characteristics over time, from their formation to the mature structure. The primary female sexual characteristics are the ovaries, and they develop in response to sex hormone secretion. NMDCO_relaxed.owl GO:0046660 biolink:NamedThing female sex differentiation The establishment of the sex of a female organism by physical differentiation. NMDCO_relaxed.owl GO:0046667 biolink:NamedThing compound eye retinal cell programmed cell death Programmed cell death that occurs in the retina to remove excess cells between ommatidia, thus resulting in a hexagonal lattice, precise with respect to cell number and position surrounding each ommatidium. NMDCO_relaxed.owl GO:0046716 biolink:NamedThing muscle cell cellular homeostasis The cellular homeostatic process that preserves a muscle cell in a stable functional or structural state. NMDCO_relaxed.owl GO:0070050 biolink:NamedThing neuron cellular homeostasis The cellular homeostatic process that preserves a neuron in a stable, differentiated functional and structural state. NMDCO_relaxed.owl GO:0048199 biolink:NamedThing vesicle targeting, to, from or within Golgi The process in which vesicles are directed to specific destination membranes during transport to, from or within the Golgi apparatus; mediated by the addition of specific coat proteins, including COPI and COPII proteins and clathrin, to the membrane during vesicle formation. NMDCO_relaxed.owl GO:0048288 biolink:NamedThing nuclear membrane fusion involved in karyogamy The joining of 2 or more lipid bilayer membranes that surround the nucleus during the creation of a single nucleus from multiple nuclei. NMDCO_relaxed.owl GO:0048596 biolink:NamedThing embryonic camera-type eye morphogenesis The process in which the anatomical structures of the eye are generated and organized during embryonic development. NMDCO_relaxed.owl GO:0048755 biolink:NamedThing branching morphogenesis of a nerve The process in which the anatomical structures of branches in a nerve are generated and organized. This term refers to an anatomical structure (nerve) not a cell (neuron). NMDCO_relaxed.owl GO:0061114 biolink:NamedThing branching involved in pancreas morphogenesis The process in which the branches of the pancreas are generated and organized. NMDCO_relaxed.owl GO:0050881 biolink:NamedThing musculoskeletal movement The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system. NMDCO_relaxed.owl GO:0050956 biolink:NamedThing electroception The series of events required for an organism to receive an electrical stimulus, convert it to a molecular signal, and recognize and characterize the signal. Many fish possess an electroception sense; for example, the electric eel uses low voltage pulses of electricity for navigation and prey location. NMDCO_relaxed.owl GO:0051410 biolink:NamedThing detoxification of nitrogen compound Any process that reduces or removes the toxicity of nitrogenous compounds which are dangerous or toxic. This includes the aerobic conversion of toxic compounds to harmless substances. NMDCO_relaxed.owl GO:0061687 biolink:NamedThing detoxification of inorganic compound Any process that reduces or removes the toxicity of inorganic compounds. These include transport of such compounds away from sensitive areas and to compartments or complexes whose purpose is sequestration of inorganic compounds. NMDCO_relaxed.owl GO:0051905 biolink:NamedThing establishment of pigment granule localization The directed movement of a pigment granule to a specific location. NMDCO_relaxed.owl GO:1990182 biolink:NamedThing exosomal secretion The process whereby a membrane-bounded vesicle is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. NMDCO_relaxed.owl GO:0060581 biolink:NamedThing cell fate commitment involved in pattern specification The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells within a field of cells that will exhibit a certain pattern of differentiation. Positional information is established through protein signals that emanate from a localized source within a developmental field resulting in specification of a cell type. Those signals are then interpreted in a cell-autonomous manner resulting in the determination of the cell type. NMDCO_relaxed.owl GO:0060795 biolink:NamedThing cell fate commitment involved in formation of primary germ layer The commitment of cells to specific cell fates of the endoderm, ectoderm, or mesoderm as a part of gastrulation. NMDCO_relaxed.owl GO:0060350 biolink:NamedThing endochondral bone morphogenesis The process in which bones are generated and organized as a result of the conversion of initial cartilaginous anlage into bone. NMDCO_relaxed.owl GO:0061971 biolink:NamedThing replacement bone morphogenesis The process in which bones are generated and organized as a result of the conversion of another structural tissue into bone. NMDCO_relaxed.owl GO:0061972 biolink:NamedThing dermal bone morphogenesis The process in which bone which forms superficially in the organism are generated and organized. NMDCO_relaxed.owl GO:0061973 biolink:NamedThing membrane bone morphogenesis The process in which bone which forms deep in the organism are generated and organized. NMDCO_relaxed.owl GO:0060351 biolink:NamedThing cartilage development involved in endochondral bone morphogenesis The process whose specific outcome is the progression of the cartilage that will provide a scaffold for mineralization of endochondral bones. NMDCO_relaxed.owl GO:0060496 biolink:NamedThing mesenchymal-epithelial cell signaling involved in lung development Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell and contributes to the development of the lung. NMDCO_relaxed.owl GO:0061111 biolink:NamedThing epithelial-mesenchymal cell signaling involved in lung development Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell and contributes to the progression of the lung over time from its initial formation to the mature organ. NMDCO_relaxed.owl GO:0060916 biolink:NamedThing mesenchymal cell proliferation involved in lung development The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population that contributes to the progression of the lung over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets. NMDCO_relaxed.owl GO:0060978 biolink:NamedThing angiogenesis involved in coronary vascular morphogenesis Blood vessel formation in the heart when new vessels emerge from the proliferation of pre-existing blood vessels. NMDCO_relaxed.owl GO:0061308 biolink:NamedThing cardiac neural crest cell development involved in heart development The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the development of the heart. NMDCO_relaxed.owl GO:0061309 biolink:NamedThing cardiac neural crest cell development involved in outflow tract morphogenesis The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the shaping of the outflow tract. NMDCO_relaxed.owl GO:0061385 biolink:NamedThing fibroblast proliferation involved in heart morphogenesis The multiplication or reproduction of fibroblasts, resulting in the expansion of a fibroblast population that contributes to the shaping of the heart. NMDCO_relaxed.owl GO:1990234 biolink:NamedThing transferase complex A protein complex capable of catalyzing the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). NMDCO_relaxed.owl GO:0070062 biolink:NamedThing extracellular exosome A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm. NMDCO_relaxed.owl GO:0086018 biolink:NamedThing SA node cell to atrial cardiac muscle cell signaling Any process that mediates the transfer of information from an SA node cardiomyocyte to an atrial cardiomyocyte. NMDCO_relaxed.owl GO:0086027 biolink:NamedThing AV node cell to bundle of His cell signaling Any process that mediates the transfer of information from an AV node cardiac muscle cell to a bundle of His cardiomyocyte. NMDCO_relaxed.owl GO:0086070 biolink:NamedThing SA node cell to atrial cardiac muscle cell communication The process that mediates interactions between an SA node cardiomyocyte and its surroundings that contributes to the process of the SA node cardiomyocyte communicating with an atrial cardiomyocyte in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. NMDCO_relaxed.owl GO:0086067 biolink:NamedThing AV node cell to bundle of His cell communication The process that mediates interactions between an AV node cell and its surroundings that contributes to the process of the AV node cell communicating with a bundle of His cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. NMDCO_relaxed.owl GO:0086068 biolink:NamedThing Purkinje myocyte to ventricular cardiac muscle cell communication The process that mediates interactions between a Purkinje myocyte and its surroundings that contributes to the process of the Purkinje myocyte communicating with a ventricular cardiac muscle cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment. NMDCO_relaxed.owl GO:0090685 biolink:NamedThing RNA localization to nucleus A macromolecular localization process in which RNA is transported to and maintained in a location within the nucleus. NMDCO_relaxed.owl GO:1990280 biolink:NamedThing RNA localization to chromatin A process in which RNA is transported to and maintained in a part of a chromosome that is organized into chromatin. NMDCO_relaxed.owl GO:0097237 biolink:NamedThing cellular response to toxic substance Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus. NMDCO_relaxed.owl GO:0097512 biolink:NamedThing cardiac myofibril A cardiac myofibril is a myofibril specific to cardiac muscle cells. NMDCO_relaxed.owl GO:0098723 biolink:NamedThing skeletal muscle myofibril A myofibril of a skeletal muscle fiber. NMDCO_relaxed.owl GO:0097711 biolink:NamedThing ciliary basal body-plasma membrane docking The docking of a cytosolic centriole/basal body to the plasma membrane via the ciliary transition fibers. In some species this may happen via an intermediate step, by first docking to the ciliary vesicle via the ciliary transition fibers. The basal body-ciliary vesicle then relocates to the plasma membrane, followed by the ciliary vesicle fusing with the plasma membrane, effectively attaching the basal body to the plasma membrane. NMDCO_relaxed.owl GO:0097712 biolink:NamedThing vesicle targeting, trans-Golgi to periciliary membrane compartment The process in which vesicles formed at the trans-Golgi network are directed to the plasma membrane surrounding the base of the cilium, including the ciliary pocket, mediated by molecules at the vesicle membrane and target membrane surfaces. NMDCO_relaxed.owl GO:0097734 biolink:NamedThing extracellular exosome biogenesis The assembly and secretion of an extracellular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. NMDCO_relaxed.owl GO:0098645 biolink:NamedThing collagen network A supramolecular complex that consists of collagen triple helices associated to form a network. NMDCO_relaxed.owl GO:0099081 biolink:NamedThing supramolecular polymer A polymeric supramolecular structure. NMDCO_relaxed.owl GO:0098871 biolink:NamedThing postsynaptic actin cytoskeleton The actin cytoskeleton that is part of a postsynapse. NMDCO_relaxed.owl GO:0099143 biolink:NamedThing presynaptic actin cytoskeleton The actin cytoskeleton that is part of a presynapse. NMDCO_relaxed.owl GO:0099537 biolink:NamedThing trans-synaptic signaling Cell-cell signaling in either direction across the synaptic cleft. NMDCO_relaxed.owl GO:0098917 biolink:NamedThing retrograde trans-synaptic signaling Cell-cell signaling from post to pre-synapse, across the synaptic cleft. NMDCO_relaxed.owl GO:0098920 biolink:NamedThing retrograde trans-synaptic signaling by lipid Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a lipid ligand. NMDCO_relaxed.owl GO:0099082 biolink:NamedThing retrograde trans-synaptic signaling by neuropeptide Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a neuropeptide. NMDCO_relaxed.owl GO:0099083 biolink:NamedThing retrograde trans-synaptic signaling by neuropeptide, modulating synaptic transmission Modulation of synaptic transmittion by cell-cell signaling across the synaptic cleft from postsynapse to presynapse, mediated by a neuropeptide. NMDCO_relaxed.owl GO:0099157 biolink:NamedThing trans-synaptic signaling via exosome Transynaptic signaling in which the ligand is carried across the synapse by an exosome. NMDCO_relaxed.owl GO:0099540 biolink:NamedThing trans-synaptic signaling by neuropeptide Cell-cell signaling between presynapse and postsynapse mediated by a peptide ligand crossing the synaptic cleft. NMDCO_relaxed.owl GO:0099541 biolink:NamedThing trans-synaptic signaling by lipid Cell-cell signaling from post to pre-synapse, across the synaptic cleft, mediated by a lipid. NMDCO_relaxed.owl GO:0099551 biolink:NamedThing trans-synaptic signaling by neuropeptide, modulating synaptic transmission Cell-cell signaling between presynapse and postsynapse, via the vesicular release and reception of neuropeptide molecules, that modulates the synaptic transmission properties of the synapse. NMDCO_relaxed.owl GO:0099552 biolink:NamedThing trans-synaptic signaling by lipid, modulating synaptic transmission Cell-cell signaling between presynapse and postsynapse, via the release and reception of lipid molecules, that modulates the synaptic transmission properties of the synapse. NMDCO_relaxed.owl GO:0098992 biolink:NamedThing neuronal dense core vesicle A dense core vesicle (granule) that is part of a neuron. These vesicles typically contain neuropeptides. They can be found in all parts of neurons, including the soma, dendrites, axonal swellings (varicosities) and synaptic terminals. NMDCO_relaxed.owl GO:0099538 biolink:NamedThing synaptic signaling via neuropeptide Cell-cell signaling to or from a synapse, mediated by a peptide. NMDCO_relaxed.owl GO:0140236 biolink:NamedThing translation at presynapse Translation that occurs at the presynapse. NMDCO_relaxed.owl GO:0140237 biolink:NamedThing translation at presynapse, modulating chemical synaptic transmission Translation that occurs at the presynapse, and that modulates chemical synaptic transmission. NMDCO_relaxed.owl GO:0140241 biolink:NamedThing translation at synapse Translation that occurs at the synapse. NMDCO_relaxed.owl GO:0140242 biolink:NamedThing translation at postsynapse Translation that occurs at the postsynapse. NMDCO_relaxed.owl GO:0140961 biolink:NamedThing cellular detoxification of metal ion Any process carried out at the cellular level that reduces or removes the toxicity of a metal ion. NMDCO_relaxed.owl GO:0150063 biolink:NamedThing visual system development The process whose specific outcome is the progression of the visual system over time, from its formation to the mature structure, including the eye, parts of the central nervous system (CNS) involved in processing of visual inputs, and connecting nerve pathways. NMDCO_relaxed.owl GO:1900116 biolink:NamedThing extracellular negative regulation of signal transduction Any negative regulation of signal transduction that takes place in extracellular region. NMDCO_relaxed.owl GO:1901148 biolink:NamedThing gene expression involved in extracellular matrix organization Any gene expression that is involved in extracellular matrix organization. Gene expression includes both transcription to produce an RNA transcript, and the translation of that mRNA into protein. Protein maturation is included in gene expression when required to form an active form of a product from an inactive precursor form. NMDCO_relaxed.owl GO:1904269 biolink:NamedThing cell leading edge cell cortex The cell cortex of the leading edge of a cell. NMDCO_relaxed.owl GO:1905720 biolink:NamedThing cytoplasmic microtubule bundle Any microtubule bundle that is part of a cytoplasm. NMDCO_relaxed.owl GO:1990768 biolink:NamedThing gastric mucosal blood circulation The flow of blood through the gastric mucosa of an animal, enabling the transport of nutrients and the removal of waste products. NMDCO_relaxed.owl IAO:0000005 biolink:NamedThing objective specification A directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved. NMDCO_relaxed.owl IAO:0000007 biolink:NamedThing action specification A directive information entity that describes an action the bearer will take. NMDCO_relaxed.owl IAO:0000104 biolink:NamedThing plan specification A directive information entity with action specifications and objective specifications as parts that, when concretized, is realized in a process in which the bearer tries to achieve the objectives by taking the actions specified.|A directive information entity with action specifications and objective specifications as parts, and that may be concretized as a realizable entity that, if realized, is realized in a process in which the bearer tries to achieve the objectives by taking the actions specified. NMDCO_relaxed.owl IAO:0000032 biolink:NamedThing scalar measurement datum A scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label. NMDCO_relaxed.owl IAO:0000582 biolink:NamedThing time stamped measurement datum NMDCO_relaxed.owl IAO:0000078 biolink:NamedThing curation status specification The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value. NMDCO_relaxed.owl IAO:0000225 biolink:NamedThing obsolescence reason specification The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value. NMDCO_relaxed.owl IAO:0000409 biolink:NamedThing denotator type A denotator type indicates how a term should be interpreted from an ontological perspective. NMDCO_relaxed.owl IAO:0000584 biolink:NamedThing time sampled measurement data set A data set that is an aggregate of data recording some measurement at a number of time points. The time series data set is an ordered list of pairs of time measurement data and the corresponding measurement data acquired at that time. NMDCO_relaxed.owl NBO:0000001 biolink:NamedThing body part movement A change of place or position of part of an organism that does not involve the entire organism [NBO:SMAC] NMDCO_relaxed.owl NBO:0000338 biolink:NamedThing kinesthetic behavior "Movement behavior of the body or its parts." NMDCO_relaxed.owl NBO:0000007 biolink:NamedThing mouth movement The act of moving any of the tissues and hard structures surrounding the mouth other than teeth, jaws or filter structures [NBO:AC] NMDCO_relaxed.owl NBO:0000073 biolink:NamedThing chewing The act of repeated grinding, tearing, and or crushing with teeth or jaws [NBO:SMAC] NMDCO_relaxed.owl NBO:0000747 biolink:NamedThing jaw movement NMDCO_relaxed.owl NBO:0001786 biolink:NamedThing regulation of behavior "Any process that modulates the frequency, rate or extent of behavior, the specific actions or reactions of an organism in response to external or internal stimuli." [GO:0050795] NMDCO_relaxed.owl NCBITaxon:10066 biolink:NamedThing Muridae NMDCO_relaxed.owl NCBITaxon:337687 biolink:NamedThing Muroidea NMDCO_relaxed.owl NCBITaxon:10088 biolink:NamedThing Mus NMDCO_relaxed.owl NCBITaxon:39107 biolink:NamedThing Murinae NMDCO_relaxed.owl NCBITaxon:10114 biolink:NamedThing Rattus NMDCO_relaxed.owl NCBITaxon:10090 biolink:NamedThing Mus musculus NMDCO_relaxed.owl NCBITaxon:862507 biolink:NamedThing Mus NMDCO_relaxed.owl NCBITaxon:10239 biolink:NamedThing Viruses NMDCO_relaxed.owl NCBITaxon:2 biolink:NamedThing Bacteria NMDCO_relaxed.owl NCBITaxon:2157 biolink:NamedThing Archaea NMDCO_relaxed.owl NCBITaxon:104431 biolink:NamedThing Obtectomera NMDCO_relaxed.owl NCBITaxon:37567 biolink:NamedThing Ditrysia NMDCO_relaxed.owl NCBITaxon:105389 biolink:NamedThing Sedentaria NMDCO_relaxed.owl NCBITaxon:6341 biolink:NamedThing Polychaeta NMDCO_relaxed.owl NCBITaxon:105391 biolink:NamedThing Canalipalpata NMDCO_relaxed.owl NCBITaxon:106220 biolink:NamedThing Mytiloidea NMDCO_relaxed.owl NCBITaxon:6546 biolink:NamedThing Mytilida NMDCO_relaxed.owl NCBITaxon:110814 biolink:NamedThing Xenoturbellida NMDCO_relaxed.owl NCBITaxon:1312402 biolink:NamedThing Xenacoelomorpha NMDCO_relaxed.owl NCBITaxon:147099 biolink:NamedThing Acoelomorpha NMDCO_relaxed.owl NCBITaxon:110815 biolink:NamedThing Xenoturbella NMDCO_relaxed.owl NCBITaxon:1547233 biolink:NamedThing Xenoturbellidae NMDCO_relaxed.owl NCBITaxon:1117 biolink:NamedThing Cyanobacteria NMDCO_relaxed.owl NCBITaxon:1798711 biolink:NamedThing Cyanobacteria/Melainabacteria group NMDCO_relaxed.owl NCBITaxon:1118 biolink:NamedThing Chroococcales NMDCO_relaxed.owl NCBITaxon:1301283 biolink:NamedThing Oscillatoriophycideae NMDCO_relaxed.owl NCBITaxon:1150 biolink:NamedThing Oscillatoriales NMDCO_relaxed.owl NCBITaxon:1121 biolink:NamedThing Aphanothece NMDCO_relaxed.owl NCBITaxon:1890450 biolink:NamedThing Aphanothecaceae NMDCO_relaxed.owl NCBITaxon:1125 biolink:NamedThing Microcystis NMDCO_relaxed.owl NCBITaxon:1890449 biolink:NamedThing Microcystaceae NMDCO_relaxed.owl NCBITaxon:1126 biolink:NamedThing Microcystis aeruginosa NMDCO_relaxed.owl NCBITaxon:44822 biolink:NamedThing Microcystis viridis NMDCO_relaxed.owl NCBITaxon:1158 biolink:NamedThing Oscillatoria NMDCO_relaxed.owl NCBITaxon:1892254 biolink:NamedThing Oscillatoriaceae NMDCO_relaxed.owl NCBITaxon:1198 biolink:NamedThing Phormidium NMDCO_relaxed.owl NCBITaxon:28073 biolink:NamedThing Lyngbya NMDCO_relaxed.owl NCBITaxon:1161 biolink:NamedThing Nostocales NMDCO_relaxed.owl NCBITaxon:2881377 biolink:NamedThing Pseudanabaenales NMDCO_relaxed.owl NCBITaxon:1162 biolink:NamedThing Nostocaceae NMDCO_relaxed.owl NCBITaxon:1892259 biolink:NamedThing Aphanizomenonaceae NMDCO_relaxed.owl NCBITaxon:1892263 biolink:NamedThing Hapalosiphonaceae NMDCO_relaxed.owl NCBITaxon:1892265 biolink:NamedThing Gloeotrichiaceae NMDCO_relaxed.owl NCBITaxon:1163 biolink:NamedThing Anabaena NMDCO_relaxed.owl NCBITaxon:1177 biolink:NamedThing Nostoc NMDCO_relaxed.owl NCBITaxon:1164880 biolink:NamedThing Oedaleus senegalensis NMDCO_relaxed.owl NCBITaxon:227570 biolink:NamedThing Oedaleus NMDCO_relaxed.owl NCBITaxon:1175 biolink:NamedThing Aphanizomenon NMDCO_relaxed.owl NCBITaxon:198592 biolink:NamedThing Umezakia NMDCO_relaxed.owl NCBITaxon:77021 biolink:NamedThing Cylindrospermopsis NMDCO_relaxed.owl NCBITaxon:117558 biolink:NamedThing Bathymodiolinae NMDCO_relaxed.owl NCBITaxon:6547 biolink:NamedThing Mytilidae NMDCO_relaxed.owl NCBITaxon:301957 biolink:NamedThing Modiolinae NMDCO_relaxed.owl NCBITaxon:301959 biolink:NamedThing Mytilinae NMDCO_relaxed.owl NCBITaxon:117565 biolink:NamedThing Myxini NMDCO_relaxed.owl NCBITaxon:1476529 biolink:NamedThing Cyclostomata NMDCO_relaxed.owl NCBITaxon:117570 biolink:NamedThing Teleostomi NMDCO_relaxed.owl NCBITaxon:7776 biolink:NamedThing Gnathostomata NMDCO_relaxed.owl NCBITaxon:7777 biolink:NamedThing Chondrichthyes NMDCO_relaxed.owl NCBITaxon:117571 biolink:NamedThing Euteleostomi NMDCO_relaxed.owl NCBITaxon:119089 biolink:NamedThing Chromadorea NMDCO_relaxed.owl NCBITaxon:6231 biolink:NamedThing Nematoda NMDCO_relaxed.owl NCBITaxon:1205 biolink:NamedThing Trichodesmium NMDCO_relaxed.owl NCBITaxon:1892252 biolink:NamedThing Microcoleaceae NMDCO_relaxed.owl NCBITaxon:54304 biolink:NamedThing Planktothrix NMDCO_relaxed.owl NCBITaxon:1206794 biolink:NamedThing Ecdysozoa NMDCO_relaxed.owl NCBITaxon:33317 biolink:NamedThing Protostomia NMDCO_relaxed.owl NCBITaxon:2697495 biolink:NamedThing Spiralia NMDCO_relaxed.owl NCBITaxon:1206795 biolink:NamedThing Lophotrochozoa NMDCO_relaxed.owl NCBITaxon:124129 biolink:NamedThing Acipenserinae NMDCO_relaxed.owl NCBITaxon:7900 biolink:NamedThing Acipenseridae NMDCO_relaxed.owl NCBITaxon:124130 biolink:NamedThing Acipenserini NMDCO_relaxed.owl NCBITaxon:12965 biolink:NamedThing Bathymodiolus NMDCO_relaxed.owl NCBITaxon:13100 biolink:NamedThing Juniperus NMDCO_relaxed.owl NCBITaxon:3367 biolink:NamedThing Cupressaceae NMDCO_relaxed.owl NCBITaxon:13468 biolink:NamedThing Cupressus NMDCO_relaxed.owl NCBITaxon:131209 biolink:NamedThing Zygnemophyceae NMDCO_relaxed.owl NCBITaxon:131221 biolink:NamedThing Streptophytina NMDCO_relaxed.owl NCBITaxon:3193 biolink:NamedThing Embryophyta NMDCO_relaxed.owl NCBITaxon:35493 biolink:NamedThing Streptophyta NMDCO_relaxed.owl NCBITaxon:33213 biolink:NamedThing Bilateria NMDCO_relaxed.owl NCBITaxon:33511 biolink:NamedThing Deuterostomia NMDCO_relaxed.owl NCBITaxon:1316646 biolink:NamedThing Salicornioideae NMDCO_relaxed.owl NCBITaxon:1804623 biolink:NamedThing Chenopodiaceae NMDCO_relaxed.owl NCBITaxon:1329799 biolink:NamedThing Archelosauria NMDCO_relaxed.owl NCBITaxon:32561 biolink:NamedThing Sauria NMDCO_relaxed.owl NCBITaxon:133551 biolink:NamedThing Eleutherozoa NMDCO_relaxed.owl NCBITaxon:7586 biolink:NamedThing Echinodermata NMDCO_relaxed.owl NCBITaxon:1338369 biolink:NamedThing Dipnotetrapodomorpha NMDCO_relaxed.owl NCBITaxon:8287 biolink:NamedThing Sarcopterygii NMDCO_relaxed.owl NCBITaxon:2605435 biolink:NamedThing Evosea NMDCO_relaxed.owl NCBITaxon:1437010 biolink:NamedThing Boreoeutheria NMDCO_relaxed.owl NCBITaxon:9347 biolink:NamedThing Eutheria NMDCO_relaxed.owl NCBITaxon:1437180 biolink:NamedThing Acrogymnospermae NMDCO_relaxed.owl NCBITaxon:58024 biolink:NamedThing Spermatophyta NMDCO_relaxed.owl NCBITaxon:3398 biolink:NamedThing Magnoliopsida NMDCO_relaxed.owl NCBITaxon:1437183 biolink:NamedThing Mesangiospermae NMDCO_relaxed.owl NCBITaxon:1437197 biolink:NamedThing Petrosaviidae NMDCO_relaxed.owl NCBITaxon:4447 biolink:NamedThing Liliopsida NMDCO_relaxed.owl NCBITaxon:1437201 biolink:NamedThing Pentapetalae NMDCO_relaxed.owl NCBITaxon:91827 biolink:NamedThing Gunneridae NMDCO_relaxed.owl NCBITaxon:1445966 biolink:NamedThing Gnetidae NMDCO_relaxed.owl NCBITaxon:3372 biolink:NamedThing Gnetopsida NMDCO_relaxed.owl NCBITaxon:1446379 biolink:NamedThing Cupressales NMDCO_relaxed.owl NCBITaxon:2821351 biolink:NamedThing Conifers II NMDCO_relaxed.owl NCBITaxon:147537 biolink:NamedThing Saccharomycotina NMDCO_relaxed.owl NCBITaxon:716545 biolink:NamedThing saccharomyceta NMDCO_relaxed.owl NCBITaxon:147554 biolink:NamedThing Schizosaccharomycetes NMDCO_relaxed.owl NCBITaxon:451866 biolink:NamedThing Taphrinomycotina NMDCO_relaxed.owl NCBITaxon:1489341 biolink:NamedThing Osteoglossocephalai NMDCO_relaxed.owl NCBITaxon:32443 biolink:NamedThing Teleostei NMDCO_relaxed.owl NCBITaxon:1583079 biolink:NamedThing Erebinae NMDCO_relaxed.owl NCBITaxon:695564 biolink:NamedThing Erebidae NMDCO_relaxed.owl NCBITaxon:162985 biolink:NamedThing Hapalosiphon NMDCO_relaxed.owl NCBITaxon:169697 biolink:NamedThing Arecoideae NMDCO_relaxed.owl NCBITaxon:4710 biolink:NamedThing Arecaceae NMDCO_relaxed.owl NCBITaxon:169705 biolink:NamedThing Cocoseae NMDCO_relaxed.owl NCBITaxon:169729 biolink:NamedThing Elaeidinae NMDCO_relaxed.owl NCBITaxon:1783272 biolink:NamedThing Terrabacteria group NMDCO_relaxed.owl NCBITaxon:3524 biolink:NamedThing Caryophyllales NMDCO_relaxed.owl NCBITaxon:186622 biolink:NamedThing Acipenseroidei NMDCO_relaxed.owl NCBITaxon:7899 biolink:NamedThing Acipenseriformes NMDCO_relaxed.owl NCBITaxon:186623 biolink:NamedThing Actinopteri NMDCO_relaxed.owl NCBITaxon:7898 biolink:NamedThing Actinopterygii NMDCO_relaxed.owl NCBITaxon:186625 biolink:NamedThing Clupeocephala NMDCO_relaxed.owl NCBITaxon:186626 biolink:NamedThing Otophysi NMDCO_relaxed.owl NCBITaxon:32519 biolink:NamedThing Ostariophysi NMDCO_relaxed.owl NCBITaxon:186627 biolink:NamedThing Cypriniphysae NMDCO_relaxed.owl NCBITaxon:186634 biolink:NamedThing Otomorpha NMDCO_relaxed.owl NCBITaxon:1890440 biolink:NamedThing Schizotrichaceae NMDCO_relaxed.owl NCBITaxon:190523 biolink:NamedThing Laguncularia NMDCO_relaxed.owl NCBITaxon:3954 biolink:NamedThing Combretaceae NMDCO_relaxed.owl NCBITaxon:190524 biolink:NamedThing Laguncularia racemosa NMDCO_relaxed.owl NCBITaxon:1955150 biolink:NamedThing Acrididea NMDCO_relaxed.owl NCBITaxon:7001 biolink:NamedThing Caelifera NMDCO_relaxed.owl NCBITaxon:1963758 biolink:NamedThing Myomorpha NMDCO_relaxed.owl NCBITaxon:9989 biolink:NamedThing Rodentia NMDCO_relaxed.owl NCBITaxon:197562 biolink:NamedThing Pancrustacea NMDCO_relaxed.owl NCBITaxon:197563 biolink:NamedThing Mandibulata NMDCO_relaxed.owl NCBITaxon:6656 biolink:NamedThing Arthropoda NMDCO_relaxed.owl NCBITaxon:2058185 biolink:NamedThing Dictyosteliaceae NMDCO_relaxed.owl NCBITaxon:2058949 biolink:NamedThing Dictyosteliales NMDCO_relaxed.owl NCBITaxon:33083 biolink:NamedThing Dictyostelia NMDCO_relaxed.owl NCBITaxon:207598 biolink:NamedThing Homininae NMDCO_relaxed.owl NCBITaxon:9604 biolink:NamedThing Hominidae NMDCO_relaxed.owl NCBITaxon:2116530 biolink:NamedThing Salicornia subgen. Amerocornia NMDCO_relaxed.owl NCBITaxon:46104 biolink:NamedThing Salicornia NMDCO_relaxed.owl NCBITaxon:227566 biolink:NamedThing Hieroglyphus NMDCO_relaxed.owl NCBITaxon:227572 biolink:NamedThing Oxyinae NMDCO_relaxed.owl NCBITaxon:27549 biolink:NamedThing Oedipodinae NMDCO_relaxed.owl NCBITaxon:436880 biolink:NamedThing Chortoicetes NMDCO_relaxed.owl NCBITaxon:7003 biolink:NamedThing Locusta NMDCO_relaxed.owl NCBITaxon:7002 biolink:NamedThing Acrididae NMDCO_relaxed.owl NCBITaxon:37267 biolink:NamedThing Cyrtacanthacridinae NMDCO_relaxed.owl NCBITaxon:2301116 biolink:NamedThing Rhabditina NMDCO_relaxed.owl NCBITaxon:6236 biolink:NamedThing Rhabditida NMDCO_relaxed.owl NCBITaxon:2301119 biolink:NamedThing Rhabditomorpha NMDCO_relaxed.owl NCBITaxon:240294 biolink:NamedThing Schizothrix NMDCO_relaxed.owl NCBITaxon:554915 biolink:NamedThing Amoebozoa NMDCO_relaxed.owl NCBITaxon:2611352 biolink:NamedThing Discoba NMDCO_relaxed.owl NCBITaxon:2698737 biolink:NamedThing Sar NMDCO_relaxed.owl NCBITaxon:33154 biolink:NamedThing Opisthokonta NMDCO_relaxed.owl NCBITaxon:38254 biolink:NamedThing Glaucocystophyceae NMDCO_relaxed.owl NCBITaxon:262014 biolink:NamedThing Xenopus NMDCO_relaxed.owl NCBITaxon:8353 biolink:NamedThing Xenopus NMDCO_relaxed.owl NCBITaxon:2684882 biolink:NamedThing Zygnematophycidae NMDCO_relaxed.owl NCBITaxon:2696291 biolink:NamedThing Ochrophyta NMDCO_relaxed.owl NCBITaxon:33634 biolink:NamedThing Stramenopiles NMDCO_relaxed.owl NCBITaxon:2743709 biolink:NamedThing Danionidae NMDCO_relaxed.owl NCBITaxon:30727 biolink:NamedThing Cyprinoidei NMDCO_relaxed.owl NCBITaxon:2743711 biolink:NamedThing Danioninae NMDCO_relaxed.owl NCBITaxon:2785011 biolink:NamedThing Autobranchia NMDCO_relaxed.owl NCBITaxon:6544 biolink:NamedThing Bivalvia NMDCO_relaxed.owl NCBITaxon:3313 biolink:NamedThing Pinidae NMDCO_relaxed.owl NCBITaxon:2836 biolink:NamedThing Bacillariophyta NMDCO_relaxed.owl NCBITaxon:2864 biolink:NamedThing Dinophyceae NMDCO_relaxed.owl NCBITaxon:33630 biolink:NamedThing Alveolata NMDCO_relaxed.owl NCBITaxon:2910 biolink:NamedThing Peridiniales NMDCO_relaxed.owl NCBITaxon:30319 biolink:NamedThing Pipoidea NMDCO_relaxed.owl NCBITaxon:8342 biolink:NamedThing Anura NMDCO_relaxed.owl NCBITaxon:7952 biolink:NamedThing Cypriniformes NMDCO_relaxed.owl NCBITaxon:314146 biolink:NamedThing Euarchontoglires NMDCO_relaxed.owl NCBITaxon:314147 biolink:NamedThing Glires NMDCO_relaxed.owl NCBITaxon:9443 biolink:NamedThing Primates NMDCO_relaxed.owl NCBITaxon:314293 biolink:NamedThing Simiiformes NMDCO_relaxed.owl NCBITaxon:376913 biolink:NamedThing Haplorrhini NMDCO_relaxed.owl NCBITaxon:314295 biolink:NamedThing Hominoidea NMDCO_relaxed.owl NCBITaxon:9526 biolink:NamedThing Catarrhini NMDCO_relaxed.owl NCBITaxon:3176 biolink:NamedThing Zygnematales NMDCO_relaxed.owl NCBITaxon:32341 biolink:NamedThing Sophophora NMDCO_relaxed.owl NCBITaxon:7215 biolink:NamedThing Drosophila NMDCO_relaxed.owl NCBITaxon:32346 biolink:NamedThing melanogaster group NMDCO_relaxed.owl NCBITaxon:32351 biolink:NamedThing melanogaster subgroup NMDCO_relaxed.owl NCBITaxon:32440 biolink:NamedThing Chondrostei NMDCO_relaxed.owl NCBITaxon:41665 biolink:NamedThing Neopterygii NMDCO_relaxed.owl NCBITaxon:32523 biolink:NamedThing Tetrapoda NMDCO_relaxed.owl NCBITaxon:7878 biolink:NamedThing Dipnomorpha NMDCO_relaxed.owl NCBITaxon:32524 biolink:NamedThing Amniota NMDCO_relaxed.owl NCBITaxon:8292 biolink:NamedThing Amphibia NMDCO_relaxed.owl NCBITaxon:32525 biolink:NamedThing Theria NMDCO_relaxed.owl NCBITaxon:40674 biolink:NamedThing Mammalia NMDCO_relaxed.owl NCBITaxon:9254 biolink:NamedThing Prototheria NMDCO_relaxed.owl NCBITaxon:8457 biolink:NamedThing Sauropsida NMDCO_relaxed.owl NCBITaxon:3312 biolink:NamedThing Coniferophyta NMDCO_relaxed.owl NCBITaxon:58019 biolink:NamedThing Pinopsida NMDCO_relaxed.owl NCBITaxon:6072 biolink:NamedThing Eumetazoa NMDCO_relaxed.owl NCBITaxon:6073 biolink:NamedThing Cnidaria NMDCO_relaxed.owl NCBITaxon:33340 biolink:NamedThing Neoptera NMDCO_relaxed.owl NCBITaxon:7496 biolink:NamedThing Pterygota NMDCO_relaxed.owl NCBITaxon:33341 biolink:NamedThing Polyneoptera NMDCO_relaxed.owl NCBITaxon:33392 biolink:NamedThing Endopterygota NMDCO_relaxed.owl NCBITaxon:33682 biolink:NamedThing Euglenozoa NMDCO_relaxed.owl NCBITaxon:3378 biolink:NamedThing Gnetales NMDCO_relaxed.owl NCBITaxon:34346 biolink:NamedThing Schizosaccharomycetales NMDCO_relaxed.owl NCBITaxon:71274 biolink:NamedThing asterids NMDCO_relaxed.owl NCBITaxon:71275 biolink:NamedThing rosids NMDCO_relaxed.owl NCBITaxon:365482 biolink:NamedThing Salicornia pacifica NMDCO_relaxed.owl NCBITaxon:3699 biolink:NamedThing Brassicales NMDCO_relaxed.owl NCBITaxon:91836 biolink:NamedThing malvids NMDCO_relaxed.owl NCBITaxon:41944 biolink:NamedThing Myrtales NMDCO_relaxed.owl NCBITaxon:41197 biolink:NamedThing Heteroneura NMDCO_relaxed.owl NCBITaxon:37570 biolink:NamedThing Noctuoidea NMDCO_relaxed.owl NCBITaxon:40255 biolink:NamedThing Modiolus NMDCO_relaxed.owl NCBITaxon:403651 biolink:NamedThing Pfiesteriaceae NMDCO_relaxed.owl NCBITaxon:40551 biolink:NamedThing Arecales NMDCO_relaxed.owl NCBITaxon:4734 biolink:NamedThing commelinids NMDCO_relaxed.owl NCBITaxon:41191 biolink:NamedThing Glossata NMDCO_relaxed.owl NCBITaxon:7088 biolink:NamedThing Lepidoptera NMDCO_relaxed.owl NCBITaxon:41196 biolink:NamedThing Neolepidoptera NMDCO_relaxed.owl NCBITaxon:41324 biolink:NamedThing Siboglinidae NMDCO_relaxed.owl NCBITaxon:6362 biolink:NamedThing Sabellida NMDCO_relaxed.owl NCBITaxon:41377 biolink:NamedThing Avicennia NMDCO_relaxed.owl NCBITaxon:624272 biolink:NamedThing Avicennioideae NMDCO_relaxed.owl NCBITaxon:41378 biolink:NamedThing Avicennia germinans NMDCO_relaxed.owl NCBITaxon:4143 biolink:NamedThing Lamiales NMDCO_relaxed.owl NCBITaxon:91888 biolink:NamedThing lamiids NMDCO_relaxed.owl NCBITaxon:41666 biolink:NamedThing Batrachia NMDCO_relaxed.owl NCBITaxon:4185 biolink:NamedThing Acanthaceae NMDCO_relaxed.owl NCBITaxon:436486 biolink:NamedThing Dinosauria NMDCO_relaxed.owl NCBITaxon:8492 biolink:NamedThing Archosauria NMDCO_relaxed.owl NCBITaxon:436489 biolink:NamedThing Saurischia NMDCO_relaxed.owl NCBITaxon:436491 biolink:NamedThing Theropoda NMDCO_relaxed.owl NCBITaxon:436492 biolink:NamedThing Coelurosauria NMDCO_relaxed.owl NCBITaxon:43733 biolink:NamedThing Muscomorpha NMDCO_relaxed.owl NCBITaxon:7203 biolink:NamedThing Brachycera NMDCO_relaxed.owl NCBITaxon:43738 biolink:NamedThing Schizophora NMDCO_relaxed.owl NCBITaxon:480117 biolink:NamedThing Cyclorrhapha NMDCO_relaxed.owl NCBITaxon:43741 biolink:NamedThing Acalyptratae NMDCO_relaxed.owl NCBITaxon:43746 biolink:NamedThing Ephydroidea NMDCO_relaxed.owl NCBITaxon:43845 biolink:NamedThing Drosophilinae NMDCO_relaxed.owl NCBITaxon:7214 biolink:NamedThing Drosophilidae NMDCO_relaxed.owl NCBITaxon:4434 biolink:NamedThing Bataceae NMDCO_relaxed.owl NCBITaxon:4435 biolink:NamedThing Batis NMDCO_relaxed.owl NCBITaxon:4436 biolink:NamedThing Batis maritima NMDCO_relaxed.owl NCBITaxon:71240 biolink:NamedThing eudicotyledons NMDCO_relaxed.owl NCBITaxon:451864 biolink:NamedThing Dikarya NMDCO_relaxed.owl NCBITaxon:4890 biolink:NamedThing Ascomycota NMDCO_relaxed.owl NCBITaxon:465832 biolink:NamedThing Calyptra NMDCO_relaxed.owl NCBITaxon:46877 biolink:NamedThing Drosophilini NMDCO_relaxed.owl NCBITaxon:480118 biolink:NamedThing Eremoneura NMDCO_relaxed.owl NCBITaxon:4891 biolink:NamedThing Saccharomycetes NMDCO_relaxed.owl NCBITaxon:4892 biolink:NamedThing Saccharomycetales NMDCO_relaxed.owl NCBITaxon:4893 biolink:NamedThing Saccharomycetaceae NMDCO_relaxed.owl NCBITaxon:4894 biolink:NamedThing Schizosaccharomycetaceae NMDCO_relaxed.owl NCBITaxon:4895 biolink:NamedThing Schizosaccharomyces NMDCO_relaxed.owl NCBITaxon:4896 biolink:NamedThing Schizosaccharomyces pombe NMDCO_relaxed.owl NCBITaxon:4930 biolink:NamedThing Saccharomyces NMDCO_relaxed.owl NCBITaxon:4932 biolink:NamedThing Saccharomyces cerevisiae NMDCO_relaxed.owl NCBITaxon:50557 biolink:NamedThing Insecta NMDCO_relaxed.owl NCBITaxon:6960 biolink:NamedThing Hexapoda NMDCO_relaxed.owl NCBITaxon:519494 biolink:NamedThing Chortoicetes terminifera NMDCO_relaxed.owl NCBITaxon:51952 biolink:NamedThing Elaeis NMDCO_relaxed.owl NCBITaxon:51953 biolink:NamedThing Elaeis guineensis NMDCO_relaxed.owl NCBITaxon:55879 biolink:NamedThing Rhabditoidea NMDCO_relaxed.owl NCBITaxon:55885 biolink:NamedThing Peloderinae NMDCO_relaxed.owl NCBITaxon:6243 biolink:NamedThing Rhabditidae NMDCO_relaxed.owl NCBITaxon:5782 biolink:NamedThing Dictyostelium NMDCO_relaxed.owl NCBITaxon:58023 biolink:NamedThing Tracheophyta NMDCO_relaxed.owl NCBITaxon:78536 biolink:NamedThing Euphyllophyta NMDCO_relaxed.owl NCBITaxon:6040 biolink:NamedThing Porifera NMDCO_relaxed.owl NCBITaxon:6101 biolink:NamedThing Anthozoa NMDCO_relaxed.owl NCBITaxon:6157 biolink:NamedThing Platyhelminthes NMDCO_relaxed.owl NCBITaxon:6340 biolink:NamedThing Annelida NMDCO_relaxed.owl NCBITaxon:6447 biolink:NamedThing Mollusca NMDCO_relaxed.owl NCBITaxon:88770 biolink:NamedThing Panarthropoda NMDCO_relaxed.owl NCBITaxon:6237 biolink:NamedThing Caenorhabditis NMDCO_relaxed.owl NCBITaxon:6239 biolink:NamedThing Caenorhabditis elegans NMDCO_relaxed.owl NCBITaxon:6545 biolink:NamedThing Pteriomorphia NMDCO_relaxed.owl NCBITaxon:6548 biolink:NamedThing Mytilus NMDCO_relaxed.owl NCBITaxon:6993 biolink:NamedThing Orthoptera NMDCO_relaxed.owl NCBITaxon:92621 biolink:NamedThing Acridoidea NMDCO_relaxed.owl NCBITaxon:7004 biolink:NamedThing Locusta migratoria NMDCO_relaxed.owl NCBITaxon:7008 biolink:NamedThing Schistocerca NMDCO_relaxed.owl NCBITaxon:7010 biolink:NamedThing Schistocerca gregaria NMDCO_relaxed.owl NCBITaxon:85604 biolink:NamedThing Amphiesmenoptera NMDCO_relaxed.owl NCBITaxon:70910 biolink:NamedThing Acridomorpha NMDCO_relaxed.owl NCBITaxon:71000 biolink:NamedThing Pfiesteria NMDCO_relaxed.owl NCBITaxon:7147 biolink:NamedThing Diptera NMDCO_relaxed.owl NCBITaxon:7227 biolink:NamedThing Drosophila melanogaster NMDCO_relaxed.owl NCBITaxon:85512 biolink:NamedThing Dicondylia NMDCO_relaxed.owl NCBITaxon:7711 biolink:NamedThing Chordata NMDCO_relaxed.owl NCBITaxon:7624 biolink:NamedThing Echinozoa NMDCO_relaxed.owl NCBITaxon:7712 biolink:NamedThing Tunicata NMDCO_relaxed.owl NCBITaxon:89593 biolink:NamedThing Craniata NMDCO_relaxed.owl NCBITaxon:7761 biolink:NamedThing Myxiniformes NMDCO_relaxed.owl NCBITaxon:7762 biolink:NamedThing Myxinidae NMDCO_relaxed.owl NCBITaxon:7863 biolink:NamedThing Holocephali NMDCO_relaxed.owl NCBITaxon:7864 biolink:NamedThing Chimaeriformes NMDCO_relaxed.owl NCBITaxon:7901 biolink:NamedThing Acipenser NMDCO_relaxed.owl NCBITaxon:7954 biolink:NamedThing Danio NMDCO_relaxed.owl NCBITaxon:7955 biolink:NamedThing Danio rerio NMDCO_relaxed.owl NCBITaxon:8352 biolink:NamedThing Pipidae NMDCO_relaxed.owl NCBITaxon:8360 biolink:NamedThing Xenopodinae NMDCO_relaxed.owl NCBITaxon:8355 biolink:NamedThing Xenopus laevis NMDCO_relaxed.owl NCBITaxon:8782 biolink:NamedThing Aves NMDCO_relaxed.owl NCBITaxon:8783 biolink:NamedThing Palaeognathae NMDCO_relaxed.owl NCBITaxon:8825 biolink:NamedThing Neognathae NMDCO_relaxed.owl NCBITaxon:8798 biolink:NamedThing Struthioniformes NMDCO_relaxed.owl NCBITaxon:8799 biolink:NamedThing Struthionidae NMDCO_relaxed.owl NCBITaxon:8800 biolink:NamedThing Struthio NMDCO_relaxed.owl NCBITaxon:8801 biolink:NamedThing Struthio camelus NMDCO_relaxed.owl NCBITaxon:8929 biolink:NamedThing Columbiformes NMDCO_relaxed.owl NCBITaxon:8930 biolink:NamedThing Columbidae NMDCO_relaxed.owl NCBITaxon:9255 biolink:NamedThing Monotremata NMDCO_relaxed.owl NCBITaxon:9259 biolink:NamedThing Tachyglossidae NMDCO_relaxed.owl NCBITaxon:92939 biolink:NamedThing Gloeotrichia NMDCO_relaxed.owl NCBITaxon:9605 biolink:NamedThing Homo NMDCO_relaxed.owl OBI:0000967 biolink:NamedThing container A device that can be used to restrict the location of material entities over time NMDCO_relaxed.owl PATO:0001023 biolink:NamedThing momentum A physical quality inhering in a bearer by virtue of the bearer's velocity multiplied by its mass. NMDCO_relaxed.owl PATO:0001028 biolink:NamedThing acceleration A physical quality inhering in a bearer by virtue of the rate of change of the bearer's velocity in either speed or direction. NMDCO_relaxed.owl PATO:0001574 biolink:NamedThing flow rate A physical quality inhering in a bearer by virtue of the bearer's motion characteristic. NMDCO_relaxed.owl PATO:0000011 biolink:NamedThing age A time quality inhering in a bearer by virtue of how long the bearer has existed. NMDCO_relaxed.owl PATO:0000052 biolink:NamedThing shape A morphological quality inhering in a bearer by virtue of the bearer's ratios of distances between its features (points, edges, surfaces and also holes etc). NMDCO_relaxed.owl PATO:0000060 biolink:NamedThing spatial pattern A spatial quality inhering in a bearer by virtue of the bearer's exhibiting repetition of placement of its parts. NMDCO_relaxed.owl PATO:0000117 biolink:NamedThing size A morphology quality inhering in a bearer by virtue of the bearer's physical magnitude. NMDCO_relaxed.owl PATO:0000136 biolink:NamedThing closure A morphological quality pertaining to the degree to which an object contains an opening, aperture, orifice or vent. NMDCO_relaxed.owl PATO:0001617 biolink:NamedThing deformed A morphological quality inhering in a bearer by virtue of the bearer's being distorted in form. NMDCO_relaxed.owl PATO:0001300 biolink:NamedThing optical quality An EM radiation quality in which the EM radiation is within the fiat range of the spectrum visible deemed to be light. NMDCO_relaxed.owl PATO:0000957 biolink:NamedThing opacity An optical quality which obtains by virtue of the ability of the bearer to absorb visible light. NMDCO_relaxed.owl PATO:0001296 biolink:NamedThing luminous flux A scalar optical quality which obtains by the magnitude of the light emitted by the bearer. NMDCO_relaxed.owl PATO:0000019 biolink:NamedThing color pattern A chromatic property that is the relative position of different hues or degrees of saturation. NMDCO_relaxed.owl PATO:0000330 biolink:NamedThing irregular spatial pattern A spatial pattern inhering in a bearer by virtue of the bearer's magnitude of or the relationships between its repeated parts lack consistency. NMDCO_relaxed.owl PATO:0000440 biolink:NamedThing regular spatial pattern A pattern quality inhering in a bearer by virtue of the bearer's having a repeatable or predictable placement. NMDCO_relaxed.owl PATO:0000634 biolink:NamedThing unilateral A spatial pattern inhering in a bearer by virtue of the bearer's involvement of only one part or side. NMDCO_relaxed.owl PATO:0001566 biolink:NamedThing distributed A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up. NMDCO_relaxed.owl PATO:0002067 biolink:NamedThing stratification A spatial pattern inhering in a bearer by virtue of the bearer's layered configuration. NMDCO_relaxed.owl PATO:0000044 biolink:NamedThing frequency A physical quality which inheres in a bearer by virtue of the number of the bearer's repetitive actions in a particular time. NMDCO_relaxed.owl PATO:0055003 biolink:NamedThing increased rate of occurrence A rate of occurrence that is relatively high. NMDCO_relaxed.owl PATO:0055004 biolink:NamedThing decreased rate of occurrence A rate of occurrence that is relatively low. NMDCO_relaxed.owl PATO:0000048 biolink:NamedThing hardness A physical quality inhering in a bearer by virtue of the bearer's resistance to pressure, being broken, or pierced NMDCO_relaxed.owl PATO:0001543 biolink:NamedThing flexibility A physical quality inhering in a bearer by virtue of the bearer's disposition to being turned, bowed, or twisted without breaking. NMDCO_relaxed.owl PATO:0001736 biolink:NamedThing solid configuration A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of solids. NMDCO_relaxed.owl PATO:0000069 biolink:NamedThing deviation (from_normal) A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average. NMDCO_relaxed.owl PATO:0000057 biolink:NamedThing occurrence A quality of a single process inhering in a bearer by virtue of the bearer's occurrence. NMDCO_relaxed.owl PATO:0000085 biolink:NamedThing sensitivity toward A quality inhering in a bearer by virtue of the bearer's disposition to detect or perceive external stimulation. NMDCO_relaxed.owl PATO:0000169 biolink:NamedThing viability An organismal quality inhering in a bearer or a population by virtue of the bearer's disposition to survive and develop normally or the number of surviving individuals in a given population. NMDCO_relaxed.owl PATO:0000261 biolink:NamedThing maturity A quality of a single physical entity which is held by a bearer when the latter exhibits a state of growth, differentiation, or development. NMDCO_relaxed.owl PATO:0001729 biolink:NamedThing shedability An organismal quality inhering in a bearer by virtue of the bearer's disposition to lose an entity by natural process. NMDCO_relaxed.owl PATO:0001992 biolink:NamedThing cellularity An organismal quality inhering in a bearer by virtue of the bearer's consisting cells. NMDCO_relaxed.owl PATO:0000122 biolink:NamedThing length A 1-D extent quality which is equal to the distance between two points. NMDCO_relaxed.owl PATO:0001708 biolink:NamedThing 1-D extent A size quality inhering in an bearer by virtue of the bearer's extension in one dimension. NMDCO_relaxed.owl PATO:0000921 biolink:NamedThing width A 1-D extent quality which is equal to the distance from one side of an object to another side which is opposite. NMDCO_relaxed.owl PATO:0001711 biolink:NamedThing perimeter An 1-D extent quality inhering in two-dimensional bearer by virtue of being equal to the distance around it. NMDCO_relaxed.owl PATO:0001162 biolink:NamedThing increased concentration A concentration which is higher relative to the normal or average. NMDCO_relaxed.owl PATO:0001559 biolink:NamedThing having extra function A functionality quality which is held by the bearer when the latter is able to perform additional or different function(s). NMDCO_relaxed.owl PATO:0001563 biolink:NamedThing increased mass A mass which is higher than normal or average. NMDCO_relaxed.owl PATO:0001676 biolink:NamedThing increased efficiency An efficiency which is relatively high. NMDCO_relaxed.owl PATO:0001693 biolink:NamedThing increased viscosity A viscosity which relatively high. NMDCO_relaxed.owl PATO:0001825 biolink:NamedThing increased wetness A wetness quality that is relatively high. NMDCO_relaxed.owl PATO:0001839 biolink:NamedThing increased fluid flow A fluid flow that is relatively high. NMDCO_relaxed.owl PATO:0001163 biolink:NamedThing decreased concentration A concentration which is lower relative to the normal or average. NMDCO_relaxed.owl PATO:0001562 biolink:NamedThing decreased mass A mass which is lower than normal or average. NMDCO_relaxed.owl PATO:0001624 biolink:NamedThing decreased functionality A functionality quality held by the bearer when the latter exhibits decreased ability to perform a regular function(s). NMDCO_relaxed.owl PATO:0001675 biolink:NamedThing decreased efficiency An efficiency which is relatively low. NMDCO_relaxed.owl PATO:0001790 biolink:NamedThing decreased mass density A density which is lower relative to the normal or average. NMDCO_relaxed.owl PATO:0001826 biolink:NamedThing decreased wetness A wetness quality that is relatively low. NMDCO_relaxed.owl PATO:0001838 biolink:NamedThing decreased fluid flow A flow that is relatively low. NMDCO_relaxed.owl PATO:0000337 biolink:NamedThing colorless A color quality inhering in a bearer by virtue of the bearer's lacking color. NMDCO_relaxed.owl PATO:0000380 biolink:NamedThing increased frequency A frequency which is relatively high. NMDCO_relaxed.owl PATO:0000381 biolink:NamedThing decreased frequency A frequency which is relatively low. NMDCO_relaxed.owl PATO:0002009 biolink:NamedThing branchiness A shape quality inhering in a bearer by virtue of the degree to which there are subdivisions or offshoots in a bearer entity. NMDCO_relaxed.owl PATO:0000404 biolink:NamedThing coiled A shape quality inhering in a bearer by virtue of the bearer's being curled or wound (especially in concentric rings or spirals). NMDCO_relaxed.owl PATO:0001794 biolink:NamedThing coiling A shape quality inhering in a bearer by virtue of the bearer's being wound in a continuous series of loops. NMDCO_relaxed.owl PATO:0000405 biolink:NamedThing curled A shape quality inhering in a bearer by virtue of the bearer's having parallel chains in undulate fashion on the border. NMDCO_relaxed.owl PATO:0000967 biolink:NamedThing undulate A shape quality inhering in a bearer by virtue of the bearer's having a sinuate margin and rippled surface. NMDCO_relaxed.owl PATO:0001591 biolink:NamedThing curvature A surface shape quality inhering in a bearer by virtue of the bearer's exhibiting a degree of bending. NMDCO_relaxed.owl PATO:0001799 biolink:NamedThing ruffled A shape quality inhering in a bearer by virtue of the bearer's exhibiting disturbance of its smoothness or regularity. NMDCO_relaxed.owl PATO:0001925 biolink:NamedThing surface feature shape A surface shape quality inhering in a bearer by virtue of the bearer's shape of features present on its surface or outer shell. NMDCO_relaxed.owl PATO:0001960 biolink:NamedThing interdigitated A shape quality inhering in a bearer by virtue of the bearer's parts or projections being interlocked; for example, the fingers of two hands that are clasped. NMDCO_relaxed.owl PATO:0002005 biolink:NamedThing concavity Surface shape that refers to the inward or outward curvature of the surface. NMDCO_relaxed.owl PATO:0002006 biolink:NamedThing 2-D shape A shape that inheres in a 2 dimensional entity, such as a cross section or projection of a 3 dimensional entity. NMDCO_relaxed.owl PATO:0002165 biolink:NamedThing drooping To bent or hang downwards. NMDCO_relaxed.owl PATO:0002180 biolink:NamedThing straight A shape quality inhering in a bearer by virtue of the bearer's being free of curves, bends, or angles. NMDCO_relaxed.owl PATO:0002215 biolink:NamedThing falciform A shape quality inhering in a bearer by virtue of the bearer's having the shape of a scythe or sickle. NMDCO_relaxed.owl PATO:0002266 biolink:NamedThing 3-D shape A shape that inheres in a 3 dimensional entity. NMDCO_relaxed.owl PATO:0002267 biolink:NamedThing edge shape NMDCO_relaxed.owl PATO:0002311 biolink:NamedThing fimbriated Having a fringe or border of hairlike or fingerlike projections. NMDCO_relaxed.owl PATO:0002335 biolink:NamedThing tholiform A shape quality inhering in a bearer by virtue of the bearer's being dome-shaped. NMDCO_relaxed.owl PATO:0002359 biolink:NamedThing broad A quality inhering in a bearer by virtue of the bearer's width being notably higher than its length. NMDCO_relaxed.owl PATO:0002521 biolink:NamedThing funnel-shaped A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a funnel. NMDCO_relaxed.owl PATO:0005005 biolink:NamedThing radiating Shape quality inhering in a bearer expanding outward, or having parts expanding outward, from a center point. NMDCO_relaxed.owl PATO:0000406 biolink:NamedThing curved A curvature quality inhering in a bearer by virtue of the bearer's having or being marked by a curve or smoothly rounded bend. NMDCO_relaxed.owl PATO:0000947 biolink:NamedThing elliptic A spheroid quality inhering in a bearer by virtue of the bearer's being oval with two axes of symmetry, as produced by a conical section. NMDCO_relaxed.owl PATO:0000428 biolink:NamedThing sporadic A quality of a single process inhering in a bearer by virtue of the bearer's once or in or a few unpredictable instances. NMDCO_relaxed.owl PATO:0000573 biolink:NamedThing increased length A length quality which is relatively large. NMDCO_relaxed.owl PATO:0000574 biolink:NamedThing decreased length A length quality which is relatively small. NMDCO_relaxed.owl PATO:0000600 biolink:NamedThing increased width A width which is relatively large. NMDCO_relaxed.owl PATO:0002057 biolink:NamedThing increased area An area which is relatively high. NMDCO_relaxed.owl PATO:0000599 biolink:NamedThing decreased width A width which is relatively small. NMDCO_relaxed.owl PATO:0002058 biolink:NamedThing decreased area An area which is relatively low. NMDCO_relaxed.owl PATO:0001709 biolink:NamedThing 2-D extent A size quality inhering in an bearer by virtue of the bearer's extension in two dimensions. NMDCO_relaxed.owl PATO:0001710 biolink:NamedThing 3-D extent A size quality inhering in an bearer by virtue of the bearer's extension in three dimensions. NMDCO_relaxed.owl PATO:0045050 biolink:NamedThing normal size A size quality which is relatively normal or average NMDCO_relaxed.owl PATO:0045061 biolink:NamedThing normal width A width which is relatively normal or average NMDCO_relaxed.owl PATO:0000610 biolink:NamedThing open A morphological quality inhering in a bearer by virtue of the bearer's affording unobstructed passage or view. NMDCO_relaxed.owl PATO:0000946 biolink:NamedThing oblong A shape quality inhering in a bearer by virtue of the bearer's having a somewhat elongated form with approximately parallel sides. NMDCO_relaxed.owl PATO:0002318 biolink:NamedThing superelliptic A shape constituting a transition between a rectangle and a circle; a closed curve, of which the circle and ellipse are special cases, whose parametric equation is x = a.cos2/rt, y = b.cos2/rt NMDCO_relaxed.owl PATO:0001354 biolink:NamedThing translucent A optical quality inhering in a bearer by virtue of the bearer's exhibiting low opacity. NMDCO_relaxed.owl PATO:0000982 biolink:NamedThing permeable A permeability quality inhering in a bearer by virtue of the bearer's being capable to be permeated or pervaded by a gas or liquid (as by osmosis or diffusion). NMDCO_relaxed.owl PATO:0000992 biolink:NamedThing viscosity A physical quality of a fluid inhering in a bearer by virtue of the bearer's disposition to internal resistance to flow. NMDCO_relaxed.owl PATO:0001735 biolink:NamedThing liquid configuration A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of liquids. NMDCO_relaxed.owl PATO:0001172 biolink:NamedThing inelastic An elasticity quality inhering in a bearer by virtue of the bearer's inability to recover its size and shape after deformation in any way. NMDCO_relaxed.owl PATO:0001185 biolink:NamedThing larval A maturity quality inhering in a bearer by virtue of the bearer's indirect development, undergoing metamorphosis. NMDCO_relaxed.owl PATO:0001201 biolink:NamedThing Y-shaped A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter Y. NMDCO_relaxed.owl PATO:0001890 biolink:NamedThing tripartite A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being divided into three branches. NMDCO_relaxed.owl PATO:0001208 biolink:NamedThing odorless An odor quality inhering in a bearer by virtue of the bearer's lacking odour. NMDCO_relaxed.owl PATO:0001291 biolink:NamedThing electromagnetic (EM) radiation quality A physical quality that inheres in an bearer by virtue of how that bearer interacts with electromagnetic radiation. NMDCO_relaxed.owl PATO:0001740 biolink:NamedThing activity (of a radionuclide) A radiation quality inhering in a radioactive substance by virtue of its transformation (disintegration) rate. NMDCO_relaxed.owl PATO:0001292 biolink:NamedThing full-spectrum EM radiation quality An EM radiation quality that is independent of the EM wavelength range. NMDCO_relaxed.owl PATO:0070060 biolink:NamedThing quality of interaction of a substance with electromagnetic radiation A quality of a substance on which or through which electromagnetic radiation impinges or traverses with respect to radiation. This substance quality changes the quality of the incident radiation with respect to any of: intensity, direction, scatter and wavelength. NMDCO_relaxed.owl PATO:0001294 biolink:NamedThing radiation reflective quality A scalar EM radiation quality which obtains by the capacity of the bearer to scatter or reflect radiation. NMDCO_relaxed.owl PATO:0001323 biolink:NamedThing area A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent. NMDCO_relaxed.owl PATO:0001367 biolink:NamedThing lobate A surface feature shape quality inhering in a bearer by virtue of the bearer's having deeply undulating edges forming lobes. NMDCO_relaxed.owl PATO:0002433 biolink:NamedThing sculpted surface A surface feature shape marked by large amounts of relief, often with multiple ridges and grooves in close association. Topographically complex. NMDCO_relaxed.owl PATO:0002440 biolink:NamedThing ornamentation A surface feature shape quality inhering in a bearer by virtue of the degree of the bearer's highly topographical with ridges, pits, rugosity or other surface structures. NMDCO_relaxed.owl PATO:0001374 biolink:NamedThing ploidy A cellular quality inhering in a bearer by virtue of the bearer's number of homologous sets of chromosomes in the nucleus or primary chromosome-containing compartment of the cell, each set essentially coding for all the biological traits of the organism. NMDCO_relaxed.owl PATO:0001396 biolink:NamedThing cellular quality A monadic quality of continuant that exists at the cellular level of organisation. NMDCO_relaxed.owl PATO:0001397 biolink:NamedThing cellular potency A cellular quality that arises by virtue of whether the bearer's disposition to differentiate into one or more mature cell types. NMDCO_relaxed.owl PATO:0001404 biolink:NamedThing nucleate quality A cellular quality inhering in a bearer by virtue of bearer's number of nuclei. NMDCO_relaxed.owl PATO:0001408 biolink:NamedThing ciliatedness A cellular quality inhering in a bearer by virtue of the bearer's having thin, tail-like projections extending outwards from the cell body. NMDCO_relaxed.owl PATO:0070045 biolink:NamedThing anatomical histological quality A quality inhering in an anotomical structure by virtue of its capacity to be stained by specific histological dyes. NMDCO_relaxed.owl PATO:0001432 biolink:NamedThing decayed A quality inhering in a bearer by virtue of the bearer's decomposition into component parts. NMDCO_relaxed.owl PATO:0001453 biolink:NamedThing detached from An attachment quality inhering in a bearer by virtue of the bearer's lacking connection or association with another entity. NMDCO_relaxed.owl PATO:0001454 biolink:NamedThing sensitivity to oxygen A sensitivity quality inhering in a bearer by virtue of the bearer's dependence on oxygen. NMDCO_relaxed.owl PATO:0001499 biolink:NamedThing spherical A spheroid quality inhering in a bearer by virtue of the bearer's resembling a ball (a sphere whose equatorial diameter is equal to the polar diameter). NMDCO_relaxed.owl PATO:0001865 biolink:NamedThing spheroid A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating an ellipse about one of its principal axes. Includes spheres and oblate/prolate spheroids. NMDCO_relaxed.owl PATO:0001510 biolink:NamedThing functional A functionality quality held by the bearer when the latter is able to perform a regular function(s). NMDCO_relaxed.owl PATO:0001544 biolink:NamedThing flexible A physical quality inhering in a bearer by virtue of the bearer's ability of being turned, bowed, or twisted without breaking. NMDCO_relaxed.owl PATO:0001583 biolink:NamedThing decreased variability A variability which is relatively low. NMDCO_relaxed.owl PATO:0001584 biolink:NamedThing increased variability A variability which is relatively high. NMDCO_relaxed.owl PATO:0002374 biolink:NamedThing fluctuating Recurrent and often more or less cyclic alteration. NMDCO_relaxed.owl PATO:0002301 biolink:NamedThing decreased quality A quality that has a value that is decreased compared to normal or average. NMDCO_relaxed.owl PATO:0001957 biolink:NamedThing decreased variability of size A variability of size which is relatively low. NMDCO_relaxed.owl PATO:0001997 biolink:NamedThing decreased amount An amount which is relatively low. NMDCO_relaxed.owl PATO:0002300 biolink:NamedThing increased quality A quality that has a value that is increased compared to normal or average. NMDCO_relaxed.owl PATO:0001958 biolink:NamedThing increased variability of size A variability of size which is relatively high. NMDCO_relaxed.owl PATO:0001594 biolink:NamedThing arched A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch. NMDCO_relaxed.owl PATO:0001857 biolink:NamedThing concave A shape quality in a bearer by virtue of the bearer's curving inward. NMDCO_relaxed.owl PATO:0001748 biolink:NamedThing invaginated A shape quality in which a portion of the outermost boundary of an entity folds in space such that a portion that was originally convex is now concave. NMDCO_relaxed.owl PATO:0001608 biolink:NamedThing patchy A spatial pattern inhering in a bearer by virtue of the bearer's being marked by, consisting of, or diversified with patches. NMDCO_relaxed.owl PATO:0001629 biolink:NamedThing aggregated A spatial pattern inhering in a bearer by virtue of the bearer's being gathered or tending to gather into a mass or whole. NMDCO_relaxed.owl PATO:0002121 biolink:NamedThing trabecular A spatial pattern inhering in a bearer by virtue of the bearer's structure resembling an irregular meshwork with cross-linking struts. NMDCO_relaxed.owl PATO:0001625 biolink:NamedThing increased functionality A functional quality held by the bearer when the latter exhibits increased ability to perform a regular function(s). NMDCO_relaxed.owl PATO:0001648 biolink:NamedThing circumference An 1-D extent quality which is equal to the length of the closed curve of a circle. NMDCO_relaxed.owl PATO:0001712 biolink:NamedThing increased perimeter A perimeter which is relatively high. NMDCO_relaxed.owl PATO:0001713 biolink:NamedThing decreased perimeter A perimeter which is relatively low. NMDCO_relaxed.owl PATO:0001653 biolink:NamedThing aligned with An alignment quality inhering in a bearer by virtue of the bearer's being in a proper spatial positioning with respect to an additional entity. NMDCO_relaxed.owl PATO:0001654 biolink:NamedThing misaligned with An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning with respect to an additional entity. NMDCO_relaxed.owl PATO:0001671 biolink:NamedThing increased distribution A distribution which is relatively high. NMDCO_relaxed.owl PATO:0001672 biolink:NamedThing decreased distribution A distribution which is relatively low. NMDCO_relaxed.owl PATO:0001678 biolink:NamedThing efficient An efficiency quality inhering in a bearer by virtue of the bearer's having efficiency. NMDCO_relaxed.owl PATO:0001685 biolink:NamedThing magnetic A magnetic quality inhering in a bearer by virtue of the bearer's ability to exert magnitism. NMDCO_relaxed.owl PATO:0001690 biolink:NamedThing contractile A contractility quality inhering in a bearer by virtue of the bearer's ability of contracting or being contracted. NMDCO_relaxed.owl PATO:0001730 biolink:NamedThing deciduous (generic) A quality inhering in a bearer by virtue of the bearer's disposition to shed body parts. NMDCO_relaxed.owl PATO:0001732 biolink:NamedThing non-deciduous (any body part) A quality inhering in a plant by virtue of the bearer's disposition to not shed any body part. NMDCO_relaxed.owl PATO:0001756 biolink:NamedThing heat conductivity A conductivity quality inhering in a bearer by virtue of the bearer's disposition to spontaneous transfer of thermal energy from a region of higher temperature to a region of lower temperature. NMDCO_relaxed.owl PATO:0002243 biolink:NamedThing fluid flow rate A physical quality inhering in a fluid (liquid or gas) by virtue of the amount of fluid which passes through a given surface per unit time. NMDCO_relaxed.owl PATO:0002007 biolink:NamedThing convex 3-D shape A complete three dimensional shape in which for every line connecting pair of points on the object is within the object. Or: a shape lacking cavities. Contrast: concave. NMDCO_relaxed.owl PATO:0001873 biolink:NamedThing cylindrical A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a consistently-sized round cross section. NMDCO_relaxed.owl PATO:0002008 biolink:NamedThing concave 3-D shape A complete three dimensional shape in which there is a line connecting pair of points on the object that lies outside the object. Or: a shape with cavities. Contrast: concave. NMDCO_relaxed.owl PATO:0002386 biolink:NamedThing anvil A concave 3-D shape that inheres in the bearer by virtue of the bearer's shape that is wider at one end and narrow in the middle. NMDCO_relaxed.owl PATO:0040009 biolink:NamedThing bowl shaped A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of a bowl. NMDCO_relaxed.owl PATO:0001887 biolink:NamedThing hydrophilic A quality inhering in a bearer by virtue of the bearer's disposition to having a strong affinity for water; tending to dissolve in, mix with, or be wetted by water. NMDCO_relaxed.owl PATO:0002045 biolink:NamedThing dendritic A branched quality inhering in a bearer by virtue of the bearer's having smaller branches arising from larger branches. Resembling a tree in branching structure. NMDCO_relaxed.owl PATO:0001899 biolink:NamedThing decreased circumference A circumference which is relatively low. NMDCO_relaxed.owl PATO:0001935 biolink:NamedThing obtuse A shape quality inhering in a bearer by virtue of the bearer's being roundish, a little inclining to be oblong. NMDCO_relaxed.owl PATO:0001987 biolink:NamedThing saccular A structural quality inhering in a bearer by virtue of the bearer's having a three dimensional cavity with a narrow or no opening, and often containing an anatomical substance. NMDCO_relaxed.owl PATO:0002078 biolink:NamedThing hollow A quality inhering in a bearer by virtue of the bearer's having an empty space or cavity within. NMDCO_relaxed.owl PATO:0001993 biolink:NamedThing multicellular A cellularity quality inhering in a bearer by virtue of the bearer's consisting of more than one cell. NMDCO_relaxed.owl PATO:0045051 biolink:NamedThing normal area An area which is relatively normal or average NMDCO_relaxed.owl PATO:0002068 biolink:NamedThing stratified A spatial pattern inhering in a bearer by virtue of the bearer's exhibiting a layered configuration. NMDCO_relaxed.owl PATO:0002080 biolink:NamedThing broken into two pieces A broken quality inhering in a bearer by virtue of the bearer's being separated into two contiguous wholes. NMDCO_relaxed.owl PATO:0002139 biolink:NamedThing edible A physical quality inhering in a bearer by virtue of the bearer being suitable for use as food. NMDCO_relaxed.owl PATO:0002140 biolink:NamedThing inedible A physical quality inhering in a bearer by virtue of the bearer not being suitable for use as food. NMDCO_relaxed.owl PATO:0002173 biolink:NamedThing misaligned towards An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning towards an additional entity. NMDCO_relaxed.owl PATO:0002174 biolink:NamedThing misaligned away from An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning away from an additional entity. NMDCO_relaxed.owl PATO:0002224 biolink:NamedThing V-shaped An angular shape quality inhering in a bearer by virtue of the bearer's having a single angle in its length giving the bearer the form of the letter V. NMDCO_relaxed.owl PATO:0002226 biolink:NamedThing subcylindrical A cylindrical shape quality inhering in a bearer by virtue of the bearer's being imperfectly cylindrical or approximately cylindrical. NMDCO_relaxed.owl PATO:0002260 biolink:NamedThing semi erect A quality inhering in a bearer by virtue of the bearer's being partially upright in position or posture. NMDCO_relaxed.owl PATO:0002270 biolink:NamedThing increased accumulation An increased number of physical objects that are accumulated within another physical object usually as a result of a failure to break down or remove objects in a timely manner. NMDCO_relaxed.owl PATO:0002271 biolink:NamedThing decreased accumulation An accumulation which is relative low. NMDCO_relaxed.owl PATO:0002309 biolink:NamedThing fiber shaped A convex 3-D shape quality inhering in a bearer by virtue of the bearer's exhibiting a by virtue of the bearer's exhibiting a consistently sized and approximately round cross-section along its length, which is many times larger than its diameter. NMDCO_relaxed.owl PATO:0002441 biolink:NamedThing ornamented A surface feature shape in which the bearer's surface is highly topographical with ridges, pits, rugosity or other surface structures. NMDCO_relaxed.owl PATO:0002468 biolink:NamedThing distensible A structure quality inhering in a bearer by virtue of the bearer's being capable of swelling or stretching. NMDCO_relaxed.owl PATO:0040008 biolink:NamedThing fringed A shape quality inhering in a bearer by virtue of the bearer's having an ornamental border consisting of short straight or twisted threads or strips hanging from cut or raveled edges or from a separate band. NMDCO_relaxed.owl PATO:0045091 biolink:NamedThing north North is one of the four compass points or cardinal directions. It is the opposite of south and is perpendicular to east and west. NMDCO_relaxed.owl PATO:0045092 biolink:NamedThing east East is one of the four cardinal directions or points of the compass. It is the opposite direction from west. NMDCO_relaxed.owl PATO:0045093 biolink:NamedThing south South is one of the four cardinal directions or compass points. South is the polar opposite of north and is perpendicular to east and west. NMDCO_relaxed.owl PATO:0045094 biolink:NamedThing west West is one of the four cardinal directions or points of the compass. It is the opposite direction from east. NMDCO_relaxed.owl PCO:0000051 biolink:NamedThing multi-species collection of microbes A multi-species collection of organisms that consists of two or more microbes from at least two species. NMDCO_relaxed.owl PO:0000001 biolink:NamedThing plant embryo proper An embryonic plant structure (PO:0025099) that is the body of a developing plant embryo (PO:0009009) attached to the maternal tissue in an plant ovule (PO:0020003) by a suspensor (PO:0020108). NMDCO_relaxed.owl PO:0025099 biolink:NamedThing embryo plant structure A plant structure (PO:0009011) that is part of an plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0004708 biolink:NamedThing scutellar node A stem node (PO:0020141) that is part of a plant embryo axis (PO:0019018) where the scutellum (PO:0020110) is attached. NMDCO_relaxed.owl PO:0006338 biolink:NamedThing embryo leaf A vascular leaf that is part of a plant embryo and is one of the first few leaves to develop from the embryonic shoot apical meristem. NMDCO_relaxed.owl PO:0019018 biolink:NamedThing plant embryo axis A plant axis (PO:0025004) that is the axial part of a plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0020032 biolink:NamedThing plumule The shoot apex (PO:0000037) of the plant embryo (PO:0009009), above the cotyledonary node (PO:0025321). NMDCO_relaxed.owl PO:0020108 biolink:NamedThing suspensor An embryonic plant structure at the base of a plant embryo that develops from an embryonic basal cell and connects an embryo proper to the wall of a megagametophyte. NMDCO_relaxed.owl PO:0020110 biolink:NamedThing scutellum An embryonic plant structure that is a more or less shield-shaped and absorptive portion of a plant embryo of Poaceae. NMDCO_relaxed.owl PO:0025028 biolink:NamedThing embryo plant cell A native plant cell (PO:0025606) that is part of a plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0025233 biolink:NamedThing portion of embryo plant tissue A portion of plant tissue (PO:0009007) that is part of a plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0025286 biolink:NamedThing plant embryo coleoptile A coleoptile (PO:0020033) that is part of a plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0025288 biolink:NamedThing embryo coleorhiza A coleorhiza (PO:0020034) that is part of a plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0025290 biolink:NamedThing embryo hypocotyl A hypocotyl (PO:0020100) that is part of a plant embryo axis (PO:0019018). NMDCO_relaxed.owl PO:0025292 biolink:NamedThing embryo epicotyl An epicotyl (PO:0020035) that is part of a plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0025294 biolink:NamedThing embryo mesocotyl A mesocotyl (PO:0020037) that is part of a plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0025296 biolink:NamedThing plant embryo radicle A radicle (PO:0020031) that is part of a plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0025300 biolink:NamedThing embryo hypocotyl-root junction A hypocotyl-root junction (PO:0004724) that is part of an plant embryo axis (PO:0019018). NMDCO_relaxed.owl PO:0000002 biolink:NamedThing anther wall A microsporangium wall (PO:0025307) that is part of an anther (PO:0009066). NMDCO_relaxed.owl PO:0025307 biolink:NamedThing microsporangium wall A sporangium wall (PO:0025306) that is part of a microsporangium (PO:0025202). NMDCO_relaxed.owl PO:0009011 biolink:NamedThing plant structure A plant anatomical entity (PO:0025131) that is, or was, part of a plant, or was derived from a part of a plant. NMDCO_relaxed.owl PO:0000004 biolink:NamedThing in vitro plant structure A plant structure (PO:0009011) that is grown or maintained in vitro. NMDCO_relaxed.owl PO:0000282 biolink:NamedThing trichome A unicellular or multicellular plant structure (PO:0009011) that forms a non-sclerified outgrowth from the epidermis (PO:0005679). NMDCO_relaxed.owl PO:0009002 biolink:NamedThing plant cell A cell which is a plant structure (PO:0009011). NMDCO_relaxed.owl PO:0009007 biolink:NamedThing portion of plant tissue A plant structure (PO:0009011) that consists predominantly of similarly specialized plant cells (PO:0009002) of one or more types. NMDCO_relaxed.owl PO:0009072 biolink:NamedThing plant ovary A plant structure (PO:0009011) that is the basal portion of a carpel (PO:0009030) or group of fused carpels (gynoecium; PO:0009062) and encloses the plant ovule(s) (PO:0020003). NMDCO_relaxed.owl PO:0025496 biolink:NamedThing multi-tissue plant structure A plant structure (PO:0009011) that has as parts two or more portions of plant tissue (PO:0009007) of at least two different types and which through specific morphogenetic processes forms a single structural unit demarcated by primarily bona-fide boundaries from other structural units of different types. NMDCO_relaxed.owl PO:0025497 biolink:NamedThing collective plant structure A plant structure (PO:0009011) that is a proper part of a whole plant (PO:0000003) and includes two or more adjacent plant organs (PO:0009008) or adjacent cardinal organ parts (PO:0025001), along with any associated portions of plant tissue (PO:0009007). NMDCO_relaxed.owl PO:0025498 biolink:NamedThing cardinal part of multi-tissue plant structure A plant structure (PO:0009011) that is a proper part of a multi-tissue plant structure (PO:0025496) and includes portions of plant tissues (PO:0009007) of at least two different types. NMDCO_relaxed.owl PO:0025549 biolink:NamedThing trichome tip A plant structure (PO:0009011) that is the apical most portion of a trichome apex (PO:0025550). NMDCO_relaxed.owl PO:0025550 biolink:NamedThing trichome apex A plant structure (PO:0009011) that is the apical most portion of a trichome (PO:0000282). NMDCO_relaxed.owl PO:0030078 biolink:NamedThing rhizoid A plant structure (PO:0009011) that is a uniseriate filament with positive geotropism that grows from an epidermis (PO:0005679) or protonema (PO:0030003). NMDCO_relaxed.owl PO:0000005 biolink:NamedThing cultured plant cell A plant cell (PO:0009002) that is grown or maintained in vitro. NMDCO_relaxed.owl PO:0000009 biolink:NamedThing cultured plant callus A plant callus (PO:0005052) grown or maintained in vitro. NMDCO_relaxed.owl PO:0000010 biolink:NamedThing cultured plant embryo A plant embryo (PO:0009009) that is grown or maintained in vitro. NMDCO_relaxed.owl PO:0025606 biolink:NamedThing native plant cell A plant cell (PO:0009002) that is either part of a multicellular whole plant (PO:0000003) 'in vivo' or a unicellular organism 'in natura' (i.e. part of a natural environment). NMDCO_relaxed.owl PO:0000006 biolink:NamedThing plant protoplast A cultured plant cell from which the entire plant cell wall has been removed. NMDCO_relaxed.owl PO:0000007 biolink:NamedThing leaf-derived cultured plant cell A cultured plant cell that was derived from leaf tissue. NMDCO_relaxed.owl PO:0000008 biolink:NamedThing root-derived cultured plant cell A cultured plant cell that was derived from root tissue. NMDCO_relaxed.owl PO:0005052 biolink:NamedThing plant callus A portion of plant tissue (PO:0009007) that consists of mass of undifferentiated plant cells (PO:0009002). NMDCO_relaxed.owl PO:0025302 biolink:NamedThing somatic plant embryo A plant embryo (PO:0009009) that arises from previously differentiated somatic cells, rather than from fused gametes, i.e. the plant zygote (PO:0000423). NMDCO_relaxed.owl PO:0025303 biolink:NamedThing zygotic plant embryo A plant embryo (PO:0009009) that forms as a result of the fusion of gametes. NMDCO_relaxed.owl PO:0000011 biolink:NamedThing cultured somatic plant embryo A somatic plant embryo grown and maintained in vitro. NMDCO_relaxed.owl PO:0025304 biolink:NamedThing cultured zygote-derived plant embryo A zygotic plant embryo that is grown or maintained in vitro. NMDCO_relaxed.owl PO:0004537 biolink:NamedThing nucellar plant embryo A somatic plant embryo derived directly from nucellus cells. NMDCO_relaxed.owl PO:0000012 biolink:NamedThing apical hook Hook-like structure which develops at the apical part of the hypocotyl in dark-grown seedlings in dicots. NMDCO_relaxed.owl PO:0025001 biolink:NamedThing cardinal organ part A cardinal part of multi-tissue plant structure (PO:0025498) that is a proper part of a plant organ (PO:0009008) and includes portions of plant tissue (PO:0009007) of at least two different types. NMDCO_relaxed.owl PO:0000025 biolink:NamedThing root tip A cardinal organ part (PO:0025001) which is the apical portion of the root (PO:0009005), and includes the root apical meristem (PO:0020147) and root cap (PO:0020123). NMDCO_relaxed.owl PO:0003000 biolink:NamedThing transition zone A region of the root between the meristem and the region of rapid elongation in which isodiametric growth (cell expansion) occurs. NMDCO_relaxed.owl PO:0003023 biolink:NamedThing root nodule A cardinal organ part (PO:0025001) that is an outgrowth of a root (PO:0009005) and is inhabited by nitrogen-fixing bacteria. NMDCO_relaxed.owl PO:0004724 biolink:NamedThing hypocotyl-root junction A cardinal organ part (PO:0025001) that is the part of a plant axis (PO:0025004) where a radicle (PO:0020031) joins a hypocotyl (PO:0020100). NMDCO_relaxed.owl PO:0005004 biolink:NamedThing shoot axis node A cardinal organ part (PO:0025001) of a shoot axis (PO:0025029) where a bud (PO:0000055) may form and develop into a branch (PO:0025073), leaf (PO:0025034), flower (PO:0004541), inflorescence (PO:0009049) or nodal root (PO:0003005). NMDCO_relaxed.owl PO:0005005 biolink:NamedThing shoot axis internode A cardinal organ part (PO:0025001) of a shoot axis (PO:0025029) that is between two shoot axis nodes (PO:0005004). NMDCO_relaxed.owl PO:0005660 biolink:NamedThing hydathode A cardinal organ part that releases water through a hydathode pore. NMDCO_relaxed.owl PO:0006033 biolink:NamedThing palea apiculus A cardinal organ part (PO:0025001) which is a short, abrupt, flexible point at the apex of the palea (PO:0009038). NMDCO_relaxed.owl PO:0006034 biolink:NamedThing leaflet margin A cardinal organ part (PO:0025001) that is the edge of a leaflet (PO:0020049) and the area immediately internally adjacent to it. NMDCO_relaxed.owl PO:0008019 biolink:NamedThing leaf lamina base The region of the leaf lamina proximal to the stem and usually connected to it by means of a petiole. NMDCO_relaxed.owl PO:0008020 biolink:NamedThing central zone of the leaf lamina Region that includes the widest or majority portion of leaf lamina and that does not include leaf apex and leaf lamina base. NMDCO_relaxed.owl PO:0008024 biolink:NamedThing petiole proximal end The region of the petiole proximal to its stem attachment site. NMDCO_relaxed.owl PO:0008025 biolink:NamedThing central zone of the petiole Regions of the petiole that does not include petiole distal end and petiole proximal end. NMDCO_relaxed.owl PO:0008026 biolink:NamedThing petiole distal end The region of the petiole distal to its stem attachment site or proximal to the leaf lamina. NMDCO_relaxed.owl PO:0008039 biolink:NamedThing stem base The basal part of stem. NMDCO_relaxed.owl PO:0009000 biolink:NamedThing pulvinus A cardinal organ part (PO:0025001) at the apex or base of a petiole, petiolule, leaf sheath, or branch that is differentiated from the remaining organ parts by its enlarged cross section. NMDCO_relaxed.owl PO:0009064 biolink:NamedThing receptacle A cardinal organ part (PO:0025001) that is the region at the distal end of either a peduncle or a pedicel where the floral appendages (e.g.: sepals, petals, stamens and pistils) are attached. NMDCO_relaxed.owl PO:0009065 biolink:NamedThing hypanthium A cup- or tube-shaped cardinal organ part, bearing perianth and stamens on its rim, so these arise above the base, and often above the top, of the ovary. NMDCO_relaxed.owl PO:0009068 biolink:NamedThing connective The part of the stamen that connects the microsporangia/pollen sacs. NMDCO_relaxed.owl PO:0009073 biolink:NamedThing stigma A cardinal organ part (PO:0025001), usually apical, that is part of a carpel (PO:0009030) or group of fused carpels on which the pollen (PO:0025281) germinates. NMDCO_relaxed.owl PO:0009074 biolink:NamedThing style A cardinal organ part (PO:0025001) which is an elongated part of a carpel (PO:0009030) or gynoecium (PO:0009062) between the plant ovary (PO:0009072) and the stigma (PO:0009073), and through which the pollen tube (GO:0090406) grows. NMDCO_relaxed.owl PO:0020027 biolink:NamedThing raphe A cardinal organ part (PO:0025001) that is a ridge on a plant ovule (PO:0020003) where a funicle (PO:0020006) is or was fused to the ovule. NMDCO_relaxed.owl PO:0020028 biolink:NamedThing antiraphe A cardinal organ part (PO:0025001) that is the part of a plant ovule (PO:0020003) on the opposite side from a raphe (PO:0020027). NMDCO_relaxed.owl PO:0020041 biolink:NamedThing stipule A cardinal organ part that is an appendage at the base of a vascular leaf. NMDCO_relaxed.owl PO:0020044 biolink:NamedThing hyperphyll The unifacial terete apical portion of a monocot cotyledon, sometimes also visible on other leaves. NMDCO_relaxed.owl PO:0020049 biolink:NamedThing leaflet A cardinal organ part (PO:0025001) that is one of the ultimate segments of a compound leaf (PO:0020043). NMDCO_relaxed.owl PO:0020051 biolink:NamedThing stipel Stipule-like appendage(s) at the base of a leaflet (in unifoliolate or simple leaves, found at the top of the petiole). NMDCO_relaxed.owl PO:0020062 biolink:NamedThing elaiosome A cardinal organ part that is an oil-secreting outgrowth of a seed or fruit. NMDCO_relaxed.owl PO:0020096 biolink:NamedThing egg apparatus A cardinal organ part that has as parts an egg cell and two synergids and is located at the micropylar end of the embryo sac. NMDCO_relaxed.owl PO:0020104 biolink:NamedThing leaf sheath A cardinal organ part (PO:0025001) that is the lower part of a vascular leaf (PO:0009025), and which more or less encases the stem (PO:0009047). NMDCO_relaxed.owl PO:0020105 biolink:NamedThing ligule A membranous or hairy appendage on the adaxial/upper surface of a leaf, at the junction between sheath and blade, especially in grasses. NMDCO_relaxed.owl PO:0020106 biolink:NamedThing leaf sheath auricle A cardinal organ part (PO:0025001) that is an ear-shaped outgrowth of the distal part of a leaf sheath (PO:0020104). NMDCO_relaxed.owl PO:0025005 biolink:NamedThing plant organ margin A cardinal organ part (PO:0025001) that is the edge of a plant organ (PO:0009008) and the area immediately internally adjacent to it. NMDCO_relaxed.owl PO:0025010 biolink:NamedThing petiole margin A cardinal organ part (PO:0025001) that is the edge of a petiole lamina (PO:0025129) and the area immediately internally adjacent to it. NMDCO_relaxed.owl PO:0025066 biolink:NamedThing stalk A cardinal organ part (PO:0025001) that is elongated and sub-cylindrical to cylindrical and supports another cardinal organ part. NMDCO_relaxed.owl PO:0025119 biolink:NamedThing plant axis differentiation zone A cardinal organ part that is part of a plant axis and is located behind the elongation zone and contains cells that are differentiating into their final form and function. NMDCO_relaxed.owl PO:0025139 biolink:NamedThing phyllome apex The apical portion of a phyllome. NMDCO_relaxed.owl PO:0025140 biolink:NamedThing phyllome base The basal part of a phyllome (PO:0006001), where it attaches to a shoot axis (PO:0025029). NMDCO_relaxed.owl PO:0025141 biolink:NamedThing phyllome tip The apical most portion of a phyllome apex. NMDCO_relaxed.owl PO:0025180 biolink:NamedThing plant axis elongation zone A cardinal organ part (PO:0025001) which is part of a plant axis (PO:0025004), is located proximal to an apical meristem (PO:0020144), and in which plant cells (PO:0009002) are undergoing longitudinal expansion. NMDCO_relaxed.owl PO:0025197 biolink:NamedThing stele A cardinal organ part (PO:0025001) that is the central column of a plant axis that consists of the primary vascular tissue and associated ground tissue. NMDCO_relaxed.owl PO:0025228 biolink:NamedThing valve A cardinal organ part that is a part of a plant structure that splits apart when the structure dehisces. NMDCO_relaxed.owl PO:0025306 biolink:NamedThing sporangium wall A cardinal organ part (PO:0025001) that is composed of the outer layers of a sporangium (PO:0025094) and bounds the archesporium (PO:0030074) or plant spores (PO:0025017). NMDCO_relaxed.owl PO:0025349 biolink:NamedThing awn A cardinal organ part that is a slender, more or less straight and stiff, fine-pointed, terminal or subterminal appendage of a glume, lemma, or palea. NMDCO_relaxed.owl PO:0025391 biolink:NamedThing phyllome lamina areole A cardinal organ part (PO:0025001) that is part of a phyllome lamina (PO:0025396) and is completely surrounded by phyllome lamina veins (PO:0025348) and cannot be divided into any smaller parts that are completely surrounded by phyllome lamina veins. NMDCO_relaxed.owl PO:0025394 biolink:NamedThing pappus element A cardinal organ part that is a segment of a pappus. NMDCO_relaxed.owl PO:0025439 biolink:NamedThing cambial zone A cardinal organ part (PO:0025001) that is part of a plant axis (PO:0025004) and has as parts a cambium (PO:0005597) and adjacent cells. NMDCO_relaxed.owl PO:0025511 biolink:NamedThing petal spur A cardinal organ part (PO:0025001) that is a slender, hollow extension of a petal (PO:0009032). NMDCO_relaxed.owl PO:0025513 biolink:NamedThing plant organ lamina A lamina (PO:0025060) that is part of a plant organ (PO:0009008). NMDCO_relaxed.owl PO:0025514 biolink:NamedThing phyllome lamina lobe A cardinal organ part (PO:0025001) that is a projection on a phyllome margin (PO:0025018) for which the corresponding phyllome sinus (PO:0025383) extends one quarter or more of the distance to the center of the long axis of the phyllome lamina (PO:0025396). NMDCO_relaxed.owl PO:0025515 biolink:NamedThing phyllome lamina tooth A cardinal organ part (PO:0025001) that is an angular projection on a phyllome margin (PO:0025018) for which the corresponding phyllome sinus (PO:0025383) extends less than one quarter of the distance to the center of the long axis of the phyllome lamina (PO:0025396). NMDCO_relaxed.owl PO:0025516 biolink:NamedThing phyllome lamina crena A cardinal organ part (PO:0025001) that is a rounded projection on a phyllome margin (PO:0025018) for which the corresponding phyllome sinus (PO:0025383) extends less than one quarter of the distance to the center of the long axis of the phyllome lamina (PO:0025396). NMDCO_relaxed.owl PO:0025616 biolink:NamedThing lemma apiculus A cardinal organ part (PO:0025001) which is a short, abrupt, flexible point at the apex of the lemma (PO:0009037). NMDCO_relaxed.owl PO:0025619 biolink:NamedThing leaf sheath margin A cardinal organ part (PO:0025001) that is the edge of a laminar portion of a leaf sheath (PO:0020104) and the area immediately internally adjacent to it. NMDCO_relaxed.owl PO:0030037 biolink:NamedThing spore capsule calyptra A cardinal organ part (PO:0025001) that develops from an archegonium (PO:0025126) and is a cap or hood enclosing the sporangium (syn: spore capsule; PO:0025094). NMDCO_relaxed.owl PO:0030038 biolink:NamedThing venter A cardinal organ part (PO:0025001) that is the enlarged basal part of an archegonium (PO:0025126) and has an archegonium egg cell (PO:0025122) located in it. NMDCO_relaxed.owl PO:0030039 biolink:NamedThing archegonium neck A cardinal organ part (PO:0025001) that is the elongated, apical part of an archegonium (PO:0025126). NMDCO_relaxed.owl PO:0030040 biolink:NamedThing sporangium base A cardinal organ part that is the basal (distal) part of a sporangium. NMDCO_relaxed.owl PO:0030041 biolink:NamedThing sporangium theca A cardinal organ part that is the main body of a sporangium and has spores located in it. NMDCO_relaxed.owl PO:0030042 biolink:NamedThing peristome A single or double circle of peristome teeth inside a sporangium mouth. NMDCO_relaxed.owl PO:0030043 biolink:NamedThing peristome tooth A cardinal organ part that is a single lobe of a peristome. NMDCO_relaxed.owl PO:0030044 biolink:NamedThing spore capsule operculum A cardinal organ part that is the apical part of a spore capsule that separates from the rest of the capsule during dehiscence. NMDCO_relaxed.owl PO:0030075 biolink:NamedThing antheridium head A disk-shaped cardinal organ part (PO:0025001) that is the apical portion of an antheridiophore (PO:0030033) and bears antheridia (PO:0025125). NMDCO_relaxed.owl PO:0030076 biolink:NamedThing archegonium head An umbrella-shaped cardinal organ part that is the apical portion of an archegoniophore and bears archegonia. NMDCO_relaxed.owl PO:0000013 biolink:NamedThing cauline leaf A vascular leaf (PO:0009025), borne on the stem (PO:0009047). NMDCO_relaxed.owl PO:0009025 biolink:NamedThing vascular leaf A leaf (PO:0025034) in a vascular plant. NMDCO_relaxed.owl PO:0000014 biolink:NamedThing rosette leaf A vascular leaf (PO:0009025) born in a circular pattern around a stem (PO:0009047) with compressed stem internodes (PO:0020142). NMDCO_relaxed.owl PO:0006339 biolink:NamedThing juvenile vascular leaf A vascular leaf that is distinct from adult leaves, being characterized by particular anatomical traits namely, wax and trichome distribution, presence or absence of epidermal cell types, cell wall shape and biochemistry. NMDCO_relaxed.owl PO:0006340 biolink:NamedThing adult vascular leaf A vascular leaf characterized by particular anatomical traits namely, wax and trichome distribution, presence or absence of epidermal cell types, cell wall shape and biochemistry. NMDCO_relaxed.owl PO:0008018 biolink:NamedThing transition vascular leaf A vascular leaf that is part of an heteroblastic series, and is characterized by anatomical features that are intermediate between juvenile and adult leaves. NMDCO_relaxed.owl PO:0020030 biolink:NamedThing cotyledon A vascular leaf (PO:0009025) formed at the first shoot node (PO:0005004) of a plant embryo (PO:0009009) or a seedling (PO:0000003). NMDCO_relaxed.owl PO:0020042 biolink:NamedThing simple leaf A leaf in which the lamina is undivided. NMDCO_relaxed.owl PO:0020043 biolink:NamedThing compound leaf A leaf having two or more distinct leaflets that are evident as such from early in development. NMDCO_relaxed.owl PO:0025130 biolink:NamedThing cigar leaf A leaf near the apex of a stem that is still rolled into a cylinder. NMDCO_relaxed.owl PO:0025173 biolink:NamedThing spine leaf A leaf that is a sclerified and pointed and lacks a lamina. NMDCO_relaxed.owl PO:0025328 biolink:NamedThing unifacial vascular leaf A vascular leaf that has increased activity of either the adaxial or abaxial meristem early in development, leading to absence of the opposite surface on the mature leaf. NMDCO_relaxed.owl PO:0025361 biolink:NamedThing leaf tendril A vascular leaf that is slender and coiling and lacks a lamina. NMDCO_relaxed.owl PO:0000015 biolink:NamedThing cotyledon primordium A phyllome primordium (PO:0025128) that develops from a cotyledon anlagen (PO:0025432) and is part of a vegetative shoot apex (PO:0025223) and is committed to the development of a cotyledon (PO:0020030). NMDCO_relaxed.owl PO:0025128 biolink:NamedThing phyllome primordium A primordium (PO:0025127) that develops from a phyllome anlagen (PO:0025430) and is part of a shoot apex (PO:0000037) and is committed to the development of a phyllome (PO:0006001). NMDCO_relaxed.owl PO:0000017 biolink:NamedThing vascular leaf primordium A phyllome primordium (PO:0025128) that develops from a vascular leaf anlagen (PO:0025431) and is part of a vegetative shoot apex (PO:0025223) and is committed to the development of a vascular leaf (PO:0009025). NMDCO_relaxed.owl PO:0000021 biolink:NamedThing petal primordium A phyllome primordium (PO:0025128) that develops from a petal anlagen (PO:0025484) and is committed to the development of a petal (PO:0009032). NMDCO_relaxed.owl PO:0004703 biolink:NamedThing carpel primordium A phyllome primordium (PO:0025128) that develops from a carpel anlagen (PO:0006005) and is committed to the development of a carpel (PO:0009030). NMDCO_relaxed.owl PO:0004704 biolink:NamedThing sepal primordium A phyllome primordium (PO:0025128) that develops from a sepal anlagen (PO:0025485) and is committed to the development of a sepal (PO:0009031). NMDCO_relaxed.owl PO:0004705 biolink:NamedThing stamen primordium A phyllome primordium (PO:0025128) that develops from a stamen anlagen (PO:0025486) and is committed to the development of a stamen (PO:0009029). NMDCO_relaxed.owl PO:0004725 biolink:NamedThing vascular leaf primordium abaxial side A portion of vascular leaf primordium (PO:0000017) that is distal to the axis of the shoot apical meristem (PO:0020148) and develops into the abaxial side of the leaf lamina (PO:0020039). NMDCO_relaxed.owl PO:0004726 biolink:NamedThing vascular leaf primordium adaxial side A portion of vascular leaf primordium (PO:0000017) that is proximal to the axis of the shoot apical meristem (PO:0020148) and develops into the adaxial side of the leaf lamina (PO:0020039). NMDCO_relaxed.owl PO:0008040 biolink:NamedThing lodicule primordium A phyllome primordium (PO:0025128)that develops from a lodicule anlagen (PO:0025483) and is committed to the development of a lodicule (PO:0009036). NMDCO_relaxed.owl PO:0025487 biolink:NamedThing bract primordium A phyllome primordium (PO:0025487) that is committed to the development of a flower bract (PO:0009055). NMDCO_relaxed.owl PO:0000016 biolink:NamedThing lateral root primordium A root primordium (PO:0005029) that is part of a root (PO:0009005) and is committed to the development of a lateral root (PO:0020121). NMDCO_relaxed.owl PO:0005029 biolink:NamedThing root primordium A primordium (PO:0025127) that develops from a root anlagen (PO:0025433) and is committed to the development of a root (PO:0009005). NMDCO_relaxed.owl PO:0025479 biolink:NamedThing basal root primordium A root primordium (PO:0005029) that is committed to the development of a basal root (PO:0025002). NMDCO_relaxed.owl PO:0025480 biolink:NamedThing shoot-borne root primordium A root primordium (PO:0005029) that is committed to the development of a shoot-borne root (PO:0000042). NMDCO_relaxed.owl PO:0000018 biolink:NamedThing ovule primordium A floral structure primordium (PO:0025477) that is committed to the development of an ovule (PO:0020003). NMDCO_relaxed.owl PO:0025477 biolink:NamedThing floral organ primordium A primordium (PO:0025127) that is committed to the development of a floral organ (PO:0025395) and is part of a reproductive shoot apex (PO:0025222). NMDCO_relaxed.owl PO:0000019 biolink:NamedThing gynoecium primordium A floral structure primordium (PO:0025477) that is committed to the development of a gynoecium (PO:0009062). NMDCO_relaxed.owl PO:0006089 biolink:NamedThing anther primordium A floral structure primordium (PO:0025477) that is committed to the development of an anther (PO:0009066). NMDCO_relaxed.owl PO:0025478 biolink:NamedThing androecium primordium A floral structure primordium (PO:0025477) that is committed to the development of an androecium (PO:0009061). NMDCO_relaxed.owl PO:0025488 biolink:NamedThing flower bract primordium A bract primordium (PO:0025128) is committed to the development of a flower bract (PO:0009034). NMDCO_relaxed.owl PO:0000022 biolink:NamedThing plant cuticle A portion of plant substance (PO:0025161) composed of cutin (PO:0025385), a polyester matrix of hydroxy- and hydroxy epoxy fatty acids C16 and C18 chains, embedded and overlayed with cuticular wax (PO:0025386) and forming a layer on the surface of a plant epidermis (PO:0005679). NMDCO_relaxed.owl PO:0025385 biolink:NamedThing cutin A portion of plant substance (PO:0025161) that is the inner layer of a plant cuticle (PO:0000022), and is composed of a polyester matrix of hydroxy- and hydroxy epoxy fatty acid C16 and C18 chains. NMDCO_relaxed.owl PO:0025386 biolink:NamedThing cuticular wax A portion of plant substance (PO:0025161) comprised predominantly of very long chain aliphatic lipids and is part of a plant cuticle (PO:0000022). NMDCO_relaxed.owl PO:0025387 biolink:NamedThing plant cuticle proper A portion of plant substance (PO:0025161) that is the inner layer of a plant cuticle (PO:0000022), composed primarily of cutin (PO:0025385), embedded and overlayed with cuticular wax (PO:0025386). NMDCO_relaxed.owl PO:0025538 biolink:NamedThing plant sap A portion of plant substance (PO:0025161) that is an aqueous solution that can be transported through the apoplast (GO:0048046) or symplast (GO:0055044). NMDCO_relaxed.owl PO:0025603 biolink:NamedThing plant resin A portion of plant substance (PO:0025161) that consists of a complex mixture of organic aromatic compounds such as mono-, sesqui-, and diterpenoids. NMDCO_relaxed.owl PO:0000026 biolink:NamedThing primary root tip The portion of the primary root including the meristem and root cap. NMDCO_relaxed.owl PO:0000027 biolink:NamedThing lateral root tip A root tip (PO:0000025) of a lateral root (PO:0020121). NMDCO_relaxed.owl PO:0000030 biolink:NamedThing septum A collective organ part structure composed of two or more layers of various tissues that is a partition that divides a cavity formed by the fusion of two or more organs. NMDCO_relaxed.owl PO:0025269 biolink:NamedThing collective organ part structure A collective plant structure (PO:0025497) composed of two or more cardinal organ parts (PO:0025001) that are part of adjacent plant organs (PO:0009008) and any associated portions of plant tissue (PO:0009007). NMDCO_relaxed.owl PO:0006488 biolink:NamedThing silk A collective organ part structure (PO:0025269) that has as parts an elongated stigma (PO:0009073) with stigma papilla (GO:0090397), and an elongated style (PO:0009074). NMDCO_relaxed.owl PO:0025248 biolink:NamedThing pseudostem A collective organ part structure that forms a cylindrical false stem composed concentric leaf sheaths. NMDCO_relaxed.owl PO:0025298 biolink:NamedThing fruit operculum A collective organ part structure that is the apical part of a circumsessile capsular fruit that separates from the rest of the capsule during dehiscence. NMDCO_relaxed.owl PO:0025393 biolink:NamedThing pappus A collective organ part structure that has a parts one or more pappus elements (scales, awns, or bristles) at the apex of an inferior ovary just beneath or outside the corolla. NMDCO_relaxed.owl PO:0025512 biolink:NamedThing corolla spur A collective organ part structure (PO:0025269) that is a slender, hollow extension of a corolla and has as parts segments of two more fused petals. NMDCO_relaxed.owl PO:0000031 biolink:NamedThing lenticel A portion of periderm tissue (PO:0005046) characterized by the presence of intercellular spaces between the cells of the phellem (PO:0004003) and phelloderm (PO:0005050) NMDCO_relaxed.owl PO:0005046 biolink:NamedThing periderm A peripheral portion of ground tissue (PO:0025059) in a plant axis (PO:0025004) that is composed of cork cambium (phellogen; PO:0005599), phellem (PO:0004003), and phelloderm (PO:0005050). NMDCO_relaxed.owl PO:0005047 biolink:NamedThing root periderm A portion of periderm tissue (PO:0005046) that is part of a root (PO:0009005). NMDCO_relaxed.owl PO:0005048 biolink:NamedThing shoot axis periderm A portion of periderm tissue (PO:0005046) that is part of a shoot axis (PO:0025029). NMDCO_relaxed.owl PO:0000032 biolink:NamedThing tetrad of microspores A portion of plant tissue consisting of four microspores that remained joined together shortly after meiosis. Each cell will give rise to a male gametophyte. NMDCO_relaxed.owl PO:0000146 biolink:NamedThing abscission zone A portion of plant tissue (PO:0009007) that has as part a separation layer (PO:0006211) and a protective layer (PO:0006212), and is involved in the abscission (GO:0009838) of a fruit (PO:0009001), flower (PO:0009046), leaf (PO:0025034) or other plant structure (PO:0009011). NMDCO_relaxed.owl PO:0000200 biolink:NamedThing micropylar endosperm A portion of plant tissue (PO:0009007) that is the region of the endosperm closest to the micropyle of the seed. NMDCO_relaxed.owl PO:0000201 biolink:NamedThing chalazal cyst A portion of plant tissue (PO:0009007) that is the part of the endosperm (PO:0009089) nearest the chalazal region of the plant ovule (PO:0020003) and forming a cyst-like structure. NMDCO_relaxed.owl PO:0004518 biolink:NamedThing bark A portion of plant tissue (PO:0009007) outside the vascular cambium (PO:0005598) or the xylem (PO:0005352); in older trees may be divided into dead outer bark and living inner bark, which consists of secondary phloem (PO:0005043). NMDCO_relaxed.owl PO:0005022 biolink:NamedThing plant ovary wall A portion of plant tissue (PO:0009007) that is composed of plant ovary outer epidermis (PO:0005023), plant ovary inner epidermis (PO:0005024), and a plant ovary wall middle layer (PO:0005025) NMDCO_relaxed.owl PO:0005360 biolink:NamedThing aleurone layer A portion of plant tissue (PO:0009007) that is the outermost layer of endosperm (PO:0009089) in a seed (PO:0009010), its cells being characterized by presence of protein bodies (GO:0042735). NMDCO_relaxed.owl PO:0005656 biolink:NamedThing portion of secretory tissue A portion of plant tissue (PO:0009007) that form specialized structures producing a secretion. NMDCO_relaxed.owl PO:0005679 biolink:NamedThing plant epidermis A portion of plant tissue (PO:0009007) composed of epidermal cells (PO:0004013) that develops from the protoderm (PO:0006210) and covers the surface of a plant structure (PO:0009011).|A portion of plant tissue (PO:0009007) composed of plant epidermal cells (PO:0004013) that develops from the protoderm (PO:0006210) and covers the surface of a plant structure (PO:0009011). NMDCO_relaxed.owl PO:0006013 biolink:NamedThing juice sac tissue A portion of plant tissue (PO:0009007) which is composed of highly vacuolated cells forming closely-packed, club-shaped sacs with long slender stalks and containing juice. NMDCO_relaxed.owl PO:0006084 biolink:NamedThing portion of transfusion tissue Tissue consisting of tracheids and parenchyma cells, associated with the vascular bundle. NMDCO_relaxed.owl PO:0006211 biolink:NamedThing separation layer A portion of plant tissue (PO:0009007) that is part of an abscission zone (PO:0000146) and contains cells that develop an abnormal wall chemistry and swelling resulting in their easily being pulled apart along the pectin-rich middle lamella (GO:0009519). NMDCO_relaxed.owl PO:0006212 biolink:NamedThing protective layer A portion of plant tissue (PO:0009007) composed of a layer of cells that is part of the abscission zone (PO:0000146) that have lignin and suberin depositions and are found on the axial side of the break or exposed surface of abscission. NMDCO_relaxed.owl PO:0006220 biolink:NamedThing central endosperm A portion of plant tissue (PO:0009007) that is the central region of an endosperm (PO:0009089), composed of cells that are significantly larger than those at the periphery, especially the aleurone and sub-aleurone layers. NMDCO_relaxed.owl PO:0006333 biolink:NamedThing seed chalaza A remnant of the ovular chalaza that is part of the seed. NMDCO_relaxed.owl PO:0006336 biolink:NamedThing seed obturator An outgrowth of the seed funicle, that forms a bridge between the seed micropyle and other tissues. It is also a remnant form of the obturator found in the ovular funicle. NMDCO_relaxed.owl PO:0008007 biolink:NamedThing nucellar projection A portion of plant tissue (PO:0009007) that is the morphologically distinct portion of the nucellus overlying the vascular strands in the grass caryopsis. NMDCO_relaxed.owl PO:0008009 biolink:NamedThing abaxial nucellar projection A portion of plant tissue (PO:0009007) that is the abaxial/lower portion of the nucellus (PO:0020020) overlying vascular strands in a caryopsis fruit (PO:0030104). NMDCO_relaxed.owl PO:0008010 biolink:NamedThing adaxial nucellar projection A portion of plant tissue (PO:0009007) that is the adaxial/upper portion of the nucellus (PO:0020020) overlying vascular strands in a caryopsis fruit (PO:0030104). NMDCO_relaxed.owl PO:0009013 biolink:NamedThing portion of meristem tissue A portion of plant tissue (PO:0009007) in which plant cells (PO:0009002) have retained their embryonic characteristics, or have reverted to them secondarily, and that divide to produce new cells that can undergo differentiation to form mature tissues, i.e. they have a capacity for morphogenesis and growth. NMDCO_relaxed.owl PO:0009015 biolink:NamedThing portion of vascular tissue A portion of plant tissue (PO:0009007) that has as part one or more tracheary elements (PO:0000290) or sieve elements (PO:0025406). NMDCO_relaxed.owl PO:0009084 biolink:NamedThing pericarp A portion of plant tissue (PO:0009007) that is the outer layer (wall) of a fruit (PO:0009001), and develops from a plant ovary (PO:0009072) or a carpel (PO:0009030) wall. NMDCO_relaxed.owl PO:0009085 biolink:NamedThing exocarp A portion of plant tissue (PO:0009007) that is the outer layer of a pericarp (PO:0009084). NMDCO_relaxed.owl PO:0009086 biolink:NamedThing endocarp A portion of plant tissue (PO:0009007) that is the innermost differentiated layer of a pericarp (PO:0009084). NMDCO_relaxed.owl PO:0009087 biolink:NamedThing mesocarp A portion of plant tissue (PO:0009007) that is the middle layer of a pericarp (PO:0009084). NMDCO_relaxed.owl PO:0009088 biolink:NamedThing seed coat A portion of plant tissue that is the covering of a seed derived from ovular - mainly integumentary - tissue. NMDCO_relaxed.owl PO:0009089 biolink:NamedThing endosperm A portion of plant tissue (PO:0009007) which is a maximal portion of nutritive plant tissue in a seed (PO:0009010). NMDCO_relaxed.owl PO:0019024 biolink:NamedThing seed operculum A plug-like structure formed in the micropylar region of the seed coat. NMDCO_relaxed.owl PO:0020021 biolink:NamedThing plant ovule integument A portion of plant tissue (PO:0009007) that covers a plant ovule (PO:0020003), enveloping a nucellus (PO:0020020) and forming a micropyle (PO:0020025) at the apex. NMDCO_relaxed.owl PO:0020024 biolink:NamedThing endothelium A portion of plant tissue (PO:0009007) which is composed of cells of the inner epidermis of the inner (or only) integument of the ovule that are radially elongated and metabolically very active. NMDCO_relaxed.owl PO:0020026 biolink:NamedThing chalaza A portion of plant tissue (PO:0009007) that is the region in a plant ovule (PO:0020003) where the integuments (PO:0020021) and the nucellus (PO:0020020) join with the funicule (PO:0020006). NMDCO_relaxed.owl PO:0020029 biolink:NamedThing obturator A portion of plant tissue (PO:0009007) which is an outgrowth of the funicle, that forms a bridge between the micropyle and other tissues. NMDCO_relaxed.owl PO:0020036 biolink:NamedThing epiblast A portion of plant tissue (PO:0009007) that is a flap-like projection of the coleorhiza (PO:0020034), inserted opposite the scutellum (PO:0020110). NMDCO_relaxed.owl PO:0020056 biolink:NamedThing tegmen That part of the seed coat that develops from the inner integument. NMDCO_relaxed.owl PO:0020057 biolink:NamedThing testa That part of the seed coat that develops from the outer integument, or from the single integument when there is only one. NMDCO_relaxed.owl PO:0020058 biolink:NamedThing perisperm A portion of plant tissue (PO:0009007) which is diploid nutritive tissue in an angiosperm seed derived from nucellar tissue. NMDCO_relaxed.owl PO:0025059 biolink:NamedThing portion of ground tissue Any portion of plant tissue (PO:0009007) other than epidermis (PO:0005679) or vascular tissue (PO:0009015). NMDCO_relaxed.owl PO:0025078 biolink:NamedThing placenta A portion of plant tissue (PO:0009007) at the interface between two plant structures, one of which is in a gametophyte development stage (PO:0028003) and one of which is in a sporophyte development stage (PO:0028002), and that has as parts transfer cells (PO:0000078). NMDCO_relaxed.owl PO:0025092 biolink:NamedThing dehiscence zone A portion of plant tissue (PO:0009007) that is part of a plant structure and consists of a narrow band of cells that undergoes dehiscence upon maturation of the structure. NMDCO_relaxed.owl PO:0025162 biolink:NamedThing multicellular trichome A portion of plant tissue (PO:0009007) that forms a non-sclerified outgrowth from the epidermis (PO:0005679). NMDCO_relaxed.owl PO:0025196 biolink:NamedThing basal endosperm transfer layer A portion of plant tissue (PO:0009007) that is part of an endosperm (PO:0009089) and is composed of basal endosperm transfer cells (PO:0009018). NMDCO_relaxed.owl PO:0025227 biolink:NamedThing tetrad of megaspores A portion of plant tissue consisting of four megaspores that remained joined together shortly after meiosis. One cell will give rise to a female gametophyte. NMDCO_relaxed.owl PO:0025230 biolink:NamedThing columella A portion of plant tissue (PO:0009007) that forms the central axis of a plant structure such as a fruit (PO:0009001) or moss capsule (sporangium; PO:0025094). NMDCO_relaxed.owl PO:0025318 biolink:NamedThing axillary hair base A portion of plant tissue (PO:0009007) that is the basal part of an axillary hair (PO:0025316), below the axillary hair terminal cell (PO:0025317). NMDCO_relaxed.owl PO:0025535 biolink:NamedThing multicellular trichome tip A portion of plant tissue (PO:0009007) that is the apical most portion of a multicellular trichome apex (PO:0025551). NMDCO_relaxed.owl PO:0025609 biolink:NamedThing shoot axis tegument layer A portion of plant tissue (PO:0009007) that forms a tough, protective outer layer on a shoot axis and includes as parts a shoot axis hypodermis (PO:0005057) and a shoot axis epidermis (PO:0000112). NMDCO_relaxed.owl PO:0025614 biolink:NamedThing gemma A portion of plant tissue (PO:0009007) which is a small ball of cells born on a thallus (PO:0030027) and is involved in asexual reproduction. NMDCO_relaxed.owl PO:0025626 biolink:NamedThing plant gall A portion of plant tissue (PO:0009007) that develops in response an organism for the benefit of that organism. NMDCO_relaxed.owl PO:0030047 biolink:NamedThing hydrome A portion of plant tissue (PO:0009007) that has as parts hydroid (PO:0025032) cells and cells of no other types. NMDCO_relaxed.owl PO:0030048 biolink:NamedThing leptome A portion of plant tissue (PO:0009007) that has as parts leptoid (PO:0025033) cells and cells of no other types. NMDCO_relaxed.owl PO:0030051 biolink:NamedThing central strand A portion of plant tissue (PO:0009007) that is an axial strand in the center of a gametophore axis (PO:0030020) or seta (PO:0030032) and has as part a hydrome (PO:0030047) or a leptome (PO:0030048). NMDCO_relaxed.owl PO:0030053 biolink:NamedThing antheridium jacket layer A portion of plant tissue (PO:0009007) that is a single layer of cells on the outside of an antheridium (PO:0025125). NMDCO_relaxed.owl PO:0030061 biolink:NamedThing tmema A portion of plant tissue (PO:0009007) that has as parts tmema cells (PO:0030059). NMDCO_relaxed.owl PO:0030072 biolink:NamedThing costa A portion of plant tissue (PO:0009007) that is a single or double strand in the center of a non-vascular leaf (PO:0025075) and has as part hydrome (PO:0030047) or leptome (PO:0030048). NMDCO_relaxed.owl PO:0030074 biolink:NamedThing archesporium A portion of plant tissue (PO:0009007) that is the internal part of a sporangium (PO:0025094), bounded by the sporangium wall (PO:0025306), and has as parts archesporial cells (PO:0030056). NMDCO_relaxed.owl PO:0030084 biolink:NamedThing amphithecium A portion of plant tissue (PO:0009007) that is the outer layer or layers of a sporangium (PO:0025094) early in sporangium development (GO:0043582). NMDCO_relaxed.owl PO:0000033 biolink:NamedThing fruit valve A valve that is a part of a fruit that splits apart when the fruit dehisces. NMDCO_relaxed.owl PO:0025229 biolink:NamedThing spore capsule valve A valve that is a part of a spore capsule that splits apart when the spore capsule dehisces. NMDCO_relaxed.owl PO:0000034 biolink:NamedThing vascular system A maximal portion of vascular tissue (PO:0009015) in a whole plant (PO:0000003), collective plant structure (PO:0025497), multi-tissue plant structure (PO:0025496), or cardinal part of multi-tissue plant structure (PO:0025498). NMDCO_relaxed.owl PO:0005020 biolink:NamedThing vascular bundle A portion of vascular tissue (PO:0009015) that is a unit strand of the vascular system (PO:0000034) and has as part xylem (PO:0005352) or phloem (PO:0005417). NMDCO_relaxed.owl PO:0005352 biolink:NamedThing xylem A portion of vascular tissue (PO:0009015) that has as part one or more tracheary elements (PO:0000290). NMDCO_relaxed.owl PO:0005417 biolink:NamedThing phloem A portion of vascular tissue (PO:0009015) that has as parts sieve elements (PO:0025406). NMDCO_relaxed.owl PO:0025408 biolink:NamedThing primary vascular tissue A portion of vascular tissue (PO:0009015) that develops from a procambium (PO:0025275). NMDCO_relaxed.owl PO:0025409 biolink:NamedThing secondary vascular tissue A portion of vascular tissue (PO:0009015) that develops from a vascular cambium (PO:0005598). NMDCO_relaxed.owl PO:0000035 biolink:NamedThing cotyledon vascular system A vascular system (PO:0000034) that is part of a cotyledon (PO:0020030). NMDCO_relaxed.owl PO:0000039 biolink:NamedThing shoot axis vascular system A vascular system (PO:0000034) that includes the totality of the portions of vascular tissue in their specific arrangement in a shoot axis (PO:0025029). NMDCO_relaxed.owl PO:0000048 biolink:NamedThing leaf lamina vascular system A vascular system (PO:0000034) that includes the totality of the portions of vascular tissue in their specific arrangement in a leaf lamina (PO:0020039). NMDCO_relaxed.owl PO:0000052 biolink:NamedThing petiole vascular system A vascular system (PO:0000034) that includes the totality of the portions of vascular tissue in their specific arrangement in a petiole (PO:0020038). NMDCO_relaxed.owl PO:0003011 biolink:NamedThing root vascular system A vascular system (PO:0000034) that includes the totality of the portions of vascular tissue in their specific arrangement in a root (PO:0009005). NMDCO_relaxed.owl PO:0008003 biolink:NamedThing fruit vascular system A vascular system (PO:0000034) that includes the totality of the portions of vascular tissue (PO:0009015) in their specific arrangement in a fruit (PO:0009001). NMDCO_relaxed.owl PO:0008011 biolink:NamedThing plant embryo vascular system A vascular system (PO:0000034) that is part of a plant embryo (PO:0009009) . NMDCO_relaxed.owl PO:0008012 biolink:NamedThing stigma vascular system A vascular system (PO:0000034) that includes the totality of the portions of vascular tissue in their specific arrangement in a stigma (PO:0009073). NMDCO_relaxed.owl PO:0008014 biolink:NamedThing filament vascular system A vascular system (PO:0000034) that includes the totality of the portions of vascular tissue (PO:0009015) in their specific arrangement in a filament (PO:0009067). NMDCO_relaxed.owl PO:0008015 biolink:NamedThing hypocotyl vascular system A vascular system (PO:0000034) that is part of a hypocotyl (PO:0020100). NMDCO_relaxed.owl PO:0008047 biolink:NamedThing scutellum vascular system A vascular system (PO:0000034) that is part of a scutellum (PO:0020110). NMDCO_relaxed.owl PO:0025205 biolink:NamedThing shoot system vascular system A vascular system (PO:0000034) that is part of a shoot system (PO:0009006). NMDCO_relaxed.owl PO:0025206 biolink:NamedThing phyllome vascular system A vascular system (PO:0000034) that includes the totality of the portions of vascular tissue in their specific arrangement in a phyllome (PO:0006001). NMDCO_relaxed.owl PO:0000036 biolink:NamedThing leaf vascular system A phyllome vascular system (PO:0025206) that includes the totality of the portions of vascular tissue in their specific arrangement in a vascular leaf (PO:0009025). NMDCO_relaxed.owl PO:0000054 biolink:NamedThing petal vascular system A phyllome vascular system (PO:0025206) that includes the totality of the portions of vascular tissue in their specific arrangement in a petal (PO:0025218). NMDCO_relaxed.owl PO:0004723 biolink:NamedThing sepal vascular system A phyllome vascular system (PO:0025206) that includes the totality of the portions of vascular tissue in their specific arrangement in a sepal (PO:0009031). NMDCO_relaxed.owl PO:0005018 biolink:NamedThing stamen vascular system A phyllome vascular system (PO:0025206) that includes the totality of the portions of vascular tissue in their specific arrangement in a stamen (PO:0009029). NMDCO_relaxed.owl PO:0005019 biolink:NamedThing carpel vascular system A phyllome vascular system (PO:0025206) that includes the totality of the portions of vascular tissue in their specific arrangement in a carpel (PO:0009030). NMDCO_relaxed.owl PO:0008013 biolink:NamedThing anther vascular system A phyllome vascular system (PO:0025206) that includes the totality of the portions of vascular tissue in their specific arrangement in an anther (PO:0009066). NMDCO_relaxed.owl PO:0025207 biolink:NamedThing tepal vascular system A phyllome vascular system (PO:0025206) that includes the totality of the portions of vascular tissue in their specific arrangement in a tepal (PO:0009033). NMDCO_relaxed.owl PO:0000037 biolink:NamedThing shoot axis apex A shoot axis (PO:0025029) that is the most distal part of a shoot system (PO:0009006) and has as parts a shoot apical meristem (PO:0020148) and the youngest primordia (PO:0025127). NMDCO_relaxed.owl PO:0025029 biolink:NamedThing shoot axis A plant axis (PO:0025004) that is part of a shoot system (PO:0009006). NMDCO_relaxed.owl PO:0004542 biolink:NamedThing rhizome A swollen shoot axis (PO:0025029) that grows horizontally at or below the substrate surface and produces shoots above and roots or rhizoids below. NMDCO_relaxed.owl PO:0004543 biolink:NamedThing shoot axis tuber A shoot axis (PO:0025029) that develops from a branch (PO:0025073) and is radially enlarged for storage. NMDCO_relaxed.owl PO:0006330 biolink:NamedThing gynophore A shoot axis (PO:0025029) that is an elongation of the floral axis that supports the carpel (PO:0009030). NMDCO_relaxed.owl PO:0009047 biolink:NamedThing stem A shoot axis (PO:0025029) that is the primary axis of a plant. NMDCO_relaxed.owl PO:0009053 biolink:NamedThing peduncle A shoot axis that extends from the last foliage leaf on a stem or branch until the next distal node. NMDCO_relaxed.owl PO:0020122 biolink:NamedThing inflorescence axis A shoot axis (PO:0025029) that is part of an inflorescence (PO:0009049). NMDCO_relaxed.owl PO:0025073 biolink:NamedThing branch A shoot axis (PO:00025029) that develops from an axillary bud meristem (PO:0000232) or from equal divisions of a meristematic apical cell (PO:0030007). NMDCO_relaxed.owl PO:0025242 biolink:NamedThing infructescence axis A shoot axis (PO:0025029) that is part of an infructescence (PO:0006342). NMDCO_relaxed.owl PO:0025354 biolink:NamedThing cladode A shoot axis that is flattened and expanded. NMDCO_relaxed.owl PO:0025365 biolink:NamedThing stem apex tendril A shoot axis that arises from the apical part of a stem and is slender and coiling. NMDCO_relaxed.owl PO:0025534 biolink:NamedThing adventitious shoot axis A shoot axis (PO:00025029) that develops in an unusual place. NMDCO_relaxed.owl PO:0030020 biolink:NamedThing gametophore axis A shoot axis (PO:0025029) that is part of a gametophore (PO:0030018). NMDCO_relaxed.owl PO:0030112 biolink:NamedThing pedicel A shoot axis (PO:0025029) that bears only a flower (PO:0009046) or a fruit (PO:0009001). NMDCO_relaxed.owl PO:0000038 biolink:NamedThing primary endosperm cell Cell produced by the fusion of sperm cell nucleus and two polar nuclei of the central cell (or diploid secondary endosperm nucleus, in cases where two polar nuclei fuse together before double fertilization). The first cell of the endosperm, often triploid. NMDCO_relaxed.owl PO:0025026 biolink:NamedThing embryo sac cell A native plant cell (PO:0025606) that is part of an embryo sac (PO:0025074). NMDCO_relaxed.owl PO:0000191 biolink:NamedThing synergid Cell, usually two in number, in the micropylar end of the embryo sac of angiosperms associated with the egg in the egg apparatus. NMDCO_relaxed.owl PO:0020090 biolink:NamedThing embryo sac central cell An embryo sac cell (PO:0025026) that is largest cell in a mature embryo sac (PO:0025074). NMDCO_relaxed.owl PO:0020093 biolink:NamedThing antipodal cell Cell, commonly three in number as in the eight-nucleate embryo sac, located at the other end of the embryo sac from the egg cell. NMDCO_relaxed.owl PO:0025123 biolink:NamedThing embryo sac egg cell A plant egg cell (PO:0020094) that is part of an egg apparatus (PO:0020096). NMDCO_relaxed.owl PO:0000040 biolink:NamedThing adventitious root nodule Enlargement or swelling at position of dormant adventitious root primordium (on the stem), inhabited by nitrogen-fixing bacteria. NMDCO_relaxed.owl PO:0004538 biolink:NamedThing indeterminate nodule A root nodule characterized by a persistent meristem, presence of vascular transfer cells, and cell division in the inner cortex with non-dividing infected cells and bacteria. NMDCO_relaxed.owl PO:0004539 biolink:NamedThing determinate nodule A root nodule characterized by a dividing infected cells and bacteria, vascular transfer cells absent and cell division is in the outer cortex. NMDCO_relaxed.owl PO:0000041 biolink:NamedThing epidermal cork cell One of the two types of short cells in the epidermis of grasses and bamboos. It is usually paired with silica cell. NMDCO_relaxed.owl PO:0004718 biolink:NamedThing short cell An isodiametric leaf pavement cell. NMDCO_relaxed.owl PO:0004009 biolink:NamedThing silica cell Cells with deposits of silica in them. One of the two types of short cells in the epidermis of grasses and bamboos. It is usually paired with epidermal cork cell. NMDCO_relaxed.owl PO:0000042 biolink:NamedThing shoot-borne root A root (PO:0009005) that develops from shoot axis (PO:0025029) tissue. NMDCO_relaxed.owl PO:0000045 biolink:NamedThing embryo root A root (PO:0009005) that is initiated in a developing plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0000067 biolink:NamedThing proteoid root A root (PO:0009005) that forms one or more clusters of closely spaced lateral roots (PO:0020121) of limited growth along its length. NMDCO_relaxed.owl PO:0020121 biolink:NamedThing lateral root A root (PO:0009005) that develops from a lateral root primordium (PO:0000016) that is part of another root on the same plant. NMDCO_relaxed.owl PO:0020127 biolink:NamedThing primary root A root (PO:0009005) that develops directly from a seedling radicle (PO:0020127). NMDCO_relaxed.owl PO:0025476 biolink:NamedThing tuberous root tuber A root (PO:0009005) that develops from a tuberous root (PO:0025523) and is further radially enlarged for storage. NMDCO_relaxed.owl PO:0025523 biolink:NamedThing tuberous root A root (PO:0009005) that is radially enlarged relative to other lateral roots (PO:0020121) or shoot-borne roots (PO:0000042) on the same plant, but not as enlarged as a tuberous root tuber (PO:0025476). NMDCO_relaxed.owl PO:0000043 biolink:NamedThing crown root A shoot-borne nodal root (PO:0003005) formed at a stem base (PO:0008039). NMDCO_relaxed.owl PO:0003005 biolink:NamedThing shoot-borne nodal root A shoot-borne root (PO:0000042) that forms at a shoot axis node (PO:0005004). NMDCO_relaxed.owl PO:0000044 biolink:NamedThing prop root A shoot-borne nodal root (PO:0003005) formed at a stem node (PO:0020141) above the ground and growing directly into the soil. NMDCO_relaxed.owl PO:0000046 biolink:NamedThing seminal root An embryo root (PO:0000045) formed within the scutellar node (PO:0004708) of the plant embryo (PO:0009009) in some monocotyledonous plants. NMDCO_relaxed.owl PO:0020031 biolink:NamedThing radicle An embryo root (PO:0000045) that is the basal continuation of a hypocotyl (PO:0020100) in a plant embryo (PO:0009009) or a seedling (PO:0000003). NMDCO_relaxed.owl PO:0000047 biolink:NamedThing leaf lamina epidermis A portion of leaf epidermis (PO:0006016) that is part of a leaf lamina (PO:0020039). NMDCO_relaxed.owl PO:0006016 biolink:NamedThing leaf epidermis A portion of phyllome epidermis (PO:0025157) that is part of a leaf (PO:0025034). NMDCO_relaxed.owl PO:0000051 biolink:NamedThing petiole epidermis A portion of leaf epidermis (PO:0006016) that is part of a petiole (PO:0020038). NMDCO_relaxed.owl PO:0006018 biolink:NamedThing leaf adaxial epidermis A portion of leaf epidermis (PO:0006016) that covers the adaxial/upper surface of a leaf (PO:0025034). NMDCO_relaxed.owl PO:0006019 biolink:NamedThing leaf abaxial epidermis A portion of leaf epidermis (PO:0006016) that covers the abaxial/lower surface of a leaf (PO:0025034). NMDCO_relaxed.owl PO:0006056 biolink:NamedThing cotyledon epidermis A portion of leaf epidermis (PO:0006016) that is part of a cotyledon (PO:0020030). NMDCO_relaxed.owl PO:0025175 biolink:NamedThing leaf prickle A prickle (PO:0025169) that is part of a leaf (PO:0025034). NMDCO_relaxed.owl PO:0025183 biolink:NamedThing leaf stomatal complex A phyllome stomatal complex (PO:0025215) that is part of a leaf. NMDCO_relaxed.owl PO:0025249 biolink:NamedThing leaf sheath epidermis A portion of leaf epidermis (PO:0006016) that is part of a leaf sheath (PO:0020104). NMDCO_relaxed.owl PO:0000049 biolink:NamedThing leaf lamina abaxial epidermis A portion of leaf lamina epidermis (PO:0000047) that covers the abaxial/lower surface of a leaf lamina (PO:0020039). NMDCO_relaxed.owl PO:0000050 biolink:NamedThing leaf lamina adaxial epidermis A portion of leaf lamina epidermis (PO:0000047) that covers the adaxial/upper surface of a leaf lamina (PO:0020039). NMDCO_relaxed.owl PO:0025185 biolink:NamedThing leaf lamina stomatal complex A leaf stomatal complex that is part of a leaf lamina. NMDCO_relaxed.owl PO:0000053 biolink:NamedThing petiole cortex A portion of cortex (PO:0005708) that is part of a petiole (PO:0020038). NMDCO_relaxed.owl PO:0005708 biolink:NamedThing cortex A maximal portion of ground tissue (PO:0025059) between the vascular system (PO:0000034) and the epidermis (PO:0005679) in a plant. NMDCO_relaxed.owl PO:0000223 biolink:NamedThing shoot axis cortex A portion of cortex (PO:0005708) that is part of a shoot axis (PO:0025029). NMDCO_relaxed.owl PO:0000258 biolink:NamedThing root cortex A portion of cortex (PO:0005708) that is part of a root (PO:0009005). NMDCO_relaxed.owl PO:0004721 biolink:NamedThing paraclade cortex A portion of cortex (PO:0005708) that is part of a higher order inflorescence axis (PO:0009081), also called a paraclade. NMDCO_relaxed.owl PO:0004722 biolink:NamedThing pedicel cortex A portion of cortex (PO:0005708) that is part of a pedicel (PO:0030112). NMDCO_relaxed.owl PO:0005014 biolink:NamedThing embryo cortex A portion of cortex (PO:0005708) that is part of a plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0025055 biolink:NamedThing tuber cortex A portion of cortex (PO:0005708) that is part of a tuber storage parenchyma (PO:0025036). NMDCO_relaxed.owl PO:0025591 biolink:NamedThing receptacle cortex A portion of cortex (PO:0005708) that is part of a receptacle (PO:0009064). NMDCO_relaxed.owl PO:0000055 biolink:NamedThing bud An undeveloped shoot system (PO:0009006). NMDCO_relaxed.owl PO:0009006 biolink:NamedThing shoot system A collective plant organ structure (PO:0025007) that produces shoot-borne portions of meristem tissue (PO:0009013) and the plant structures (PO:0009011) that arise from them. NMDCO_relaxed.owl PO:0004544 biolink:NamedThing root-borne shoot system A shoot system that is initiated from a root. NMDCO_relaxed.owl PO:0004545 biolink:NamedThing shoot-borne shoot system A shoot system that is initiated from a shoot. NMDCO_relaxed.owl PO:0006341 biolink:NamedThing primary shoot system A shoot system (PO:0009006) that develops from an embryo shoot apical meristem (PO:0006362). NMDCO_relaxed.owl PO:0025082 biolink:NamedThing reproductive shoot system A shoot system (PO:0009006) in the sporophytic phase that has as part at least one sporangium (PO:0025094). NMDCO_relaxed.owl PO:0025134 biolink:NamedThing inflorescence branch crown A shoot system that forms the basal part of an inflorescence to which the pedicels are attached and in which the internodes do not elongate, giving the appearance of a ridge of raised tissue. NMDCO_relaxed.owl PO:0025355 biolink:NamedThing corm A shoot system (PO:0009006) that has as parts a short, enlarged stem (PO:0009047) in which the shoot internodes (PO:0005005) do not elongate, and one or more buds (PO:0000055). NMDCO_relaxed.owl PO:0025356 biolink:NamedThing bulb A short, enlarged shoot system (PO:0009006) that has as parts a short stem (PO:0009047) in which the shoot internodes (PO:0005005) do not elongate, and one or more buds (PO:0000055) enclosed by fleshy leaves (PO:0009025) or leaf bases (PO:0020040). NMDCO_relaxed.owl PO:0025607 biolink:NamedThing vegetative shoot system A shoot system (PO:0009006) that has as parts only vegetative tissues and organs. NMDCO_relaxed.owl PO:0030018 biolink:NamedThing gametophore A shoot system (PO:0009006) that consists of the shoot axes (PO:0025029) and non-vascular leaves (PO:0025075) of a plant in the gametophyte development stage (PO:0028003) . NMDCO_relaxed.owl PO:0000056 biolink:NamedThing flower bud A bud that develops into a flower. NMDCO_relaxed.owl PO:0025084 biolink:NamedThing reproductive bud A bud that develops into a reproductive shoot system. NMDCO_relaxed.owl PO:0000057 biolink:NamedThing inflorescence bud A bud that develops into an inflorescence. NMDCO_relaxed.owl PO:0025071 biolink:NamedThing terminal reproductive bud A terminal bud that develops into a reproductive structure. NMDCO_relaxed.owl PO:0025072 biolink:NamedThing axillary reproductive bud An axillary bud (PO:0004709) that develops into an reproductive shoot system (PO:0025082). NMDCO_relaxed.owl PO:0025085 biolink:NamedThing strobilus bud A bud that develops into a strobilus. NMDCO_relaxed.owl PO:0000058 biolink:NamedThing vegetative bud A bud (PO:0000055) that develops into a vegetative shoot system (PO:0025607). NMDCO_relaxed.owl PO:0004709 biolink:NamedThing axillary bud A bud (PO:0000055) that develops from an axillary bud meristem (PO:0000232). NMDCO_relaxed.owl PO:0004713 biolink:NamedThing terminal bud A bud that develops from a shoot apical meristem. NMDCO_relaxed.owl PO:0000059 biolink:NamedThing root initial cell An initial cell (PO:0004011) that is part of a root apical meristem (PO:0020147) and by division gives rise to two cells, one of which remains in the meristem, while the other is produces different root cells. NMDCO_relaxed.owl PO:0004011 biolink:NamedThing initial cell A meristematic cell (PO:0004010) that by division gives rise to two cells, one of which remains meristematic, while the other is added to the plant body. NMDCO_relaxed.owl PO:0000295 biolink:NamedThing cambial initial cell An initial cell (PO:0004011) that is part of the vascular cambium (PO:0005598) or cork cambium (PO:0005599), and by periclinal divisions, produces cells to the outside or inside of the cambial axis. NMDCO_relaxed.owl PO:0000349 biolink:NamedThing plant epidermal initial cell An initial cell (PO:0004011) that is part of an plant epidermis (PO:0005679) and gives rise to specialized cells. NMDCO_relaxed.owl PO:0025510 biolink:NamedThing archegonium initial cell An initial cell (PO:0004011) that divides asymmetrically to form an archegonium central cell (PO:0025509) and a smaller archegonium neck canal cell (PO:0030035). NMDCO_relaxed.owl PO:0025625 biolink:NamedThing cortex-endodermis initial cell An initial cell (PO:0004011) that produces cortex (PO:0005708) and endodermis (PO:0000252). NMDCO_relaxed.owl PO:0030086 biolink:NamedThing protonema sub-apical initial cell An initial cell that is produced by longitudinal division of a sub-apical cell of a protonema. NMDCO_relaxed.owl PO:0030087 biolink:NamedThing non-vascular leaf initial cell An initial cell (PO:0004011) that is part of a gametophore (PO:0030018) and gives rise to a non-vascular leaf (PO:0025075). NMDCO_relaxed.owl PO:0000060 biolink:NamedThing root cortex-endodermis initial cell A root initial cell (PO:0000059) that produces root cortex (PO:0000258) and root endodermis (PO:0005059). In direct contact with quiescent center (PO:0020149). NMDCO_relaxed.owl PO:0000061 biolink:NamedThing lateral root cap epidermal initial cell A root initial cell (PO:0000059) that produces lateral root cap cells and root epidermis (PO:0006036). NMDCO_relaxed.owl PO:0020133 biolink:NamedThing columella root cap initial cell A root initial cell (PO:0000059) that produces columella cells in the root cap (PO:0020123). In direct contact with quiescent center (PO:0020149). NMDCO_relaxed.owl PO:0000062 biolink:NamedThing stomatal initial cell An plant epidermal initial cell (PO:0000349) that undergoes several rounds of uneven division, each time giving rise to a larger daughter cell that differentiates into an epidermal ground cell and a smaller daughter cell that remains meristematic, until the meristematic cell (PO:0004010) differentiates into a guard mother cell (PO:0000351). NMDCO_relaxed.owl PO:0030068 biolink:NamedThing epidermal rhizoid initial cell A plant epidermal initial cell (PO:0000349) that gives rise to an epidermal rhizoid (PO:0030071). NMDCO_relaxed.owl PO:0000063 biolink:NamedThing leaf procambial cell A procambial cell (PO:0025258) that is part of a leaf procambium (PO:0025259). NMDCO_relaxed.owl PO:0025258 biolink:NamedThing procambial cell A meristematic cell (PO:0004010) that is part of a portion of procambium (PO:0025275). NMDCO_relaxed.owl PO:0000064 biolink:NamedThing xylem pole pericycle cell A pericycle cell that is adjacent to the protoxylem of a vascular bundle. NMDCO_relaxed.owl PO:0025261 biolink:NamedThing pericycle cell A ground tissue cell that is part of a portion of pericycle. NMDCO_relaxed.owl PO:0000065 biolink:NamedThing phloem pole pericycle cell A pericycle cell that is adjacent to the protophloem of a vascular bundle. NMDCO_relaxed.owl PO:0000066 biolink:NamedThing epithem cell A parenchyma cell of the mesophyll of a hydathode found between the xylem endings and the epidermis. NMDCO_relaxed.owl PO:0000074 biolink:NamedThing parenchyma cell A relatively unspecialized ground tissue cell with a nucleate protoplast. NMDCO_relaxed.owl PO:0000071 biolink:NamedThing companion cell A parenchyma cell (PO:0000074) that is adjacent to a sieve tube element (PO:0000289) and arises from the same phloem mother cell (PO:0000400) as the sieve tube element. NMDCO_relaxed.owl PO:0000076 biolink:NamedThing chlorenchyma cell A parenchyma cell containing chloroplasts; a component of leaf mesophyll and other green parenchyma tissue. NMDCO_relaxed.owl PO:0004525 biolink:NamedThing secondary xylem parenchyma cell A parenchyma cell (PO:0000074) that is part of a portion of secondary xylem parenchyma (PO:0004532). NMDCO_relaxed.owl PO:0025285 biolink:NamedThing callus parenchyma cell A parenchyma cell that is part of a plant callus. NMDCO_relaxed.owl PO:0025412 biolink:NamedThing albuminous cell A parenchyma cell (PO:0000074) that is morphologically and physiologically associated with a sieve cell (PO:0025415) but does is not derived from the same initial cell (PO:0004011) as the sieve cell. NMDCO_relaxed.owl PO:0025030 biolink:NamedThing ground tissue cell A native plant cell (PO:0025606) that is part of a portion of ground tissue (PO:0025059). NMDCO_relaxed.owl PO:0000075 biolink:NamedThing collenchyma cell An elongated plant cell with unevenly thickened non-lignified primary walls that is alive at maturity. NMDCO_relaxed.owl PO:0000077 biolink:NamedThing sclerenchyma cell A ground tissue cell (PO:0025030) with a lignified secondary cell wall. NMDCO_relaxed.owl PO:0000078 biolink:NamedThing transfer cell A cell with wall ingrowths (or invaginations) that increase the surface of the plasmalemma. NMDCO_relaxed.owl PO:0000352 biolink:NamedThing myrosin cell A cell containing glucosinolates ("mustard oil glucosides") and myrosinases, enzymes hydrolyzing the glucosinolates. NMDCO_relaxed.owl PO:0000353 biolink:NamedThing passage cell A ground tissue cell that is part of an exodermis or an endodermis and remains thin walled when the associated cells develop thick secondary walls. NMDCO_relaxed.owl PO:0005026 biolink:NamedThing root giant cell Multinucleate cell developed by a series of events involving kayokinesis but not cytokinesis of the initial feeding cell. The events are induced by root knot nematodes (e.g., Meloidogyne sp. ) entering the feeding cells (any cells) of the root vascular system. NMDCO_relaxed.owl PO:0005027 biolink:NamedThing root syncytium cell Multinucleate cell developed by a series of events involving fusion with the neighboring dividing cells. The events are induced by cyst nematodes (e.g. Heterodera schachtii) entering the feeding cells (any cells) of the root vascular system. NMDCO_relaxed.owl PO:0020132 biolink:NamedThing columella root cap cell Cell that constitutes the central part of the root cap, arranged in longitudinal files. NMDCO_relaxed.owl PO:0025031 biolink:NamedThing laticifer cell A ground tissue cell (PO:0025030) that contains latex. NMDCO_relaxed.owl PO:0025541 biolink:NamedThing bundle sheath cell A ground tissue cell (PO:0000076) that is part of a bundle sheath (PO:0006023). NMDCO_relaxed.owl PO:0025624 biolink:NamedThing endodermis cell A ground tissue cell (PO:0025030) that is part of a portion of endodermis (PO:0000252). NMDCO_relaxed.owl PO:0030045 biolink:NamedThing stereid A ground tissue cell with thickened cell walls. NMDCO_relaxed.owl PO:0000079 biolink:NamedThing fusiform initial cell An elongated cambial initial cell (PO:0000295) with approximately wedge-shaped ends that is part of the vascular cambium (PO:0005598) and gives rise to axial cells. NMDCO_relaxed.owl PO:0000082 biolink:NamedThing ray initial cell A cambial initial cell (PO:0000295) that gives rise to ray cells of the secondary xylem (PO:0005848) and secondary phloem (PO:0005043). NMDCO_relaxed.owl PO:0000400 biolink:NamedThing phloem mother cell A cambial initial cell (PO:0000295) which is destined to differentiate into secondary phloem. NMDCO_relaxed.owl PO:0000084 biolink:NamedThing plant sperm cell A gamete (PO:0025006) produced by an antheridium (PO:0025125) or a microgametophyte (PO:0025280). NMDCO_relaxed.owl PO:0025006 biolink:NamedThing plant gamete A native plant cell (PO:0025606) that has half the chromosome complement of the sporophyte and is capable of fertilization to create a plant zygote (PO:0000423). NMDCO_relaxed.owl PO:0020094 biolink:NamedThing plant egg cell A gamete (PO:0025006) produced by an archegonium (PO:0025126) or an embryo sac (PO:0025074). NMDCO_relaxed.owl PO:0000112 biolink:NamedThing shoot axis epidermis A portion of shoot system epidermis (PO:0006035) that is part of a shoot axis (PO:0025029). NMDCO_relaxed.owl PO:0006035 biolink:NamedThing shoot system epidermis A portion of epidermis (PO:0005679) that is part of a shoot system (PO:0009006) and arises from the meristem L1 layer (PO:0009020).|A portion of plant epidermis (PO:0005679) that is part of a shoot system (PO:0009006) and arises from the meristem L1 layer (PO:0009020). NMDCO_relaxed.owl PO:0000207 biolink:NamedThing nectary epidermis A portion of shoot system epidermis (PO:0006035) that is part of a nectary (PO:0009035) . NMDCO_relaxed.owl PO:0002000 biolink:NamedThing stomatal complex A portion of shoot system epidermis (PO:0006035) that has as parts two guard cells (PO:0000293) and a stomatal pore (PO:0008032). May also contain subsidiary cells (PO:0000284). NMDCO_relaxed.owl PO:0006049 biolink:NamedThing scutellum epidermis A portion of shoot system epidermis (PO:0006035) that is part of the scutellum (PO:0020110). NMDCO_relaxed.owl PO:0025157 biolink:NamedThing phyllome epidermis A portion of shoot system epidermis (PO:0006035) that is part of a phyllome (PO:0006001). NMDCO_relaxed.owl PO:0000115 biolink:NamedThing socket cell A shoot epidermal cell (PO:0025165) that surrounds a trichome (PO:0000282) and provides its support. NMDCO_relaxed.owl PO:0025165 biolink:NamedThing shoot epidermal cell A plant epidermal cell (PO:0004013) that is part of a shoot axis epidermis (PO:0000112). NMDCO_relaxed.owl PO:0000284 biolink:NamedThing subsidiary cell A shoot epidermal cell (PO:0025165) associated with a stomatal pore (PO:0008032) and at least morphologically distinguishable from the other epidermal cells. NMDCO_relaxed.owl PO:0000293 biolink:NamedThing guard cell A shoot epidermal cell (PO:0025165) that is one of a pair of cells flanking the stomatal pore (PO:0008032). NMDCO_relaxed.owl PO:0000332 biolink:NamedThing shoot epidermal pavement cell A shoot epidermal cell (PO:0025165) that is relatively unspecialized at maturity. NMDCO_relaxed.owl PO:0000351 biolink:NamedThing guard mother cell A shoot epidermal cell (PO:0025165) that divides to produce the guard cells (PO:0000293). NMDCO_relaxed.owl PO:0000198 biolink:NamedThing free nuclear endosperm A portion of endosperm (PO:0009089) tissue in which at least the first karyokinesis is not followed by cytokinesis. NMDCO_relaxed.owl PO:0000199 biolink:NamedThing cellular endosperm A portion of endosperm (PO:0009089) in which the first karyokinesis event is accompanied by cytokinesis. NMDCO_relaxed.owl PO:0006017 biolink:NamedThing helobial endosperm A portion of endosperm (PO:0009089) tissue in which the first karyokinetic event is accompanied by the formation of a horizontal wall which divides the embryo sac central cell (PO:0020090) into unequal regions. The larger one is the micropylar chamber in which cytokinesis does not occur and the smaller one is the chalazal chamber. NMDCO_relaxed.owl PO:0000224 biolink:NamedThing central zone An area of densely packed cells in the shoot apex that divide infrequently. NMDCO_relaxed.owl PO:0000225 biolink:NamedThing peripheral zone A portion of meristem tissue (PO:0009013) which is the organogenic region of the meristem, characterized by higher rates of cell division. NMDCO_relaxed.owl PO:0000226 biolink:NamedThing rib zone The region of the shoot apical meristem that lies below the central zone and is flanked by the peripheral zone. NMDCO_relaxed.owl PO:0000230 biolink:NamedThing inflorescence meristem A meristem that gives rise to an inflorescence. NMDCO_relaxed.owl PO:0006012 biolink:NamedThing leaf collar A thin band of intercalary meristematic tissue at the junction of a leaf blade (lamina) and a leaf sheath found in grasses. NMDCO_relaxed.owl PO:0006079 biolink:NamedThing shoot system meristem A portion of meristem tissue (PO:0009013) that is part of a shoot system (PO:0009006). NMDCO_relaxed.owl PO:0006085 biolink:NamedThing root meristem A portion of meristem tissue (PO:0009013) that gives rise to a root (PO:0009005). NMDCO_relaxed.owl PO:0006210 biolink:NamedThing protoderm A portion of meristem tissue (PO:0009013) that is the outer layer of an apical meristem (PO:0020144), or the outer layer of a plant embryo proper (PO:0000001), and gives rise to a portion of epidermis (PO:0005679). NMDCO_relaxed.owl PO:0008035 biolink:NamedThing plerome A meristem forming the core of the axis composed of the primary vascular tissues and associated ground tissue, such as pith and interfascicular regions. NMDCO_relaxed.owl PO:0008036 biolink:NamedThing periblem A portion of meristem tissue that forms the cortex. NMDCO_relaxed.owl PO:0009020 biolink:NamedThing meristem L1 layer A portion of meristem tissue (PO:0009013) that is the outermost layer of a shoot apical meristem (PO:0020148) and gives rise to a shoot system epidermis (PO:0006035). NMDCO_relaxed.owl PO:0009021 biolink:NamedThing meristem L2 layer A portion of meristem tissue (PO:0009013) directly beneath a meristem L1 layer (PO:0009020) in a shoot apical meristem (PO:0020148) which gives rise to ground tissue (PO:0025059). NMDCO_relaxed.owl PO:0009022 biolink:NamedThing meristem L3 layer A portion of meristem tissue (PO:0009013) beneath a meristem L2 layer (PO:0009021) in a shoot apical meristem (PO:0020148) which gives rise to internal tissues of leaf and stem. NMDCO_relaxed.owl PO:0020144 biolink:NamedThing apical meristem A maximal portion of meristem tissue (PO:0009013) located at a shoot apex (PO:0000037) or root tip (PO:0000025). NMDCO_relaxed.owl PO:0020145 biolink:NamedThing lateral meristem A portion of meristem (PO:0009013) tissue located parallel to the sides of a shoot axis (PO:0025029) or root (PO:0009005) that participates in lateral growth. NMDCO_relaxed.owl PO:0020149 biolink:NamedThing quiescent center A portion of meristem tissue (PO:0009013) that is part of a root apical meristem (PO:0020147) and consists of mitotically and metabolically inactive cells and is located behind the protoderm (PO:0006210) of the root (PO:0009005). NMDCO_relaxed.owl PO:0025127 biolink:NamedThing primordium A portion of meristem tissue (PO:0009013) that has as parts protoderm (PO:0006210) and sub-epidermal meristematic tissue and is committed to the development of a particular plant structure (PO:0009011). NMDCO_relaxed.owl PO:0025275 biolink:NamedThing procambium A portion of meristem tissue (PO:0009013) that undergoes differentiation to form the primary vascular tissue (PO:0025408). NMDCO_relaxed.owl PO:0025400 biolink:NamedThing phyllome adaxial meristem A portion of meristem tissue (PO:0009013) that is found on the adaxial side of a developing phyllome (PO:0006001). NMDCO_relaxed.owl PO:0025402 biolink:NamedThing phyllome abaxial meristem A portion of meristem tissue (PO:0009013) that is found on the abaxial side of a developing phyllome (PO:0006001). NMDCO_relaxed.owl PO:0025404 biolink:NamedThing phyllome marginal meristem A portion of meristem (PO:0009013) tissue that is part of a phyllome margin (PO:0025018) of an expanding phyllome (PO:0006001) and has as parts marginal and submarginal initials. NMDCO_relaxed.owl PO:0025428 biolink:NamedThing phyllome plate meristem A portion of meristem (PO:0009013) tissue in which the planes of cell division in each layer are anticlinal to the surface of the phyllome (PO:0006001). NMDCO_relaxed.owl PO:0025430 biolink:NamedThing phyllome anlagen A portion of meristem tissue (PO:0009013) that is part of a peripheral zone (PO:0000225) of a shoot apical meristem (PO:0020148) and will give rise to a phyllome primordium (PO:0025128). NMDCO_relaxed.owl PO:0025433 biolink:NamedThing root anlagen A portion of meristem tissue (PO:0009013) that is committed to the development of a root primordium (PO:0005029). NMDCO_relaxed.owl PO:0025594 biolink:NamedThing ground meristem A portion of meristem tissue (PO:0009013) that gives rise to a portion of ground tissue (PO:0025059). NMDCO_relaxed.owl PO:0000229 biolink:NamedThing flower meristem A portion of reproductive shoot apical meristem tissue (PO:0008028) that gives rise to the floral organs (PO:0025395). NMDCO_relaxed.owl PO:0008028 biolink:NamedThing reproductive shoot apical meristem A shoot apical meristem (PO:0020148) that gives rise to the apical growth of reproductive tissues and organs. NMDCO_relaxed.owl PO:0009108 biolink:NamedThing inflorescence apical meristem A reproductive shoot apical meristem that gives rise to the apical growth of the inflorescence. It develops from the shoot apical meristem (SAM) after it undergoes transition from vegetative to reproductive phase. NMDCO_relaxed.owl PO:0000232 biolink:NamedThing axillary bud meristem A shoot system meristem (PO:0006079) formed in an axil (PO:0025224). NMDCO_relaxed.owl PO:0006073 biolink:NamedThing intercalary meristem A shoot system meristem (PO:0006079) that is intercalated between two portions of non-meristematic tissue and results in an increase in length as part of primary growth. NMDCO_relaxed.owl PO:0020148 biolink:NamedThing shoot apical meristem A shoot system meristem (PO:0006079) formed at the apex of the shoot axis (PO:0025029), including those originating from an axillary bud meristem (PO:0000232). NMDCO_relaxed.owl PO:0000244 biolink:NamedThing functional megaspore A megaspore(s) that forms an embryo sac. NMDCO_relaxed.owl PO:0020019 biolink:NamedThing megaspore The larger, in general, of the two kinds of spores produced after meiosis in the life cycle of a heterosporous plant, and on germination giving rise to the female gametophyte (embryo sac). NMDCO_relaxed.owl PO:0000245 biolink:NamedThing degenerate megaspore In monosporic and bisporic megasporogenesis: the megaspore(s) that would not participate in megagametogenesis. NMDCO_relaxed.owl PO:0000252 biolink:NamedThing endodermis A portion of ground tissue (PO:0025059) that is the inner most layer of a cortex (PO:0005708) and has a casparian strip in its anticlinal cell walls. NMDCO_relaxed.owl PO:0004003 biolink:NamedThing phellem A portion of ground tissue (PO:0025059) centrifugally derived from cork cambium (PO:0005599), non-living at maturity, and having suberized walls. NMDCO_relaxed.owl PO:0004700 biolink:NamedThing anther wall middle layer A portion of ground tissue (PO:0025059) directly internal to an anther wall endothecium (PO:0020002) that develops from an anther wall secondary parietal cell layer (PO:0006007). NMDCO_relaxed.owl PO:0005050 biolink:NamedThing phelloderm A portion of ground tissue (PO:0025059) often resembling cortical parenchyma produced centripetally by the cork cambium. NMDCO_relaxed.owl PO:0005051 biolink:NamedThing hypodermis A portion of ground tissue (PO:0025059) that is the outermost layer of a portion of cortex (PO:0005708). NMDCO_relaxed.owl PO:0005421 biolink:NamedThing parenchyma A portion of ground tissue (PO:0025059) composed of polyhedral cells typically with thin, non-lignified cellulosic cell walls and nucleate, living protoplasts. NMDCO_relaxed.owl PO:0005423 biolink:NamedThing collenchyma A portion of ground tissue (PO:0025059) which comprises living tissue composed of more or less elongated cells with thick, non-lignified primary cell walls. NMDCO_relaxed.owl PO:0005427 biolink:NamedThing sclerenchyma A portion of ground tissue (PO:0025059) which comprises supporting tissue composed of plant fiber cells (PO:0025407) or sclereid cells (PO:0025418). NMDCO_relaxed.owl PO:0006006 biolink:NamedThing anther wall primary parietal cell layer A portion of ground tissue (PO:0025059) that is part of an anther wall (PO:0000002) and has as parts a primary parietal cell (PO:0006010) and adjacent plant cells. NMDCO_relaxed.owl PO:0006007 biolink:NamedThing anther wall secondary parietal cell layer A portion of ground tissue (PO:0025059) that is part of an anther wall (PO:0000002) and develops from an anther wall primary parietal cell layer (PO:0006006). NMDCO_relaxed.owl PO:0006022 biolink:NamedThing bundle sheath extension A portion of ground tissue (PO:0025059) which forms a strip along the leaf veins and extending from the bundle sheath (PO:0006023) to the epidermis. It may be present on one or both sides of the vein and may consist of parenchyma or sclerenchyma. NMDCO_relaxed.owl PO:0006023 biolink:NamedThing bundle sheath A portion of ground tissue (PO:0025059) which comprises a layer or layers of cells surrounding the vascular bundles (PO:0005020) of leaves. It may consist of parenchyma (PO:0005421) or sclerenchyma (PO:0005427). NMDCO_relaxed.owl PO:0006202 biolink:NamedThing interfascicular region A portion of ground tissue (PO:0025059) located between vascular bundles in a shoot axis. NMDCO_relaxed.owl PO:0006203 biolink:NamedThing pericycle A portion of ground tissue (PO:0025059) that is part of a root stele located between the phloem and endodermis. NMDCO_relaxed.owl PO:0020102 biolink:NamedThing portion of transmitting tissue A portion of ground tissue (PO:0025059) in the style of a carpel through which a pollen tube grows; it connects a stigma and the inside of an ovary. NMDCO_relaxed.owl PO:0025313 biolink:NamedThing tapetum A portion of ground tissue (PO:0025059) that is the inner-most layer of a sporangium wall (PO:0025306). NMDCO_relaxed.owl PO:0030049 biolink:NamedThing sporangium wall endothecium A portion of ground tissue (PO:0025059) that is the sub-epidermal layer of a sporangium wall (PO:0025306). NMDCO_relaxed.owl PO:0030050 biolink:NamedThing stereome A portion of ground tissue (PO:0025059) that has as parts stereid cells (PO:0030045) and no other cell types. NMDCO_relaxed.owl PO:0030085 biolink:NamedThing protosporangium endothecium A portion of ground tissue (PO:0025059) that is the tissue internal to an amphithecium early in sporangium development. NMDCO_relaxed.owl PO:0000256 biolink:NamedThing root hair cell A root epidermal cell (PO:0025164) that develops from a trichoblast (PO:0000262) and has as part a root hair (GO:0035618). NMDCO_relaxed.owl PO:0025164 biolink:NamedThing root epidermal cell A plant epidermal cell (PO:0004013) that is part of a root epidermis (PO:0006036). NMDCO_relaxed.owl PO:0000262 biolink:NamedThing trichoblast A root epidermal cell (PO:0025164) that is the smaller cell produced by the asymmetric division of an epidermal intial cell (PO:0000349) and gives rise to a root hair (GO:0035618). NMDCO_relaxed.owl PO:0000263 biolink:NamedThing non-hair root epidermal cell A root epidermal cell (PO:0025164) that develops from an epidermal initial (PO:0000349) and does not have as part a root hair (GO:0035618). NMDCO_relaxed.owl PO:0000272 biolink:NamedThing protoxylem A portion of primary xylem (PO:0000272) tissue that has as part one or more protoxylem tracheary elements (PO:0025575) embedded in parenchyma (PO:0005421) tissue. NMDCO_relaxed.owl PO:0005849 biolink:NamedThing primary xylem A portion of xylem (PO:0005352) tissue that develops from the procambium (PO:0025275). NMDCO_relaxed.owl PO:0000372 biolink:NamedThing metaxylem A portion of primary xylem (PO:0005849) tissue that has as part one or more metaxylem tracheary elements (PO:0025576) embedded in parenchyma (PO:0005421) tissue and may contain xylem fiber cells (PO:0000274). NMDCO_relaxed.owl PO:0000274 biolink:NamedThing xylem fiber cell A fiber cell (PO:0025407) that is part of a portion of xylem (PO:0005352) tissue. NMDCO_relaxed.owl PO:0025407 biolink:NamedThing plant fiber cell A sclerenchyma cell (PO:0000077) that is elongated and tapering. NMDCO_relaxed.owl PO:0004519 biolink:NamedThing phloem fiber cell A fiber cell (PO:0025407) that is part of a portion of phloem (PO:0005417) tissue. NMDCO_relaxed.owl PO:0004521 biolink:NamedThing septate fiber cell A plant fiber cell (PO:0025407) with thin transverse walls (septa), which are formed when mitosis occurs within the cell after development of a secondary cell wall (GO:0009531). NMDCO_relaxed.owl PO:0000283 biolink:NamedThing idioblast A native plant cell (PO:0025606) that markedly differs in form, size, or contents from other cells in the same tissue. NMDCO_relaxed.owl PO:0000290 biolink:NamedThing tracheary element A native plant cell (PO:0025606) that has a lignified cell wall with secondary thickening and bordered pits. NMDCO_relaxed.owl PO:0000423 biolink:NamedThing plant zygote A native plant cell (PO:0025606) which is a whole plant (PO:0000003) in the plant zygote stage (PO:0001097). NMDCO_relaxed.owl PO:0004010 biolink:NamedThing meristematic cell A native plant cell (PO:0025606) synthesizing protoplasm and producing new cells by division and with only a primary cell wall. NMDCO_relaxed.owl PO:0004013 biolink:NamedThing plant epidermal cell A native plant cell (PO:0025606) that is part of a portion of epidermis (PO:0005679). NMDCO_relaxed.owl PO:0006010 biolink:NamedThing primary parietal cell A native plant cell (PO:0025606) which is formed by the division of a male archesporial cell (PO:0006014), and is part of the anther wall primary parietal cell layer (PO:0006006). NMDCO_relaxed.owl PO:0006088 biolink:NamedThing primary sporogenous cell A native plant cell (PO:0025606) is formed by the division of the male archesporial initial. After several mitotic divisions these cells differentiate into pollen mother cells. NMDCO_relaxed.owl PO:0006204 biolink:NamedThing sporocyte A native plant cell (PO:0025606) which is diploid (2n), and undergoes meiosis (GO:0007126) to produce four haploid (1n) plant spores (PO:0025017). NMDCO_relaxed.owl PO:0008030 biolink:NamedThing trichome cell A plant cell (PO:0009002) that is part of a multicellular trichome (PO:0000282). NMDCO_relaxed.owl PO:0020099 biolink:NamedThing microgametophyte vegetative cell A native plant cell (PO:0025606) that is the larger cell of a microgametophyte (PO:0025280) in seed plants. It does not divide further and develops into a pollen tube cell (PO:0025195). NMDCO_relaxed.owl PO:0025032 biolink:NamedThing hydroid A native plant cell (PO:0025606) that is dead at maturity, lacks specialized wall thickenings or lignin, and has tapered ends that are thin and partially hydrolyzed. NMDCO_relaxed.owl PO:0025033 biolink:NamedThing leptoid A native plant cell (PO:0025606) that resembles in structure the sieve elements (PO:0025406) of vascular plants. NMDCO_relaxed.owl PO:0025195 biolink:NamedThing pollen tube cell A native plant cell (PO:0025606) that develops from a microgametophyte vegetative cell (PO:0020099) and forms a tubular extension of the pollen (PO:0025281). NMDCO_relaxed.owl PO:0025406 biolink:NamedThing sieve element A native plant cell (PO:0025606) that is part of a portion of phloem tissue (PO:0005417), has sieve areas in its walls, and lacks a nucleus in its mature protoplast. NMDCO_relaxed.owl PO:0025509 biolink:NamedThing archegonium central cell A native plant cell (PO:0025606) that is the larger, distal cell arising from the first division of an archegonium initial cell (PO:0025510). NMDCO_relaxed.owl PO:0025521 biolink:NamedThing unicellular plant gametangium A native plant cell (PO:0025606) that produces one or more gametes (PO:0025006) and participates in the gametophyte development stage (PO:0028003). NMDCO_relaxed.owl PO:0025524 biolink:NamedThing ventral canal cell A native plant cell (PO:0025606) that develops from the archegonium central cell (PO:0025509), and lies at the base of the archegonium neck (PO:0030039), above the archegonium egg cell (PO:0025122) in the venter (PO:0030038). NMDCO_relaxed.owl PO:0025525 biolink:NamedThing spermatogenous cell A native plant cell (PO:0025606) that gives rise to one or more plant sperm cells (PO:0000084). NMDCO_relaxed.owl PO:0025533 biolink:NamedThing prothallial cell A native plant cell (PO:0025606) which is vegetative and develops from the division of the microspore (PO:0020048) of vascular plants other than angiosperms. NMDCO_relaxed.owl PO:0025537 biolink:NamedThing unicellular trichome A trichome (PO:0000282) that is a single plant cell (PO:0009002). NMDCO_relaxed.owl PO:0025543 biolink:NamedThing tapetum cell A native plant cell (PO:0025606) that is part of the tapetum (PO:0025313). NMDCO_relaxed.owl PO:0025586 biolink:NamedThing phyllome founder cell A native plant cell (PO:0025606) that is part of the phyllome anlagen (PO:0025430). NMDCO_relaxed.owl PO:0030052 biolink:NamedThing antheridium jacket layer cell A native plant cell (PO:0025606) that is part of an antheridium jacket layer (PO:0030053). NMDCO_relaxed.owl PO:0030056 biolink:NamedThing archesporial cell A native plant cell (PO:0025606) that divides to gives rise to a sporocyte (PO:0006204) and is part of a sporangium (PO:0025094). NMDCO_relaxed.owl PO:0030057 biolink:NamedThing alar cell A native plant cell (PO:0025606) located at the base of a non-vascular leaf (PO:0025075) adjacent to where the leaf attaches to the stem (PO:0009047). NMDCO_relaxed.owl PO:0030058 biolink:NamedThing brachycyte A native plant cell (PO:0025606) that develops from a cell in a protonema (PO:0030003) and has a thick cell wall. NMDCO_relaxed.owl PO:0030059 biolink:NamedThing tmema cell A native plant cell (PO:0025606) at the base of a gemma (PO:0025614) or adjacent to a brachycyte (PO:0030058) that breaks down to allow abscission of the gemma or brachycyte. NMDCO_relaxed.owl PO:0030065 biolink:NamedThing archegonium neck canal cell A native plant cell (PO:0025606) that is one of the axial row of cells in an immature archegonium neck (PO:0030039). NMDCO_relaxed.owl PO:0000289 biolink:NamedThing sieve tube element A sieve element (PO:0025406) that is part of a sieve tube (PO:0025416) and has as parts sieve areas aggregated into sieve plates (GO:0097218). NMDCO_relaxed.owl PO:0025415 biolink:NamedThing sieve cell A sieve element (PO:0025406) in which the sieve areas are not aggregated into sieve plates (GO:0097218). NMDCO_relaxed.owl PO:0025452 biolink:NamedThing primary phloem sieve element A sieve element (PO:0025406) that is part of a portion of primary phloem (PO:0006075). NMDCO_relaxed.owl PO:0025453 biolink:NamedThing secondary phloem sieve element A sieve element (PO:0025406) that is part of a portion of secondary phloem (PO:0005043). NMDCO_relaxed.owl PO:0000301 biolink:NamedThing tracheid A tracheary element (PO:0000290) that has no perforations in its cell wall. NMDCO_relaxed.owl PO:0002003 biolink:NamedThing xylem vessel member A tracheary element (PO:0000290) that is part of a xylem vessel (PO:0025417) and has as parts perforation plates. NMDCO_relaxed.owl PO:0025444 biolink:NamedThing primary xylem tracheary element A tracheary element (PO:0000290) that is part of a primary xylem tissue (PO:0005849). NMDCO_relaxed.owl PO:0025445 biolink:NamedThing secondary xylem tracheary element A tracheary element (PO:0000290) that is part of a portion of secondary xylem tissue (PO:0005848). NMDCO_relaxed.owl PO:0000309 biolink:NamedThing nectary parenchyma A portion of parenchyma tissue (PO:0005421) that is part of a nectary (PO:0009035). NMDCO_relaxed.owl PO:0009035 biolink:NamedThing nectary A portion of secretory tissue (PO:0005656) which is a multicellular glandular structure secreting a liquid containing organic substances, including sugars. NMDCO_relaxed.owl PO:0009056 biolink:NamedThing flower nectary A nectary (PO:0009035) occurring on a floral organ (PO:0025395) or other part of a flower (PO:0009046). NMDCO_relaxed.owl PO:0009057 biolink:NamedThing extrafloral nectary A nectary (PO:0009035), not occurring on a floral organ (PO:0025395) or other part of a flower (PO:0009046). NMDCO_relaxed.owl PO:0000355 biolink:NamedThing fiber tracheid A xylem fiber cell (PO:0000274) with bordered pits with pit cavities. NMDCO_relaxed.owl PO:0004520 biolink:NamedThing libriform fiber cell A xylem fiber cell (PO:0000274) with simple pits. NMDCO_relaxed.owl PO:0025422 biolink:NamedThing gelatinous fiber cell A xylem fiber cell (PO:0000274) in which the inner-most layer of the secondary cell wall (GO:0009531) contains abundant cellulose and is poor in lignin. NMDCO_relaxed.owl PO:0000431 biolink:NamedThing megasporocyte A sporocyte (PO:0006204) that produces four haploid (1n) megaspores (PO:0020019). NMDCO_relaxed.owl PO:0020047 biolink:NamedThing microsporocyte A sporocyte (PO:0006204) that produces four haploid (1n) microspores (PO:0020048). NMDCO_relaxed.owl PO:0001002 biolink:NamedThing fruit development stage A multi-tissue plant structure development stage (PO:0025571) that has as primary participant a single fruit (PO:0009001). NMDCO_relaxed.owl PO:0025571 biolink:NamedThing multi-tissue plant structure development stage A plant structure development stage (PO:0009012) that has as primary participant a multi-tissue plant structure (PO:0025496). NMDCO_relaxed.owl PO:0001170 biolink:NamedThing seed development stage A multi-tissue plant structure development stage (PO:0025571) that has as primary participant a seed (PO:0009010). NMDCO_relaxed.owl PO:0025339 biolink:NamedThing plant organ development stage A multi-tissue plant structure development stage (PO:0025571) that has as primary participant a plant organ (PO:0009008) . NMDCO_relaxed.owl PO:0001003 biolink:NamedThing vascular leaf anlagen formation stage A vascular leaf initiation stage (PO:0007040) during which the vascular leaf founder cells (PO:0025592) of the shoot apical meristem (PO:0020148) form a vascular leaf anlagen (PO:0025431). NMDCO_relaxed.owl PO:0001051 biolink:NamedThing vascular leaf initiation stage A vascular leaf development stage (PO:0025570) which begins with the onset of the vascular leaf anlagen formation stage (PO:0001003) and ends with the termination of the vascular leaf primordium polarity determination stage (PO:0001052). NMDCO_relaxed.owl PO:0001019 biolink:NamedThing vascular leaf primordium formation stage A vascular leaf initiation stage (PO:0001051) during which a vascular leaf primordium (PO:0000017) forms in the peripheral zone (PO:0000225) of the vegetative shoot apical meristem (PO:0020148). NMDCO_relaxed.owl PO:0025572 biolink:NamedThing vascular leaf primordium polarity determination stage A vascular leaf initiation stage (PO:0001051) during which the vascular leaf primordium (PO:0004725) develops an adaxial side (PO:0004726) and an abaxial side (PO:0004725). NMDCO_relaxed.owl PO:0001004 biolink:NamedThing anther development stage Stages of development of the anther defined by characteristic morphological, cytological, histological or other visible features. NMDCO_relaxed.owl PO:0007605 biolink:NamedThing androecium development stage A collective phyllome structure development stage (PO:0025578) that has as a primary participant an androecium (PO:0009061). NMDCO_relaxed.owl PO:0007613 biolink:NamedThing stamen primordium visible stage Stage of androecium development that begins when the stamens or petal-stamen primordia arise. NMDCO_relaxed.owl PO:0001005 biolink:NamedThing A archesporial cells visible stage An initial stage during which archesporial cells arise in four corners of L2 layer. Change in shape of primordia to more oval. NMDCO_relaxed.owl PO:0001018 biolink:NamedThing B formation of primary parietal and sporogenous cells stage Stage during which the primary parietal and primary sporogenous layers are derived from archesporial cells. NMDCO_relaxed.owl PO:0001025 biolink:NamedThing C four anther lobes formed stage Stage during which the four-lobed anther pattern with two developing stomium regions (notch) are formed. NMDCO_relaxed.owl PO:0001026 biolink:NamedThing D locules established stage Stage during which the four clearly defined locules are established. All anther cell types present and microspore mother cells appear. NMDCO_relaxed.owl PO:0001032 biolink:NamedThing E anther wall tapetum degeneration initiated stage An anther development stage (PO:0001004) during which degeneration of the anther wall tapetum (PO:0009071) is initiated, as the deposition on the surface of the microspore (PO:0020048) primexine proceeds. NMDCO_relaxed.owl PO:0001034 biolink:NamedThing F bilocular anther stage Stage during which anther becomes bilocular, after degeneration and breakage of septum below stomium. NMDCO_relaxed.owl PO:0001035 biolink:NamedThing G anther dehiscence stage Stage during which the dehiscence of anthers occurs. Anther breaks along stomium and pollen is released. NMDCO_relaxed.owl PO:0001036 biolink:NamedThing H anther senescence stage Stage during which the senescence of anther and stamen occurs. Shrinkage of cells and anther structure takes place. NMDCO_relaxed.owl PO:0001006 biolink:NamedThing B enlarged microsporocyte stage Stage during which the microsporocytes become conspicuous. NMDCO_relaxed.owl PO:0001007 biolink:NamedThing pollen development stage A microgametophyte development stage (PO:0025602) during which the pollen (PO:0025281) develops. NMDCO_relaxed.owl PO:0001008 biolink:NamedThing C callose wall formation in pollen mother cells stage Stage during which diploid pollen mother cells become separated from each other and from tapetum by a callose wall. NMDCO_relaxed.owl PO:0001009 biolink:NamedThing D pollen mother cell meiosis stage Stage during which pollen mother cells undergo meiosis to form tetrads of microspores. NMDCO_relaxed.owl PO:0001010 biolink:NamedThing F microspore release stage Stage of microgametophyte development during which the callose wall between the tetrads breaks down and haploid microspores are released and lie freely in locules. NMDCO_relaxed.owl PO:0001011 biolink:NamedThing A microsporogenous mass stage An initial stage during which the archesporial cells divide to give rise to primary parietal and sporogenous cells. NMDCO_relaxed.owl PO:0001012 biolink:NamedThing G early unicellular microspore stage Stage of microgametophyte development during which the microspores round up and small vacuoles appear in their cytoplasm. The microspore walls thicken due to the formation of the exine. NMDCO_relaxed.owl PO:0001013 biolink:NamedThing H late unicellular microspore stage Stage of microgametophyte development during which a large vacuole is formed in each microspore causing a rapid increase in size and a displacement of the nucleus to one side. NMDCO_relaxed.owl PO:0001014 biolink:NamedThing I first mitotic division stage Stage of microgametophyte development during which the asymmetric, first mitotic division of the microspores occurs producing a large vegetative cell and small generative cell, located near pollen wall. NMDCO_relaxed.owl PO:0001015 biolink:NamedThing K second mitotic division stage A pollen development stage (PO:0001007) during which the generative cell (PO:0020097) undergoes mitotic division to form two male gametes, the pollen sperm cells (PO:0025121). NMDCO_relaxed.owl PO:0001016 biolink:NamedThing L mature pollen stage Stage of microgametophyte development during which the pollen reaches mature stage and desiccates. NMDCO_relaxed.owl PO:0001017 biolink:NamedThing M germinated pollen stage The final stage in the life cycle of the male gametophyte. Upon rehydration, mature pollen grain forms a tubular outgrowth, the pollen tube, which carries the male gametes. NMDCO_relaxed.owl PO:0001029 biolink:NamedThing E tetrad stage Stage immediately following meiosis, during which the tetrads of microspores are still hold together, enclosed by the callose wall. NMDCO_relaxed.owl PO:0001059 biolink:NamedThing J bicellular pollen stage Stage of microgametophyte development during which the small generative cell moves inward, becoming completely surrounded by the cytoplasm of the vegetative cell. NMDCO_relaxed.owl PO:0025602 biolink:NamedThing microgametophyte development stage A gametophyte development stage (PO:0028003) during which a microgametophyte (PO:0025280) develops. NMDCO_relaxed.owl PO:0001020 biolink:NamedThing hood-shaped primordium stage Stage of leaf development when a hood-shaped primordium is formed, partially enclosing P1 and SAM, as in Poaceae. NMDCO_relaxed.owl PO:0001052 biolink:NamedThing vascular leaf expansion stage A vascular leaf development stage (PO:0025570) during which vascular leaf size increases primarily through cell expansion. NMDCO_relaxed.owl PO:0001021 biolink:NamedThing formation of ligule primordium stage A vascular leaf expansion stage (PO:0001052) when conical P3 leaf completely encloses SAM, and the ligule (PO:0020105) primordium is visible. NMDCO_relaxed.owl PO:0001023 biolink:NamedThing rapid elongation of vascular leaf lamina stage A vascular leaf expansion stage (PO:0001052) during which a rapid elongation of the leaf lamina (PO:0020039) occurs. NMDCO_relaxed.owl PO:0001024 biolink:NamedThing rapid elongation of leaf sheath stage A vascular leaf expansion stage (PO:0001052) during which a rapid elongation of the leaf sheath (PO:0020104) occurs. NMDCO_relaxed.owl PO:0004500 biolink:NamedThing formation of vascular leaflet primordia stage A vascular leaf expansion stage (PO:0001052) at which a leaflet primordium (PO:0025481) is initiated on the leaf rachis (PO:0020055) of a compound leaf (PO:0020043). NMDCO_relaxed.owl PO:0001031 biolink:NamedThing 4 root elongation stage The stage at which a root is elongating. NMDCO_relaxed.owl PO:0007520 biolink:NamedThing root development stage Stages of development of a root defined by characteristic morphological, structural, histological or other visible features. NMDCO_relaxed.owl PO:0007015 biolink:NamedThing radicle emergence stage A root development stage (PO:0007520) during which a radicle (PO:0020031) emerges from the seed coat (PO:0009088). NMDCO_relaxed.owl PO:0007505 biolink:NamedThing 1 root primordium formation stage The stage at which root primordium originates and develops at specific locations in embryonic and post embryonic roots. NMDCO_relaxed.owl PO:0007519 biolink:NamedThing 5 root hair formation stage The stage at which the root hairs becomes evident. NMDCO_relaxed.owl PO:0007525 biolink:NamedThing 3 establishment of tissue systems stage The stage at which distinct tissues become organized. NMDCO_relaxed.owl PO:0007527 biolink:NamedThing 2 root meristem formation stage The stage at which the root meristem becomes evident. NMDCO_relaxed.owl PO:0025475 biolink:NamedThing coleorhiza emergence stage A root development stage (PO:0007520) during which a coleorhiza (PO:0020034) emerges from the seed coat (PO:0009088). NMDCO_relaxed.owl PO:0001040 biolink:NamedThing dry seed stage A seed development stage (PO:0001170) during which the mature seed reaches a low moisture content. NMDCO_relaxed.owl PO:0004505 biolink:NamedThing fertilized ovule stage The earliest stage of seed development immediately following double fertilization. NMDCO_relaxed.owl PO:0004506 biolink:NamedThing developing seed stage Stage of seed development characterized by seed growth and differentiation. NMDCO_relaxed.owl PO:0007632 biolink:NamedThing seed maturation stage Stage during which the seed storage products (storage proteins, lipids and starch) are being accumulated, either in the cotyledons or in the endosperm. Also, LEA proteins are accumulated and subsequently, a desiccation tolerant state is reached at the end of this stage. NMDCO_relaxed.owl PO:0007633 biolink:NamedThing endosperm development stage Stages of development of the endosperm. NMDCO_relaxed.owl PO:0025374 biolink:NamedThing seed dormant stage A seed development stage (PO:0001170) during which a seed (PO:0009010) participates in a seed dormancy process (GO:0010162). NMDCO_relaxed.owl PO:0001041 biolink:NamedThing chalazal and micropylar domain establishment stage The initial stage of endosperm development during which the chalazal and micropilar domains are established. NMDCO_relaxed.owl PO:0001042 biolink:NamedThing functional specialization of the endosperm stage Stage of endosperm development during which the functional specialization of the maturing endosperm occurs. NMDCO_relaxed.owl PO:0001096 biolink:NamedThing primary endosperm cell stage One cell stage that takes place following the fertilization, produced by the fusion of sperm cell nucleus and one or more polar nuclei. NMDCO_relaxed.owl PO:0001044 biolink:NamedThing sepal differentiation and expansion stage Stage of calyx development defined by differentiation and expansion of sepal. NMDCO_relaxed.owl PO:0007603 biolink:NamedThing calyx development stage A collective phyllome structure development stage (PO:0025578) that has as a primary participant a calyx (PO:0009060). NMDCO_relaxed.owl PO:0001045 biolink:NamedThing fully expanded sepal stage Stage of calyx development when sepal is fully expanded. NMDCO_relaxed.owl PO:0007607 biolink:NamedThing sepal primordium visible stage Stage of calyx development that begins when the sepal primordia arise. NMDCO_relaxed.owl PO:0001047 biolink:NamedThing lemma development stage A phyllome development stage (PO:0025579) that has as a primary participant a lemma (PO:0009037). NMDCO_relaxed.owl PO:0025579 biolink:NamedThing phyllome development stage A plant organ development stage (PO:0025339) that has a primary participant a phyllome (PO:0025023). NMDCO_relaxed.owl PO:0001048 biolink:NamedThing palea development stage A phyllome development stage (PO:0025579) that has as a primary participant a palea (PO:0009038). NMDCO_relaxed.owl PO:0001049 biolink:NamedThing lodicule development stage A phyllome development stage (PO:0025579) that has as a primary participant a lodicule (PO:0009036). NMDCO_relaxed.owl PO:0001050 biolink:NamedThing leaf development stage A phyllome development stage (PO:0025579) during which the development of vascular leaves (PO:0009025) and non-vascular leaves (PO:0025075) occurs. NMDCO_relaxed.owl PO:0025570 biolink:NamedThing vascular leaf development stage A leaf development stage (PO:0001050) that occurs during the interval between the onset of the vascular leaf initiation stage (PO:0001051) and the termination of the vascular leaf senescent stage (PO:0001054). NMDCO_relaxed.owl PO:0001053 biolink:NamedThing vascular leaf post-expansion stage A vascular leaf development stage (PO:0025570) that begins when the vascular leaf (PO:0009025) is fully expanded and ends with the onset of the vascular leaf senescence stage (PO:0001054). NMDCO_relaxed.owl PO:0001054 biolink:NamedThing vascular leaf senescent stage A vascular leaf development stage (PO:0025570) that begins with the formation of a abscission zone at the base of a vascular leaf (PO:0009025) and ends with leaf separation and death. NMDCO_relaxed.owl PO:0025574 biolink:NamedThing vascular leaf differentiation stage A vascular leaf development stage (PO:0025570) that begins with the formation of procambium (PO:0025275) and protoderm (PO:0006210) and ends with the formation and differentiation of the leaf epidermis (PO:0006016) and leaf vascular system (PO:0000036) and all the specialized cells of the vascular leaf. NMDCO_relaxed.owl PO:0001055 biolink:NamedThing lemma primordia visible stage Stage of lemma development that begins when the lemma primordia arise. NMDCO_relaxed.owl PO:0001056 biolink:NamedThing lemma differentiation and expansion stage Stage of lemma development defined by differentiation and expansion of lemma. NMDCO_relaxed.owl PO:0001057 biolink:NamedThing fully expanded lemma stage Stage of lemma development when lemma is fully expanded. NMDCO_relaxed.owl PO:0001058 biolink:NamedThing palea primordia visible stage Stage of palea development that begins when the palea primordia arise. NMDCO_relaxed.owl PO:0001070 biolink:NamedThing palea differentiation and expansion stage Stage of palea development defined by differentiation and expansion of palea. NMDCO_relaxed.owl PO:0001071 biolink:NamedThing fully expanded palea stage Stage of palea development when palea is fully expanded. NMDCO_relaxed.owl PO:0001072 biolink:NamedThing lodicule primordia visible stage Stage of lodicule development that begins when the lodicule primordia arise. NMDCO_relaxed.owl PO:0001077 biolink:NamedThing lodicule differentiation and expansion stage Stage of lodicule development defined by differentiation and expansion of lodicule. NMDCO_relaxed.owl PO:0001079 biolink:NamedThing fully expanded lodicule stage Stage of lodicule development when lodicule is fully expanded. NMDCO_relaxed.owl PO:0001074 biolink:NamedThing N second mitotic division stage in germinating pollen Stage of microgametophyte development during which the generative cell undergoes a mitotic division to form two male gametes, the sperm cells. NMDCO_relaxed.owl PO:0001078 biolink:NamedThing plant embryo cotyledonary stage A plant embryo development stage (PO:0007631) that occurs during the interval between the beginning of rapid elongation of the plant embryo axis (PO:0019018) and plant embryo cotyledons (PO:0025470), and the onset of a plant embryo true leaf formation stage (PO:0001095), when present, or a mature plant embryo stage (PO:0001081). NMDCO_relaxed.owl PO:0007631 biolink:NamedThing plant embryo development stage A sporophyte vegetative stage (PO:0007134) that occurs during the interval between the first cell division of a plant zygote (PO:0000423) and one of the following: the beginning of the seed germination stage (PO:0007057) in seed plants, formation of the first vascular leaf (PO:0009025) in pteridophytes, the beginning of development of a sporangium (PO:0025094) in bryophytes, or the beginning of the formation of a plant organ (PO:0009008) such as a root (PO:0009005), shoot axis (PO:0025029), or vascular leaf (PO:0009025) in a cultured plant embryo (PO:0000010). NMDCO_relaxed.owl PO:0001081 biolink:NamedThing mature plant embryo stage A plant embryo development stage (PO:0007631) during the interval between when a plant embryo (PO:0009009) has stopped developmental growth involved in morphogenesis (GO:0060560) and one of the following: the beginning of the seed germination stage (PO:0007057) in seed plants, formation of the first vascular leaf (PO:0009025) in pteridophytes, the beginning of development of a sporangium (PO:0025094) in bryophytes, or the beginning of the formation of a plant organ (PO:0009008) such as a root (PO:0009005), shoot axis (PO:0025029), or vascular leaf (PO:0009025) in a cultured plant embryo (PO:0000010). NMDCO_relaxed.owl PO:0001094 biolink:NamedThing plant embryo coleoptilar stage A plant embryo development stage (PO:0007631) that occurs during the interval between the beginning of elongation of the plant embryo axis (PO:0019018), with the formation of a plant embryo coleoptile (PO:0025286), a plant embryo shoot apical meristem (PO:0006362) and root apical meristem (PO:0020147), and ends with the onset of a plant embryo true leaf formation stage (PO:0001095), when present, or a mature plant embryo stage (PO:0001081). NMDCO_relaxed.owl PO:0001095 biolink:NamedThing plant embryo true leaf formation stage A plant embryo development stage (PO:0007631) that occurs during the interval between the beginning of the formation of the first vascular leaf primordium (PO:0000017) in the plant embryo proper (PO:0000001), and the onset of a mature plant embryo stage (PO:0001081). NMDCO_relaxed.owl PO:0001180 biolink:NamedThing plant proembryo stage A plant embryo development stage (PO:0007631) that occurs during the interval between the first cell division of a plant zygote (PO:0000423) and the onset of the plant globular embryo stage (PO:0001185). NMDCO_relaxed.owl PO:0001185 biolink:NamedThing plant embryo globular stage A plant embryo development stage (PO:0007631) that occurs during the interval between when a plant embryo proper (PO:0000001) increases in diameter through cell division, but retains radial symmetry (with the concomitant formation of a protoderm (PO:0006210)), and the onset of a plant embryo bilateral stage (PO:0004507). NMDCO_relaxed.owl PO:0004507 biolink:NamedThing plant embryo bilateral stage A plant embryo development stage (PO:0007631) that occurs during the interval between the transition from radial to bilateral symmetry in a plant embryo proper (PO:0000001) and the onset of either the plant embryo cotyledonary stage (PO:0001078) or the plant embryo coleoptilar stage (PO:0001094). NMDCO_relaxed.owl PO:0001083 biolink:NamedThing inflorescence development stage A reproductive shoot system development stage (PO:0025530) that has as primary participant a inflorescence (PO:0009049). NMDCO_relaxed.owl PO:0025530 biolink:NamedThing reproductive shoot system development stage A shoot system development stage (PO:0025527) that has as primary participant a reproductive shoot system (PO:0025082). NMDCO_relaxed.owl PO:0007615 biolink:NamedThing flower development stage A reproductive shoot system development stage (PO:0025530) that occurs in an individual flower (PO:000904) during the interval between the onset of a flower meristem transition stage (PO:0025588) and the end of a flowering stage (PO:0007616). NMDCO_relaxed.owl PO:0001097 biolink:NamedThing plant zygote stage A sporophyte development stage (PO:0007134) that occurs during the interval between fertilization and the first cell division of the plant zygote (PO:0000423). NMDCO_relaxed.owl PO:0028002 biolink:NamedThing sporophyte development stage A whole plant development stage (PO:0007033) that has as primary participant a whole plant (PO:0000003) during the interval between fertilization (or apogamy) and death. NMDCO_relaxed.owl PO:0007017 biolink:NamedThing sporophyte senescent stage A sporophyte development stage (PO:0028002) during which a sporophyte participates in multicellular organism senescence. NMDCO_relaxed.owl PO:0007130 biolink:NamedThing sporophyte reproductive stage A sporophyte development stage that occurs during the interval between the initiation of a sporangium and the onset of senescence. NMDCO_relaxed.owl PO:0007132 biolink:NamedThing sporophyte dormant stage A sporophyte development stage during which a sporophyte participates in a dormancy process. NMDCO_relaxed.owl PO:0007134 biolink:NamedThing sporophyte vegetative stage A sporophyte development stage (PO:0028002) that occurs during the interval between the first division of a plant zygote (PO:0000423) and the formation of a sporangium (PO:0025094). NMDCO_relaxed.owl PO:0001099 biolink:NamedThing formation of aleurone and starchy layers stage Differentiation of aleurone layer, the outermost endosperm tissue, and the internal starchy tissue. NMDCO_relaxed.owl PO:0001378 biolink:NamedThing sepals enclosing meristem stage Stage of calyx development that begins when the developing sepals enclose the floral meristem. NMDCO_relaxed.owl PO:0001380 biolink:NamedThing sepals enclosing flower bud stage Stage of calyx development that begins when the sepals enclose the floral bud. NMDCO_relaxed.owl PO:0002002 biolink:NamedThing embryo basal cell A native plant cell (PO:0025606) that is the lower-most cell formed after the first division of the plant zygote (PO:0000423) and is part of a plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0020109 biolink:NamedThing embryo hypophysis A native plant cell (PO:0025606) that is the uppermost cell of a suspensor (PO:0020108) and from which part of the root (PO:0009005) and root cap (PO:0020123) in a plant embryo (PO:0009009) of angiosperms are derived. NMDCO_relaxed.owl PO:0025284 biolink:NamedThing embryo apical cell A sporophyte meristematic apical cell that is part of a plant embryo and is the uppermost cell formed after the first division of a zygote. NMDCO_relaxed.owl PO:0002004 biolink:NamedThing silk scar A cardinal part of multi-tissue plant structure (PO:0025498) which is composed of the shriveled remains of the silk (PO:0006488), and the base of the style (PO:0009074), and is located on the distal end of a developing or mature kernel (caryopsis fruit; PO:0030104). NMDCO_relaxed.owl PO:0006331 biolink:NamedThing seed raphe A cardinal part of multi-tissue plant structure (PO:0025498) that is a ridge on a seed (PO:0009010) that develops from a raphe (PO:0020027). NMDCO_relaxed.owl PO:0006332 biolink:NamedThing seed funicle A cardinal part of multi-tissue plant structure (PO:0025498) that is attached to a seed (PO:0009010) and is the remnants of a funicle (PO:0020006). NMDCO_relaxed.owl PO:0008001 biolink:NamedThing fruit distal end A cardinal part of multi-tissue plant structure (PO:0025498) that is the end of a fruit (PO:0009001) distal from a fruit pedicel (PO:0004536). NMDCO_relaxed.owl PO:0008002 biolink:NamedThing fruit proximal end A cardinal part of multi-tissue plant structure (PO:0025498) that is the end of a fruit (PO:0009001) proximal to a fruit pedicel (PO:0004536). NMDCO_relaxed.owl PO:0019022 biolink:NamedThing arilloid A cardinal part of multi-tissue plant structure (PO:0025498) that is a fleshy outgrowth of a seed (PO:0009010). NMDCO_relaxed.owl PO:0020063 biolink:NamedThing hilum A cardinal part of multi-tissue plant structure (PO:0025498) that is a scar on a seed (PO:0009010) at the place where it was attached to a funicle (PO:0020006). NMDCO_relaxed.owl PO:0020075 biolink:NamedThing mericarp A cardinal part of multi-tissue plant structure (PO:0025498) which is one carpellate unit of a schizocarp fruit (PO:0030098) consisting of pericarp (PO:0009084) and one or more seeds (PO:0009010). NMDCO_relaxed.owl PO:0025060 biolink:NamedThing lamina A cardinal part of multi-tissue plant structure (PO:0025498) that is thin and flat. NMDCO_relaxed.owl PO:0025593 biolink:NamedThing shoot-borne internode root A shoot-borne root (PO:0000042) that arises from a shoot axis internode (PO:0005005). NMDCO_relaxed.owl PO:0030089 biolink:NamedThing shoot-borne root spine A shoot-borne root (PO:0000042) that is sclerified and pointed. NMDCO_relaxed.owl PO:0003015 biolink:NamedThing primary root differentiation zone A root differentiation zone that is part of a primary root. NMDCO_relaxed.owl PO:0020135 biolink:NamedThing root differentiation zone A plant axis differentiation zone that is the part of a root and is located behind a root elongation zone. NMDCO_relaxed.owl PO:0003016 biolink:NamedThing lateral root differentiation zone A root differentiation zone that is part of a lateral root. NMDCO_relaxed.owl PO:0003017 biolink:NamedThing root cap of primary root A root cap that is part of a primary root tip. NMDCO_relaxed.owl PO:0020123 biolink:NamedThing root cap A portion of root parenchyma (PO:0025095) tissue that is part of the root tip (PO:0000025) and covers the root apical meristem (PO:0020147). NMDCO_relaxed.owl PO:0003018 biolink:NamedThing root cap of lateral root A root cap that is part of a lateral root tip. NMDCO_relaxed.owl PO:0003019 biolink:NamedThing central root cap of lateral root A central root cap that is part of a root cap of lateral root. NMDCO_relaxed.owl PO:0020130 biolink:NamedThing central root cap A portion of root parenchyma tissue that is the central part of a root cap in which the cells are arranged in longitudinal files. NMDCO_relaxed.owl PO:0003021 biolink:NamedThing central root cap of primary root A central root cap that is part of a root cap of primary root. NMDCO_relaxed.owl PO:0003020 biolink:NamedThing lateral root cap of lateral root A lateral root cap that is part of a root cap of lateral root. NMDCO_relaxed.owl PO:0020131 biolink:NamedThing lateral root cap A portion of root parenchyma tissue that is part of a root cap and is parallel to the sides of a root axis. NMDCO_relaxed.owl PO:0003022 biolink:NamedThing lateral root cap of primary root A lateral root cap (PO:0020131) that is part of a root cap (PO:0020123) of a primary root (PO:0020127). NMDCO_relaxed.owl PO:0003024 biolink:NamedThing stolon A branch (PO:0025073) that is prostrate or trailing, and produces adventitious nodal roots (PO:0003005) and sometimes erect shoots. NMDCO_relaxed.owl PO:0025172 biolink:NamedThing thorn A branch that is a sclerified, pointed outgrowth. NMDCO_relaxed.owl PO:0025364 biolink:NamedThing branch tendril A branch that is slender and coiling. NMDCO_relaxed.owl PO:0030021 biolink:NamedThing gametophore branch A branch that is part of a gametophore. NMDCO_relaxed.owl PO:0004001 biolink:NamedThing bulliform cell An enlarged more or less thin-walled leaf pavement cell, present, with other similar cells, in longitudinal rows in leaves of monocots. NMDCO_relaxed.owl PO:0025212 biolink:NamedThing leaf pavement cell An epidermal pavement cell that is part of a leaf epidermis. NMDCO_relaxed.owl PO:0004717 biolink:NamedThing long cell A more or less rectangular leaf pavement cell in which the proximodistal dimension is several times longer than the transverse dimension. NMDCO_relaxed.owl PO:0025213 biolink:NamedThing leaf abaxial pavement cell A leaf pavement cell that is part of a leaf abaxial epidermis. NMDCO_relaxed.owl PO:0025214 biolink:NamedThing leaf adaxial pavement cell A leaf pavement cell that is part of a leaf adaxial epidermis. NMDCO_relaxed.owl PO:0004006 biolink:NamedThing mesophyll cell A chlorenchyma cell that is part of a mesophyll. NMDCO_relaxed.owl PO:0025542 biolink:NamedThing bundle sheath chlorenchyma cell A chlorenchyma cell (PO:0000076) that is part of a bundle sheath (PO:0006023). NMDCO_relaxed.owl PO:0030001 biolink:NamedThing chloronema cell A chlorenchyma cell that is part of a chloronema and has cross walls of adjacent cells that are perpendicular to the protonema axis. NMDCO_relaxed.owl PO:0030002 biolink:NamedThing caulonema cell A chlorenchyma cell that is part of a caulonema and has cross walls of adjacent cells that are oblique to the protonema axis. NMDCO_relaxed.owl PO:0030007 biolink:NamedThing meristematic apical cell A single meristematic cell (PO:0004010) at the tip of a plant structure where apical growth occurs. NMDCO_relaxed.owl PO:0004501 biolink:NamedThing gynoecium differentiation and expansion stage Stage of gynoecium development defined by differentiation and expansion of carpels. NMDCO_relaxed.owl PO:0007606 biolink:NamedThing gynoecium development stage A collective phyllome structure development stage (PO:0025578) that has a primary participant a gynoecium (PO:0009062). NMDCO_relaxed.owl PO:0004502 biolink:NamedThing closure of carpel(s) stage Stage of gynoecium development defined by the closure of the carpel(s). NMDCO_relaxed.owl PO:0004503 biolink:NamedThing stigma cell differentiation stage Epidermal cells at the top of developing style differentiate stigma. NMDCO_relaxed.owl PO:0007618 biolink:NamedThing carpel primordium visible stage Stage of gynoecium development that begins when the carpel primordia arise. NMDCO_relaxed.owl PO:0007619 biolink:NamedThing ovule development stage Stages of development of the ovule defined by characteristic morphological, structural, histological or other visible features. NMDCO_relaxed.owl PO:0004504 biolink:NamedThing ovule differentiation and expansion stage Stage of ovule development defined by differentiation and expansion of ovules. NMDCO_relaxed.owl PO:0007620 biolink:NamedThing ovule primordium visible stage Stage of ovule development that begins when the ovule primordia arise. NMDCO_relaxed.owl PO:0004509 biolink:NamedThing glandular trichome A trichome (PO:0000282) that secretes or sequesters a portion of plant substance (PO:0025161). NMDCO_relaxed.owl PO:0004511 biolink:NamedThing seed trichome A trichome that develops from seed coat epidermis. NMDCO_relaxed.owl PO:0005003 biolink:NamedThing shoot axis trichome A trichome that is part of a shoot axis epidermis. NMDCO_relaxed.owl PO:0025186 biolink:NamedThing phyllome trichome A trichome that is part of a phyllome epidermis. NMDCO_relaxed.owl PO:0004512 biolink:NamedThing heartwood A portion of secondary xylem (PO:0005848) that lacks living secondary xylem parenchyma cells (PO:0004525). NMDCO_relaxed.owl PO:0005848 biolink:NamedThing secondary xylem A portion of xylem (PO:0005352) tissue that develops from a vascular cambium (PO:0005598). NMDCO_relaxed.owl PO:0004513 biolink:NamedThing sapwood A portion of secondary xylem (PO:0005848) that has as parts living secondary xylem parenchyma cells (PO:0004525). NMDCO_relaxed.owl PO:0004514 biolink:NamedThing growth ring A portion of secondary xylem (PO:0005848) that has as parts a single layer of early wood (PO:0004515) and a single layer of late wood (PO:0004516) from the same growth season and is part of a shoot axis (PO:0025029) or root (PO:0009005). NMDCO_relaxed.owl PO:0004515 biolink:NamedThing early wood A portion of secondary xylem (PO:0005848) that is a part of a growth ring (PO:0004514) formed during the early part of a growing season, has lower density than late wood (PO:0004516) of the same growth ring, and has as parts early wood tracheary elements (PO:0025461) with generally larger lumens than the late wood tracheary elements (PO:0025462) of the same growth ring. NMDCO_relaxed.owl PO:0004516 biolink:NamedThing late wood A portion of secondary xylem (PO:0005848) that is a part of a growth ring (PO:0004514) formed during the later part of a growing season, has higher density than early wood (PO:0004515) of the same growth ring, and has as parts late wood tracheary elements (PO:0025462) with generally smaller lumens than the early wood tracheary elements (PO:0025461) of the same growth ring. NMDCO_relaxed.owl PO:0004517 biolink:NamedThing growth ring boundary A portion of secondary xylem (PO:0005848) that includes the last-formed late wood (PO:0004516) of one growth ring (PO:0004514) and the earliest-formed early wood (PO:0004515) of the next growth ring. NMDCO_relaxed.owl PO:0025472 biolink:NamedThing reaction wood A portion of secondary xylem (PO:0005848) found on either the upper or lower side of a shoot axis (PO:0025029) that is or was angled away from vertical, with anatomical characteristics that depend on whether it is compression wood (PO:0025473) or tension wood (PO:0025474). NMDCO_relaxed.owl PO:0004522 biolink:NamedThing outer vascular cambium Cambium at the outer margin of the xylem cylinder. NMDCO_relaxed.owl PO:0005598 biolink:NamedThing vascular cambium A cambium (PO:0005597) that is located between and gives rise to secondary xylem (PO:0005848) and secondary phloem (PO:0005043). NMDCO_relaxed.owl PO:0004523 biolink:NamedThing included vascular cambium Cambium occurring within xylem. NMDCO_relaxed.owl PO:0006200 biolink:NamedThing fascicular cambium A portion of vascular cambium (PO:0005598) that develops from a procambium (PO:0025275) in a vascular bundle (PO:0005020) that is part of a shoot system (PO:0009006). NMDCO_relaxed.owl PO:0006201 biolink:NamedThing interfascicular cambium A portion of vascular cambium (PO:00055980) that develops from cells in an interfascicular region (PO:0006202) that is part of a shoot system (PO:0009006). NMDCO_relaxed.owl PO:0025437 biolink:NamedThing shoot axis vascular cambium A vascular cambium (PO:0005598) that is part of a shoot axis (PO:0025029). NMDCO_relaxed.owl PO:0025438 biolink:NamedThing root vascular cambium A vascular cambium (PO:0005598) that is part of a root (PO:0009005). NMDCO_relaxed.owl PO:0004524 biolink:NamedThing included phloem A portion of secondary phloem tissue produced by included vascular cambium. NMDCO_relaxed.owl PO:0005043 biolink:NamedThing secondary phloem A portion of phloem (PO:0005417) tissue that develops from a vascular cambium (PO:0005598). NMDCO_relaxed.owl PO:0004526 biolink:NamedThing axial secondary xylem parenchyma cell A secondary xylem parenchyma cell (PO:0004525) that is part of a portion of axial secondary xylem parenchyma (PO:0004533). NMDCO_relaxed.owl PO:0004527 biolink:NamedThing ray secondary xylem parenchyma cell A parenchyma cell (PO:0000074) that develops from a ray initial (PO:0000082) and is part of a portion of ray secondary xylem parenchyma (PO:0004534). NMDCO_relaxed.owl PO:0004528 biolink:NamedThing upright ray secondary xylem parenchyma cell A ray secondary xylem parenchyma cell (PO:0004527) that is oriented with its longest dimension parallel to the plant axis (PO:0025004) in which it is found. NMDCO_relaxed.owl PO:0004529 biolink:NamedThing procumbent ray secondary xylem parenchyma cell A ray secondary xylem parenchyma cell (PO:0004527) that is oriented with its longest dimension radial to the plant axis (PO:0025004) in which it is found. NMDCO_relaxed.owl PO:0004530 biolink:NamedThing tile cell Empty upright ray cell of approximately the same height as the procumbent ray cell and occurring in indeterminate horizontal series usually interspersed among the procumbent cells. NMDCO_relaxed.owl PO:0004531 biolink:NamedThing sheath cell Cell on the margin of, and tending to form a sheath around, the procumbent cells of a multi-seriate ray as seen in tangential section. NMDCO_relaxed.owl PO:0004532 biolink:NamedThing secondary xylem parenchyma A portion of parenchyma (PO:0005421) tissue that is part of a portion of secondary xylem (PO:0005848) and has as parts secondary xylem parenchyma cells (PO:0004525). NMDCO_relaxed.owl PO:0005426 biolink:NamedThing chlorenchyma Chloroplast-containing parenchyma tissue. NMDCO_relaxed.owl PO:0005702 biolink:NamedThing aerenchyma A portion of parenchyma tissue containing particularly large intercellular spaces of schizogenous or lysigenous origin. NMDCO_relaxed.owl PO:0006066 biolink:NamedThing petiole parenchyma A portion of parenchyma tissue that is part of a petiole. NMDCO_relaxed.owl PO:0006068 biolink:NamedThing sepal parenchyma A portion of parenchyma tissue that is part of a sepal. NMDCO_relaxed.owl PO:0006069 biolink:NamedThing petal parenchyma A portion of parenchyma (PO:0005421) tissue that is part of a petal (PO:0009032). NMDCO_relaxed.owl PO:0006109 biolink:NamedThing pith A maximal portion of parenchyma (PO:0005421) in the center of a shoot axis (PO:0025029) or root (PO:0009005). NMDCO_relaxed.owl PO:0020005 biolink:NamedThing placentoid A portion of parenchyma tissue that is part of a connective and projects into a pollen sac. NMDCO_relaxed.owl PO:0025035 biolink:NamedThing storage parenchyma A portion of parenchyma (PO:0005421) specialized for carbohydrate storage. NMDCO_relaxed.owl PO:0025058 biolink:NamedThing perimedullary zone A portion of parenchyma (PO:0005421) that is the outer layer of the pith (PO:0006109). NMDCO_relaxed.owl PO:0025095 biolink:NamedThing root parenchyma A portion of parenchyma tissue (PO:0005421) that is part of a root (PO:0009005). NMDCO_relaxed.owl PO:0030054 biolink:NamedThing epiphragm A portion of parenchyma tissue that forms a circular membrane extending from a spore capsule columella and attached to the ends of the peristome teeth that covers a spore capsule mouth. NMDCO_relaxed.owl PO:0004533 biolink:NamedThing axial secondary xylem parenchyma A portion of secondary xylem parenchyma (PO:0004532) that is part of an axial system (PO:0025410) and has as parts axial secondary xylem parenchyma cells (PO:0004526). NMDCO_relaxed.owl PO:0004534 biolink:NamedThing ray secondary xylem parenchyma A portion of secondary xylem parenchyma (PO:0004532) that is part of a ray system (PO:0025411) and has as parts ray secondary xylem parenchyma cells (PO:0004527). NMDCO_relaxed.owl PO:0004535 biolink:NamedThing fruit placenta A portion of placenta tissue (PO:0025078) that is part of a fruit (PO:0009001) and to which seeds (PO:0009010) are attached. NMDCO_relaxed.owl PO:0020001 biolink:NamedThing plant ovary placenta A portion of placenta tissue (PO:0025078) which is part of a plant ovary (PO:0009072), and to which plant ovary ovules (PO:0025490) are attached. NMDCO_relaxed.owl PO:0025272 biolink:NamedThing plant ovary replum A portion of ovary placenta tissue (PO:0020001) which divides a plant ovary (PO:0009072) into two or more chambers, and develops from contact of the placental tissue from opposite sides of the plant ovary early in gynoecium development (GO:0048467). NMDCO_relaxed.owl PO:0004536 biolink:NamedThing infructescence fruit pedicel A fruit pedicel (PO:0030114) that bears a fruit (PO:0009001) in an infructescence (PO:0006342). NMDCO_relaxed.owl PO:0030114 biolink:NamedThing fruit pedicel A pedicel (PO:0030112) that bears a fruit (PO:0009001). NMDCO_relaxed.owl PO:0004540 biolink:NamedThing fruit columella A columella (PO:0025230) that forms the central axis of a fruit. NMDCO_relaxed.owl PO:0025231 biolink:NamedThing spore capsule columella A columella (PO:0025230) that forms the central axis of a spore capsule. NMDCO_relaxed.owl PO:0025522 biolink:NamedThing tuber A plant axis (PO:0025004) that is radially enlarged. NMDCO_relaxed.owl PO:0004546 biolink:NamedThing epicormic shoot system A shoot-borne shoot system (PO:0004546) developing from a stem (PO:0009047). NMDCO_relaxed.owl PO:0006343 biolink:NamedThing axillary shoot system A shoot-borne shoot system (PO:0004545) that develops from an axillary bud (PO:0004709). NMDCO_relaxed.owl PO:0004547 biolink:NamedThing subterranean shoot axis tuber A shoot axis tuber (PO:0004543) that develops below ground. NMDCO_relaxed.owl PO:0004548 biolink:NamedThing aerial tuber A shoot axis tuber (PO:0004543) that develops above ground. NMDCO_relaxed.owl PO:0004701 biolink:NamedThing short shoot Shoot system in which the internodes elongate little or at all, bearing reproductive structures and/or leaves. NMDCO_relaxed.owl PO:0004702 biolink:NamedThing long shoot Shoot system in which all or most of the internodes elongate. NMDCO_relaxed.owl PO:0005001 biolink:NamedThing basal axillary shoot system An axillary shoot system (PO:0006343) that is part of a stem base (PO:0008039). NMDCO_relaxed.owl PO:0005002 biolink:NamedThing cauline axillary shoot An axillary branch that forms from a leaf above the very base of the shoot. NMDCO_relaxed.owl PO:0025003 biolink:NamedThing tuber axillary shoot An axillary shoot that develops from a tuber axillary bud. NMDCO_relaxed.owl PO:0004707 biolink:NamedThing fruit dehiscence zone A dehiscence zone (PO:0025092) that is part of a fruit. NMDCO_relaxed.owl PO:0005011 biolink:NamedThing anther dehiscence zone A dehiscence zone (PO:0025092) that is part of an anther (PO:0009066). NMDCO_relaxed.owl PO:0025093 biolink:NamedThing spore capsule annulus A dehiscence zone (PO:0025092) that is part of a spore capsule. NMDCO_relaxed.owl PO:0020141 biolink:NamedThing stem node A shoot axis node (PO:0005004) that is part of a stem (PO:0009047). NMDCO_relaxed.owl PO:0025321 biolink:NamedThing cotyledonary node A stem node (PO:0020141) from which cotyledons (PO:0020030) may develop. NMDCO_relaxed.owl PO:0004710 biolink:NamedThing axillary flower bud An axillary bud that develops into a flower. NMDCO_relaxed.owl PO:0004714 biolink:NamedThing terminal flower bud A terminal bud that develops into a flower. NMDCO_relaxed.owl PO:0004711 biolink:NamedThing axillary inflorescence bud An axillary reproductive bud that develops into an inflorescence. NMDCO_relaxed.owl PO:0025076 biolink:NamedThing axillary strobilus bud An axillary reproductive bud that develops into a strobilus. NMDCO_relaxed.owl PO:0004715 biolink:NamedThing terminal inflorescence bud A terminal reproductive bud develops into an inflorescence. NMDCO_relaxed.owl PO:0004712 biolink:NamedThing axillary vegetative bud An axillary bud (PO:0004712) that develops into a shoot system (PO:0009006) that has as organ parts only vegetative organs. NMDCO_relaxed.owl PO:0004716 biolink:NamedThing terminal vegetative bud A terminal bud (PO:0004713) that develops into a shoot system (PO:0009006) that has as organ parts only vegetative organs. NMDCO_relaxed.owl PO:0030026 biolink:NamedThing gametophore bud A vegetative bud that develops into a gametophore. NMDCO_relaxed.owl PO:0025077 biolink:NamedThing terminal strobilus bud A terminal reproductive bud that develops into a strobilus. NMDCO_relaxed.owl PO:0004719 biolink:NamedThing hilum groove A canal (PO:0025132) that is a longitudinal groove in the testa through a prominent hilum (PO:0020063) of a seed (PO:0009010). NMDCO_relaxed.owl PO:0025132 biolink:NamedThing canal A plant anatomical space (PO:0025117) that is either a groove on the surface, or a tube in the interior of a plant structure (PO:0009011). NMDCO_relaxed.owl PO:0005665 biolink:NamedThing resin canal A canal (PO:0025132) of schizogenous origin, lined with secretory resin cells (PO:0025604) and containing plant resin (PO:0025603). NMDCO_relaxed.owl PO:0025133 biolink:NamedThing petiole canal A canal that is part of a petiole. NMDCO_relaxed.owl PO:0030066 biolink:NamedThing archegonium neck canal A canal (PO:0025132) in the center of an archegonium neck (PO:0030039). NMDCO_relaxed.owl PO:0005006 biolink:NamedThing articulated laticifer A portion of secretory tissue (PO:0005656) that has as parts articulated laticifer cells (PO:0006221). NMDCO_relaxed.owl PO:0005661 biolink:NamedThing salt gland A specialized tissue where excess salt absorbed in water from the soil is concentrated, being stores or excreted. NMDCO_relaxed.owl PO:0005669 biolink:NamedThing oil gland A gland or a cavity lined with cells that secrete oils. NMDCO_relaxed.owl PO:0005010 biolink:NamedThing anther septum A septum (PO:0000030) that is part of an anther dehiscence zone (PO:0005011). NMDCO_relaxed.owl PO:0025262 biolink:NamedThing plant ovary septum A septum (PO:0000030) that divides a multilocular plant ovary (PO:0009072). NMDCO_relaxed.owl PO:0025268 biolink:NamedThing fruit septum A septum that divides a cavity or mass of tissue in a fruit and develops from an ovary septum. NMDCO_relaxed.owl PO:0005012 biolink:NamedThing pedicel vascular system A shoot axis vascular system (PO:0000039) that includes the totality of the portions of vascular tissue in their specific arrangement in a pedicel (PO:0030112). NMDCO_relaxed.owl PO:0005013 biolink:NamedThing hypocotyl epidermis A portion of stem epidermis (PO:0025178) which is the outermost primary cell layer of the hypocotyl (PO:0020100). NMDCO_relaxed.owl PO:0025178 biolink:NamedThing stem epidermis A portion of shoot axis epidermis (PO:0000112) that is part of a stem (PO:0009047). NMDCO_relaxed.owl PO:0005015 biolink:NamedThing embryo endodermis A portion of endodermis (PO:0000252) that is part of an plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0006362 biolink:NamedThing embryo shoot apical meristem A vegetative shoot apical meristem at the apex of the embryonic axis. NMDCO_relaxed.owl PO:0008048 biolink:NamedThing scutellar epithelium A continuous layer of cylindrical cells covering the endosperm side of the scutellum. Thought to act as a secretory and absorptive organ. NMDCO_relaxed.owl PO:0025432 biolink:NamedThing cotyledon anlagen A phyllome anlagen (PO:0025430) that will give rise to a cotyledon primordium (PO:0000015) and is part of a peripheral zone (PO:000225) of an embryo shoot apical meristem (PO:0006362). NMDCO_relaxed.owl PO:0005058 biolink:NamedThing shoot axis endodermis A portion of endodermis (PO:0000252) that is part of a shoot axis cortex (PO:0000223). NMDCO_relaxed.owl PO:0005059 biolink:NamedThing root endodermis A portion of endodermis that is part of a root cortex. NMDCO_relaxed.owl PO:0005060 biolink:NamedThing leaf endodermis A portion of endodermis that is part of a vascular leaf. NMDCO_relaxed.owl PO:0006065 biolink:NamedThing hypocotyl endodermis A portion of endodermis (PO:0000252) that is part of a hypocotyl (PO:0020100). NMDCO_relaxed.owl PO:0005017 biolink:NamedThing flower vascular system A shoot system vascular system (PO:0025205) that includes the totality of the portions of vascular tissue in their specific arrangement in a flower (PO:0009046). NMDCO_relaxed.owl PO:0005028 biolink:NamedThing inflorescence vascular system A shoot system vascular system (PO:0025205) that includes the totality of the portions of vascular tissue in their specific arrangement in an inflorescence (PO:0009049). NMDCO_relaxed.owl PO:0005021 biolink:NamedThing sepal margin A phyllome margin (PO:0025018) which is part of a sepal (PO:0009031). NMDCO_relaxed.owl PO:0025018 biolink:NamedThing phyllome margin A plant organ margin (PO:0025005) that is part of a phyllome lamina (PO:0025396). NMDCO_relaxed.owl PO:0020128 biolink:NamedThing leaf margin A phyllome margin (PO:0025018) that is part of a leaf (PO:0025034). NMDCO_relaxed.owl PO:0025008 biolink:NamedThing petal margin A phyllome margin (PO:0025018) which is part of a petal (PO:0009032). NMDCO_relaxed.owl PO:0025011 biolink:NamedThing bract margin A phyllome margin (PO:0025018) that is part of a bract (PO:0009055). NMDCO_relaxed.owl PO:0025013 biolink:NamedThing prophyll margin A phyllome margin (PO:0025018) that is part of a prophyll (PO:0009042). NMDCO_relaxed.owl PO:0025014 biolink:NamedThing scale leaf margin A phyllome margin (PO:0025018) that is part of scale leaf (PO:0006003). NMDCO_relaxed.owl PO:0025015 biolink:NamedThing tepal margin A phyllome margin (PO:0025018) that is part of a tepal (PO:0009033). NMDCO_relaxed.owl PO:0025016 biolink:NamedThing sporophyll margin A phyllome margin (PO:0025018) that is part of a sporophyll (PO:0009026). NMDCO_relaxed.owl PO:0005023 biolink:NamedThing plant ovary outer epidermis A portion of plant ovary epidermis (PO:0006063) which is the outer surface of a plant ovary (PO:0009072). NMDCO_relaxed.owl PO:0006063 biolink:NamedThing plant ovary epidermis A portion of plant epidermis (PO:0005679) that is part of an plant ovary wall (PO:0005022). NMDCO_relaxed.owl PO:0005024 biolink:NamedThing plant ovary inner epidermis A portion of plant ovary epidermis (PO:0006063) which is the inner surface of a plant ovary (PO:0009072). NMDCO_relaxed.owl PO:0005025 biolink:NamedThing plant ovary wall middle layer A portion of chlorenchyma tissue (PO:0005426) that is part of the plant ovary wall (PO:0005022) and is composed of mesophyll cells (PO:0004006). NMDCO_relaxed.owl PO:0006070 biolink:NamedThing mesophyll The chloroplast-containing, photosynthetic parenchymatous tissue situated between the two epidermal layers of the leaf or leaf like organs. NMDCO_relaxed.owl PO:0030003 biolink:NamedThing protonema A portion of chlorenchyma tissue that develops directly from a spore and grows by division of an apical cell to form filaments that are one cell wide and dichotomously branching. NMDCO_relaxed.owl PO:0025481 biolink:NamedThing leaflet primordium A primordium (PO:0025127) that develops as part of a leaf primordium (PO:0000017) of a compound leaf (PO:0020043) and is committed to the development of a leaflet (PO:0020049). NMDCO_relaxed.owl PO:0005030 biolink:NamedThing lupulin gland A glandular trichome (PO:0004509) that synthesizes terpenophenolic resins and prenylflavonoids. NMDCO_relaxed.owl PO:0005031 biolink:NamedThing microsporangiate strobilus A strobilus (PO:0025083) that bears only pollen (PO:0025281). NMDCO_relaxed.owl PO:0025083 biolink:NamedThing strobilus A reproductive shoot system (PO:0025082) consisting of a number of sporophylls (PO:0009026) or plant ovule (PO:0020003)-bearing modified leaves (PO:0025034) grouped terminally on a stem (PO:0009047). NMDCO_relaxed.owl PO:0005032 biolink:NamedThing megasporangiate strobilus A strobilus (PO:0025083) that bears only plant ovules (PO:0020003). NMDCO_relaxed.owl PO:0005039 biolink:NamedThing primary thickening meristem A shoot lateral meristem (PO:0006344) that is part of a shoot axis (PO:0025029) and has a parts multiple layers of meristematic cells (PO:0004010) located near the shoot apical meristem (PO:0020148). NMDCO_relaxed.owl PO:0006344 biolink:NamedThing shoot lateral meristem A lateral meristem (PO:0020145) that is part of a shoot axis (PO:0025029). NMDCO_relaxed.owl PO:0005040 biolink:NamedThing root pith A portion of pith (PO:0006109) that is part of a root stele (PO:0020124). NMDCO_relaxed.owl PO:0005041 biolink:NamedThing shoot axis pith A portion of pith (PO:0006109) that is part of a shoot axis (PO:0025029). NMDCO_relaxed.owl PO:0025052 biolink:NamedThing tuber pith A portion of pith (PO:0006109) that is part of a tuber storage parenchyma (PO:0025036). NMDCO_relaxed.owl PO:0025590 biolink:NamedThing receptacle pith A portion of pith (PO:0006109) that is part of a receptacle (PO:0009064). NMDCO_relaxed.owl PO:0006075 biolink:NamedThing primary phloem A portion of phloem (PO:0005417) tissue that develops from the procambium (PO:0025275). NMDCO_relaxed.owl PO:0025416 biolink:NamedThing sieve tube A portion of phloem tissue (PO:0005417) that has as parts a series of sieve tube elements (PO:0000289) arranged end to end and interconnected through sieve plates. NMDCO_relaxed.owl PO:0025410 biolink:NamedThing axial system A portion of secondary vascular tissue (PO:0025409) that has as parts cells derived from fusiform initials (PO:0000079) and oriented with their longest diameter parallel to a plant axis (PO:0025004). NMDCO_relaxed.owl PO:0025411 biolink:NamedThing ray system A portion of secondary vascular tissue (PO:0025409) that has as part ray wood parenchyma (PO:0004534) and extends radially in the secondary xylem (PO:0005848) and secondary phloem (PO:0005848) of a plant axis (PO:0025004). NMDCO_relaxed.owl PO:0005057 biolink:NamedThing shoot axis hypodermis A portion of shoot axis hypodermis (PO:0005057) that is part of a stem cortex (PO:0000223). NMDCO_relaxed.owl PO:0005772 biolink:NamedThing exodermis The sub-epidermal layer or layers of cells of the root similar in structure and cytochemical characteristics of the endodermis, the outermost layer or layers of cells of the cortex. NMDCO_relaxed.owl PO:0005415 biolink:NamedThing endosperm parenchyma A portion of seed storage parenchyma that is part of an endosperm. NMDCO_relaxed.owl PO:0025067 biolink:NamedThing seed storage parenchyma A portion of storage parenchyma that is part of a seed. NMDCO_relaxed.owl PO:0005597 biolink:NamedThing cambium A lateral meristem (PO:0020145) that has as part a single layer of cambial initial cells (PO:0000295) and their derivatives, arranged orderly in radial files. NMDCO_relaxed.owl PO:0006308 biolink:NamedThing root lateral meristem A lateral meristem (PO:0020145) that is part of a root (PO:0009005). NMDCO_relaxed.owl PO:0025414 biolink:NamedThing secondary thickening meristem A lateral meristem (PO:0020145) that is not contiguous with an apical meristem (PO:0020144) and has a parts multiple layers of meristematic cells (PO:0004010). NMDCO_relaxed.owl PO:0005599 biolink:NamedThing cork cambium A cambium (PO:0005597) that is part of a periderm (PO:0005046) and produces phellem (PO:0004003) and phelloderm (PO:0005050). NMDCO_relaxed.owl PO:0005645 biolink:NamedThing leaf mesophyll The chloroplast-containing, photosynthetic parenchymatous tissue situated between the two epidermal layers of the foliage leaf. NMDCO_relaxed.owl PO:0005647 biolink:NamedThing spongy mesophyll Leaf mesophyll parenchyma characterized by little elongated cells, that are not closely packed and have conspicuous intercellular spaces. NMDCO_relaxed.owl PO:0005648 biolink:NamedThing palisade mesophyll Parenchyma containing closely packed elongated chlorenchymatous cells oriented perpendicular to the leaf surface and which are active in photosynthesis. NMDCO_relaxed.owl PO:0006071 biolink:NamedThing petal mesophyll The chloroplast-containing, photosynthetic parenchymatous tissue situated between the two epidermal layers of the petal. NMDCO_relaxed.owl PO:0006072 biolink:NamedThing sepal mesophyll The chloroplast-containing, photosynthetic parenchymatous tissue situated between the two epidermal layers of the sepal. NMDCO_relaxed.owl PO:0019026 biolink:NamedThing tracheid bar A portion of xylem (PO:0005352) tissue that is a distinct ring-like structure composed of tracheids (PO:0000301), that is part of a seed (PO:0009010) and surrounds the hilum (PO:0020063) and forms a groove in the surface of the pericarp (PO:0009084) immediately adjacent to the hilum. NMDCO_relaxed.owl PO:0025417 biolink:NamedThing xylem vessel A portion of xylem (PO:0005352) tissue that has as parts a tube-like series of vessel members (PO:0002003), the common walls of which have perforations. NMDCO_relaxed.owl PO:0006000 biolink:NamedThing caryopsis hull A collective phyllome structure that encloses a fruit of the Poaceae (caryopsis) and develops from a dried lemma and palea. NMDCO_relaxed.owl PO:0025023 biolink:NamedThing collective phyllome structure A collective plant organ structure (PO:0025007) that consists of two or more phyllomes (PO:0006001) originating from the same node or from one or more adjacent nodes with compressed shoot internodes (PO:0005005). NMDCO_relaxed.owl PO:0009058 biolink:NamedThing perianth A collective phyllome structure (PO:0025023) that includes as parts the corolla (PO:0009059) and/or the calyx (PO:0009060); or one or more tepals (PO:0009033). NMDCO_relaxed.owl PO:0009059 biolink:NamedThing corolla A collective phyllome structure (PO:0025023) that is composed of one or more petals (PO:0009032), comprising the inner whorl of non-reproductive floral organs (PO:0025395) and surrounds the androecium (PO:0009061) and the gynoecium (PO:0009062). NMDCO_relaxed.owl PO:0009060 biolink:NamedThing calyx A collective phyllome structure (PO:0025023) that is composed of one or more sepals (PO:0009031), and comprises the outer whorl of non-reproductive floral organs (PO:0025395). NMDCO_relaxed.owl PO:0009061 biolink:NamedThing androecium A collective phyllome structure (PO:0025023) composed all of the stamens (PO:0009029) in a flower (PO:0009046). NMDCO_relaxed.owl PO:0009062 biolink:NamedThing gynoecium A collective phyllome structure (PO:0025023) composed all of the carpels (PO:0009030) in a flower (PO:0009046). NMDCO_relaxed.owl PO:0009063 biolink:NamedThing epicalyx A collective phyllome structure (PO:0025023) composed of two or more phyllomes immediately outside the calyx (PO:0009060). NMDCO_relaxed.owl PO:0009100 biolink:NamedThing involucre A collective phyllome structure composed of two or more involucral bracts at the base of a cluster of flowers, as found in Asteraceae or Compositae. NMDCO_relaxed.owl PO:0025022 biolink:NamedThing collective leaf structure A collective phyllome structure (PO:0025023) composed of two or more leaves (PO:0025034). NMDCO_relaxed.owl PO:0025327 biolink:NamedThing keel A boat-shaped collective phyllome structure (PO:0025023) that consists of the two lowest petals (PO:0009032) of a papilionaceous corolla (PO:0009059). NMDCO_relaxed.owl PO:0030031 biolink:NamedThing gametophyte perianth A collective phyllome structure that consists of two or more of the most distal perichaetal bracts on a gametophore axis and surround a capsule. NMDCO_relaxed.owl PO:0006001 biolink:NamedThing phyllome A lateral plant organ (PO:0009008) produced by a shoot apical meristem (PO:0020148). NMDCO_relaxed.owl PO:0009008 biolink:NamedThing plant organ A multi-tissue plant structure (PO:0025496) that is a functional unit, is a proper part of a whole plant (PO:0000003), and includes portions of plant tissue (PO:0009007) of at least two different types that derive from a common developmental path. NMDCO_relaxed.owl PO:0020003 biolink:NamedThing plant ovule A plant organ (PO:0009008) that has as parts a nucellus (PO:0020020) in which a female gametophyte (PO:0025279) is located, one or two integuments (PO:0020021), and a funicle (PO:0020006). NMDCO_relaxed.owl PO:0020033 biolink:NamedThing coleoptile A sheath-like plant organ (PO:0009008) that surrounds the plumule (PO:0020032) of a plant embryo (PO:0009009) or the emerging shoot apex (PO:0000037) of a seedling. NMDCO_relaxed.owl PO:0020034 biolink:NamedThing coleorhiza A sheath-like plant organ (PO:0009008) that surrounds the radicle (PO:0020031) of a plant embryo (PO:0009009) or the emerging root (PO:0009005) of a seedling (PO:0000003). NMDCO_relaxed.owl PO:0025004 biolink:NamedThing plant axis An axial plant organ (PO:0009008). NMDCO_relaxed.owl PO:0025094 biolink:NamedThing sporangium A plant organ (PO:0009008) in which plant spores (PO:0025017) are produced. NMDCO_relaxed.owl PO:0025124 biolink:NamedThing multicellular plant gametangium A plant organ (PO:0009008) that produces one or more gametes (PO:0025006) and participates in the gametophyte development stage (PO:0028003). NMDCO_relaxed.owl PO:0025395 biolink:NamedThing floral organ A plant organ (PO:0009008) that is part of a flower (PO:0009046). NMDCO_relaxed.owl PO:0030029 biolink:NamedThing sporophyte foot A plant organ that is the base of a whole plant in the sporophytic phase and attaches it to the gametophore. NMDCO_relaxed.owl PO:0006002 biolink:NamedThing lower glume A glume that is the proximal/basal of the two glumes subtending a pair of florets. NMDCO_relaxed.owl PO:0009039 biolink:NamedThing glume One of a pair of inflorescence bracts that is part of a spikelet and subtends the two florets. NMDCO_relaxed.owl PO:0006004 biolink:NamedThing upper glume A glume that is the apical/distal of the two glumes subtending a pair of florets. NMDCO_relaxed.owl PO:0006367 biolink:NamedThing glume of ear spikelet A glume that is part of an ear spikelet. NMDCO_relaxed.owl PO:0006368 biolink:NamedThing glume of tassel spikelet A glume that is part of a tassel spikelet. NMDCO_relaxed.owl PO:0006003 biolink:NamedThing scale leaf A phyllome that is reduced in size relative to a vascular leaf on the same plant and is often associated with a perennating or dormant bud or a vegetatively propagating organ such as a rhizome. NMDCO_relaxed.owl PO:0009026 biolink:NamedThing sporophyll A leaf-like organ on which one or more sporangia are borne. NMDCO_relaxed.owl PO:0009031 biolink:NamedThing sepal A phyllome (PO:0006001) that is usually green, and is part of the calyx (PO:0009060). NMDCO_relaxed.owl PO:0009032 biolink:NamedThing petal A phyllome (PO:0006001) that is part of the corolla (PO:0009059), and is usually colored (not green). NMDCO_relaxed.owl PO:0009033 biolink:NamedThing tepal A phyllome (PO:0006001) that is part of a perianth (PO:0009058) where it is not possible to distinguish between the petals (PO:0009032) and sepals (PO:0009031). NMDCO_relaxed.owl PO:0009036 biolink:NamedThing lodicule A phyllome that is part of a grass floret and is one of two or three tiny scales or flaps of tissue outside the stamens. NMDCO_relaxed.owl PO:0009042 biolink:NamedThing prophyll A phyllome that is the first organ or one of the first two organs formed at the base of an axillary shoot, often smaller and/or in a distinctively different position from leaves formed subsequently. NMDCO_relaxed.owl PO:0009055 biolink:NamedThing bract A phyllome that subtends a reproductive structure. NMDCO_relaxed.owl PO:0025245 biolink:NamedThing persistent sepal A phyllome that develops from a sepal and remains attached to a fruit at maturity. NMDCO_relaxed.owl PO:0025246 biolink:NamedThing persistent tepal A phyllome (PO:0006001) that develops from a tepal (PO:0009033) and remains attached to a fruit (PO:0009001) at maturity. NMDCO_relaxed.owl PO:0025247 biolink:NamedThing persistent stamen A phyllome that develops from a stamen and remains attached to a fruit at maturity. NMDCO_relaxed.owl PO:0006005 biolink:NamedThing carpel anlagen A phyllome anlagen (PO:0025430) that will give rise to a carpel primordium (PO:0004703) and is part of a peripheral zone (PO:000225) of a flower meristem (PO:0000229). NMDCO_relaxed.owl PO:0025431 biolink:NamedThing vascular leaf anlagen A phyllome anlagen (PO:0025430) that will give rise to a vascular leaf primordium (PO:0000017) and is part of a peripheral zone (PO:0000225) of a shoot apical meristem (PO:0020148). NMDCO_relaxed.owl PO:0025482 biolink:NamedThing bract anlagen A phyllome anlagen (PO:0025430) that will give rise to a bract primordium (PO:0025487) and is part of a peripheral zone (PO:000225) of a reproductive shoot apical meristem (PO:0008028). NMDCO_relaxed.owl PO:0025483 biolink:NamedThing lodicule anlagen A phyllome anlagen (PO:0025430) that will give rise to a lodicule primordium (PO:0008040) and is part of a peripheral zone (PO:000225) of a flower meristem (PO:0000229). NMDCO_relaxed.owl PO:0025484 biolink:NamedThing petal anlagen A phyllome anlagen (PO:0025430) that will give rise to a petal primordium (PO:0000021) and is part of a peripheral zone (PO:000225) of a flower meristem (PO:0000229). NMDCO_relaxed.owl PO:0025485 biolink:NamedThing sepal anlagen A phyllome anlagen (PO:0025430) that will give rise to a sepal primordium (PO:0004704) and is part of a peripheral zone (PO:000225) of a flower meristem (PO:0000229). NMDCO_relaxed.owl PO:0025486 biolink:NamedThing stamen anlagen A phyllome anlagen (PO:0025430) that will give rise to a stamen primordium (PO:0004705) and is part of a peripheral zone (PO:000225) of a flower meristem (PO:0000229). NMDCO_relaxed.owl PO:0006008 biolink:NamedThing anther wall inner secondary parietal cell layer An anther wall secondary parietal cell layer (PO:0006007) that is formed towards the inside, after the cells of an anther wall primary parietal cell layer (PO:0006006) undergo a periclinal division. NMDCO_relaxed.owl PO:0006009 biolink:NamedThing anther wall outer secondary parietal cell layer An anther wall secondary parietal cell layer (PO:0006007) formed towards the outside, after an anther wall primary parietal cell layer (An anther wall secondary parietal cell layer (PO:0006006) undergoes a periclinal division. NMDCO_relaxed.owl PO:0006011 biolink:NamedThing lateral leaf vein An unbranched second order leaf vein (PO:0020140) that runs between two adjacent primary leaf veins (PO:0025413). NMDCO_relaxed.owl PO:0020140 biolink:NamedThing secondary leaf vein A leaf lamina vein (PO:0020138) arising from a primary leaf vein (PO:0025413). NMDCO_relaxed.owl PO:0006014 biolink:NamedThing male archesporial cell An archesporial cell (PO:0030056) that is part of a microsporangium (PO:0025202) and divides to gives rise to a microsporocyte (PO:0020047). NMDCO_relaxed.owl PO:0006015 biolink:NamedThing female archesporial cell An archesporial cell (PO:0030056) that is part of a megasporangium (PO:0025201) and divides to give rise to a megasporocyte (PO:0000431). NMDCO_relaxed.owl PO:0006040 biolink:NamedThing sepal epidermis A portion of phyllome epidermis (PO:0025157) that is part of a sepal (PO:0009031). NMDCO_relaxed.owl PO:0006041 biolink:NamedThing petal epidermis A portion of phyllome epidermis (PO:0025157) that is part of a petal (PO:0009032). NMDCO_relaxed.owl PO:0025096 biolink:NamedThing carpel epidermis A portion of phyllome epidermis (PO:0025157) that is part of a carpel (PO:0009030). NMDCO_relaxed.owl PO:0025097 biolink:NamedThing stamen epidermis A portion of phyllome epidermis (PO:0025157) that is part of a stamen (PO:0009029). NMDCO_relaxed.owl PO:0025158 biolink:NamedThing bract epidermis A portion of phyllome epidermis (PO:0025157) that is part of a bract (PO:0009055). NMDCO_relaxed.owl PO:0025184 biolink:NamedThing tepal epidermis A portion of phyllome epidermis (PO:0025157) that is part of a tepal (PO:0009033). NMDCO_relaxed.owl PO:0025215 biolink:NamedThing phyllome stomatal complex A stomatal complex (PO:0002000) that is part of a phyllome (PO:0006001). NMDCO_relaxed.owl PO:0006020 biolink:NamedThing lateral root apical meristem A root apical meristem (PO:0020147) that gives rise to a lateral root (PO:0020121). NMDCO_relaxed.owl PO:0020147 biolink:NamedThing root apical meristem A root meristem (PO:0006085) located at the root tip (PO:0000025), behind the root cap (PO:0020123). NMDCO_relaxed.owl PO:0006021 biolink:NamedThing shoot-borne root apical meristem A root apical meristem (PO:0020147) that gives rise to a shoot-borne root (PO:0000042). NMDCO_relaxed.owl PO:0006081 biolink:NamedThing primary root apical meristem A root apical meristem (PO:0020147) that gives rise to a primary root (PO:0020127). NMDCO_relaxed.owl PO:0006024 biolink:NamedThing parenchyma sheath A single layered, parenchymatous bundle sheath characterized by presence of large quantity of starch. NMDCO_relaxed.owl PO:0006025 biolink:NamedThing mestome sheath The inner endodermal sheath of a two layered bundle sheath. The cells are smaller in diameter compared to those in outer wall (starch sheath). The cell walls are thick and contain suberized lamellae. They are analogous to endodermis. NMDCO_relaxed.owl PO:0006032 biolink:NamedThing lemma awn An awn that is part of a lemma. NMDCO_relaxed.owl PO:0025350 biolink:NamedThing palea awn An awn that is part of a palea. NMDCO_relaxed.owl PO:0025351 biolink:NamedThing glume awn An awn that is part of a glume. NMDCO_relaxed.owl PO:0006036 biolink:NamedThing root epidermis A portion of epidermis (PO:0005679) that is part of a root (PO:0009005).|A portion of plant epidermis (PO:0005679) that is part of a root (PO:0009005). NMDCO_relaxed.owl PO:0006043 biolink:NamedThing integument epidermis A portion of plant epidermis (PO:0005679) that is part of an plant ovule integument (PO:0020021). NMDCO_relaxed.owl PO:0006048 biolink:NamedThing seed coat epidermis A portion of plant epidermis (PO:0005679) that is part of a seed coat (PO:0009088). NMDCO_relaxed.owl PO:0025169 biolink:NamedThing prickle A portion of epidermis (PO:0005679) that is a sclerified outgrowth. NMDCO_relaxed.owl PO:0030073 biolink:NamedThing exothecium A portion of plant epidermis (PO:0005679) that is the outermost layer of a sporangium wall (PO:0025306). NMDCO_relaxed.owl PO:0006039 biolink:NamedThing shoot-borne root epidermis A portion of root epidermis (PO:0006036) that is part of a shoot-borne root (PO:0000042). NMDCO_relaxed.owl PO:0006042 biolink:NamedThing velamen A multiseriate portion of root epidermis (PO:0006036) found in aerial roots of some monocots. Most of its cells are dead and store water like a sponge. NMDCO_relaxed.owl PO:0025170 biolink:NamedThing root prickle A prickle (PO:0025169) that is part of a root (PO:0009005) NMDCO_relaxed.owl PO:0006044 biolink:NamedThing inner integument epidermis A portion of integument epidermis (PO:0006043) of the inner integument (PO:0020022) in a plant ovule (PO:0020003). NMDCO_relaxed.owl PO:0006045 biolink:NamedThing outer integument epidermis A portion of integument epidermis (PO:0006043) of the outer integument (PO:0020023) in a plant ovule (PO:0020003). NMDCO_relaxed.owl PO:0006050 biolink:NamedThing exotesta A portion of seed coat epidermis (PO:0006048) which is part of the seed coat (PO:0009088), and develops from the outer surface of the outer integument (PO:0020023). NMDCO_relaxed.owl PO:0006051 biolink:NamedThing endotesta A portion of seed coat epidermis (PO:0006048) which is part of a seed coat (PO:0009088) and develops from the inner epidermis of the outer integument (PO:0020023). NMDCO_relaxed.owl PO:0006218 biolink:NamedThing exotegmen A portion of seed coat epidermis (PO:0006048) which is part of the seed coat (PO:0009088) and develops from the outer surface of the inner integument (PO:0020022). NMDCO_relaxed.owl PO:0006219 biolink:NamedThing endotegmen A portion of seed coat epidermis (PO:0006048) which is part of the seed coat (PO:0009088) and develops from the inner epidermis of the inner integument (PO:0020022). NMDCO_relaxed.owl PO:0020061 biolink:NamedThing coma A portion of seed coat epidermis (PO:0006048) that consists of multiple seed trichomes (PO:0004511) at the seed micropyle (PO:0006334). NMDCO_relaxed.owl PO:0006052 biolink:NamedThing petal abaxial epidermis A portion of petal epidermis (PO:0006041) that covers the abaxial/lower surface of a petal (PO:0009032). NMDCO_relaxed.owl PO:0006053 biolink:NamedThing petal adaxial epidermis A portion of petal epidermis (PO:0006041) that covers the adaxial/upper surface of a petal (PO:0009032). NMDCO_relaxed.owl PO:0025218 biolink:NamedThing petal stomatal complex A phyllome stomatal complex (PO:0025215) that is part of a petal (PO:0009032). NMDCO_relaxed.owl PO:0006054 biolink:NamedThing sepal abaxial epidermis A portion of sepal epidermis (PO:0006040) that covers the abaxial/lower surface of a sepal (PO:0009031). NMDCO_relaxed.owl PO:0006055 biolink:NamedThing sepal adaxial epidermis A portion of sepal epidermis (PO:0006040) that covers the adaxial/upper surface of a sepal (PO:0009031). NMDCO_relaxed.owl PO:0025219 biolink:NamedThing sepal stomatal complex A phyllome stomatal complex that is part of a sepal. NMDCO_relaxed.owl PO:0006057 biolink:NamedThing cotyledon abaxial epidermis A portion of leaf epidermis (PO:0006016) which is the abaxial/lower epidermis of the cotyledon (PO:0020030). NMDCO_relaxed.owl PO:0006058 biolink:NamedThing cotyledon adaxial epidermis A portion of leaf epidermis (PO:0006016) which is the adaxial/upper epidermis of the cotyledon (PO:0020030). NMDCO_relaxed.owl PO:0006060 biolink:NamedThing filament epidermis A portion of stamen epidermis (PO:0025097) that is part of a filament (PO:0009067). NMDCO_relaxed.owl PO:0020004 biolink:NamedThing anther wall exothecium An microsporangium exothecium (PO:0025311) that is part of an anther wall (PO:0000002). NMDCO_relaxed.owl PO:0025220 biolink:NamedThing stamen stomatal complex A phyllome stomatal complex that is part of a stamen. NMDCO_relaxed.owl PO:0006061 biolink:NamedThing stigma epidermis A portion of carpel epidermis (PO:0025096) that is part of a stigma (PO:0009073). NMDCO_relaxed.owl PO:0006062 biolink:NamedThing style epidermis A portion of carpel epidermis (PO:0025096) that is part of a style (PO:0009074). NMDCO_relaxed.owl PO:0025217 biolink:NamedThing carpel stomatal complex A phyllome stomatal complex that is part of a carpel. NMDCO_relaxed.owl PO:0025617 biolink:NamedThing carpel abaxial epidermis A portion of carpel epidermis (PO:0025096) that covers the abaxial surface of a carpel (PO:0009030). NMDCO_relaxed.owl PO:0025618 biolink:NamedThing carpel adaxial epidermis A portion of carpel epidermis (PO:0025096) that covers the adaxial surface of a carpel (PO:0009030). NMDCO_relaxed.owl PO:0006076 biolink:NamedThing metaphloem A portion of primary phloem (PO:0006075) tissue that has as parts companion cells (PO:0000071, in angiosperms) or albuminous cells (PO:0025412, in gymnosperms) associated with the sieve elements (PO:0025406) and that develops after the protophloem (PO:0006077). NMDCO_relaxed.owl PO:0006077 biolink:NamedThing protophloem A portion of primary phloem (PO:0006075) tissue has as parts the first-formed sieve elements (PO:0025406) at a particular location and does not have companion cells (PO:0000071, in angiosperms) or albuminous cells (PO:0025412, in gymnosperms) associated with the sieve elements. NMDCO_relaxed.owl PO:0006216 biolink:NamedThing internal phloem A portion of primary phloem tissue positioned internal to the primary xylem. NMDCO_relaxed.owl PO:0006082 biolink:NamedThing abaxial protoderm A portion of protoderm (PO:0006210) tissue that is the outermost layer of the shoot apical meristem (PO:0020148), and gives rise to the leaf abaxial epidermis (PO:0006019). NMDCO_relaxed.owl PO:0006083 biolink:NamedThing adaxial protoderm A portion of protoderm (PO:0006210) tissue that is the outermost layer of the shoot apical meristem (PO:0020148), and gives rise to the leaf adaxial epidermis (PO:0006018). NMDCO_relaxed.owl PO:0006090 biolink:NamedThing organogenic callus A cultured plant callus that is capable of forming plant organs. NMDCO_relaxed.owl PO:0006091 biolink:NamedThing embryogenic callus A cultured plant callus (PO:0000009) that is capable of forming somatic embryos. NMDCO_relaxed.owl PO:0006205 biolink:NamedThing spongy mesophyll cell Irregularly-shaped, chlorenchymatous cell, separated by large air spaces. NMDCO_relaxed.owl PO:0006206 biolink:NamedThing palisade mesophyll cell Elongated chlorenchymatous cell oriented perpendicular to the leaf surface and which is active in photosynthesis. NMDCO_relaxed.owl PO:0006207 biolink:NamedThing exodermal passage cell A short cell in the dimorphic type of exodermis with cell wall that remains non-thickened. NMDCO_relaxed.owl PO:0006208 biolink:NamedThing endodermal passage cell Cell in the endodermal layer of the root with cell wall that remains non-thickened. NMDCO_relaxed.owl PO:0006213 biolink:NamedThing root aerenchyma Parenchyma tissue containing particularly large intercellular spaces in the tissue of roots. NMDCO_relaxed.owl PO:0006214 biolink:NamedThing stem aerenchyma A portion of aerenchyma that is part of a stem. NMDCO_relaxed.owl PO:0006215 biolink:NamedThing leaf aerenchyma A portion of parenchyma tissue containing particularly large intercellular spaces in the leaf mesophyll. NMDCO_relaxed.owl PO:0006221 biolink:NamedThing articulated laticifer cell A laticifer cell (PO:0025031) that is joined longitudinally to other articulated laticifer cells to form a tube. NMDCO_relaxed.owl PO:0006222 biolink:NamedThing non-articulated laticifer cell A laticifer cell (PO:0025031) that is not joined longitudinally to other laticifer cells to form a tube. NMDCO_relaxed.owl PO:0006307 biolink:NamedThing root procambium A portion of procambium (PO:0025275) tissue that undergoes differentiation to form the primary vascular tissue (PO:0025408) of a root (PO:0009005). NMDCO_relaxed.owl PO:0025276 biolink:NamedThing shoot procambium A portion of procambium (PO:0025275) tissue that is part of a shoot system (PO:0009006). NMDCO_relaxed.owl PO:0006309 biolink:NamedThing tassel spikelet A spikelet (PO:0009051) that is part of the tassel inflorescence (PO:0020126) and bears tassel florets (PO:0006310) at maturity. NMDCO_relaxed.owl PO:0009051 biolink:NamedThing spikelet A reproductive shoot system (PO:0025082) that is the ultimate and congested, higher order inflorescence axis (PO:0009081) of the grasses. NMDCO_relaxed.owl PO:0006320 biolink:NamedThing ear spikelet A spikelet (PO:0009051) that is part of the ear inflorescence (PO:0020136) and bears a single ear floret (PO:0006354) at maturity. NMDCO_relaxed.owl PO:0006310 biolink:NamedThing tassel floret A small staminate flower (PO:0025600) that is part of a tassel spikelet (PO:0006309). NMDCO_relaxed.owl PO:0009082 biolink:NamedThing spikelet floret A small flower (PO:0009046) that is part of a spikelet (PO:0009051). NMDCO_relaxed.owl PO:0006354 biolink:NamedThing ear floret A small, pistillate flower (PO:0025599) that is part of a ear spikelet (PO:0006320). NMDCO_relaxed.owl PO:0025600 biolink:NamedThing staminate flower A flower (PO:0009046) that includes as part an androecium (PO:0009061), and the gynoecium (PO:0009062) is absent or has aborted during development. NMDCO_relaxed.owl PO:0006311 biolink:NamedThing tassel sessile spikelet A tassel spikelet (PO:0006309) which is the ultimate, sessile, higher order inflorescence axis (PO:0009081) of the maize tassel inflorescence (PO:0020126). NMDCO_relaxed.owl PO:0006312 biolink:NamedThing tassel pedicellate spikelet A tassel spikelet (PO:0006309) which is the ultimate, pedicellate, higher order inflorescence axis (PO:0009081) of the maize tassel inflorescence (PO:0020126). NMDCO_relaxed.owl PO:0006313 biolink:NamedThing lower floret of pedicellate spikelet of tassel A tassel floret that is the lower of the two florets of a pedicellate spikelet of a tassel inflorescence. NMDCO_relaxed.owl PO:0006314 biolink:NamedThing upper floret of pedicellate spikelet of tassel A tassel floret that is one of the two florets placed above the lower floret on a pedicellate spikelet rachilla of a tassel inflorescence. NMDCO_relaxed.owl PO:0006315 biolink:NamedThing lower floret of sessile spikelet of tassel A tassel floret that is the lower of the two florets of a sessile spikelet of a tassel inflorescence. NMDCO_relaxed.owl PO:0006316 biolink:NamedThing upper floret of sessile spikelet of tassel A tassel floret that is one of the two florets placed above the lower floret on a sessile spikelet rachilla of a tassel inflorescence. NMDCO_relaxed.owl PO:0006319 biolink:NamedThing spikelet pedicel Inflorescence branch that terminates in a spikelet. NMDCO_relaxed.owl PO:0009081 biolink:NamedThing higher order inflorescence axis An inflorescence axis (PO:0020122) that develops from an inflorescence axillary meristem (PO:0009105) of an inflorescence axis (PO:0020122). NMDCO_relaxed.owl PO:0006321 biolink:NamedThing second order inflorescence axis A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a first order inflorescence axis (PO:0025104). NMDCO_relaxed.owl PO:0006322 biolink:NamedThing third order inflorescence axis A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a second order inflorescence axis (PO:0006322). NMDCO_relaxed.owl PO:0006323 biolink:NamedThing tassel inflorescence branch An inflorescence branch (PO:0009081) arising on a first order tassel inflorescence axis (PO:0006324) or from a higher order inflorescence branch (PO:0009081) that is part of a tassel inflorescence (PO:0020126). NMDCO_relaxed.owl PO:0009080 biolink:NamedThing spikelet rachilla The axis of the spikelet, above the glumes. NMDCO_relaxed.owl PO:0025105 biolink:NamedThing fourth order inflorescence axis A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a third order inflorescence axis (PO:0025105). NMDCO_relaxed.owl PO:0025106 biolink:NamedThing fifth order inflorescence axis A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a fourth order inflorescence axis (PO:0025106). NMDCO_relaxed.owl PO:0025107 biolink:NamedThing sixth order inflorescence axis A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a fifth order inflorescence axis (PO:0025107). NMDCO_relaxed.owl PO:0025108 biolink:NamedThing seventh order inflorescence axis A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a sixth order inflorescence axis (PO:0025108). NMDCO_relaxed.owl PO:0025109 biolink:NamedThing eighth order inflorescence axis A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a seventh order inflorescence axis (PO:0025109). NMDCO_relaxed.owl PO:0025110 biolink:NamedThing ninth order inflorescence axis A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a eighth order inflorescence axis (PO:0025110). NMDCO_relaxed.owl PO:0025111 biolink:NamedThing tenth order inflorescence axis A higher order inflorescence axis (PO:0009081) that develops from an inflorescence axillary meristem (PO:0009105) of a ninth order inflorescence axis (PO:0025110). NMDCO_relaxed.owl PO:0006324 biolink:NamedThing first order tassel inflorescence axis A first order inflorescence axis (PO:0025104) that is the primary axis of a tassel inflorescence (PO:0020126). NMDCO_relaxed.owl PO:0025104 biolink:NamedThing first order inflorescence axis An inflorescence axis (PO:0020122) that is the primary or main axis of an inflorescence (PO:0009049). NMDCO_relaxed.owl PO:0006505 biolink:NamedThing first order ear inflorescence axis A first order inflorescence axis (PO:0025104) that is the primary axis of an ear inflorescence (PO:0020136). NMDCO_relaxed.owl PO:0006325 biolink:NamedThing inflorescence axis node A shoot axis node (PO:0005004) that is part of an inflorescence axis (PO:0020122). NMDCO_relaxed.owl PO:0025024 biolink:NamedThing branch node A shoot axis node (PO:0005004) that is part of a branch (PO:0025073). NMDCO_relaxed.owl PO:0006326 biolink:NamedThing inflorescence axis internode A shoot axis internode (PO:0005005) that is part of an inflorescence axis (PO:0020122). NMDCO_relaxed.owl PO:0020142 biolink:NamedThing stem internode A shoot axis internode (PO:0005005) that is part of a stem (PO:0009047). NMDCO_relaxed.owl PO:0025080 biolink:NamedThing branch internode A shoot axis internode (PO:0005005) that is part of a branch (PO:0025073). NMDCO_relaxed.owl PO:0025204 biolink:NamedThing rhizome internode A shoot axis internode (PO:0005005) that is part of a rhizome (PO:0004542). NMDCO_relaxed.owl PO:0006327 biolink:NamedThing spikelet meristem An inflorescence apical meristem that gives rise to the two or more florets of a grass inflorescence. NMDCO_relaxed.owl PO:0006375 biolink:NamedThing ear apical meristem An inflorescence apical meristem that gives rise to the maize ear. NMDCO_relaxed.owl PO:0006376 biolink:NamedThing tassel apical meristem An inflorescence apical meristem that gives rise to the maize tassel. NMDCO_relaxed.owl PO:0006328 biolink:NamedThing spikelet pair meristem The meristem that produces two spikelet meristems, each of which produces two floral meristems. NMDCO_relaxed.owl PO:0006377 biolink:NamedThing tassel spikelet meristem Apical meristem that gives rise to the upper and lower florets of the maize tassel spikelets. NMDCO_relaxed.owl PO:0006378 biolink:NamedThing ear spikelet meristem Apical meristem that gives rise to the upper and lower florets of the maize ear spikelet. NMDCO_relaxed.owl PO:0009029 biolink:NamedThing stamen A microsporophyll bearing one or more microsporangia. NMDCO_relaxed.owl PO:0009030 biolink:NamedThing carpel A megasporophyll, almost always at the center of a flower, its margins more or less fused together or with other carpels to enclose the ovule(s). NMDCO_relaxed.owl PO:0009034 biolink:NamedThing flower bract A bract (PO:0009055) that subtends a perianth (PO:0009058) that is part of a flower (PO:0009046). NMDCO_relaxed.owl PO:0009077 biolink:NamedThing staminode Sterile stamen. NMDCO_relaxed.owl PO:0025490 biolink:NamedThing plant ovary ovule A plant ovule (PO:0020006) that is part of a plant ovary (PO:0009072). NMDCO_relaxed.owl PO:0006334 biolink:NamedThing seed micropyle A plant anatomical space that is enclosed by and forms an opening in a seed coat at the apex of a seed and is the remnant of a micropyle. NMDCO_relaxed.owl PO:0025117 biolink:NamedThing plant anatomical space An anatomical space that is part of a plant. NMDCO_relaxed.owl PO:0008032 biolink:NamedThing stomatal pore A plant anatomical space that forms an opening in an epidermis, flanked by two guard cells. NMDCO_relaxed.owl PO:0020025 biolink:NamedThing plant ovule micropyle A plant anatomical space (PO:0025117) that is enclosed by and forms an opening in an integument at the apex of a plant ovule (PO:0020003). NMDCO_relaxed.owl PO:0020101 biolink:NamedThing stomium A plant anatomical space that is a slit in an anther lobe formed from when a dehiscence zone dehisces. NMDCO_relaxed.owl PO:0025118 biolink:NamedThing anther pore A plant anatomical space that is a pore at the apex of an anther. NMDCO_relaxed.owl PO:0025224 biolink:NamedThing axil A plant anatomical space that is the space between a shoot axis and a leaf, bract, or branch that branches from the shoot axis. NMDCO_relaxed.owl PO:0025263 biolink:NamedThing locule A plant anatomical space (PO:0025117) that is a cavity a reproductive structure. NMDCO_relaxed.owl PO:0025322 biolink:NamedThing hydathode pore A plant anatomical space that is an opening in a hydathode. NMDCO_relaxed.owl PO:0025379 biolink:NamedThing intercellular space A plant anatomical space that is part of a portion of plant tissue between two or more cells. NMDCO_relaxed.owl PO:0025383 biolink:NamedThing phyllome sinus A plant anatomical space that is a phyllome marginal embayment, incision or indentation between marginal projections of any sort, typically lobes, teeth, or the base of cordate phyllomes. NMDCO_relaxed.owl PO:0030017 biolink:NamedThing spore capsule mouth A plant anatomical space that is the opening on the apical end of a spore capsule. NMDCO_relaxed.owl PO:0006342 biolink:NamedThing infructescence A reproductive shoot system (PO:0025082) that develops from an inflorescence (PO:0009049) and has as parts each infructescence axis (PO:0025242) and all of the fruits (PO:0009001) borne by those axes. NMDCO_relaxed.owl PO:0009046 biolink:NamedThing flower A determinate reproductive shoot system (PO:0025082) that has as part at least one carpel (PO:0009030) or at least one stamen (PO:0009029) and does not contain any other determinate shoot system (PO:0009006) as a part. NMDCO_relaxed.owl PO:0009049 biolink:NamedThing inflorescence A reproductive shoot system (PO:0025082) that has as parts all of the shoot axes (PO:0025029) and flowers (PO:0009046; must have two or more) distal to the most distal leaf (PO:0009025). NMDCO_relaxed.owl PO:0025240 biolink:NamedThing second order inflorescence A reproductive shoot system (PO:0025082) that is part of an inflorescence (PO:0009049) and has as parts a second order inflorescence axis (PO:0006321) and any shoot axes (PO:0025029) and flowers (PO:0009046) that arise from it. NMDCO_relaxed.owl PO:0025241 biolink:NamedThing second order infructescence A reproductive shoot system that is part of an infructescence and has as parts a second order infructescence axis and any infructescence axes and fruits that arise from it. NMDCO_relaxed.owl PO:0025323 biolink:NamedThing flower fascicle A reproductive shoot system (PO:0025082) that is a second order inflorescence (PO:0025240), or higher, in which the inflorescence branch (PO:0009081) bears two or more flowers (PO:0009046), but is not elongated. NMDCO_relaxed.owl PO:0025282 biolink:NamedThing archegonium megagametophyte A megagametophyte (PO:0025279) that has as parts one or more archegonia (PO:0025126). NMDCO_relaxed.owl PO:0030034 biolink:NamedThing archegoniophore A stalk (PO:0025066) that supports an archegonium head (PO:0030034). NMDCO_relaxed.owl PO:0006346 biolink:NamedThing leaf intercalary meristem An intercalary meristem (PO:0006073) that is part of a leaf (PO:0006346) and is intercalated between two portions of non-meristematic tissue between a leaf apex (PO:0020137) and a leaf base (PO:0020040). NMDCO_relaxed.owl PO:0006347 biolink:NamedThing stem intercalary meristem An intercalary meristem (PO:0006073) that is part of a stem internode (PO:0020142) and is intercalated between two portions of non-meristematic tissue. NMDCO_relaxed.owl PO:0006348 biolink:NamedThing ear pedicellate spikelet An ear spikelet (PO:0006320) which is the ultimate, pedicellate, higher order inflorescence axis (PO:0009081) of the maize ear inflorescence (PO:0020136). NMDCO_relaxed.owl PO:0006349 biolink:NamedThing ear sessile spikelet An ear spikelet (PO:0006320) which is the ultimate, sessile, higher order inflorescence axis (PO:0009081) of the maize ear inflorescence (PO:0020136). NMDCO_relaxed.owl PO:0006350 biolink:NamedThing upper floret of pedicellate spikelet of ear An ear floret that is the upper of the two florets of a pedicellate spikelet rachilla of an ear inflorescence. NMDCO_relaxed.owl PO:0006351 biolink:NamedThing lower floret of sessile spikelet of ear An ear floret that is the lower of the two florets on a sessile spikelet of an ear inflorescence. NMDCO_relaxed.owl PO:0006352 biolink:NamedThing upper floret of sessile spikelet of ear An ear floret that is one of the two florets placed above the lower floret on a sessile spikelet rachilla of an ear inflorescence. NMDCO_relaxed.owl PO:0006353 biolink:NamedThing lower floret of pedicellate spikelet of ear An ear floret that is the lower of the two florets of a pedicellate spikelet rachilla of an ear inflorescence. NMDCO_relaxed.owl PO:0025599 biolink:NamedThing pistillate flower A flower (PO:0009046) that includes as part a single carpel (PO:0009030) or a gynoecium (PO:0009062), but the androecium (PO:0009061) is absent or has aborted during development. NMDCO_relaxed.owl PO:0025331 biolink:NamedThing ray flower A small pistillate flower (PO:0025599) on the margin of a head-type (capitulum) inflorescence (PO:0009049). NMDCO_relaxed.owl PO:0006358 biolink:NamedThing tassel spikelet pair meristem The meristem present on short tassel branch that produces two spikelet meristems, each of which produces two floral meristems in a maize tassel. NMDCO_relaxed.owl PO:0006360 biolink:NamedThing ear spikelet pair meristem An ear inflorescence axillary meristem (PO:0009110) that produces two ear spikelet meristems (PO:0006378), each of which produces two flower meristems (PO:0000229) in an ear inflorescence (PO:0020136). NMDCO_relaxed.owl PO:0009107 biolink:NamedThing tassel inflorescence axillary meristem An inflorescence axillary meristem (PO:0009105) that gives rise to the long lateral tassel branch (PO:0009101), short tassel branch (PO:0009102), and tassel spikelets (PO:0006309) in a tassel inflorescence (PO:0020126). NMDCO_relaxed.owl PO:0009103 biolink:NamedThing short tassel branch meristem The meristem present on either or both the long lateral branch and central spike of a maize tassel that gives rise to short tassel branch. NMDCO_relaxed.owl PO:0009104 biolink:NamedThing long lateral tassel branch meristem The meristem that gives rise to the long lateral branch in the maize tassel. NMDCO_relaxed.owl PO:0009110 biolink:NamedThing ear inflorescence axillary meristem An inflorescence axillary meristem (PO:0009105) that gives rise to a higher order inflorescence axis (PO:0009081) of an ear inflorescence (PO:0020136). NMDCO_relaxed.owl PO:0008016 biolink:NamedThing vegetative shoot apical meristem A shoot apical meristem (PO:0020148) that gives rise to the apical growth of vegetative tissues and organs. NMDCO_relaxed.owl PO:0006369 biolink:NamedThing lower glume of ear spikelet A lower glume that is part of an ear spikelet. NMDCO_relaxed.owl PO:0006372 biolink:NamedThing lower glume of tassel spikelet A lower glume that is part of a tassel spikelet. NMDCO_relaxed.owl PO:0006371 biolink:NamedThing upper glume of ear spikelet An upper glume that is part of an ear spikelet. NMDCO_relaxed.owl PO:0006370 biolink:NamedThing upper glume of tassel spikelet An upper glume that is part of a tassel spikelet. NMDCO_relaxed.owl PO:0009109 biolink:NamedThing ear meristem The meristem which gives rise to the female inflorescence or ear in maize. NMDCO_relaxed.owl PO:0009106 biolink:NamedThing tassel meristem Meristem that gives rise to the apical and lateral structures of the tassel inflorescence in maize. NMDCO_relaxed.owl PO:0006379 biolink:NamedThing tassel spikelet rachilla The axis of the tassel spikelet, above the glumes. NMDCO_relaxed.owl PO:0009101 biolink:NamedThing long lateral tassel branch The long branch that arise from the central spike of tassel in maize. NMDCO_relaxed.owl PO:0009102 biolink:NamedThing short tassel branch The very short branch that may arise from either or both the long lateral branch and the central spike of tassel in maize. NMDCO_relaxed.owl PO:0006380 biolink:NamedThing ear spikelet rachilla The axis of the ear spikelet, above the glumes. NMDCO_relaxed.owl PO:0006385 biolink:NamedThing lower glume of pedicellate spikelet of tassel A lower glume of tassel spikelet that is part of a tassel pedicellate spikelet. NMDCO_relaxed.owl PO:0006386 biolink:NamedThing lower glume of sessile spikelet of tassel A lower glume of tassel spikelet that is part of a tassel sessile spikelet. NMDCO_relaxed.owl PO:0006387 biolink:NamedThing upper glume of sessile spikelet of tassel An upper glume of tassel spikelet that is part of a tassel sessile spikelet. NMDCO_relaxed.owl PO:0006388 biolink:NamedThing upper glume of pedicellate spikelet of tassel An upper glume of tassel spikelet that is part of a tassel pedicellate spikelet. NMDCO_relaxed.owl PO:0006389 biolink:NamedThing rachilla of sessile spikelet of tassel The axis of the tassel sessile spikelet, above the glumes. NMDCO_relaxed.owl PO:0006390 biolink:NamedThing rachilla of pedicellate spikelet of tassel The axis of the tassel pedicellate spikelet, above the glumes. NMDCO_relaxed.owl PO:0006415 biolink:NamedThing pedicel of ear spikelet This is the ultimate branch of the pedicellate ear spikelet. NMDCO_relaxed.owl PO:0006416 biolink:NamedThing pedicel of tassel spikelet This is the ultimate branch of the pedicellate tassel spikelet. NMDCO_relaxed.owl PO:0006417 biolink:NamedThing tassel peduncle A peduncle of a maize tassel, below the lowest tassel node. NMDCO_relaxed.owl PO:0006418 biolink:NamedThing ear peduncle A peduncle of a maize ear, below the lowest ear node. NMDCO_relaxed.owl PO:0006435 biolink:NamedThing rachilla of pedicellate spikelet of ear The axis of the ear pedicellate spikelet, above the glumes. NMDCO_relaxed.owl PO:0006436 biolink:NamedThing rachilla of sessile spikelet of ear The axis of the ear sessile spikelet, above the glumes. NMDCO_relaxed.owl PO:0006437 biolink:NamedThing lower glume of pedicellate spikelet of ear A lower glume of ear spikelet that is part of an ear pedicellate spikelet. NMDCO_relaxed.owl PO:0006438 biolink:NamedThing lower glume of sessile spikelet of ear A lower glume of ear spikelet that is part of an ear sessile spikelet. NMDCO_relaxed.owl PO:0006439 biolink:NamedThing upper glume of pedicellate spikelet of ear An upper glume of ear spikelet that is part of an ear pedicellate spikelet. NMDCO_relaxed.owl PO:0006440 biolink:NamedThing upper glume of sessile spikelet of ear An upper glume of ear spikelet that is part of an ear sessile spikelet. NMDCO_relaxed.owl PO:0006501 biolink:NamedThing leaf abscission zone An abscission zone (PO:0000146) at the base of a vascular leaf (PO:0009025) where it separates during leaf abscission (GO:0060866). NMDCO_relaxed.owl PO:0006502 biolink:NamedThing floral organ abscission zone An abscission zone (PO:0000146) at the base of a flower (PO:0009001) where a floral organ (PO:0025395) separates during floral organ abscission (GO:0010227). NMDCO_relaxed.owl PO:0006503 biolink:NamedThing fruit abscission zone An abscission zone (PO:0000146) at the base of a fruit (PO:0009001) where the fruit separates from a fruit pedicel (PO:0030114) during fruit abscission (GO:0060867). NMDCO_relaxed.owl PO:0025605 biolink:NamedThing fruit pedicel abscission zone An abscission zone (PO:0000146) that forms as a swelling or joint on a fruit pedicel (PO:0030114). NMDCO_relaxed.owl PO:0025608 biolink:NamedThing flower pedicel abscission zone An abscission zone (PO:0000146) that forms as a swelling or joint on a flower pedicel (PO:0030113). NMDCO_relaxed.owl PO:0006504 biolink:NamedThing leaf trichome A phyllome trichome that is part of a leaf epidermis. NMDCO_relaxed.owl PO:0025098 biolink:NamedThing bract trichome A phyllome trichome that is part of a bract epidermis. NMDCO_relaxed.owl PO:0025182 biolink:NamedThing sepal trichome A phyllome trichome that is part of a sepal epidermis. NMDCO_relaxed.owl PO:0025187 biolink:NamedThing petal trichome A phyllome trichome that is part of a petal epidermis. NMDCO_relaxed.owl PO:0025188 biolink:NamedThing tepal trichome A phyllome trichome that is part of a tepal epidermis. NMDCO_relaxed.owl PO:0025208 biolink:NamedThing carpel trichome A phyllome trichome (PO:0025186) that is part of a carpel epidermis (PO:0025096). NMDCO_relaxed.owl PO:0025209 biolink:NamedThing stamen trichome A phyllome trichome that is part of a stamen epidermis. NMDCO_relaxed.owl PO:0007001 biolink:NamedThing early whole plant fruit ripening stage The early stage in fruit ripening. NMDCO_relaxed.owl PO:0007010 biolink:NamedThing whole plant fruit ripening stage A whole plant fruit development stage (PO:0025500) that begins when the first fruit (PO:0009001) on a whole plant (PO:0000003) begins the process of ripening (GO:0009835) in a way which, in case there are other fruits, the majority of the other fruits start to ripen continuously therewith, and ends with earliest of the following: (1) the whole plant begins a sporophyte senescent stage (PO:0007017), (2) the whole plant begins a sporophyte dormant stage (PO:0007132), or (3) all fruits on the whole plant are finished ripening. NMDCO_relaxed.owl PO:0007031 biolink:NamedThing mid whole plant fruit ripening stage The stage when fruit ripening is midway. NMDCO_relaxed.owl PO:0007036 biolink:NamedThing beginning of whole plant fruit ripening stage The stage at which fruit maturation begins. NMDCO_relaxed.owl PO:0007038 biolink:NamedThing whole plant fruit ripening complete stage The stage at which fruit ripening is complete. NMDCO_relaxed.owl PO:0007050 biolink:NamedThing late whole plant fruit ripening stage The late stage of fruit ripening. NMDCO_relaxed.owl PO:0007002 biolink:NamedThing IE.03 3/4 of inflorescence emerged from flag leaf sheath stage The stage at which 3/4 of inflorescence has emerged from flag leaf sheath. NMDCO_relaxed.owl PO:0007041 biolink:NamedThing inflorescence emergence stage An inflorescence detectable phase during which an inflorescence emerges from sheathing leaves or bracts. NMDCO_relaxed.owl PO:0007008 biolink:NamedThing IE.02 1/2 of inflorescence emerged from flag leaf sheath stage The stage at which 1/2 of inflorescence has emerged from flag leaf sheath. NMDCO_relaxed.owl PO:0007023 biolink:NamedThing IE.04 inflorescence fully emerged from flag leaf sheath stage The stage at which the inflorescence has fully emerged from the flag leaf sheath. NMDCO_relaxed.owl PO:0007025 biolink:NamedThing IE.00 inflorescence tip just visible above flag leaf sheath stage The stage at which the inflorescence tip is just visible above flag leaf sheath. NMDCO_relaxed.owl PO:0007048 biolink:NamedThing IE.01 1/4 of inflorescence emerged from flag leaf sheath stage The stage at which 1/4 of inflorescence has emerged from flag leaf sheath. NMDCO_relaxed.owl PO:0007003 biolink:NamedThing IL.03 full inflorescence length reached stage An inflorescence detectable phase during which an inflorescence has reached at its full length. NMDCO_relaxed.owl PO:0007047 biolink:NamedThing whole plant inflorescence detectable stage A reproductive growth stage during which an inflorescence is detectable. NMDCO_relaxed.owl PO:0007005 biolink:NamedThing IL.02 1/2 inflorescence length reached stage An inflorescence detectable phase during which an inflorescence has reached at least one half of its full length, but has not yet reached its full length. NMDCO_relaxed.owl PO:0007006 biolink:NamedThing IL.00 inflorescence just visible stage An inflorescence detectable phase during which an inflorescence is just visible, but has not yet reach one quarter of its full length. NMDCO_relaxed.owl PO:0007046 biolink:NamedThing IL.01 1/4 inflorescence length reached stage An inflorescence detectable phase during which an inflorescence has reached at least one quarter of its full length, but has not yet reached one half of its full length. NMDCO_relaxed.owl PO:0007007 biolink:NamedThing whole plant fruit formation stage 50 to 70% A whole plant fruit formation stage (PO:0007042) that spans the interval when the average size of fruits (PO:0009001) on a whole plant (PO:0000003) has reached 50% to 70% of its final size. NMDCO_relaxed.owl PO:0007042 biolink:NamedThing whole plant fruit formation stage A whole plant fruit development stage (PO:0025500) that begins when a fruit (PO:0009001) on a whole plant (PO:0000003) that is not currently participating in a whole plant fruit development stage begins a fruit initiation stage (PO:0025503) and ends with the onset of a whole plant fruit ripening stage (PO:0007010). NMDCO_relaxed.owl PO:0007009 biolink:NamedThing whole plant fruit formation stage 10 to 30% A whole plant fruit formation stage (PO:0007042) that spans the interval when the average size of fruits (PO:0009001) on a whole plant (PO:0000003) has reached 10% to 30% of final size. NMDCO_relaxed.owl PO:0007027 biolink:NamedThing whole plant fruit formation stage 70% to final size A whole plant fruit formation stage (PO:0007042) that spans the interval when the average size of fruits (PO:0009001) on a whole plant (PO:0000003) has reached 70% of its final size to its final size. NMDCO_relaxed.owl PO:0007029 biolink:NamedThing whole plant fruit formation stage 30 to 50% A whole plant fruit formation stage (PO:0007042) that spans the interval when the average size of fruits (PO:0009001) on a whole plant (PO:0000003) has reached 30% to 50% of its final size. NMDCO_relaxed.owl PO:0007032 biolink:NamedThing whole plant fruit formation stage up to 10% A whole plant fruit formation stage (PO:0007042) that begins when the first fruit (PO:0009001) on a whole plant (PO:0000003) that has no other fruits as part enters a fruit initiation stage (PO:0025503) and ends when the average size of fruits (PO:0009001) on a whole plant (PO:0000003) has reached 10% of final size. NMDCO_relaxed.owl PO:0025500 biolink:NamedThing whole plant fruit development stage A sporophyte reproductive stage that begins when a fruit (PO:0009001) on a whole plant (PO:0000003) that is not currently participating in a whole plant fruit development stage begins a fruit initiation stage (PO:0025503), and ends with the earliest of the following: (1) the whole plant begins a sporophyte senescent stage (PO:0007017), (2) the whole plant begins a sporophyte dormant stage (PO:0007132), or (3) all fruits on the whole plant are finished ripening. NMDCO_relaxed.owl PO:0007013 biolink:NamedThing BO.03 late boot stage The flag leaf sheath swollen. NMDCO_relaxed.owl PO:0007014 biolink:NamedThing booting stage An inflorescence detectable phase characterized by a swelling of the flag leaf sheath, caused by an increase in the size of the inflorescence as it grows up the leaf sheath. NMDCO_relaxed.owl PO:0007018 biolink:NamedThing BO.01 early boot stage The flag leaf sheath has started to extend. NMDCO_relaxed.owl PO:0007019 biolink:NamedThing BO.05 flag leaf sheath opened stage The first awns are visible and the flag leaf sheath has opened. NMDCO_relaxed.owl PO:0007028 biolink:NamedThing BO.04 flag leaf sheath opening stage The flag leaf sheath starts opening. NMDCO_relaxed.owl PO:0007044 biolink:NamedThing BO.02 mid boot stage The flag leaf sheath is just visibly swollen. NMDCO_relaxed.owl PO:0007051 biolink:NamedThing BO.00 booting begins stage Booting has just begun. NMDCO_relaxed.owl PO:0007016 biolink:NamedThing whole plant flowering stage A sporophyte reproductive stage (PO:0007130) during which a flower (PO:0009046) on a whole plant (PO:0000003) is open. NMDCO_relaxed.owl PO:0007022 biolink:NamedThing seed imbibition stage A seed germination stage (PO:0007057) during which there is absorption of water by the seed (PO:0009010). NMDCO_relaxed.owl PO:0007057 biolink:NamedThing seed germination stage A sporophyte vegetative stage (PO:0007134) which begins with the onset of a seed imbibition stage (PO:0007022) and ends with a radicle emergence stage (PO: 0007015), or a coleorhiza emergence stage (PO:0025475), as a result of the growth by the plant embryo (PO:0004537) in a seed (PO:0009010). NMDCO_relaxed.owl PO:0007024 biolink:NamedThing FL.04 end of flowering stage The stage at which flowering is complete. NMDCO_relaxed.owl PO:0007026 biolink:NamedThing FL.00 first flower(s) open stage The stage at which the first flower(s) open. NMDCO_relaxed.owl PO:0007034 biolink:NamedThing FL.01 1/4 of flowers open stage The stage at which 1/4 of flowers open. NMDCO_relaxed.owl PO:0007052 biolink:NamedThing FL.03 3/4 of flowers open stage The stage at which 3/4 of flowers open. NMDCO_relaxed.owl PO:0007053 biolink:NamedThing FL.02 1/2 of flowers open stage The stage at which 1/2 of flowers open. NMDCO_relaxed.owl PO:0007030 biolink:NamedThing seedling shoot emergence stage Shoot or leaf breaks through soil surface. NMDCO_relaxed.owl PO:0007131 biolink:NamedThing seedling development stage A sporophyte vegetative stage (PO:0007134) that succeeds the seed germination stage (PO:0007057) and terminates with the development of the first adult vascular leaf (PO:0006340). NMDCO_relaxed.owl PO:0007043 biolink:NamedThing hypocotyl emergence stage A seedling development stage (PO:0007131) during which the hypocotyl (PO:0020100) emerges from the seed coat (PO:0009088). NMDCO_relaxed.owl PO:0007049 biolink:NamedThing cotyledon emergence stage A seedling development stage (PO:0007131) during which the cotyledon (PO:0020030) emerges from the seed coat (PO:0009088). NMDCO_relaxed.owl PO:0007054 biolink:NamedThing epicotyl emergence stage A seedling development stage (PO:0007131) during which the epicotyl (PO:0020035) emerges from the seed coat (PO:0009088). NMDCO_relaxed.owl PO:0007033 biolink:NamedThing whole plant development stage A plant structure development stage (PO:0009012) that has as primary participant a whole plant (PO:0000003). NMDCO_relaxed.owl PO:0025338 biolink:NamedThing collective plant organ structure development stage A plant structure development stage (PO:0009012) that has as primary participant a collective plant structure (PO:0025497). NMDCO_relaxed.owl PO:0025368 biolink:NamedThing trichome development stage A plant structure development stage (PO:0009012) that has as primary participant a trichome (PO:0000282). NMDCO_relaxed.owl PO:0025423 biolink:NamedThing plant tissue development stage A plant structure development stage (PO:0009012) that has as primary participant a portion of plant tissue (PO:0009007). NMDCO_relaxed.owl PO:0007037 biolink:NamedThing inflorescence bifurcation stage Stage of inflorescence development marked by the formation of two, often equal-sized, inflorescence meristems from one inflorescence meristem. NMDCO_relaxed.owl PO:0021004 biolink:NamedThing inflorescence initiation stage Stage of inflorescence development marked by the formation of the inflorescence meristem on a vegetative branch. NMDCO_relaxed.owl PO:0007039 biolink:NamedThing leaf trichome development stage A trichome development stage that has as primary participant a leaf trichome. NMDCO_relaxed.owl PO:0025369 biolink:NamedThing seed trichome development stage A trichome development stage that has as primary participant a seed trichome. NMDCO_relaxed.owl PO:0007045 biolink:NamedThing coleoptile emergence stage A sporophyte vegetative stage (PO:0007134) during which the coleoptile (PO:0020033) emerges from the seed coat (PO:0009088). NMDCO_relaxed.owl PO:0007073 biolink:NamedThing 2 formation of axillary shoot stage The stage at which the axillary shoots are forming. NMDCO_relaxed.owl PO:0007112 biolink:NamedThing 1 main shoot growth stage The stage at which vegetative structures are being produced by SAM. NMDCO_relaxed.owl PO:0007056 biolink:NamedThing 1 pattern formation stage Trichome initiation stage that determine numbers of trichome are formed. NMDCO_relaxed.owl PO:0007058 biolink:NamedThing 2 endoreduplication stage The stage trichome nuclei continue to replicate their DNA after mitosis and cytokinesis have ceased, and as a consequence have a DNA content much greater than 2C. NMDCO_relaxed.owl PO:0007059 biolink:NamedThing 3 branch formation stage The stage trichome develops branches. NMDCO_relaxed.owl PO:0007135 biolink:NamedThing 4 growth directionality stage The stage involved in the directionality of expansion growth. NMDCO_relaxed.owl PO:0007062 biolink:NamedThing SE.06 six nodes or internodes visible stage The stage at which six nodes or six internodes are visible. NMDCO_relaxed.owl PO:0007089 biolink:NamedThing stem elongation stage The stage at which the internodes elongate. NMDCO_relaxed.owl PO:0007066 biolink:NamedThing SE.09 nine nodes or internodes visible stage The stage at which nine nodes or nine internodes are visible. NMDCO_relaxed.owl PO:0007070 biolink:NamedThing SE.08 eight nodes or internodes visible stage The stage at which eight nodes or eight internodes are visible. NMDCO_relaxed.owl PO:0007074 biolink:NamedThing SE.15 fifteen nodes or internodes visible stage The stage at which fifteen nodes or fifteen internodes are visible. NMDCO_relaxed.owl PO:0007079 biolink:NamedThing SE.00 stem elongation begins stage The stage at which the internodes begin to elongate. NMDCO_relaxed.owl PO:0007084 biolink:NamedThing SE.10 ten nodes or internodes visible stage The stage at which ten nodes or ten internodes are visible. NMDCO_relaxed.owl PO:0007086 biolink:NamedThing SE.05 five nodes or internodes visible stage The stage at which five nodes or five internodes are visible. NMDCO_relaxed.owl PO:0007090 biolink:NamedThing SE.13 thirteen nodes or internodes visible stage The stage at which thirteen nodes or thirteen internodes are visible. NMDCO_relaxed.owl PO:0007091 biolink:NamedThing SE.01 one node or internode visible stage The stage at which one node or one internode is visible. NMDCO_relaxed.owl PO:0007092 biolink:NamedThing SE.04 four nodes or internodes visible stage The stage at which four nodes or four internodes are visible. NMDCO_relaxed.owl PO:0007096 biolink:NamedThing SE.03 three nodes or internodes visible stage The stage at which three nodes or three internodes are visible. NMDCO_relaxed.owl PO:0007097 biolink:NamedThing SE.14 fourteen nodes or internodes visible stage The stage at which fourteen nodes or fourteen internodes are visible. NMDCO_relaxed.owl PO:0007099 biolink:NamedThing SE.97 flag leaf visible stage The stage at which the flag leaf is visible. NMDCO_relaxed.owl PO:0007100 biolink:NamedThing SE.16 sixteen or more nodes or internodes visible stage The stage at which sixteen nodes or more, or sixteen internodes or more are visible. NMDCO_relaxed.owl PO:0007108 biolink:NamedThing SE.07 seven nodes or internodes visible stage The stage at which seven nodes or seven internodes are visible. NMDCO_relaxed.owl PO:0007109 biolink:NamedThing SE.99 maximum stem length reached stage The stage at which maximum stem length is reached. NMDCO_relaxed.owl PO:0007111 biolink:NamedThing SE.12 twelve nodes or internodes visible stage The stage at which twelve nodes or twelve internodes are visible. NMDCO_relaxed.owl PO:0007114 biolink:NamedThing SE.11 eleven nodes or internodes visible stage The stage at which eleven nodes or eleven internodes are visible. NMDCO_relaxed.owl PO:0007117 biolink:NamedThing SE.02 two nodes or internodes visible stage The stage at which two nodes or two internodes are visible. NMDCO_relaxed.owl PO:0007063 biolink:NamedThing LP.07 seven leaves visible stage The stage at which leaves at seven nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007133 biolink:NamedThing leaf production stage The stage at which the leaves produced by SAM are visible above the ground in a seedling or mature plant. NMDCO_relaxed.owl PO:0007064 biolink:NamedThing LP.12 twelve leaves visible stage The stage at which leaves at twelve nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007065 biolink:NamedThing LP.05 five leaves visible stage The stage at which leaves at five nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007067 biolink:NamedThing LP.17 seventeen leaves visible stage The stage at which leaves at seventeen nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007072 biolink:NamedThing LP.18 eighteen leaves visible stage The stage at which leaves at eighteen nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007082 biolink:NamedThing LP.20 twenty or more leaves whorls visible stage The stage at which leaves at twenty or more nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007083 biolink:NamedThing LP.13 thirteen leaves visible stage The stage at which leaves at thirteen nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007085 biolink:NamedThing LP.14 fourteen leaves visible stage The stage at which leaves at fourteen nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007094 biolink:NamedThing LP.01 one leaf visible stage The stage at which leaves at one node, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007095 biolink:NamedThing LP.08 eight leaves visible stage The stage at which leaves at eight nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007098 biolink:NamedThing LP.02 two leaves visible stage The stage at which leaves at two nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007101 biolink:NamedThing LP.09 nine leaves visible stage The stage at which leaves at nine nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007103 biolink:NamedThing LP.10 ten leaves visible stage The stage at which leaves at ten nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007104 biolink:NamedThing LP.15 fifteen leaves visible stage The stage at which leaves at fifteen nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007106 biolink:NamedThing LP.03 three leaves visible stage The stage at which leaves at three nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007115 biolink:NamedThing LP.04 four leaves visible stage The stage at which leaves at four nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007116 biolink:NamedThing LP.11 eleven leaves visible stage The stage at which leaves at eleven nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007119 biolink:NamedThing LP.16 sixteen leaves visible stage The stage at which leaves at sixteen nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007120 biolink:NamedThing LP.19 nineteen leaves visible stage The stage at which leaves at nineteen nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007123 biolink:NamedThing LP.06 six leaves visible stage The stage at which leaves at six nodes, other than the cotyledonary node, are visible above ground. NMDCO_relaxed.owl PO:0007068 biolink:NamedThing mid rosette growth stage Rosette has reached approximately 50% of its final diameter. NMDCO_relaxed.owl PO:0007113 biolink:NamedThing rosette growth stage Stages of growth based on expansion of the rosette in Arabidopsis. NMDCO_relaxed.owl PO:0007076 biolink:NamedThing late rosette growth stage Rosette has reached approximately 70% of its final diameter. NMDCO_relaxed.owl PO:0007078 biolink:NamedThing rosette growth complete stage Stage at which rosette no longer increases in diameter, its leaf growth and expansion having ceased. NMDCO_relaxed.owl PO:0007081 biolink:NamedThing early rosette growth stage Rosette has reached approximately 20% of its final diameter. NMDCO_relaxed.owl PO:0007071 biolink:NamedThing 2.02 main shoot and axillary shoots visible at two nodes stage The stage at which main shoot and axillary shoots at two nodes are visible. NMDCO_relaxed.owl PO:0007077 biolink:NamedThing 2.08 main shoot and axillary shoots visible at eight nodes stage The stage at which main shoot and axillary shoots at eight nodes are visible. NMDCO_relaxed.owl PO:0007080 biolink:NamedThing 2.03 main shoot and axillary shoots visible at three nodes stage The stage at which main shoot and axillary shoots at three nodes are visible. NMDCO_relaxed.owl PO:0007087 biolink:NamedThing 2.01 main shoot and axillary shoots visible at one node stage The stage at which main shoot and axillary shoot(s) at one node is (are) visible. NMDCO_relaxed.owl PO:0007088 biolink:NamedThing 2.04 main shoot and axillary shoots visible at four nodes stage The stage at which main shoot and axillary shoots at four nodes are visible. NMDCO_relaxed.owl PO:0007093 biolink:NamedThing 2.05 main shoot and axillary shoots visible at five nodes stage The stage at which main shoot and axillary shoots at five nodes are visible. NMDCO_relaxed.owl PO:0007110 biolink:NamedThing 2.09 main shoot and axillary shoots visible at nine or more nodes stage The stage at which main shoot and axillary shoots at nine nodes or more are visible. NMDCO_relaxed.owl PO:0007118 biolink:NamedThing 2.06 main shoot and axillary shoots visible at six nodes stage The stage at which main shoot and axillary shoots at six nodes are visible. NMDCO_relaxed.owl PO:0007122 biolink:NamedThing 2.07 main shoot and axillary shoots visible at seven nodes stage The stage at which main shoot and axillary shoots at seven nodes are visible. NMDCO_relaxed.owl PO:0007501 biolink:NamedThing root cap formation stage The stage at which the root cap becomes evident. NMDCO_relaxed.owl PO:0007509 biolink:NamedThing root vascular cylinder differentiation stage The stage at which the root vascular cylinder becomes evident. NMDCO_relaxed.owl PO:0007513 biolink:NamedThing root cortex differentiation stage The stage at which the root cortex becomes evident. NMDCO_relaxed.owl PO:0007516 biolink:NamedThing root epidermal differentiation stage The stage at which the root epidermis becomes evident. NMDCO_relaxed.owl PO:0007504 biolink:NamedThing crown root primordium formation stage The stage at which the initial cells of crown root primordium are formed in the innermost ground meristem cells by one or two periclinal divisions. NMDCO_relaxed.owl PO:0007506 biolink:NamedThing primary root primordium formation stage The stage at which a group of cells or initials that will differentiate into the primary root become organized in the embryo . NMDCO_relaxed.owl PO:0007511 biolink:NamedThing lateral root primordium formation stage This stage at which the transverse divisions in pericycle cells form the initials of the lateral root primordium. NMDCO_relaxed.owl PO:0007510 biolink:NamedThing root emergence stage The stage at which the fully formed root emerges. NMDCO_relaxed.owl PO:0007517 biolink:NamedThing lateral root emergence stage The stage at which the lateral root emerges. NMDCO_relaxed.owl PO:0007518 biolink:NamedThing crown root emergence stage The stage at which the crown root emerges. NMDCO_relaxed.owl PO:0025585 biolink:NamedThing floral organ formation stage A flower development stage (PO:0007615) that occurs in an individual flower (PO:000904) during the interval between the onset of a floral organ meristem development stage (PO:0007601) and the onset of a flowering stage (PO:0007616). NMDCO_relaxed.owl PO:0007600 biolink:NamedThing floral organ differentiation stage A floral organ formation stage (PO:0025585) which begins with the differentiation of floral organs (PO:0025395) from the floral organ primordium (PO:0025477) and ends with the beginning of the flowering stage (PO:0007616). NMDCO_relaxed.owl PO:0007601 biolink:NamedThing floral organ meristem development stage A floral organ formation stage (PO:0025585) which begins with the development of the floral organ meristem (PO:0000229) from a portion of meristem tissue (PO:0009013) and ends with the beginning of the floral organ primordium development stage (PO:0007602). NMDCO_relaxed.owl PO:0007602 biolink:NamedThing floral organ primordium development stage A floral organ formation stage (PO:0025585) which begins with the appearance of the floral organ primordium (PO:0025477) and ends with the beginning of the floral organ differentiation stage (PO:0007600). NMDCO_relaxed.owl PO:0025578 biolink:NamedThing collective phyllome structure development stage A collective plant organ stucture development stage (PO:0025338) that has as primary participant collective phyllome structure (PO:0025023). NMDCO_relaxed.owl PO:0007604 biolink:NamedThing corolla development stage A collective phyllome structure development stage (PO:0025578) that has as a primary participant a corolla (PO:0009059). NMDCO_relaxed.owl PO:0007608 biolink:NamedThing petal primordium visible stage Stage of corolla development that begins when the petal or petal-stamen primordia arise. NMDCO_relaxed.owl PO:0007611 biolink:NamedThing petal differentiation and expansion stage Stage of corolla development defined by differentiation and expansion of petal. NMDCO_relaxed.owl PO:0007612 biolink:NamedThing fully expanded petal stage Stage of corolla development when petal is fully expanded. NMDCO_relaxed.owl PO:0007616 biolink:NamedThing flowering stage A flower development stage (PO:0007615) that begins when pollen (PO:0025281) is released by anther dehiscence (GO:0009901) and/or the stigma (PO:0009073) is receptive and ends with the process of pollination (GO:0009856) and/or floral organ senescence (GO:0080187). NMDCO_relaxed.owl PO:0025588 biolink:NamedThing flower meristem transition stage A flower development stage (PO:0007615) which begins with the transition of a portion of meristem tissue (PO:0009013) to a flower meristem (PO:0000229) and ends with the onset of the floral organ formation stage (PO:0025585). NMDCO_relaxed.owl PO:0007621 biolink:NamedThing megagametophyte development stage A gametophyte development stage (PO:0028003) during which the megagametophyte (PO:0025279) develops. NMDCO_relaxed.owl PO:0028003 biolink:NamedThing gametophyte development stage A whole plant development stage (PO:0007033) that has as primary participant a whole plant (PO:0000003) during the interval between meiosis or apospory and the time that the whole plant ceases to exist. NMDCO_relaxed.owl PO:0025340 biolink:NamedThing gametophyte vegetative stage A gametophyte development stage (PO:0028003) that occurs during the interval between spore germination and the formation of a gametangium. NMDCO_relaxed.owl PO:0025341 biolink:NamedThing gametophyte reproductive stage A gametophyte development stage (PO:0028003) that occurs during the interval between the initiation of either a multicellular plant gametangium (PO:0025124) or a unicellular plant gametangium (PO:0025521) and the onset of senescence. NMDCO_relaxed.owl PO:0025342 biolink:NamedThing gametophyte dormant stage A gametophyte development stage (PO:0028003) during which a gametophyte participates in a dormancy process. NMDCO_relaxed.owl PO:0025343 biolink:NamedThing gametophyte senescent stage A gametophyte development stage (PO:0028003) during which a gametophyte participates in multicellular organism senescence. NMDCO_relaxed.owl PO:0025375 biolink:NamedThing plant spore stage A gametophyte development stage (PO:0028003) that occurs during the interval between meiosis and the germination of a spore. NMDCO_relaxed.owl PO:0007622 biolink:NamedThing integument initiation stage Stage of ovule development that begins when the integument primordia are visible. NMDCO_relaxed.owl PO:0007623 biolink:NamedThing A megaspore mother cell enlarges stage The stage of megagametophyte development when the megaspore mother cell enlarges. NMDCO_relaxed.owl PO:0007624 biolink:NamedThing B meiosis of megaspore mother cell stage The stage of megagametophyte development when the megaspore mother cell undergoes meiosis. NMDCO_relaxed.owl PO:0007625 biolink:NamedThing C tetrad of megaspores stage The product of meiosis of the megaspore mother cell. NMDCO_relaxed.owl PO:0007626 biolink:NamedThing D megaspore degeneration stage The stage of megagametophyte development when non-functional megaspores degenerate. NMDCO_relaxed.owl PO:0007627 biolink:NamedThing E two nucleate megagametophyte stage The stage of megagametophyte development when there are two nuclei. NMDCO_relaxed.owl PO:0007628 biolink:NamedThing F four nucleate megagametophyte stage The stage of megagametophyte development when there are four nuclei. NMDCO_relaxed.owl PO:0007629 biolink:NamedThing G eight nucleate megagametophyte stage The stage of megagametophyte development when there are eight nuclei. NMDCO_relaxed.owl PO:0008005 biolink:NamedThing fruit nucellus A nucellus that is part of a fruit. NMDCO_relaxed.owl PO:0020020 biolink:NamedThing nucellus A megasporangium (PO:0025201) in a seed plant, composed of fleshy subepidermal tissue that is part of a plant ovule (PO:0020003) and surrounds a megasporocyte (PO:0000431). NMDCO_relaxed.owl PO:0008006 biolink:NamedThing nucellar epidermis A megasporangium exothecium (PO:0025312) that is the morphologically distinct outer layer of the nucellus (PO:0020020). NMDCO_relaxed.owl PO:0025312 biolink:NamedThing megasporangium exothecium A portion of exothecium (PO:0030073) that is part of a megasporangium wall (PO:0025308). NMDCO_relaxed.owl PO:0008008 biolink:NamedThing modified aleurone A portion of aleurone layer (PO:0005360) which is morphologically distinct and is located adjacent to the nucellar projection (PO:0008007). NMDCO_relaxed.owl PO:0008017 biolink:NamedThing leaf sheath pulvinus A more or less abrupt swelling, especially at the apex or base of a leaf sheath. NMDCO_relaxed.owl PO:0009017 biolink:NamedThing inflorescence branch pulvinus A pulvinus (PO:0009000) of an inflorescence branch (PO:0009081). NMDCO_relaxed.owl PO:0009111 biolink:NamedThing petiole pulvinus Pulvinus of the petiole. NMDCO_relaxed.owl PO:0008021 biolink:NamedThing tertiary leaf vein A leaf lamina vein (PO:0020138) arising from a secondary leaf vein (PO:0020140). NMDCO_relaxed.owl PO:0020138 biolink:NamedThing leaf lamina vein A phyllome lamina vein (PO:0025348) that is part of a leaf lamina vascular system (PO:0000048). NMDCO_relaxed.owl PO:0008022 biolink:NamedThing quaternary leaf vein A leaf lamina vein (PO:0020138) arising from a tertiary leaf vein (PO:0008021). NMDCO_relaxed.owl PO:0008023 biolink:NamedThing higher order leaf vein A leaf lamina vein (PO:0020138) arising from a quaternary (PO:0008022) or other higher order leaf vein. NMDCO_relaxed.owl PO:0025390 biolink:NamedThing free ending veinlet A leaf lamina vein (PO:0020138) above the first order that is connected to another vein only at one end. NMDCO_relaxed.owl PO:0025413 biolink:NamedThing primary leaf vein A leaf lamina vein (PO:0020138) that connects directly to a petiole vascular system (PO:0000052) or a shoot axis vascular system (PO:0000039). NMDCO_relaxed.owl PO:0025520 biolink:NamedThing leaf lamina intramarginal vein A leaf lamina vein (PO:0020138) that is just inside the leaf lamina margin (PO:0025009) and extends from the leaf lamina base (PO:0008019) to the leaf apex (PO:0020137). NMDCO_relaxed.owl PO:0008027 biolink:NamedThing petiole adaxial epidermis A portion of petiole epidermis (PO:0000051) that covers the adaxial/upper surface of a petiole (PO:0020038). NMDCO_relaxed.owl PO:0008029 biolink:NamedThing petiole abaxial epidermis A portion of petiole epidermis (PO:0000051) that covers the abaxial/lower surface of a petiole (PO:0020038). NMDCO_relaxed.owl PO:0025189 biolink:NamedThing petiole stomatal complex A leaf stomatal complex that is part of a petiole. NMDCO_relaxed.owl PO:0008041 biolink:NamedThing stem internode elongation zone A shoot axis internode elongation zone (PO:0025100) that is part of a stem internode (PO:0009047). NMDCO_relaxed.owl PO:0025100 biolink:NamedThing shoot axis internode elongation zone A plant axis elongation zone (PO:0025180) that is part of a shoot axis internode (PO:0005005). NMDCO_relaxed.owl PO:0025101 biolink:NamedThing branch internode elongation zone A shoot axis internode elongation zone (PO:0025100) that is part of a branch internode (PO:0025080). NMDCO_relaxed.owl PO:0008042 biolink:NamedThing stem internode differentiation zone A shoot internode differentiation zone that is part of a stem internode. NMDCO_relaxed.owl PO:0025102 biolink:NamedThing shoot internode differentiation zone A plant axis differentiation zone that is part of a shoot axis. NMDCO_relaxed.owl PO:0025103 biolink:NamedThing branch internode differentiation zone A shoot internode differentiation zone that is part of a branch internode. NMDCO_relaxed.owl PO:0009001 biolink:NamedThing fruit A multi-tissue plant structure (PO:0025496) that develops from a gynoecium (PO:0009062), or a single carpel (PO:0009030), and at maturity may have as parts one or more seeds (PO:0009010). NMDCO_relaxed.owl PO:0009010 biolink:NamedThing seed A multi-tissue plant structure (PO:0025496) that develops from a plant ovule (PO:0020003) and has as parts a plant embryo (PO:0009009) enclosed in a seed coat (PO:0009088). NMDCO_relaxed.owl PO:0025007 biolink:NamedThing collective plant organ structure A collective plant structure (PO:0025497) that is a proper part of a whole plant (PO:0000003), and is composed of two or more adjacent plant organs (PO:0009008) and the associated portions of plant tissue (PO:0009007). NMDCO_relaxed.owl PO:0009066 biolink:NamedThing anther A collective plant organ structure (PO:0025007) that is the pollen-bearing part of a stamen (PO:0009029). NMDCO_relaxed.owl PO:0009069 biolink:NamedThing anther theca A collective plant organ structure (PO:0025007) that is part of an anther (PO:0009066) and consists of a pair of sporangia (PO:0025094) that dehisce down a common slit. NMDCO_relaxed.owl PO:0025025 biolink:NamedThing root system A collective plant organ structure (PO:0025007) that produces root meristems (PO:0006085), the plant structures (PO:0009011) that arise from them and the parts thereof. NMDCO_relaxed.owl PO:0025359 biolink:NamedThing sorus A collective plant organ structure (PO:0025007) on the surface of a vascular leaf (PO:0009025) that has as part a cluster of two or more adjacent sporangia (PO:0025094). NMDCO_relaxed.owl PO:0025360 biolink:NamedThing ceonosorus A collective plant organ structure (PO:0025007) on the surface of a vascular leaf that has as parts two or more fused sori (PO:0025359). NMDCO_relaxed.owl PO:0028005 biolink:NamedThing gametophyte coma A collective plant organ structure (PO:0025007) which is a cluster of gametophore branches (PO:0030021) or non-vascular leaves (PO:0025075) at the top of the gametophore axis (PO:0030020), forming a tuft. NMDCO_relaxed.owl PO:0009018 biolink:NamedThing basal endosperm transfer cell A transfer cell that is part of a basal endosperm transfer layer. NMDCO_relaxed.owl PO:0025458 biolink:NamedThing transfer companion cell A companion cell (PO:0000400) that is a transfer cell (PO:0000078) with many cell wall invaginations. NMDCO_relaxed.owl PO:0009023 biolink:NamedThing leaf axil An axil that is the space between a shoot axis and a leaf that branches from the shoot axis. NMDCO_relaxed.owl PO:0025225 biolink:NamedThing bract axil An axil that is the space between a shoot axis and a bract that branches from the shoot axis. NMDCO_relaxed.owl PO:0025226 biolink:NamedThing branch axil An axil that is the space between a shoot axis and a branch that branches from the shoot axis. NMDCO_relaxed.owl PO:0025075 biolink:NamedThing non-vascular leaf A leaf (PO:0025034) in a non-vascular plant. NMDCO_relaxed.owl PO:0009027 biolink:NamedThing megasporophyll A structure upon which (or in the axil of which) one or more megasporangia are borne; in flowering plants, a carpel. NMDCO_relaxed.owl PO:0009028 biolink:NamedThing microsporophyll A structure on which one or more microsporangia are borne; in flowering plants, the stamen. NMDCO_relaxed.owl PO:0009054 biolink:NamedThing inflorescence bract A bract (PO:0009055) subtending a branch of the inflorescence (PO:0009049) or borne on the inflorescence axis (PO:0020122) below any branch (PO:0025073) or flower (PO:0009046). NMDCO_relaxed.owl PO:0030028 biolink:NamedThing perigonial bract A bract (PO:0009055) that subtends an antheridium (PO:0025125). NMDCO_relaxed.owl PO:0030030 biolink:NamedThing perichaetal bract A bract (PO:0009055) that subtends an archegonium (PO:0025126). NMDCO_relaxed.owl PO:0009037 biolink:NamedThing lemma The lower, usually larger, of the pair of flower bracts (PO:0009034) enclosing a (PO:0009082) spikelet floret. NMDCO_relaxed.owl PO:0009038 biolink:NamedThing palea The upper (distal), usually smaller, of the pair of flower bracts (PO:0009034) enclosing a (PO:0009082) spikelet floret. NMDCO_relaxed.owl PO:0025577 biolink:NamedThing epicalyx bract A flower bract (PO:0009034) that is part of the epicalyx (PO:0009063). NMDCO_relaxed.owl PO:0009045 biolink:NamedThing involucral bract An inflorescence bract (PO:0009054) of an involucre (PO:0009100). NMDCO_relaxed.owl PO:0009040 biolink:NamedThing sterile lemma A flower bract in the position of a lemma, but not enclosing floral organs. NMDCO_relaxed.owl PO:0009041 biolink:NamedThing fertile lemma A lemma that encloses a functional flower, with androecium, gynoecium or both. NMDCO_relaxed.owl PO:0009043 biolink:NamedThing bracteole A prophyll (PO:0009042) which is borne singly or in pairs on a pedicel (PO:0030112). NMDCO_relaxed.owl PO:0009044 biolink:NamedThing perigynium Sac-like bract subtending the pistillate flower, as in Carex. NMDCO_relaxed.owl PO:0025367 biolink:NamedThing prophyll tendril A prophyll that is slender and coiling and lacks a lamina. NMDCO_relaxed.owl PO:0009052 biolink:NamedThing inflorescence flower pedicel A flower pedicel (PO:0030113) that bears a flower (PO:0009046) in an inflorescence (PO:0009049). NMDCO_relaxed.owl PO:0030113 biolink:NamedThing flower pedicel A pedicel (PO:0030112) that bears a flower (PO:0009046). NMDCO_relaxed.owl PO:0009067 biolink:NamedThing filament A stalk (PO:0025066) that is part of a stamen (PO:0009029). NMDCO_relaxed.owl PO:0020006 biolink:NamedThing funicle A stalk (PO:0025066) that attaches a plant ovule (PO:0020003) to a placenta (PO:0025078). NMDCO_relaxed.owl PO:0020038 biolink:NamedThing petiole A stalk (PO:0025066) of a vascular leaf (PO:0009025). NMDCO_relaxed.owl PO:0020050 biolink:NamedThing petiolule A stalk (PO:0009025) of a leaflet (PO:0020049). NMDCO_relaxed.owl PO:0020055 biolink:NamedThing leaf rachis A stalk (PO:0025066) that is the main axis of a pinnate or more highly compound leaf, that bears leaflets or divisions of the axis. NMDCO_relaxed.owl PO:0030032 biolink:NamedThing seta A stalk (PO:0025066) that supports a spore capsule, the sporangium (PO:0025094). NMDCO_relaxed.owl PO:0030033 biolink:NamedThing antheridiophore A stalk (PO:0025066) that supports an antheridium head (PO:0030075). NMDCO_relaxed.owl PO:0030035 biolink:NamedThing antheridium stalk A stalk (PO:0025066) that is the basal part of an antheridium (PO:0025125). NMDCO_relaxed.owl PO:0030036 biolink:NamedThing archegonium stalk A stalk (PO:0025066) that the basal part of an archegonium (PO:0025126). NMDCO_relaxed.owl PO:0009071 biolink:NamedThing anther wall tapetum A microsporangium tapetum (PO:0025314) that is part of an anther wall (PO:0000002). NMDCO_relaxed.owl PO:0025314 biolink:NamedThing microsporangium tapetum An tapetum (PO:0025313) that is part of a microsporangium wall (PO:0025307). NMDCO_relaxed.owl PO:0009078 biolink:NamedThing pistillode A sterile pistil, often rudimentary. NMDCO_relaxed.owl PO:0025088 biolink:NamedThing gynoecium ridge A gynoecium in the early stages of development, characterized as a ridge on the abaxial surface of the floral meristem that develops from a gynoecium primordium. NMDCO_relaxed.owl PO:0025332 biolink:NamedThing disk flower A small flower (PO:0009046) in the center of a head-type (capitulum) inflorescence (PO:0009049). NMDCO_relaxed.owl PO:0009090 biolink:NamedThing aril An arilloid that is an outgrowth of a seed from a seed funicle. NMDCO_relaxed.owl PO:0019023 biolink:NamedThing strophiole An arilloid that is an outgrowth of a seed on a raphe. NMDCO_relaxed.owl PO:0020060 biolink:NamedThing caruncle An arilloid that is an outgrowth of a seed next to the micropyle. NMDCO_relaxed.owl PO:0025378 biolink:NamedThing arillode An arilloid that is an elaborate outgrowth of a seed at the micropylar end. NMDCO_relaxed.owl PO:0009105 biolink:NamedThing inflorescence axillary meristem An inflorescence meristem (PO:0009108) that gives rise to a higher order inflorescence axis (PO:0009081). NMDCO_relaxed.owl PO:0020002 biolink:NamedThing anther wall endothecium An microsporangium endothecium (PO:0025309) that part of an anther wall (PO:0000002). NMDCO_relaxed.owl PO:0025309 biolink:NamedThing microsporangium endothecium A sporangium wall endothecium (PO:0030049) that is part of a microsporangium wall (PO:0025307). NMDCO_relaxed.owl PO:0025311 biolink:NamedThing microsporangium exothecium A portion of exothecium (PO:0030073) that is part of a microsporangium wall (PO:0025307). NMDCO_relaxed.owl PO:0020048 biolink:NamedThing microspore The smaller, in general, of the two kinds of spores produced after meiosis in the life cycle of a heterosporous plant, and on germination giving rise to the male gametophyte. NMDCO_relaxed.owl PO:0025201 biolink:NamedThing megasporangium A sporangium in which megaspores are produced. NMDCO_relaxed.owl PO:0020022 biolink:NamedThing plant ovule inner integument A plant ovule integument (PO:0020021) which is the innermost of the two layers of tissue that usually cover the plant ovule (PO:0020003), contiguous to the nucellus (PO:0020020) and usually contributing to the formation of the plant ovule micropyle (PO:0020025) at the apex. NMDCO_relaxed.owl PO:0020023 biolink:NamedThing plant ovule outer integument A plant ovule integument (PO:0020021) which is the outermost the two layers of tissue that usually cover the plant ovule (PO:0020003), contiguous to the nucellus (PO:0020020) and usually contributing to the formation of the plant ovule micropyle (PO:0020025) at the apex. NMDCO_relaxed.owl PO:0025222 biolink:NamedThing reproductive shoot apex A shoot apex that has as part a reproductive shoot apical meristem. NMDCO_relaxed.owl PO:0025223 biolink:NamedThing vegetative shoot apex A shoot apex PO:0000037) that has as part a vegetative shoot apical meristem (PO:0008016). NMDCO_relaxed.owl PO:0028004 biolink:NamedThing branch apex A shoot axis apex (PO:0000037) that is part of a branch (PO:0025073). NMDCO_relaxed.owl PO:0020035 biolink:NamedThing epicotyl The first stem internode (PO:0020142) above the cotyledonary node (PO:0025321) of a plant embryo (PO:0009009) or a seedling (PO:0000003). NMDCO_relaxed.owl PO:0020037 biolink:NamedThing mesocotyl A stem internode (PO:0020142) that is the part of a plant embryo axis (PO:0019018) or a seedling stem (PO:0009047) above the scutellum (PO:0020110) and below the coleoptile (PO:0020033). NMDCO_relaxed.owl PO:0020100 biolink:NamedThing hypocotyl A stem internode (PO:0020142) below the cotyledonary node (PO:0025321) and transitional to a root (PO:0009005) of a plant embryo (PO:0009009) or a seedling (PO:0000003). NMDCO_relaxed.owl PO:0020039 biolink:NamedThing leaf lamina A phyllome lamina (PO:0025396) that is the part of a leaf (PO:0025034) exclusive of the petiole (PO:0020038) or leaf sheath (PO:0020104), if either is present. NMDCO_relaxed.owl PO:0025396 biolink:NamedThing phyllome lamina A plant organ lamina (PO:0025513) that is part of a phyllome (PO:0006001). NMDCO_relaxed.owl PO:0025129 biolink:NamedThing petiole lamina A lamina (PO:0025060) that is part of a petiole (PO:0020038). NMDCO_relaxed.owl PO:0020040 biolink:NamedThing leaf base A phyllome base (PO:0025140) that is part of a leaf (PO:0025034). NMDCO_relaxed.owl PO:0025146 biolink:NamedThing petal base A phyllome base (PO:0025140) that is part of a petal (PO:0009032). NMDCO_relaxed.owl PO:0025147 biolink:NamedThing sepal base A phyllome base that is part of a sepal. NMDCO_relaxed.owl PO:0025148 biolink:NamedThing tepal base A phyllome base (PO:0025140) that is part of a tepal (PO:0009033). NMDCO_relaxed.owl PO:0025155 biolink:NamedThing bract base A phyllome base (PO:0025140) that is part of a bract (PO:0009055). NMDCO_relaxed.owl PO:0020045 biolink:NamedThing pinnate leaf A once-compound leaf with leaflets borne along a rachis. NMDCO_relaxed.owl PO:0020046 biolink:NamedThing palmate leaf A once-compound leaf divided into several leaflets which arise at the same point, there being no rachis. NMDCO_relaxed.owl PO:0020054 biolink:NamedThing bud scale leaf A scale leaf that surrounds a dormant or perennating bud. NMDCO_relaxed.owl PO:0025278 biolink:NamedThing rhizome scale leaf A scale leaf that grows from a rhizome. NMDCO_relaxed.owl PO:0020097 biolink:NamedThing generative cell A spermatogenous cell (PO:0025525) of the microgametophyte (PO:0025280) that divides to produce two pollen sperm cells (PO:0025121). NMDCO_relaxed.owl PO:0025526 biolink:NamedThing body cell A spermatogenous cell (PO:0025525) of the microgametophyte (PO:0025280) that divides to produce a vegetative cell (PO:0020099) and the pollen sperm cell (PO:0025121). NMDCO_relaxed.owl PO:0020103 biolink:NamedThing flag leaf The last mature leaf before the inflorescence in a cereal crop plant. NMDCO_relaxed.owl PO:0025335 biolink:NamedThing phyllode leaf An adult ensiform leaf with a lamina that develops in a median plane, rather a transverse plane, throughout the length of the leaf and is a result of increased activity of the adaxial meristem early in development. NMDCO_relaxed.owl PO:0020124 biolink:NamedThing root stele A stele (PO:0025197) that is part of a root (PO:0009005). NMDCO_relaxed.owl PO:0025198 biolink:NamedThing shoot axis stele A stele that is part of a shoot axis. NMDCO_relaxed.owl PO:0020126 biolink:NamedThing tassel inflorescence A staminate inflorescence (PO:0025601) in Zea species that bears the tassel spikelet (PO:0006309) on a terminal inflorescence axis (PO:0020122). NMDCO_relaxed.owl PO:0025601 biolink:NamedThing staminate inflorescence An inflorescence (PO:0009049) that includes as part only staminate flowers (PO:0025600). NMDCO_relaxed.owl PO:0020136 biolink:NamedThing ear inflorescence A pistillate inflorescence (PO:0025598) in Zea species that is highly compacted and bears the ear spikelets (PO:0006320) on a lateral inflorescence axis (PO:0020122). NMDCO_relaxed.owl PO:0025598 biolink:NamedThing pistillate inflorescence An inflorescence (PO:0009049) that includes as part only pistillate flowers (PO:0025599). NMDCO_relaxed.owl PO:0020137 biolink:NamedThing leaf apex A phyllome apex (PO:0025139) that is part of a leaf (PO:0025034). NMDCO_relaxed.owl PO:0025143 biolink:NamedThing tepal apex A phyllome apex PO:0025139) that is part of a tepal (PO:0009033). NMDCO_relaxed.owl PO:0025144 biolink:NamedThing petal apex A phyllome apex (PO:0025139) that is part of a petal (PO:0009032). NMDCO_relaxed.owl PO:0025145 biolink:NamedThing sepal apex A phyllome apex that is part of a sepal. NMDCO_relaxed.owl PO:0025154 biolink:NamedThing bract apex A phyllome apex (PO:0025139) that is part of a bract (PO:0009055). NMDCO_relaxed.owl PO:0025348 biolink:NamedThing phyllome lamina vein A vascular bundle (PO:0005020) that is part of a phyllome lamina (PO:0025396). NMDCO_relaxed.owl PO:0020139 biolink:NamedThing leaf midvein A primary leaf vein (PO:0025413) that is the central vein of a vascular leaf (PO:0009025). NMDCO_relaxed.owl PO:0025194 biolink:NamedThing root nodule meristem A root meristem (PO:0006085) that gives rise to a root nodule (PO:0003023). NMDCO_relaxed.owl PO:0025002 biolink:NamedThing basal root A shoot-borne internode root (PO:0025593) that arises from a part of the hypocotyl (PO:0020100). NMDCO_relaxed.owl PO:0025009 biolink:NamedThing leaf lamina margin A leaf margin (PO:0020128) that is part of a leaf lamina (PO:0020039). NMDCO_relaxed.owl PO:0025012 biolink:NamedThing cotyledon margin A leaf margin (PO:0020128) that is part of a cotyledon (PO:0020030). NMDCO_relaxed.owl PO:0025019 biolink:NamedThing carpel margin The margin of a carpel. NMDCO_relaxed.owl PO:0025020 biolink:NamedThing stamen margin The margin of a stamen. NMDCO_relaxed.owl PO:0025021 biolink:NamedThing collective tepal structure A perianth (PO:0009058) consisting of one or more tepals (PO:0009033). NMDCO_relaxed.owl PO:0025580 biolink:NamedThing fused perianth A perianth (PO:0009058) in which one or more of the petals (PO:0009032), sepals (PO:0009031), and/or tepals (PO:0009033) are fused (PATO:0000642). NMDCO_relaxed.owl PO:0025036 biolink:NamedThing tuber storage parenchyma A portion of storage parenchyma (PO:0025035) that is part of a tuber (PO:0025522). NMDCO_relaxed.owl PO:0025037 biolink:NamedThing fruit storage parenchyma A portion of storage parenchyma that is part of a fruit. NMDCO_relaxed.owl PO:0025038 biolink:NamedThing subterranean tuber storage parenchyma A portion of tuber storage parenchyma (PO:0025035) that is part of a subterranean tuber (PO:0004547). NMDCO_relaxed.owl PO:0025039 biolink:NamedThing aerial tuber storage parenchyma A portion of tuber storage parenchyma (PO:0025036) that is part of an aerial tuber (PO:0004548). NMDCO_relaxed.owl PO:0025040 biolink:NamedThing shoot axis tuber axillary vegetative bud An axillary vegetative bud (PO:0004712) that is part of a shoot axis tuber (PO:0004543). NMDCO_relaxed.owl PO:0025353 biolink:NamedThing areole bud An axillary vegetative bud (PO:0004712) that is not elongated, in which the vascular leaves (PO:0009025) develop as spine leaves (PO:0025173). NMDCO_relaxed.owl PO:0025041 biolink:NamedThing aerial tuber axillary vegetative bud A tuber axillary vegetative bud that is part of an aerial tuber. NMDCO_relaxed.owl PO:0025042 biolink:NamedThing subterranean tuber axillary vegetative bud A tuber axillary vegetative bud that is part of a subterranean tuber. NMDCO_relaxed.owl PO:0025043 biolink:NamedThing shoot axis tuber periderm A portion of shoot axis periderm (PO:0005048) that is part of a shoot axis tuber (PO:0004543). NMDCO_relaxed.owl PO:0025044 biolink:NamedThing aerial tuber periderm A portion of tuber periderm that is part of an aerial tuber. NMDCO_relaxed.owl PO:0025045 biolink:NamedThing subterranean tuber periderm A portion of tuber periderm that is part of a subterranean tuber. NMDCO_relaxed.owl PO:0025046 biolink:NamedThing shoot axis tuber epidermis A portion of shoot axis epidermis (PO:0000112) that is part of a shoot axis tuber (PO:0004543). NMDCO_relaxed.owl PO:0025171 biolink:NamedThing shoot axis prickle A prickle (PO:0025169) that is part of a shoot axis (PO:0025029). NMDCO_relaxed.owl PO:0025179 biolink:NamedThing branch epidermis A portion of shoot axis epidermis (PO:0006035) that is part of a branch (PO:0025073). NMDCO_relaxed.owl PO:0030069 biolink:NamedThing paraphyllium A portion of plant epidermis (PO:0005679) tissue that is an outgrowth from the epidermis between the leaves of a gametophore axis (PO:0030020). NMDCO_relaxed.owl PO:0025047 biolink:NamedThing aerial tuber epidermis A portion of shoot axis tuber epidermis (PO:0025046) that is part of an aerial tuber (PO:0004548). NMDCO_relaxed.owl PO:0025048 biolink:NamedThing subterranean tuber epidermis A shoot axis tuber epidermis (PO:0025046) that is part of a subterranean shoot axis tuber (PO:0004547). NMDCO_relaxed.owl PO:0025049 biolink:NamedThing subterranean tuber interfascicular region A tuber interfascicular region that is part of a subterranean tuber storage parenchyma. NMDCO_relaxed.owl PO:0025050 biolink:NamedThing tuber interfascicular region An interfascicular region that is part of a tuber storage parenchyma. NMDCO_relaxed.owl PO:0025051 biolink:NamedThing aerial tuber interfascicular region A tuber interfascicular region that is part of an aerial tuber storage parenchyma. NMDCO_relaxed.owl PO:0025053 biolink:NamedThing subterranean tuber pith A portion of tuber pith (PO:0025052) that is part of a subterranean tuber storage parenchyma (PO:0025038). NMDCO_relaxed.owl PO:0025054 biolink:NamedThing aerial tuber pith A portion of tuber pith (PO:0025052) that is part of an aerial tuber storage parenchyma (PO:0025039). NMDCO_relaxed.owl PO:0025056 biolink:NamedThing aerial tuber cortex A portion of tuber cortex that is part of an aerial tuber storage parenchyma. NMDCO_relaxed.owl PO:0025057 biolink:NamedThing subterranean tuber cortex A portion of tuber cortex that is part of a subterranean tuber storage parenchyma. NMDCO_relaxed.owl PO:0025061 biolink:NamedThing tuber perimedullary zone A perimedullary zone (PO:0025058) that is part of a tuber pith (PO:0025052). NMDCO_relaxed.owl PO:0025064 biolink:NamedThing shoot axis perimedullary zone A perimedullary zone (PO:0025058) that is part of a shoot axis pith (PO:0005041). NMDCO_relaxed.owl PO:0025062 biolink:NamedThing aerial tuber perimedullary zone A tuber perimedullary zone that is part of an aerial tuber pith. NMDCO_relaxed.owl PO:0025063 biolink:NamedThing subterranean tuber perimedullary zone A tuber perimedullary zone that is part of a subterranean tuber pith. NMDCO_relaxed.owl PO:0025065 biolink:NamedThing root perimedullary zone A perimedullary zone that is part of a root pith. NMDCO_relaxed.owl PO:0025068 biolink:NamedThing shoot axis tuber axillary bud meristem An axillary bud meristem (PO:0000232) that is part of a shoot axis tuber (PO:0004543). NMDCO_relaxed.owl PO:0025069 biolink:NamedThing aerial tuber axillary bud meristem A tuber axillary bud meristem that is part of an aerial tuber. NMDCO_relaxed.owl PO:0025070 biolink:NamedThing subterranean tuber axillary bud meristem A tuber axillary bud meristem that is part of a subterranean tuber. NMDCO_relaxed.owl PO:0025074 biolink:NamedThing embryo sac A megagametophyte (PO:0025279) that is located in a plant ovary ovule (PO:0025490). NMDCO_relaxed.owl PO:0025079 biolink:NamedThing aerial tuber axillary shoot An axillary shoot that develops from an aerial tuber axillary bud. NMDCO_relaxed.owl PO:0025081 biolink:NamedThing subterranean tuber axillary shoot An axillary shoot that develops from a subterranean tuber axillary bud. NMDCO_relaxed.owl PO:0025181 biolink:NamedThing root elongation zone A plant axis elongation zone (PO:0025180) that is part of a root tip (PO:0000025) and located proximal to a root apical meristem (PO:0020147). NMDCO_relaxed.owl PO:0025112 biolink:NamedThing second order infructescence axis A higher order infructescence axis (PO:0025243) which arises from a first order infructescence axis (PO:0025244) and develops from a second order inflorescence axis (PO:0006321). NMDCO_relaxed.owl PO:0025243 biolink:NamedThing higher order infructescence axis An infructescence axis (PO:0025242), which is a branch (PO:0025073) in an infructescence (PO:0006342), that develops from a higher order inflorescence axis (PO:0009081). NMDCO_relaxed.owl PO:0025113 biolink:NamedThing third order infructescence axis A higher order infructescence axis (PO:0025243) which arises from a second order infructescence axis (PO:0025112) and develops from a third order inflorescence axis (PO:0006322). NMDCO_relaxed.owl PO:0025114 biolink:NamedThing fourth order infructescence axis A higher order infructescence axis (PO:0025243) which arises from a third order infructescence axis (PO:0025113) and develops from a fourth order inflorescence axis (PO:0025105). NMDCO_relaxed.owl PO:0025115 biolink:NamedThing fifth order infructescence axis A higher order infructescence axis (PO:0025243) which arises from a fourth order infructescence axis (PO:0025114) and develops from a fifth order inflorescence axis (PO:0025106). NMDCO_relaxed.owl PO:0025116 biolink:NamedThing sixth order infructescence axis A higher order infructescence axis (PO:0025243) which arises from a fifth order infructescence axis (PO:0025115) and develops from a sixth order inflorescence axis (PO:0025107). NMDCO_relaxed.owl PO:0025252 biolink:NamedThing seventh order infructescence axis A higher order infructescence axis (PO:0025243) which arises from a sixth order infructescence axis (PO:0025116) and develops from a seventh order inflorescence axis (PO:0025108). NMDCO_relaxed.owl PO:0025253 biolink:NamedThing eighth order infructescence axis A higher order infructescence axis (PO:0025243) which arises from a seventh order infructescence axis (PO:0025252) and develops from an eighth order inflorescence axis (PO:0025109). NMDCO_relaxed.owl PO:0025254 biolink:NamedThing ninth order infructescence axis A higher order infructescence axis (PO:0025243) which arises from an eighth order infructescence axis (PO:0025253) and develops from a ninth order inflorescence axis (PO:0025110). NMDCO_relaxed.owl PO:0025255 biolink:NamedThing tenth order infructescence axis A higher order infructescence axis (PO:0025243) which arises from a ninth order infructescence axis (PO:0025254) and develops from a tenth order inflorescence axis (PO:0025111). NMDCO_relaxed.owl PO:0025120 biolink:NamedThing antheridium sperm cell A plant sperm cell (PO:0000084) which develops from a spermatogenous cell (PO:0025525) and is located in an antheridium (PO:0025125). NMDCO_relaxed.owl PO:0025121 biolink:NamedThing pollen sperm cell A plant sperm cell (PO:0000084) that is part of the pollen (PO:0025281). NMDCO_relaxed.owl PO:0025122 biolink:NamedThing archegonium egg cell A plant egg cell (PO:0020094) that develops from the archegonium central cell (PO:0025509) and is located in the venter (PO:0030038). NMDCO_relaxed.owl PO:0025125 biolink:NamedThing antheridium A multicellular plant gametangium (PO:0025124) that produces antheridium sperm cells (PO:0025120) and has as parts an antheridium jacket layer (PO:0030053) and an antheridium stalk (PO:0030035). NMDCO_relaxed.owl PO:0025126 biolink:NamedThing archegonium A multicellular plant gametangium (PO:0025124) that develops from an archegonium initial cell (PO:0025510) and has as parts a venter (PO:0030038) and an archegonium neck (PO:0030039). NMDCO_relaxed.owl PO:0025135 biolink:NamedThing cigar leaf lamina abaxial epidermis A portion of leaf lamina abaxial epidermis PO:0000049) that covers the abaxial surface of a cigar leaf (PO:0025130). NMDCO_relaxed.owl PO:0025136 biolink:NamedThing free tepal A tepal (PO:0009033) that is part of a collective tepal structure (PO:0025021), along with a fused collective tepal structure (PO:0025138), but is separate from (PATO:0001505) the other tepals. NMDCO_relaxed.owl PO:0025137 biolink:NamedThing fused tepal A tepal (PO:0009033) that is part of a fused collective tepal structure (PO:0025138) in which it is fused to at least one other tepal. NMDCO_relaxed.owl PO:0025138 biolink:NamedThing fused collective tepal structure A collective tepal structure (PO:0025021) in which there are at least two fused tepals (PO:0025137). NMDCO_relaxed.owl PO:0025142 biolink:NamedThing leaf tip A phyllome tip (PO:0025141) that is part of a leaf apex (PO:0020137). NMDCO_relaxed.owl PO:0025149 biolink:NamedThing petal tip A phyllome tip that is part of a petal apex. NMDCO_relaxed.owl PO:0025150 biolink:NamedThing sepal tip A phyllome tip that is part of a sepal apex. NMDCO_relaxed.owl PO:0025151 biolink:NamedThing tepal tip A phyllome tip that is part of a tepal apex. NMDCO_relaxed.owl PO:0025156 biolink:NamedThing bract tip A phyllome tip that is part of a bract apex. NMDCO_relaxed.owl PO:0025152 biolink:NamedThing peduncle epidermis A portion of branch epidermis (PO:0025179) that is part of a peduncle (PO:0009053). NMDCO_relaxed.owl PO:0025153 biolink:NamedThing peduncle trichome A shoot axis trichome that is part of a peduncle epidermis. NMDCO_relaxed.owl PO:0025176 biolink:NamedThing stem trichome A shoot axis trichome that is part of a stem epidermis. NMDCO_relaxed.owl PO:0025177 biolink:NamedThing branch trichome A shoot axis trichome that is part of a branch epidermis. NMDCO_relaxed.owl PO:0025159 biolink:NamedThing bract abaxial epidermis A portion of bract epidermis (PO:0025158) that covers the abaxial/lower surface of a bract (PO:0009055). NMDCO_relaxed.owl PO:0025160 biolink:NamedThing bract adaxial epidermis A portion of bract epidermis (PO:0025158) that covers the adaxial/upper surface of a bract (PO:0009055). NMDCO_relaxed.owl PO:0025216 biolink:NamedThing bract stomatal complex A phyllome stomatal complex (PO:0025215) that is part of a bract (PO:0009055). NMDCO_relaxed.owl PO:0025163 biolink:NamedThing multicellular trichome branch cell A trichome cell (PO:0008030) that forms a branch of a multicellular trichome (PO:0025162). NMDCO_relaxed.owl PO:0025317 biolink:NamedThing axillary hair terminal cell A trichome cell (PO:0008030) that is the long terminal cell of an axillary hair (PO:0008030). NMDCO_relaxed.owl PO:0025319 biolink:NamedThing axillary hair basal cell A trichome cell (PO:0008030) that is part of a base of an axillary hair (PO:0025316). NMDCO_relaxed.owl PO:0025604 biolink:NamedThing resin cell A plant epidermal cell (PO:0004013) that secretes plant resin (PO:0025603), and may line resin canals (PO:0005665) and/or be associated with resin blisters (or cysts). NMDCO_relaxed.owl PO:0025166 biolink:NamedThing papilla cell An epidermal pavement cell with a short protuberance. NMDCO_relaxed.owl PO:0025499 biolink:NamedThing sepal epidermis giant cell An shoot epidermal pavement cell (PO:0000332) that is part of sepal epidermis (PO:0006040) and is approximately one fifth the length of a sepal (PO:0009031). NMDCO_relaxed.owl PO:0025167 biolink:NamedThing leaf papilla cell A papilla cell that is part of a leaf epidermis. NMDCO_relaxed.owl PO:0025168 biolink:NamedThing stigma papilla cell A papilla cell that is part of a stigma epidermis. NMDCO_relaxed.owl PO:0025174 biolink:NamedThing spine stipule A stipule that is sclerified and pointed. NMDCO_relaxed.owl PO:0025221 biolink:NamedThing tepal stomatal complex A phyllome stomatal complex that is part of a tepal (PO:0009033). NMDCO_relaxed.owl PO:0025190 biolink:NamedThing leaf abaxial stomatal complex A leaf stomatal complex (PO:0025183) that is part of a leaf abaxial epidermis (PO:0006019). NMDCO_relaxed.owl PO:0025191 biolink:NamedThing leaf adaxial stomatal complex A leaf stomatal complex that is part of a leaf adaxial epidermis. NMDCO_relaxed.owl PO:0025192 biolink:NamedThing tepal abaxial epidermis A portion of tepal epidermis (PO:0025184) that covers the abaxial/lower surface of a tepal (PO:0009033). NMDCO_relaxed.owl PO:0025193 biolink:NamedThing tepal adaxial epidermis A portion of tepal epidermis (PO:0025184) that covers the adaxial/upper surface of a tepal (PO:0009033). NMDCO_relaxed.owl PO:0025199 biolink:NamedThing branch stele A shoot axis stele that is part of a branch. NMDCO_relaxed.owl PO:0025200 biolink:NamedThing stem stele A shoot axis stele that is part of a stem. NMDCO_relaxed.owl PO:0025202 biolink:NamedThing microsporangium A sporangium (PO:0025094) in which microspores (PO:0020048) are produced. NMDCO_relaxed.owl PO:0025203 biolink:NamedThing pericarp vascular bundle A vascular bundle (PO:0005020) that is part of a pericarp (PO:0009084). NMDCO_relaxed.owl PO:0025434 biolink:NamedThing petiole vascular bundle A vascular bundle (PO:0005020) that is part of a petiole vascular system (PO:0000052). NMDCO_relaxed.owl PO:0025210 biolink:NamedThing leaf abaxial trichome A leaf trichome that is part of a leaf abaxial epidermis. NMDCO_relaxed.owl PO:0025211 biolink:NamedThing leaf adaxial trichome A leaf trichome that is part of a leaf adaxial epidermis. NMDCO_relaxed.owl PO:0025234 biolink:NamedThing phyllome stomatal pore A stomatal pore that is part of a phyllome stomatal complex. NMDCO_relaxed.owl PO:0025235 biolink:NamedThing leaf stomatal pore A phyllome stomatal pore that is part of a leaf stomatal complex. NMDCO_relaxed.owl PO:0025236 biolink:NamedThing phyllome guard cell A guard cell that is part of a phyllome stomatal complex. NMDCO_relaxed.owl PO:0025237 biolink:NamedThing leaf guard cell A phyllome guard cell that is part of a leaf stomatal complex. NMDCO_relaxed.owl PO:0025238 biolink:NamedThing abaxial petiole canal A petiole canal on the abaxial surface of a petiole. NMDCO_relaxed.owl PO:0025239 biolink:NamedThing adaxial petiole canal A petiole canal on the adaxial surface of a petiole. NMDCO_relaxed.owl PO:0025244 biolink:NamedThing first order infructescence axis An infructescence axis (PO:0025242), which is the primary or main axis of an infructescence (PO:0006342), that develops from a first order inflorescence axis (PO:0025104). NMDCO_relaxed.owl PO:0025250 biolink:NamedThing leaf sheath abaxial epidermis A portion of leaf sheath epidermis (PO:0025249) that covers the abaxial/lower surface of a leaf sheath (PO:0020104). NMDCO_relaxed.owl PO:0025251 biolink:NamedThing leaf sheath adaxial epidermis A portion of leaf sheath epidermis (PO:0025249) that covers the adaxial/upper surface of a leaf sheath (PO:0020104). NMDCO_relaxed.owl PO:0025256 biolink:NamedThing lateral root elongation zone A root elongation zone that is part of a lateral root tip. NMDCO_relaxed.owl PO:0025257 biolink:NamedThing primary root elongation zone A root elongation zone (PO:0025181) that is part of a primary root tip (PO:0000026). NMDCO_relaxed.owl PO:0025259 biolink:NamedThing leaf procambium A portion of shoot procambium (PO:0025276) tissue that is part of a vascular leaf (PO:0009025). NMDCO_relaxed.owl PO:0025260 biolink:NamedThing shoot axis procambium A portion of shoot procambium that is part of a shoot apical meristem and gives rise to the primary vascular tissue of a shoot axis. NMDCO_relaxed.owl PO:0025264 biolink:NamedThing anther locule A sporangium locule that is part of an anther and is a cavity within a single pollen sac or two or more fused pollen sacs. NMDCO_relaxed.owl PO:0025265 biolink:NamedThing sporangium locule A locule (PO:0025263) that is a cavity in a sporangium (PO:0025094) or several fused sporangia. NMDCO_relaxed.owl PO:0025266 biolink:NamedThing plant ovary locule A locule (PO:0025263) that is a cavity in a plant ovary (PO:0009072). NMDCO_relaxed.owl PO:0025270 biolink:NamedThing fruit locule A locule (PO:0025263) that is a cavity in a fruit (PO:0009001) and develops from a plant ovary locule (PO:0025266). NMDCO_relaxed.owl PO:0025267 biolink:NamedThing fruit replum A portion of fruit placenta tissue (PO:0004535) that divides a fruit (PO:0009001) into two or more chambers and develops from a plant ovary replum (PO:0025272). NMDCO_relaxed.owl PO:0025273 biolink:NamedThing stem procambium A portion of shoot axis procambium gives rise to the primary vascular tissue of a stem. NMDCO_relaxed.owl PO:0025274 biolink:NamedThing branch procambium A portion of shoot axis procambium gives rise to the primary vascular tissue of a branch. NMDCO_relaxed.owl PO:0025277 biolink:NamedThing pollen sac A microsporangium that is part of a sporophyll and where the pollen grains develop and are located after they develop. NMDCO_relaxed.owl PO:0025281 biolink:NamedThing pollen A microgametophyte (PO:0025280) that develops from a microspore (PO:0020048) is located in a pollen sac (PO:0025277). NMDCO_relaxed.owl PO:0025283 biolink:NamedThing antheridium microgametophyte A microgametophyte (PO:0025280) that has as parts one or more antheridia (PO:0025125). NMDCO_relaxed.owl PO:0030015 biolink:NamedThing sporophyte meristematic apical cell A meristematic apical cell that is part of a whole plant in the sporophytic phase. NMDCO_relaxed.owl PO:0030008 biolink:NamedThing root meristematic apical cell A sporophyte meristematic apical cell that is part of a root tip. NMDCO_relaxed.owl PO:0030024 biolink:NamedThing vascular shoot axis meristematic apical cell A shoot axis meristematic apical cell at the tip of a shoot apex in a shoot system that has as part vascular tissue. NMDCO_relaxed.owl PO:0025287 biolink:NamedThing seedling coleoptile A coleoptile (PO:0020033) that is part of a whole plant (PO:0000003) in the seedling development stage (PO:0007131). NMDCO_relaxed.owl PO:0025289 biolink:NamedThing seedling coleorhiza A coleorhiza (PO:0020034) that is part of a whole plant (PO:0000003) in the seedling development stage (PO:0007131). NMDCO_relaxed.owl PO:0025291 biolink:NamedThing seedling hypocotyl A hypocotyl (PO:0020100) that is part of a whole plant (PO:0000003) in the seedling development stage (PO:0007131). NMDCO_relaxed.owl PO:0025293 biolink:NamedThing seedling epicotyl An epicotyl (PO:0020035) that is part of a whole plant (PO:0000003) in the seedling development stage (PO:0007131). NMDCO_relaxed.owl PO:0025295 biolink:NamedThing seedling mesocotyl A mesocotyl (PO:0020037) that develops from an embryo mesocotyl (PO:0025294). NMDCO_relaxed.owl PO:0025297 biolink:NamedThing seedling radicle A radicle (PO:0020031) that is part of a whole plant (PO:0000003) in the seedling development stage (PO:0007131). NMDCO_relaxed.owl PO:0025301 biolink:NamedThing seedling hypocotyl-root junction A hypocotyl-root junction (PO:0004724) that develops from an embryo hypocotyl-root junction (PO:0025300) . NMDCO_relaxed.owl PO:0025305 biolink:NamedThing microspore-derived cultured plant embryo A cultured somatic plant embryo that develops from isolated microspores. NMDCO_relaxed.owl PO:0025308 biolink:NamedThing megasporangium wall A sporangium wall that is part of a megasporangium. NMDCO_relaxed.owl PO:0025310 biolink:NamedThing megasporangium endothecium A sporangium wall endothecium (PO:0030049) that is part of a megasporangium wall. NMDCO_relaxed.owl PO:0025315 biolink:NamedThing megasporangium tapetum A tapetum (PO:0025313) that is part of a megasporangium wall (PO:0025308). NMDCO_relaxed.owl PO:0025316 biolink:NamedThing axillary hair A multicellular trichome (PO:0025162) that has as parts a long terminal cell atop a basal stalk and grows in a leaf axil (PO:0009023). NMDCO_relaxed.owl PO:0030070 biolink:NamedThing paraphysis A slender, usually uniseriate multicellular trichome (PO:0025162) that grows intermixed with the gametangia. NMDCO_relaxed.owl PO:0025320 biolink:NamedThing cotyledonary node rhizoid An epidermal rhizoid that grows form a cotyledonary node. NMDCO_relaxed.owl PO:0030071 biolink:NamedThing epidermal rhizoid A rhizoid (PO:0030078) that develops from an epidermal rhizoid initial cell (PO:0030068). NMDCO_relaxed.owl PO:0025324 biolink:NamedThing banner petal A petal (PO:0009032) that is the top-most petal of a papilionaceous corolla (PO:0009059). NMDCO_relaxed.owl PO:0025325 biolink:NamedThing wing petal One of two lateral petals (PO:0009032) that is adjacent to the banner petal of a papilionaceous corolla (PO:0009059). NMDCO_relaxed.owl PO:0025326 biolink:NamedThing keel petal A petal (PO:0009032) that is one of the two lowest petals of a papilionaceous corolla (PO:0025324). NMDCO_relaxed.owl PO:0025569 biolink:NamedThing free petal A petal (PO:0009032) that is part of a perianth (PO:0009058) that contains fused sepals (PO:0025584) and/or fused petals (PO:0025583), but is separate from the other sepals (PO:0009031) and petals (PO:0009032). NMDCO_relaxed.owl PO:0025583 biolink:NamedThing fused petal A petal (PO:0009032) that is part of a fused corolla (PO:0025581) or a fused perianth (PO:0025580). NMDCO_relaxed.owl PO:0025329 biolink:NamedThing calyptra calyx A fused calyx (PO:0025582) that is composed of fused sepals (PO:0025584). NMDCO_relaxed.owl PO:0025582 biolink:NamedThing fused calyx A calyx (PO:0009060) that is composed of fused sepals (PO:0025584). NMDCO_relaxed.owl PO:0025330 biolink:NamedThing calyptra corolla A fused corolla (PO:0025581) that is composed of fused petals (PO:0025583). NMDCO_relaxed.owl PO:0025581 biolink:NamedThing fused corolla A corolla (PO:0009059) that is composed of fused petals (PO:0025583). NMDCO_relaxed.owl PO:0025333 biolink:NamedThing ensiform vascular leaf A unifacial leaf that is flat in cross section due to a lamina that develops in a median plane (perpendicular to the axis), rather a transverse plane (tangent to the axis) throughout all of part of the length of the leaf. NMDCO_relaxed.owl PO:0025334 biolink:NamedThing terete vascular leaf A unifacial leaf that is round in cross section throughout all of part of the length of the leaf. NMDCO_relaxed.owl PO:0025336 biolink:NamedThing transition phyllode leaf A transition vascular leaf in which the basal portion of the leaf has unifacial lamina development in a median plane, similar to a phyllode, and the apical portion of the leaf develops leaflets similar to a juvenile leaf. NMDCO_relaxed.owl PO:0025337 biolink:NamedThing life of whole plant stage A maximal whole plant development stage. NMDCO_relaxed.owl PO:0025344 biolink:NamedThing gametophore reproductive whole plant development stage A gametophyte reproductive stage (PO:0025341) in which a gametophore (PO:0030018) and gametangium is being produced. NMDCO_relaxed.owl PO:0025346 biolink:NamedThing thallus reproductive whole plant development stage A gametophyte reproductive development stage in which a thallus and gametangium is being produced. NMDCO_relaxed.owl PO:0025345 biolink:NamedThing gametophore vegetative whole plant development stage A gametophyte vegetative whole plant development stage during which a gametophore is being produced but no gametangia are being produced. NMDCO_relaxed.owl PO:0025347 biolink:NamedThing thallus vegetative whole plant development stage A gametophyte vegetative whole plant development stage during which a thallus is being produced but no gametangia are being produced. NMDCO_relaxed.owl PO:0030006 biolink:NamedThing protonema whole plant development stage A gametophyte development stage during which a gametophyte undergoes filamentous growth and that succeeds spore germination and precedes a thalloid development stage (planar growth) or gametophore development stage. NMDCO_relaxed.owl PO:0025352 biolink:NamedThing tubercle An enlarged leaf base (PO:0020040) that is fused with adjacent shoot axis (PO:0025029) tissue. NMDCO_relaxed.owl PO:0025357 biolink:NamedThing pneumatophore A lateral root (PO:0020121) that is erect and protrudes above the surface of the soil or water. NMDCO_relaxed.owl PO:0025358 biolink:NamedThing pneumatorhiza A small lateral root that grows from a prop root and has a mealy surface texture. NMDCO_relaxed.owl PO:0025494 biolink:NamedThing pericyclic lateral root A lateral root (PO:0025495) that develops from a pericyclic lateral root primordium (PO:0025492). NMDCO_relaxed.owl PO:0025495 biolink:NamedThing non-pericyclic lateral root A lateral root (PO:0025495) that develops from a non-pericyclic lateral root primordium (PO:0025493). NMDCO_relaxed.owl PO:0030088 biolink:NamedThing lateral root spine A lateral root (PO:0020121) that is sclerified and pointed. NMDCO_relaxed.owl PO:0025362 biolink:NamedThing leaflet tendril A leaflet that is slender and coiling and lacks a lamina. NMDCO_relaxed.owl PO:0025363 biolink:NamedThing leaf apex tendril A leaf apex of a laminar vascular leaf that is slender and coiling. NMDCO_relaxed.owl PO:0025366 biolink:NamedThing leaf rachis tendril A leaf rachis (PO:0020055) that is slender and coiling and lacks a lamina. NMDCO_relaxed.owl PO:0025370 biolink:NamedThing seed trichome initiation stage A seed trichome development stage which occurs during the interval between the onset of seed trichome initiation and the onset of seed trichome elongation. NMDCO_relaxed.owl PO:0025371 biolink:NamedThing seed trichome elongation stage A seed trichome development stage which occurs during the interval between the onset of seed trichome elongation and the onset of seed trichome secondary wall biosynthesis. NMDCO_relaxed.owl PO:0025372 biolink:NamedThing seed trichome secondary wall biosynthesis stage A seed trichome development stage which occurs during the interval between the onset of seed trichome secondary wall biosynthesis and the onset of seed trichome maturation. NMDCO_relaxed.owl PO:0025373 biolink:NamedThing seed trichome maturation stage A seed trichome development stage which encompasses the process of seed trichome maturation. NMDCO_relaxed.owl PO:0025376 biolink:NamedThing plant spore dormant stage A gametophyte dormant stage during which a spore participates in a dormancy process. NMDCO_relaxed.owl PO:0025377 biolink:NamedThing plant embryo dormant stage A mature plant embryo stage (PO:0001081) during the interval between when a plant embryo (PO:0009009) begins a dormancy process (GO:0022611) and one of the following: the beginning of the seed germination stage (PO:0007057) in seed plants, formation of the first vascular leaf (PO:0009025) in pteridophytes, the beginning of development of a sporangium (PO:0025094) in bryophytes, or the beginning of the formation of a plant organ (PO:0009008) such as a root (PO:0009005), shoot axis (PO:0025029), or vascular leaf (PO:0009025) in a cultured plant embryo (PO:0000010). NMDCO_relaxed.owl PO:0025380 biolink:NamedThing leaf mesophyll intercellular space An intercellular space that is part of a leaf mesophyll. NMDCO_relaxed.owl PO:0025382 biolink:NamedThing substomatal cavity An intercellular space that is located directly below and contiguous with a stomatal pore. NMDCO_relaxed.owl PO:0025381 biolink:NamedThing spongy mesophyll intercellular space A leaf mesophyll intercellular space that is part of a spongy mesophyll. NMDCO_relaxed.owl PO:0025397 biolink:NamedThing palisade mesophyll intercellular space A leaf mesophyll intercellular space that is part of a palisade mesophyll. NMDCO_relaxed.owl PO:0025399 biolink:NamedThing leaf substomatal cavity A phyllome substomatal cavity that is part of a leaf mesophyll. NMDCO_relaxed.owl PO:0025384 biolink:NamedThing leaf sinus A phyllome sinus that is a marginal embayment, incision or indentation between marginal projections of any sort, typically lobes, teeth, or the base of cordate leaves. NMDCO_relaxed.owl PO:0025388 biolink:NamedThing epicuticular wax A portion of cuticular wax (PO:0025386) that forms crystalloids or a smooth film on the exterior of a plant cuticle (PO:0000022). NMDCO_relaxed.owl PO:0025389 biolink:NamedThing intercuticular wax A portion of cuticular wax (PO:0025386) that is an amorphous mixture of lipids embedded in the cutin (PO:0025385) of a plant cuticle proper (PO:0025387). NMDCO_relaxed.owl PO:0025392 biolink:NamedThing leaf lamina areole A phyllome lamina areole (PO:0025391) that is part of a leaf lamina (PO:0020039) and is completely surrounded by leaf lamina veins (PO:0020138) and cannot be divided into any smaller parts that are completely surrounded by leaf lamina veins. NMDCO_relaxed.owl PO:0025398 biolink:NamedThing phyllome substomatal cavity A substomatal cavity that is part of a phyllome. NMDCO_relaxed.owl PO:0025401 biolink:NamedThing vascular leaf adaxial meristem A portion of phyllome adaxial meristem (PO:0025400) tissue that is found on the adaxial side of a developing vascular leaf (PO:0009025). NMDCO_relaxed.owl PO:0025403 biolink:NamedThing vascular leaf abaxial meristem A portion of phyllome abaxial meristem (PO:0025402) tissue that is found on the abaxial side of a developing vascular leaf (PO:0009025). NMDCO_relaxed.owl PO:0025405 biolink:NamedThing leaf marginal meristem A portion of phyllome marginal meristem (PO:0025404) tissue that is part of a leaf margin (PO:0025009) of a vascular leaf (PO:0009025) during a leaf expansion stage (PO:0001052) and has parts marginal and submarginal initials. NMDCO_relaxed.owl PO:0025418 biolink:NamedThing sclerid cell A sclerenchyma cell (PO:0000077) with many pits in the secondary cell wall. NMDCO_relaxed.owl PO:0025419 biolink:NamedThing septate fiber tracheid A fiber tracheid (PO:0000355) that has as parts one or more thin internal partitions or septa. NMDCO_relaxed.owl PO:0025420 biolink:NamedThing septate libriform fiber cell A libriform fiber cell (PO:0004520) that has as parts one or more thin internal partitions or septa. NMDCO_relaxed.owl PO:0025421 biolink:NamedThing septate phloem fiber cell A phloem fiber cell (PO:0004519) that has as parts one or more thin internal partitions or septa. NMDCO_relaxed.owl PO:0025424 biolink:NamedThing vascular tissue development stage A plant tissue development stage (PO:0025423) that has as primary participant a portion of vascular tissue (PO:0009015). NMDCO_relaxed.owl PO:0025425 biolink:NamedThing xylem development stage A vascular tissue development stage (PO:0025424) that has as primary participant a portion of xylem (PO:0005352) tissue. NMDCO_relaxed.owl PO:0025426 biolink:NamedThing phloem development stage A vascular tissue development stage (PO:0025424) that has as primary participant a portion of phloem (PO:0005417) tissue. NMDCO_relaxed.owl PO:0025427 biolink:NamedThing secondary xylem development stage A xylem development stage (PO:0025425) that has as primary participant a portion of secondary xylem (PO:0005848) tissue during the interval between the beginning of a cell division stage of secondary xylem (PO:0025463) and the death of the last living cell in the secondary xylem. NMDCO_relaxed.owl PO:0025429 biolink:NamedThing leaf plate meristem A phyllome plate meristem (PO:0025428) in the vascular leaf (PO:0009025). NMDCO_relaxed.owl PO:0025435 biolink:NamedThing shoot axis cork cambium A cork cambium (PO:0005599) that is part of a shoot axis (PO:0025029). NMDCO_relaxed.owl PO:0025436 biolink:NamedThing root cork cambium A cork cambium (PO:0005599) that is part of a root (PO:0009005). NMDCO_relaxed.owl PO:0025440 biolink:NamedThing shoot axis cambial zone A cambial zone that is part of a shoot axis (PO:0025029). NMDCO_relaxed.owl PO:0025441 biolink:NamedThing root cambial zone A cambial zone that is part of a root (PO:0009005). NMDCO_relaxed.owl PO:0025442 biolink:NamedThing stem secondary thickening meristem A secondary thickening meristem (PO:0025414) that is part of a stem (PO:0009047). NMDCO_relaxed.owl PO:0025443 biolink:NamedThing root secondary thickening meristem A secondary thickening meristem (PO:0025414) that is part of a root (PO:0009005). NMDCO_relaxed.owl PO:0025446 biolink:NamedThing primary xylem tracheid A tracheid (PO:0000301) that is part of a xylem tissue (PO:0005849). NMDCO_relaxed.owl PO:0025447 biolink:NamedThing secondary xylem tracheid A tracheid PO:0000301 that is part of a portion of secondary xylem tissue (PO:0005848). NMDCO_relaxed.owl PO:0025449 biolink:NamedThing secondary xylem vessel member A xylem vessel member (PO:0002003) that is part of a portion of secondary xylem tissue (PO:0005848). NMDCO_relaxed.owl PO:0025461 biolink:NamedThing early wood tracheary element A secondary xylem tracheary element (PO:0025445) that is part of a portion of early wood (PO:0004515). NMDCO_relaxed.owl PO:0025462 biolink:NamedThing late wood tracheary element A secondary xylem tracheary element (PO:0025445) that is part of a portion of late wood (PO:0004516). NMDCO_relaxed.owl PO:0025448 biolink:NamedThing primary xylem vessel member A xylem vessel member (PO:0002003) that is part of a primary xylem tissue (PO:0005849). NMDCO_relaxed.owl PO:0025450 biolink:NamedThing primary xylem vessel A xylem vessel (PO:0025417) that is part of a primary xylem tissue (PO:0005849). NMDCO_relaxed.owl PO:0025451 biolink:NamedThing secondary xylem vessel A xylem vessel (PO:0025417) that is part of a portion of secondary xylem tissue (PO:0005848). NMDCO_relaxed.owl PO:0025454 biolink:NamedThing primary phloem sieve cell A sieve cell (PO:0025415) that is part of a portion of primary phloem (PO:0006075). NMDCO_relaxed.owl PO:0025456 biolink:NamedThing secondary phloem sieve cell A sieve cell (PO:0025415) that is part of a portion of secondary phloem (PO:0005043). NMDCO_relaxed.owl PO:0025455 biolink:NamedThing primary phloem sieve tube element A sieve tube element (PO:0000289) that is part of a portion of primary phloem (PO:0006075). NMDCO_relaxed.owl PO:0025457 biolink:NamedThing secondary phloem sieve tube element A sieve tube element (PO:0000289) that is part of a portion of secondary phloem (PO:0005043). NMDCO_relaxed.owl PO:0025459 biolink:NamedThing ordinary companion cell A companion cell (PO:0000400) that lacks cell wall invaginations and has few or no plasmodesmata connecting it to adjacent mesophyll cells. NMDCO_relaxed.owl PO:0025460 biolink:NamedThing intermediary companion cell A companion cell (PO:0000400) that has dense cytoplasm, a small vacuole, proplastids rather than chloroplasts, and abundant and highly branched plasmodesmata linking it to adjacent mesophyll cells. NMDCO_relaxed.owl PO:0025463 biolink:NamedThing cell division stage of secondary xylem A secondary xylem development stage (PO:0025427) that occurs during the interval between the first and last cell division in a portion of secondary xylem tissue (PO:0005848), during which cells are produced by divisions of cambial initials (PO:0000295) or xylem mother cells. NMDCO_relaxed.owl PO:0025469 biolink:NamedThing cell differentiation stage of secondary xylem A secondary xylem development stage (PO:0025427) that occurs during the interval between the end of a cell division stage of secondary xylem (PO:0025463) and the death of the last living cell in the secondary xylem. NMDCO_relaxed.owl PO:0025464 biolink:NamedThing cell expansion stage of secondary xylem A cell differentiation stage of secondary xylem (PO:0025469) that occurs during the interval between the end of a cell division stage of secondary xylem (PO:0025463) and the onset of a secondary cell wall formation stage of secondary xylem (PO:0025465), during which the cells undergo cell growth (GO:0016049). NMDCO_relaxed.owl PO:0025465 biolink:NamedThing secondary cell wall formation stage of secondary xylem A cell differentiation stage of secondary xylem (PO:0025469) that occurs during the interval between the onset of secondary wall biogenesis (GO:0009834) of the cells in a portion of secondary xylem (PO:0005848) and the beginning of a cell death stage of secondary xylem (PO:0025466). NMDCO_relaxed.owl PO:0025466 biolink:NamedThing cell death stage of secondary xylem A cell differentiation stage of secondary xylem (PO:0025469) that occurs during the interval between the first cell death of a tracheary element (PO:0000290) or non-septate xylem fiber cell (PO:0000274) and the death of the last secondary xylem parenchyma cell (PO:0004525) or septate fiber cell (PO:0004521) in a portion of secondary xylem (PO:0005848). NMDCO_relaxed.owl PO:0025467 biolink:NamedThing tracheary element death stage of secondary xylem A cell death stage of secondary xylem (PO:0025466) that occurs during the interval between the first and last cell death of a tracheary element (PO:0000290) or non-septate xylem fiber cell (PO:0000274). NMDCO_relaxed.owl PO:0025468 biolink:NamedThing secondary xylem parenchyma cell death stage of secondary xylem A cell death stage of secondary xylem (PO:0025466) that occurs during the interval between the last cell death of a tracheary element (PO:0000290) or non-septate xylem fiber cell (PO:0000274) and the last cell death in a portion of secondary xylem (PO:0005848). NMDCO_relaxed.owl PO:0025470 biolink:NamedThing plant embryo cotyledon A cotyledon (PO:0020030) that is part of a plant embryo (PO:0009009). NMDCO_relaxed.owl PO:0025471 biolink:NamedThing seedling cotyledon A cotyledon (PO:0020030) that is part of a whole plant (PO:0000003) in the seedling development stage (PO:0007131). NMDCO_relaxed.owl PO:0025473 biolink:NamedThing compression wood A portion of reaction wood (PO:0025472) found on the lower side of a shoot axis (PO:0025029) that is or was angled away from vertical and that has as parts heavily lignified tracheids (PO:0000301) with a specialized S2 layer that contains more lignin and has a larger (more horizontal) microfibril angle. NMDCO_relaxed.owl PO:0025474 biolink:NamedThing tension wood A portion of reaction wood (PO:0025472) found on the upper side of a shoot axis (PO:0025029) that is or was angled away from vertical and that has as parts gelatinous fiber cells (PO:0025422). NMDCO_relaxed.owl PO:0025489 biolink:NamedThing inflorescence bract primordium A bract primordium (PO:0025128) is committed to the development of an inflorescence bract (PO:0009054). NMDCO_relaxed.owl PO:0025491 biolink:NamedThing ovuliferous scale ovule A plant ovule (PO:0020006) that is part of an ovuliferous scale (add). NMDCO_relaxed.owl PO:0025492 biolink:NamedThing pericyclic lateral root primordium A lateral root primordium (PO:0000016) that develops from a portion of pericycle tissue (PO:0006203) and is committed to the development of a pericyclic lateral root (PO:0025494). NMDCO_relaxed.owl PO:0025493 biolink:NamedThing non-pericyclic lateral root primordium A lateral root primordium (PO:0000016) that develops from a portion of plant tissue (PO:0009007) other than a pericycle (PO:0006203) and is committed to the development of a non-pericyclic lateral root (PO:0025495). NMDCO_relaxed.owl PO:0025501 biolink:NamedThing fruit formation stage A fruit development stage (PO:0001002) that begins with the formation of a plant zygote (PO:0000423) that is contained in the fruit (PO:0009001) being studied and ends when that fruit's fruit ripening stage (PO:0025502) begins. NMDCO_relaxed.owl PO:0025502 biolink:NamedThing fruit ripening stage A fruit development stage (PO:0001002) during which a single fruit (PO:0009001) participates in the process of fruit ripening (GO:0009835). NMDCO_relaxed.owl PO:0025503 biolink:NamedThing fruit initiation stage A fruit formation stage (PO:0025501) that begins with the formation of a plant zygote (PO:0000423) that is contained in the fruit (PO:0009001) being studied and ends when the plant cells (PO:0009002) in the fruit begin to divide or expand. NMDCO_relaxed.owl PO:0025504 biolink:NamedThing fruit size up to 10% stage A fruit formation stage (PO:0025501) that begins when the plant cells (PO:0009002) in a fruit (PO:0009001) begin to divide or expand, and ends when the fruit has reached 10% of its final size. NMDCO_relaxed.owl PO:0025505 biolink:NamedThing fruit size 10 to 30% stage A fruit formation stage (PO:0025501) that spans the interval when a fruit (PO:0009001) has reached 10% to 30% of its final size. NMDCO_relaxed.owl PO:0025506 biolink:NamedThing fruit size 30 to 50% stage A fruit formation stage (PO:0025501) that spans the interval when a fruit (PO:0009001) has reached 30 to 50% of its final size. NMDCO_relaxed.owl PO:0025507 biolink:NamedThing fruit size 50 to 70% stage A fruit formation stage (PO:0025501) that spans the interval when a fruit (PO:0009001) has reached 50 to 70% of its final size. NMDCO_relaxed.owl PO:0025508 biolink:NamedThing fruit size 70% to final size stage A fruit formation stage (PO:0025501) that spans begins when a fruit (PO:0009001) has reached 70% of its final size and ends when a fruit has reached its final size and a fruit ripening stage (PO:0025502) begins. NMDCO_relaxed.owl PO:0025517 biolink:NamedThing leaf lamina lobe A phyllome lobe (PO:0025514) that is a projection on a leaf lamina margin (PO:0025009) for which the corresponding leaf sinus (PO:0025384) extends one quarter or more of the distance to the center of the long axis of the leaf lamina (PO:0020039). NMDCO_relaxed.owl PO:0025518 biolink:NamedThing leaf lamina tooth A phyllome lamina tooth (PO:0025515) that is an angular projection on a leaf margin (PO:0020128) for which the corresponding leaf sinus (PO:0025384) extends less than one quarter of the distance to the center of the long axis of the leaf lamina (PO:0020039). NMDCO_relaxed.owl PO:0025519 biolink:NamedThing leaf lamina crena A phyllome lamina crena (PO:0025516) that is a rounded projection on a leaf margin (PO:0020128) for which the corresponding leaf sinus (PO:0025384) extends less than one quarter of the distance to the center of the long axis of the leaf lamina (PO:0020039). NMDCO_relaxed.owl PO:0025527 biolink:NamedThing shoot system development stage A collective plant organ structure development stage (PO:0025338) that begins with the onset of the plant organ development stage (PO:0025339) and ends with either gametophyte senescent stage (PO:0025343) or sporophyte senescent stage (PO:0007017) or death. NMDCO_relaxed.owl PO:0025528 biolink:NamedThing bud development stage A shoot system development stage (PO:0025527) that has as primary participant a bud (PO:0009006). NMDCO_relaxed.owl PO:0025532 biolink:NamedThing bud burst stage A shoot system development stage (PO:0025527) during which a shoot system (PO:0009006) emerges from the bud (PO:0009006). NMDCO_relaxed.owl PO:0025529 biolink:NamedThing bud dormancy stage A bud development stage (PO:0025528) during which a bud (PO:0009006) participates in a bud dormancy process (GO:0097207). NMDCO_relaxed.owl PO:0025531 biolink:NamedThing bud swell stage A bud development stage (PO:0025528) during which a bud (PO:0009006) enlarges due to growth of the shoot system (PO:0009006). NMDCO_relaxed.owl PO:0025536 biolink:NamedThing plant cuticle ridge A portion of plant cuticle (PO:000022) that forms a ridge, may be overlayed with epicuticular wax (PO:0025388). NMDCO_relaxed.owl PO:0025539 biolink:NamedThing xylem sap A plant sap (PO:0025538) that is an aqueous solution which may contain mineral elements, nutrients, and plant hormones, and is transported from the root system (PO:0025025) toward the leaves through the tracheary elements (PO:0000290) of the xylem. NMDCO_relaxed.owl PO:0025540 biolink:NamedThing phloem sap A plant sap (PO:0025538) that is an aqueous solution which may contain sugars, mineral elements, and plant hormones, and is transported through the phloem sieve elements (PO:0025406). NMDCO_relaxed.owl PO:0025544 biolink:NamedThing microsporangium tapetum cell A tapetum cell (PO:0025543) that is part of a microsporangium tapetum (PO:0025314). NMDCO_relaxed.owl PO:0025564 biolink:NamedThing megasporangium tapetum cell A tapetum cell (PO:0025543) that is part of a megasporangium tapetum (PO:0025315). NMDCO_relaxed.owl PO:0025545 biolink:NamedThing anther wall tapetum cell A microsporangium tapetum cell (PO:0025544) that is part of the anther wall tapetum (PO:0009071). NMDCO_relaxed.owl PO:0025546 biolink:NamedThing accessory paraclade A second order inflorescence axis (PO:0006321) borne in the same axil (PO:0025224) as an existing second order inflorescence axis. NMDCO_relaxed.owl PO:0025547 biolink:NamedThing cauline paraclade A second order inflorescence axis (PO:0006321) borne on an elongated first order inflorescence axis (PO:0025104). NMDCO_relaxed.owl PO:0025548 biolink:NamedThing rosette paraclade A second order inflorescence axis (PO:0006321) borne on a compacted first order inflorescence axis (PO:0025104), forming the rosette. NMDCO_relaxed.owl PO:0025551 biolink:NamedThing multicellular trichome apex A portion of plant tissue (PO:0009007) that is the apical most portion of a multicellular trichome (PO:0025162). NMDCO_relaxed.owl PO:0025552 biolink:NamedThing centarch protoxylem A portion of protoxylem (PO:0000272) tissue in which the maturation of primary xylem of the shoot system progresses centrifugally with the oldest elements (protoxylem) in the center of the axis. NMDCO_relaxed.owl PO:0025553 biolink:NamedThing mesarch protoxylem A portion of protoxylem (PO:0000272) tissue in which the maturation of primary xylem (PO:0005849) of the shoot system (PO:0009006) progresses both centripetally and centrifugally from the center. NMDCO_relaxed.owl PO:0025554 biolink:NamedThing exarch protoxylem A portion of protoxylem (PO:0000272) tissue in which the maturation of primary xylem (PO:0005849) progresses centripetally, the oldest elements (protoxylem) are farthest from the center of the plant axis (PO:0025004). NMDCO_relaxed.owl PO:0025557 biolink:NamedThing endarch protoxylem A portion of protoxylem (PO:0000272) tissue in which the maturation of primary xylem (PO:0005849) of the shoot system (PO:0009006) progresses centrifugally, with the oldest elements (protoxylem) towards the center of the plant axis (PO:0025004). NMDCO_relaxed.owl PO:0025555 biolink:NamedThing root system exarch protoxylem A portion of exarch protoxylem (PO:002554) tissue in which the maturation of primary xylem (PO:0005849) of the root system (PO:0025025) progresses centripedally, with the oldest elements (protoxylem) farthest from the center of the plant axis (PO:0025004). NMDCO_relaxed.owl PO:0025556 biolink:NamedThing shoot system exarch protoxylem A portion of exarch protoxylem (PO:002554) tissue in which the maturation of primary xylem (PO:0005849) of the shoot system (PO:0009006) progresses centripetally, with the oldest elements (protoxylem) farthest from the center of the plant axis (PO:0025004). NMDCO_relaxed.owl PO:0025558 biolink:NamedThing monarch protoxylem A portion of root exarch protoxylem (PO:0025555) tissue in which the primary xylem (PO:0005849) of the root system (PO:0025025) has only one protoxylem strand or pole, and differentiation progresses centripetally, with the oldest element (protoxylem) farthest from the center of the plant axis (PO:0025004). NMDCO_relaxed.owl PO:0025559 biolink:NamedThing diarch protoxylem A portion of root exarch protoxylem (PO:0025555) tissue in which the primary xylem (PO:0005849) of the root system (PO:0025025) has two protoxylem strands or poles, and differentiation progresses centripetally, with the oldest elements (protoxylem) farthest from the center of the plant axis (PO:0025004). NMDCO_relaxed.owl PO:0025560 biolink:NamedThing triarch protoxylem A portion of root exarch protoxylem (PO:0025555) tissue in which the primary xylem (PO:0005849) of the root system (PO:0025025) has three protoxylem strands or poles, and differentiation progresses centripetally, with the oldest elements (protoxylem) farthest from the center of the plant axis (PO:0025004). NMDCO_relaxed.owl PO:0025561 biolink:NamedThing tetrarch protoxylem A portion of root exarch protoxylem (PO:0025555) tissue in which the primary xylem (PO:0005849) of the root system (PO:0025025) has four protoxylem strands or poles, and differentiation progresses centripetally, with the oldest elements (protoxylem) farthest from the center of the plant axis (PO:0025004). NMDCO_relaxed.owl PO:0025562 biolink:NamedThing pentarch protoxylem A portion of root exarch protoxylem (PO:0025555) tissue in which the primary xylem (PO:0005849) of the root system (PO:0025025) has five protoxylem strands or poles, and differentiation progresses centripetally, with the oldest elements (protoxylem) farthest from the center of the plant axis (PO:0025004). NMDCO_relaxed.owl PO:0025563 biolink:NamedThing polyarch protoxylem A portion of root exarch protoxylem (PO:0025555) tissue in which the primary xylem (PO:0005849) of the root system (PO:0025025) has more than five protoxylem strands or poles, and differentiation progresses centripetally, with the oldest elements (protoxylem) farthest from the center of the plant axis (PO:0025004). NMDCO_relaxed.owl PO:0025565 biolink:NamedThing shoot system xylem sap A xylem sap (PO:0025539) that is located in the shoot system (PO:0009006). NMDCO_relaxed.owl PO:0025568 biolink:NamedThing root system xylem sap A xylem sap (PO:0025539) that is located in the root system (PO:0025025). NMDCO_relaxed.owl PO:0025566 biolink:NamedThing shoot system phloem sap A phloem sap (PO:0025540) that is located in the shoot system (PO:0009006). NMDCO_relaxed.owl PO:0025567 biolink:NamedThing root system phloem sap A phloem sap (PO:0025540) that is located in the root system (PO:0025025). NMDCO_relaxed.owl PO:0025573 biolink:NamedThing non-vascular leaf development stage A leaf development stage (PO:0001050) that has as a primary participant a non-vascular leaf (PO:0025075). NMDCO_relaxed.owl PO:0025575 biolink:NamedThing protoxylem tracheary element A primary xylem tracheary element (PO:0025444) with predominately annular or helical secondary wall thickening that are the first formed tracheary elements (PO:0000290) at a particular location. NMDCO_relaxed.owl PO:0025576 biolink:NamedThing metaxylem tracheary element A primary xylem tracheary element (PO:0025444) that may have helical, scalariform, reticulate and/or pitted secondary wall thickening. NMDCO_relaxed.owl PO:0025584 biolink:NamedThing fused sepal A sepal (PO:0009031) that is part of the fused calyx (PO:0025582) or a fused perianth (PO:0025580). NMDCO_relaxed.owl PO:0025587 biolink:NamedThing free sepal A sepal (PO:0009031) that is part of a perianth (PO:0009058) that contains fused sepals (PO:0025584) and/or fused petals (PO:0025583), but is separate from the other sepals (PO:0009031) and petals (PO:0009032). NMDCO_relaxed.owl PO:0025589 biolink:NamedThing leaf lamina tip A leaf tip (PO:0025142) that is the distal portion of the leaf lamina (PO:0020039). NMDCO_relaxed.owl PO:0025592 biolink:NamedThing vascular leaf founder cell A phyllome founder cell (PO:0025586) that is part of a vascular leaf anlagen (PO:0025431). NMDCO_relaxed.owl PO:0025595 biolink:NamedThing shoot system ground meristem A ground meristem (PO:0025594) that gives rise to a portion of ground tissue (PO:0025059) in the shoot system (PO:0009006). NMDCO_relaxed.owl PO:0025596 biolink:NamedThing root system ground meristem A ground meristem (PO:0025594) that gives rise to a portion of ground tissue (PO:0025059) in the root system (PO:0025025). NMDCO_relaxed.owl PO:0025597 biolink:NamedThing ear infructescence An infructescence (PO:0006342) in Zea species that bears kernels (i.e. caryopsis fruit; PO:0030104) on a compact ear infructescence axis (PO:0025623) and develops from the ear inflorescence (PO:0020136). NMDCO_relaxed.owl PO:0030115 biolink:NamedThing raceme inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616), is composed of pedicellate flowers (PO:0009046) on an indeterminate, first order inflorescence axis (PO:0025104). NMDCO_relaxed.owl PO:0030116 biolink:NamedThing compound raceme inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616), is composed of an indeterminate, first order inflorescence axis (PO:0025104) and pedicellate flowers (PO:0009046) on indeterminate higher order inflorescence axes (PO:0009081). NMDCO_relaxed.owl PO:0030117 biolink:NamedThing spike inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616), is composed of sessile flowers (PO:0009046) on an indeterminate, first order inflorescence axis (PO:0025104). NMDCO_relaxed.owl PO:0030118 biolink:NamedThing compound spike inflorescence An inflorescence (PO:0009049), with a monopodial growth habit, which at anthesis is composed of an indeterminate first order inflorescence axis (PO:0025104) and sessile (PATO:0001436) flowers (PO:0009046), or spikelets (PO:0009051), on indeterminate higher order inflorescence axes (PO:0009081). NMDCO_relaxed.owl PO:0030119 biolink:NamedThing catkin inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616) is composed of indeterminate, first order inflorescence axes (PO:0025104) and sessile, unisexual flowers (PO:0009046) that are each subtended by conspicuous inflorescence bracts (PO:0009054). NMDCO_relaxed.owl PO:0030120 biolink:NamedThing spadix inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616), is composed of sessile flowers (PO:0009046) on a radially-enlarged, indeterminate, first order inflorescence axis (PO:0025104), and a basal, enveloping inflorescence bract (PO:0009054). NMDCO_relaxed.owl PO:0030121 biolink:NamedThing capitulum inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616) is composed of a radially-enlarged, determinate, first order inflorescence axis (PO:0025104) with sessile flowers (PO:0009046). NMDCO_relaxed.owl PO:0030122 biolink:NamedThing compound capitulum inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616) is composed of a radially-enlarged inflorescence axis (PO:0020122), and sessile flowers (PO:0009046) on determinate higher order inflorescence axes (PO:0009081) with basal involucral bracts (PO:0009045). NMDCO_relaxed.owl PO:0030123 biolink:NamedThing panicle inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616) is composed of pedicellate flowers (PO:0009046) or spikelets (PO:0009051) on determinate inflorescence axes (PO:0020122)., NMDCO_relaxed.owl PO:0030124 biolink:NamedThing corymb inflorescence An inflorescence (PO:0009049) with both monopodial and sympodial growth habits, which at flowering stage (PO:0007616), is composed of a determinate, first order inflorescence axis (PO:0025104), and determinate higher order inflorescence axes (PO:0020122) with pedicellate flowers (PO:0009046) that collectively form a convex plane of flowers. NMDCO_relaxed.owl PO:0030125 biolink:NamedThing anthela inflorescence An inflorescence (PO:0009049) with both monopodial and sympodial growth habits, which at flowering stage (PO:0007616), is composed of a determinate, first order inflorescence axis (PO:0025104) and determinate, higher order inflorescence axes (PO:0020122) with pedicellate flowers (PO:0009046) that collectively form a concave plane of flowers. NMDCO_relaxed.owl PO:0030126 biolink:NamedThing cyme inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616), is composed of a determinate, first order inflorescence axis (PO:0025104) and pedicellate flowers (PO:0009046) on paired, determinate higher order inflorescence axes (PO:0009081). NMDCO_relaxed.owl PO:0030127 biolink:NamedThing indeterminate thyrse inflorescence An inflorescence (PO:0009049) which at flowering stage (PO:0007616), is composed of an indeterminate, first order inflorescence axis (PO:0025104) and dichasial second order inflorescences (PO:0025240) with pedicellate flowers (PO:0009046), and determinate higher order inflorescence axes (PO:0009081). NMDCO_relaxed.owl PO:0030128 biolink:NamedThing determinate thyrse inflorescence An inflorescence (PO:0009049) which at flowering stage (PO:0007616) is composed of a determinate, first order inflorescence axis (PO:0025104) and dichasial second order inflorescences with pedicellate flowers (PO:0009046) and determinate, higher order inflorescence axes (PO:0009081). NMDCO_relaxed.owl PO:0030129 biolink:NamedThing umbel inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616), is composed of pedicellate flowers (PO:0009046) on a first order inflorescence axis (PO:0025104) with compressed inflorescence axis internodes (PO:0006326). NMDCO_relaxed.owl PO:0030130 biolink:NamedThing compound umbel inflorescence An inflorescence (PO:0009049) with a monopodial growth habit, which at flowering stage (PO:0007616), is composed of a first order inflorescence axis (PO:0025104) with compressed inflorescence axis internodes (PO:0006326), and pedicellate flowers (PO:0009046) on higher order inflorescence axes, with compressed inflorescence axis internodes (PO:0006326). NMDCO_relaxed.owl PO:0030131 biolink:NamedThing rhipidium inflorescence An inflorescence (PO:0009049) with a sympodial growth habit, which at flowering stage (PO:0007616), is composed of determinate inflorescence axes (PO:0020122) that bear pedicellate flowers (PO:0009046) in a single plane, with the latest-developing flowers on the highest order inflorescence axis, found at the center of the inflorescence. NMDCO_relaxed.owl PO:0030132 biolink:NamedThing cincinnus inflorescence An inflorescence (PO:0009049) with a sympodial growth habit, which at flowering stage (PO:0007616), is composed of determinate inflorescence axes (PO:0020122) with pedicellate flowers (PO:0009046), with the latest-developing flowers on the highest order inflorescence axis. NMDCO_relaxed.owl PO:0030133 biolink:NamedThing compound cincinnus inflorescence An inflorescence (PO:0009049) with sympodial and monopodial growth habits, which at flowering stage (PO:0007616), is composed of determinate inflorescence axes (PO:0020122) with pedicellate flowers (PO:0009046), with the latest-developing flowers on the highest order inflorescence axes of the second order inflorescences (PO:0025240). NMDCO_relaxed.owl PO:0030134 biolink:NamedThing bostryx inflorescence An inflorescence (PO:0009049) with a sympodial growth habit, which at flowering stage (PO:0007616), is composed of pedicellate flowers (PO:0009046) on determinate inflorescence axes (PO:0020122), each of which develop at a branch angle of approximately 90 degrees from each higher inflorescence axis (PO:0009081). NMDCO_relaxed.owl PO:0030135 biolink:NamedThing drepanium inflorescence An inflorescence (PO:0009049) with a sympodial growth habit, which at flowering stage (PO:0007616), is composed of pedicellate flowers (PO:0009046) on determinate inflorescence axes (PO:0020122), each of which develops at progressively more acute angles from each higher inflorescence axis (PO:0009081). NMDCO_relaxed.owl PO:0030136 biolink:NamedThing compound drepanium inflorescence An inflorescence (PO:0009049) with both sympodial and monopodial growth habits, which at flowering stage (PO:0007616) is composed of pedicellate flowers (PO:0009046) on determinate inflorescence axes (PO:0020122), each of which develops at progressively more acute angles from each higher inflorescence axis (PO:0009081). NMDCO_relaxed.owl PO:0025610 biolink:NamedThing stem hypodermis A portion of hypodermis (PO:0005051) that is part of a stem cortex (PO:0025612). NMDCO_relaxed.owl PO:0025611 biolink:NamedThing stem tegument layer A portion of shoot axis tegument layer (PO:0025609) that a tough, protective outer layer on a stem (PO:0009047) and includes as parts a stem hypodermis (PO:0025610) and a stem epidermis (PO:0025178). NMDCO_relaxed.owl PO:0025612 biolink:NamedThing stem cortex A portion of shoot axis cortex (PO:0000223) that is part of a stem (PO:0009047). NMDCO_relaxed.owl PO:0025613 biolink:NamedThing spine petiole A petiole (PO:0020038) that is sclerified and persistent. NMDCO_relaxed.owl PO:0025615 biolink:NamedThing rosette A collective leaf structure (PO:0025022) consisting of a group of rosette leaves (PO:0000014), generally borne at the base of the plant, that are separated by very short stem internodes (PO:0020142). NMDCO_relaxed.owl PO:0025620 biolink:NamedThing metaxylem vessel A primary xylem vessel (PO:0025450) which is part of the metaxylem (PO:0000372). NMDCO_relaxed.owl PO:0025621 biolink:NamedThing metaxylem tracheid A primary xylem tracheid (PO:0025446) that is part of the metaxylem (PO:0000372). NMDCO_relaxed.owl PO:0025622 biolink:NamedThing metaxylem vessel member A primary xylem vessel member (PO:0025448) that is part of the metaxylem (PO:0000372). NMDCO_relaxed.owl PO:0025623 biolink:NamedThing ear infructescence axis A first order infructescence axis (PO:0025244) in an ear infructescence (PO:0025597) that bears kernels (i.e. caryopsis fruit; PO:0030104). NMDCO_relaxed.owl PO:0030004 biolink:NamedThing chloronema A portion of protonema tissue that consists of only chloronema cells. NMDCO_relaxed.owl PO:0030005 biolink:NamedThing caulonema A portion of protonema tissue that consists of only caulonema cells. NMDCO_relaxed.owl PO:0030009 biolink:NamedThing shoot meristematic apical cell A meristematic apical cell that is part of a shoot system. NMDCO_relaxed.owl PO:0030014 biolink:NamedThing gametophyte meristematic apical cell An apical cell that is part of a whole plant in the gametophytic phase. NMDCO_relaxed.owl PO:0030010 biolink:NamedThing shoot axis meristematic apical cell A shoot meristematic apical cell that is part of a shoot apex. NMDCO_relaxed.owl PO:0030011 biolink:NamedThing leaf meristematic apical cell A shoot meristematic apical cell that is part of a leaf apex. NMDCO_relaxed.owl PO:0030019 biolink:NamedThing gametophore meristematic apical cell A shoot meristematic apical cell that is part of a gametophore. NMDCO_relaxed.owl PO:0030012 biolink:NamedThing vascular leaf meristematic apical cell A leaf meristematic apical cell that is part of the leaf apex of a vascular leaf. NMDCO_relaxed.owl PO:0030013 biolink:NamedThing non-vascular leaf meristematic apical cell A leaf meristematic apical cell (PO:0030011) that is part of a leaf apex of a non-vascular leaf. NMDCO_relaxed.owl PO:0030023 biolink:NamedThing gametophore axis meristematic apical cell A shoot axis meristematic apical cell at the tip of a gametophore axis. NMDCO_relaxed.owl PO:0030016 biolink:NamedThing seta meristematic apical cell A shoot axis meristematic apical cell at the tip of a seta. NMDCO_relaxed.owl PO:0030022 biolink:NamedThing gametophore stem A stem that is part of a gametophore. NMDCO_relaxed.owl PO:0030055 biolink:NamedThing pseudopodium A gametophore axis that is a leafless extension of a gametophore stem or branch on which a sporophyte is borne. NMDCO_relaxed.owl PO:0030025 biolink:NamedThing thallus meristematic apical cell A gametophyte apical cell that is part of a thallus. NMDCO_relaxed.owl PO:0030046 biolink:NamedThing protonema meristematic apical cell A gametophyte meristematic apical cell that is part of a protonema. NMDCO_relaxed.owl PO:0030080 biolink:NamedThing rhizoid meristematic apical cell A gametophyte meristematic apical cell that is part of a rhizoid. NMDCO_relaxed.owl PO:0030060 biolink:NamedThing gametophore axillary hair An axillary hair that grows in a leaf axil of a non-vascular leaf. NMDCO_relaxed.owl PO:0030062 biolink:NamedThing gametophore axillary hair terminal cell An axillary hair terminal cell that is the long terminal cell of a gametophore axillary hair. NMDCO_relaxed.owl PO:0030063 biolink:NamedThing gametophore axillary hair base A axillary hair base that is the basal part of a gametophore axillary hair, below the gametophore axillary hair terminal cell. NMDCO_relaxed.owl PO:0030064 biolink:NamedThing gametophore axillary hair basal cell An axillary hair basal cell that is part of a gametophore axillary hair base. NMDCO_relaxed.owl PO:0030067 biolink:NamedThing protonema side branch initial cell An protonema sub-apical initial that gives rise to a branch of a protonema. NMDCO_relaxed.owl PO:0030083 biolink:NamedThing gametophore bud initial cell A protonema sub-apical initial hat gives rise to a gametophore bud. NMDCO_relaxed.owl PO:0030079 biolink:NamedThing protonemal rhizoid A rhizoid that is part of a protonema and develops from a protonemal side branch rhizoid initial. NMDCO_relaxed.owl PO:0030077 biolink:NamedThing protonemal side branch rhizoid initial cell A protonema side branch initial that gives rise to a protonemal rhizoid. NMDCO_relaxed.owl PO:0030081 biolink:NamedThing caulonema meristematic apical cell A protonema meristematic apical cell that is part of a caulonema. NMDCO_relaxed.owl PO:0030082 biolink:NamedThing chloronema meristematic apical cell A protonema meristematic apical cell that is part of a chloronema. NMDCO_relaxed.owl PO:0030090 biolink:NamedThing root periderm scar A portion of root periderm (PO:0005047) formed in response to a disruption of the root epidermis (PO:0006036). NMDCO_relaxed.owl PO:0030091 biolink:NamedThing capsule fruit A fruit (PO:0009001) which develops from a gynoecium (PO:0009062) and at maturity comprises a dry exocarp (PO:0009085), dry mesocarp (PO:0009087), and dry endocarp (PO:0009086) that usually dehisce. NMDCO_relaxed.owl PO:0030098 biolink:NamedThing schizocarp fruit A fruit (PO:0009001) which develops from a gynoecium (PO:0009062) and at maturity comprises a dry exocarp (PO:0009085), dry mesocarp (PO:0009087), and dry endocarp (PO:0009086) that separate into mericarps (PO:0020075). NMDCO_relaxed.owl PO:0030099 biolink:NamedThing samara fruit A fruit (PO:0009001) which develops from a carpel (PO:0009030) and at maturity comprises a dry exocarp (PO:0009085), dry mesocarp (PO:0009087), and dry endocarp (PO:0009086) that are elongated into a wing-like structure. NMDCO_relaxed.owl PO:0030100 biolink:NamedThing legume fruit A fruit (PO:0009001) which develops from a carpel (PO:0009030) and at maturity comprises a dry exocarp (PO:0009085), dry mesocarp (PO:0009087), and dry endocarp (PO:0009086) that dehisce along two fruit valves (PO:0000033). NMDCO_relaxed.owl PO:0030102 biolink:NamedThing nut fruit A fruit (PO:0009001) which develops from a gynoecium (PO:0009062) and at maturity comprises a dry exocarp (PO:0009085), dry mesocarp (PO:0009087), and dry endocarp (PO:0009086) that are not fused to a seed coat (PO:0009088). NMDCO_relaxed.owl PO:0030103 biolink:NamedThing drupe fruit A fruit (PO:0009001) which develops from a carpel (PO:0009030) and at maturity comprises a fleshy exocarp (PO:0009085), fleshy mesocarp (PO:0009087), and a stony endocarp (PO:0009086). NMDCO_relaxed.owl PO:0030104 biolink:NamedThing caryopsis fruit A fruit (PO:0009001) which develops from a gynoecium (PO:0009062) and at maturity comprises a dry exocarp (PO:0009085), dry mesocarp (PO:0009087), and dry endocarp (PO:0009086) that are fused to a seed coat (PO:0009088). NMDCO_relaxed.owl PO:0030105 biolink:NamedThing follicle fruit A fruit (PO:0009001) which develops from a carpel (PO:0009030) and at maturity comprises a dry exocarp (PO:0009085), dry mesocarp (PO:0009087), and dry endocarp (PO:0009086) that dehisce along a single fruit valve (PO:0000033). NMDCO_relaxed.owl PO:0030106 biolink:NamedThing silique fruit A fruit (PO:0009001) which develops from a gynoecium (PO:0009062) and at maturity comprises a dry exocarp (PO:0009085), dry mesocarp (PO:0009087), and dry endocarp (PO:0009086), that dehisce along two fruit valves (PO:0000033) and separate from a persistent fruit replum (PO:0025267). NMDCO_relaxed.owl PO:0030107 biolink:NamedThing achene fruit A fruit (PO:0009001) which develops from a carpel (PO:0009030) or gyneocium (PO:0009062) and at maturity comprises a dry exocarp (PO:0009085), a dry mesocarp (PO:0009087), and a dry endocarp (PO:0009086) that are connected to a seed coat (PO:0009088) by a funicle (PO:0020006). NMDCO_relaxed.owl PO:0030108 biolink:NamedThing berry fruit A fruit (PO:0009001) which at maturity comprises a fleshy endocarp (PO:0009086), fleshy mesocarp (PO:0009087), and fleshy exocarp (PO:0009085). NMDCO_relaxed.owl PO:0030092 biolink:NamedThing loculicidal capsule fruit A capsule fruit (PO:0030091) which at maturity dehisces through fruit locules (PO:0025270). NMDCO_relaxed.owl PO:0030093 biolink:NamedThing septicidal capsule fruit A capsule fruit (PO:0030091) which dehisces through a fruit septa (PO:0025268). NMDCO_relaxed.owl PO:0030094 biolink:NamedThing coccarium capsule fruit A capsule fruit (PO:0030091) which at maturity dehisces through both the fruit septa (PO:0025268) and the fruit locules (PO:0025270). NMDCO_relaxed.owl PO:0030095 biolink:NamedThing poricidal capsule fruit A capsule fruit (PO:0030091) which at maturity dehisces through pores on a pericarp (PO:0009084). NMDCO_relaxed.owl PO:0030096 biolink:NamedThing circumscissile capsule fruit A capsule fruit (PO:0030091) which at maturity dehisces through the release of a fruit operculum (PO:0025298). NMDCO_relaxed.owl PO:0030097 biolink:NamedThing utricle capsule fruit A circumscissile capsule fruit (PO:0030096) which at maturity contains one seed (PO:0009010) that is not attached to a pericarp (PO:0009084). NMDCO_relaxed.owl PO:0030101 biolink:NamedThing loment fruit A legume fruit (PO:0030100) which at maturity separates into indehiscent, one-seeded segments. NMDCO_relaxed.owl PO:0030109 biolink:NamedThing hesperidium fruit A berry fruit (PO:0030108) which develops from a superior gynoecium (PO:0009062) and at maturity comprises a thickened exocarp (PO:0009085), thickened mesocarp (PO:0009087), and endocarp (PO:0009086), and has as parts juice sacs (PO:0006013) on a carpel adaxial epidermis (PO:0025618). NMDCO_relaxed.owl PO:0030110 biolink:NamedThing pome fruit A berry fruit (PO:0030108) which develops from an inferior gynoecium (PO:0009062) and at maturity comprises a fleshy exocarp (PO:0009085), fleshy mesocarp (PO:0009087), and hardened endocarp (PO:0009086) and has as a part a fleshy hypanthium (PO:0009065) which is indistinct from the exocarp (PO:0009085). NMDCO_relaxed.owl PO:0030111 biolink:NamedThing pepo fruit A berry fruit (PO:0030108) which develops from an inferior carpel (PO:0009030) and at maturity comprises a fleshy exocarp (PO:0009085), fleshy mesocarp (PO:0009087), and fleshy endocarp (PO:0009086), and has as a part a hard receptacle (PO:0009064) which surrounds, and is indistinct from, the exocarp (PO:0009085). NMDCO_relaxed.owl PR:000001018 biolink:NamedThing CD3 subunit with immunoglobulin domain A protein that has a core domain composition consisting of an extracellular N-terminal domain that adopts an immunoglobulin fold, a transmembrane domain, and an intracellular C-terminal domain with a single copy of the Immunoreceptor tyrosine-based activation motif (Pfam:PF02189) (ITAM). It constitutes the invariant subunit of the T cell antigen receptor (TCR). TCR is a surface receptor on T cells responsible for recognizing MHC-restricted antigens and initiating the cellular immune response. NMDCO_relaxed.owl PR:000001022 biolink:NamedThing neural cell adhesion molecule A protein with a domain composition consisting of a large extracellular domain, including five Ig-like C2-type domains followed by two copies of the Fibronectin type-III domain (Pfam:PF00041), a single-pass transmembrane domain and a short cytoplasmic C-terminal domain. NMDCO_relaxed.owl PR:000001327 biolink:NamedThing cadherin A protein that has a core domain structure of signal sequence, propeptide, five Cadherin domains (Pfam:PF00028), a transmembrane region, and a Cadherin cytoplasmic region (Pfam:PF01049). Cadherins function as adhesion molecules that mediate Ca2+-dependent cell-cell adhesion in solid tissues. NMDCO_relaxed.owl PR:000001971 biolink:NamedThing vascular endothelial growth factor receptor A protein with core architecture consisting of a signal sequence, followed by 7 Ig-like domains (Pfam:PF00047, Pfam:PF07679, or Pfam:PF07686), a transmembrane region, and a cytoplasmic Protein tyrosine kinase domain. NMDCO_relaxed.owl PR:000002976 biolink:NamedThing Ly-6-like protein A protein that is the translation product of any of the LY6 genes (LY6A-LY6I). NMDCO_relaxed.owl PR:000007499 biolink:NamedThing fibroblast growth factor 8 A protein that is a translation product of the human FGF8 gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl PR:000014841 biolink:NamedThing sonic hedgehog protein A protein that is a translation product of the human SHH gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl PR:000025796 biolink:NamedThing integrin alpha A protein that is composed of a long N-terminal extracellular domain, a transmembrane domain and a short cytoplasmic C-terminal domain. The N-terminal domain contains beta-propeller repeats (interrupted by an A domain in a subset of integrins alpha), while the C-terminal domain contains a GFFxR motif. NMDCO_relaxed.owl PR:000029032 biolink:NamedThing Mus musculus protein A protein that is encoded in the genome of Mus musculus. NMDCO_relaxed.owl PR:000029067 biolink:NamedThing Homo sapiens protein A protein that is encoded in the genome of Homo sapiens. NMDCO_relaxed.owl PR:000036194 biolink:NamedThing eukaryotic protein A protein that is encoded in the genome of some Eukaryota. NMDCO_relaxed.owl PR:000045358 biolink:NamedThing insulin family protein A protein that is a translation product of a gene that encodes a standalone Insulin (Pfam:PF00049) domain preceded by a signal peptide. NMDCO_relaxed.owl PR:000001005 biolink:NamedThing integrin alpha with A domain An integrin alpha that contains an A domain. A hallmark of this class is the presence of a von Willebrand factor type A domain (Pfam:PF00092) (I-domain) of approximately 200 amino acid residues at the N terminus, which confers divalent cation binding properties. Unlike other integrin alpha proteins, they do not undergo proteolytic cleavage. NMDCO_relaxed.owl PR:000001023 biolink:NamedThing neural cell adhesion molecule NCAM A neural cell adhesion molecule that is involved in neuronal development, synaptic plasticity, and regeneration. NMDCO_relaxed.owl PR:P01731 biolink:NamedThing T-cell surface glycoprotein CD8 alpha chain (mouse) A T-cell surface glycoprotein CD8 alpha chain that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P05555 biolink:NamedThing integrin alpha-M (mouse) An integrin alpha-M that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P06332 biolink:NamedThing T-cell surface glycoprotein CD4 (mouse) A CD4 molecule that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P08920 biolink:NamedThing T-cell surface antigen CD2 (mouse) A CD2 molecule that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P10810 biolink:NamedThing monocyte differentiation antigen CD14 (mouse) A CD14 molecule that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P13379 biolink:NamedThing T-cell surface glycoprotein CD5 (mouse) A T-cell surface glycoprotein CD5 that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P13595 biolink:NamedThing neural cell adhesion molecule 1 (mouse) A neural cell adhesion molecule 1 that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P16872 biolink:NamedThing interleukin-7 receptor subunit alpha (mouse) An interleukin-7 receptor subunit alpha that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P19437 biolink:NamedThing B-lymphocyte antigen CD20 (mouse) A membrane-spanning 4-domains subfamily A member 1 that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P22091 biolink:NamedThing T-cell acute lymphocytic leukemia protein 1 homolog (mouse) A T-cell acute lymphocytic leukemia protein 1 that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P22646 biolink:NamedThing T-cell surface glycoprotein CD3 epsilon chain (mouse) A CD3 epsilon that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P25918 biolink:NamedThing B-lymphocyte antigen CD19 (mouse) A CD19 molecule that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P35461 biolink:NamedThing lymphocyte antigen 6G (mouse) A lymphocyte antigen 6G that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P35918 biolink:NamedThing vascular endothelial growth factor receptor 2 (mouse) A vascular endothelial growth factor receptor 2 that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P37237 biolink:NamedThing fibroblast growth factor 8 (mouse) A fibroblast growth factor 8 that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:P55284 biolink:NamedThing cadherin-5 (mouse) A cadherin-5 that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:Q62226 biolink:NamedThing sonic hedgehog protein (mouse) A sonic hedgehog protein that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:Q62351 biolink:NamedThing transferrin receptor protein 1 (mouse) A transferrin receptor protein 1 that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:Q64314 biolink:NamedThing hematopoietic progenitor cell antigen CD34 (mouse) A CD34 molecule that is encoded in the genome of mouse. NMDCO_relaxed.owl PR:000009054 biolink:NamedThing insulin gene translation product An insulin family protein that is a translation product of the human INS gene or a 1:1 ortholog thereof. NMDCO_relaxed.owl PR:P01308 biolink:NamedThing insulin gene translation product (human) An insulin gene translation product that is encoded in the genome of human. NMDCO_relaxed.owl PR:P01730 biolink:NamedThing T-cell surface glycoprotein CD4 (human) A CD4 molecule that is encoded in the genome of human. NMDCO_relaxed.owl PR:P01732 biolink:NamedThing T-cell surface glycoprotein CD8 alpha chain (human) A T-cell surface glycoprotein CD8 alpha chain that is encoded in the genome of human. NMDCO_relaxed.owl PR:P02786 biolink:NamedThing transferrin receptor protein 1 (human) A transferrin receptor protein 1 that is encoded in the genome of human. NMDCO_relaxed.owl PR:P06127 biolink:NamedThing T-cell surface glycoprotein CD5 (human) A T-cell surface glycoprotein CD5 that is encoded in the genome of human. NMDCO_relaxed.owl PR:P06729 biolink:NamedThing T-cell surface antigen CD2 (human) A CD2 molecule that is encoded in the genome of human. NMDCO_relaxed.owl PR:P07766 biolink:NamedThing T-cell surface glycoprotein CD3 epsilon chain (human) A CD3 epsilon that is encoded in the genome of human. NMDCO_relaxed.owl PR:P08571 biolink:NamedThing monocyte differentiation antigen CD14 (human) A CD14 molecule that is encoded in the genome of human. NMDCO_relaxed.owl PR:P11215 biolink:NamedThing integrin alpha-M (human) An integrin alpha-M that is encoded in the genome of human. NMDCO_relaxed.owl PR:P11836 biolink:NamedThing B-lymphocyte antigen CD20 (human) A membrane-spanning 4-domains subfamily A member 1 that is encoded in the genome of human. NMDCO_relaxed.owl PR:P13591 biolink:NamedThing neural cell adhesion molecule 1 (human) A neural cell adhesion molecule 1 that is encoded in the genome of human. NMDCO_relaxed.owl PR:P15391 biolink:NamedThing B-lymphocyte antigen CD19 (human) A CD19 molecule that is encoded in the genome of human. NMDCO_relaxed.owl PR:P16871 biolink:NamedThing interleukin-7 receptor subunit alpha (human) An interleukin-7 receptor subunit alpha that is encoded in the genome of human. NMDCO_relaxed.owl PR:P17542 biolink:NamedThing T-cell acute lymphocytic leukemia protein 1 (human) A T-cell acute lymphocytic leukemia protein 1 that is encoded in the genome of human. NMDCO_relaxed.owl PR:P28906 biolink:NamedThing hematopoietic progenitor cell antigen CD34 (human) A CD34 molecule that is encoded in the genome of human. NMDCO_relaxed.owl PR:P33151 biolink:NamedThing cadherin-5 (human) A cadherin-5 that is encoded in the genome of human. NMDCO_relaxed.owl PR:P35968 biolink:NamedThing vascular endothelial growth factor receptor 2 (human) A vascular endothelial growth factor receptor 2 that is encoded in the genome of human. NMDCO_relaxed.owl PR:P55075 biolink:NamedThing fibroblast growth factor 8 (human) A fibroblast growth factor 8 that is encoded in the genome of human. NMDCO_relaxed.owl PR:Q15465 biolink:NamedThing sonic hedgehog protein (human) A sonic hedgehog protein that is encoded in the genome of human. NMDCO_relaxed.owl RO:0002533 biolink:NamedThing sequence atomic unit Any individual unit of a collection of like units arranged in a linear order NMDCO_relaxed.owl RO:0002534 biolink:NamedThing sequence bearer Any entity that can be divided into parts such that each part is an atomical unit of a sequence NMDCO_relaxed.owl UBERON:0000005 biolink:NamedThing chemosensory organ NMDCO_relaxed.owl UBERON:0000020 biolink:NamedThing sense organ An organ that is capable of transducing sensory stimulus to the nervous system. NMDCO_relaxed.owl UBERON:0002536 biolink:NamedThing arthropod sensillum Sense organ embedded in the integument and consisting of one or a cluster of sensory neurons and associated sensory structures, support cells and glial cells forming a single organised unit with a largely bona-fide boundary.[FBbt]. NMDCO_relaxed.owl UBERON:0010521 biolink:NamedThing electroreceptor organ An organ that is capable of detecting electrical stimulus. NMDCO_relaxed.owl UBERON:6002639 biolink:NamedThing insect larval sense organ Any sense organ that is part of some larva. NMDCO_relaxed.owl UBERON:6007280 biolink:NamedThing insect embryonic/larval head sense organ Any sense organ (UBERON:6005155) that is part of some larval head (UBERON:6001730). NMDCO_relaxed.owl UBERON:0034922 biolink:NamedThing cell cluster A cluster of cells, largely surrounded by a morphological boundary. NMDCO_relaxed.owl UBERON:0000009 biolink:NamedThing submucosa A layer of dense irregular connective tissue that lines organs and supports the mucosa, as well as joins the mucosa to the bulk of underlying smooth muscle. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0004923 biolink:NamedThing organ component layer A part of a wall of an organ that forms a layer. NMDCO_relaxed.owl UBERON:0000030 biolink:NamedThing lamina propria A thin layer of loose connective tissue which lies beneath the epithelium and together with the epithelium constitutes the mucosa[WP]. The lamina propria contains capillaries and a central lacteal (lymph vessel) in the small intestine, as well as lymphoid tissue. Lamina propria also contains glands with the ducts opening on to the mucosal epithelium, that secrete mucus and serous secretions. NMDCO_relaxed.owl UBERON:0000158 biolink:NamedThing membranous layer NMDCO_relaxed.owl UBERON:0004123 biolink:NamedThing myocardial layer Any of the layers of the myocardium. Example: compact layer, trabecular layer. NMDCO_relaxed.owl UBERON:0005283 biolink:NamedThing tela choroidea A structure found in the walls of the ventricles of the brain, consisting of part of the meninges (pia mater in mammals) plus ependyma[cjm]. NMDCO_relaxed.owl UBERON:0005358 biolink:NamedThing ventricle of nervous system A layer in the central nervous system that lines system of communicating cavities in the brain and spinal cord. NMDCO_relaxed.owl UBERON:0006660 biolink:NamedThing muscular coat A region of muscle in many organs in the vertebrate body, adjacent to the submucosa membrane. It is responsible for gut movement such as peristalsis. NMDCO_relaxed.owl UBERON:0012375 biolink:NamedThing subserosa A layer of tissue between the muscularis and serosa. NMDCO_relaxed.owl UBERON:0013754 biolink:NamedThing integumentary system layer An organ component layer that is part of a integumental system. NMDCO_relaxed.owl UBERON:0018260 biolink:NamedThing layer of muscle tissue Any organ component layer that consists of muscle tissue. NMDCO_relaxed.owl UBERON:0034933 biolink:NamedThing layer of smooth muscle tissue Any organ component layer that consists of smooth muscle tissue. NMDCO_relaxed.owl UBERON:0011216 biolink:NamedThing organ system subdivision A subdivision of an anatomical system. NMDCO_relaxed.owl UBERON:0000013 biolink:NamedThing sympathetic nervous system The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [GO]. NMDCO_relaxed.owl UBERON:0000075 biolink:NamedThing subdivision of skeletal system Anatomical cluster consisting of the skeletal elements and articular elements that are part of an individual subdivision of the organism. NMDCO_relaxed.owl UBERON:0000383 biolink:NamedThing musculature of body The subdivision of the musculoskeletal system that consists of all the muscles of the body[VSAO, modified]. NMDCO_relaxed.owl UBERON:0001015 biolink:NamedThing musculature A subdivision of the muscular system corresponding to a subdisivision of an organism. NMDCO_relaxed.owl UBERON:0006558 biolink:NamedThing lymphatic part of lymphoid system An organ system subdivision that is a network of vessels capable of removing accumulating protein and fluid from the interstitial space and returning it to the vascular space. In some species, this network is connected to the immune system via lymph nodes and lymphocyte-producing organs, with the whole being the lymphoid system. NMDCO_relaxed.owl UBERON:0010191 biolink:NamedThing aortic system NMDCO_relaxed.owl UBERON:0010912 biolink:NamedThing subdivision of skeleton Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints. NMDCO_relaxed.owl UBERON:0034944 biolink:NamedThing zone of organ NMDCO_relaxed.owl UBERON:0004914 biolink:NamedThing duodenal papilla One of the two small elevations on the mucosa of the duodenum, the major at the entrance of the conjoined pancreatic and common bile ducts and the minor at the entrance of the accessory pancreatic duct. NMDCO_relaxed.owl UBERON:0009870 biolink:NamedThing zone of stomach A division of the stomach. The stomach can be divided based on mucosal histology (glandular epithelium and gastric glands) and the relative position and type of gastric gland. NMDCO_relaxed.owl UBERON:0010188 biolink:NamedThing protuberance A roughly circular bulge in a surface. NMDCO_relaxed.owl UBERON:0000015 biolink:NamedThing non-material anatomical boundary A non-material anatomical entity of two dimensions. Anatomical boundaries are contiguous structures. NMDCO_relaxed.owl UBERON:0000464 biolink:NamedThing anatomical space Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures. NMDCO_relaxed.owl UBERON:0006846 biolink:NamedThing surface groove A furrow or an incomplete tube. NMDCO_relaxed.owl UBERON:0010199 biolink:NamedThing bona-fide anatomical boundary An anatomical boundary that corresponds to some physical discontinuity. NMDCO_relaxed.owl UBERON:0000471 biolink:NamedThing compound organ component Multi-tissue structure that is part of a compound organ. NMDCO_relaxed.owl UBERON:0000409 biolink:NamedThing serous gland A gland in which the principal secretory cells are serous secreting cells. NMDCO_relaxed.owl UBERON:0005177 biolink:NamedThing trunk region element An organ or element that part of the trunk region. The trunk region can be further subdividied into thoracic (including chest and thoracic cavity) and abdominal (including abdomen and pelbis) regions. NMDCO_relaxed.owl UBERON:0001774 biolink:NamedThing skeletal muscle of trunk A skeletal muscle organ that is part of the trunk region. NMDCO_relaxed.owl UBERON:0002075 biolink:NamedThing viscus An organ that is located within the body cavity (or in its extension, in the scrotum); it consists of organ parts that are embryologically derived from endoderm, splanchnic mesoderm or intermediate mesoderm; together with other organs, the viscus constitutes the respiratory, gastrointestinal, urinary, reproductive and immune systems, or is the central organ of the cardiovascular system. Examples: heart, lung, esophagus, kidney, ovary, spleen. NMDCO_relaxed.owl UBERON:0003463 biolink:NamedThing trunk bone A bone that is part of a trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005173 biolink:NamedThing abdominal segment element An organ or element that is part of the adbominal segment of the organism. This region can be further subdivided into the abdominal cavity and the pelvic region. NMDCO_relaxed.owl UBERON:0005181 biolink:NamedThing thoracic segment organ An organ that part of the thoracic segment region. This region can be further subdividied chest and thoracic cavity regions. NMDCO_relaxed.owl UBERON:0000047 biolink:NamedThing simple eye An eye with one concave chamber. Note that 'simple' does not imply a reduced level of complexity or acuity. NMDCO_relaxed.owl UBERON:0000971 biolink:NamedThing ommatidium The smallest morphological and functional unit of the compound eye that consists of a usually limited and often constant number of rhabdomeric photoreceptor cells, cornea-secreting epithelial cells, and interommatidial pigment cells, and may additionally contain crystalline cone cells. NMDCO_relaxed.owl UBERON:0004548 biolink:NamedThing left eye An eye that is part of a left side of organism [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004549 biolink:NamedThing right eye An eye that is part of a right side of organism [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0015165 biolink:NamedThing multi-unit eye An eye consisting of multiple light-sensing organs. NMDCO_relaxed.owl UBERON:0001605 biolink:NamedThing ciliary muscle The ciliary muscle is a ring of smooth muscle in the middle layer of the eye that controls the eye's accommodation for viewing objects at varying distances and regulates the flow of aqueous humour through Schlemm's canal. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0001709 biolink:NamedThing upper jaw region Subdivision of head that consists of the upper jaw skeletal elements plus associated soft tissue (skin, lips, muscle)[cjm]. NMDCO_relaxed.owl UBERON:0001710 biolink:NamedThing lower jaw region Subdivision of head that consists of the lower jaw skeletal elements plus associated soft tissue (skin, lips, muscle)[cjm]. NMDCO_relaxed.owl UBERON:0001893 biolink:NamedThing telencephalon Part of the forebrain consisting of paired olfactory bulbs and cerebral hemispheres. NMDCO_relaxed.owl UBERON:0001894 biolink:NamedThing diencephalon The division of the forebrain that develops from the foremost primary cerebral vesicle. NMDCO_relaxed.owl UBERON:0002285 biolink:NamedThing telencephalic ventricle A brain ventricle that is part of a telencephalon. In mammals and species with an evaginated telencephalon, this is one of a pair of lateral structures, one in each hemisphere. NMDCO_relaxed.owl UBERON:0002307 biolink:NamedThing choroid plexus of lateral ventricle Part of choroid plexus contained in the lateral ventricle. NMDCO_relaxed.owl UBERON:0002539 biolink:NamedThing pharyngeal arch One of a series of paired bulges that develop along the lateral walls of the foregut. The pharyngeal arches have developmental contributions from endoderm, mesoderm, and neural crest cells and are separated by anterior lateral endoderm out-pockets known as pharyngeal pouches. NMDCO_relaxed.owl UBERON:0003129 biolink:NamedThing skull Anatomical structure that is part of the head consisting entirely of cranium and mandible[WP]. NMDCO_relaxed.owl UBERON:0003236 biolink:NamedThing epithelium of lower jaw An epithelium that is part of a lower jaw [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003324 biolink:NamedThing mesenchyme of lower jaw Mesenchyme that is part of a developing lower jaw [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004274 biolink:NamedThing lateral ventricle choroid plexus epithelium A choroid plexus epithelium that is part of a lateral ventricle [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004363 biolink:NamedThing pharyngeal arch artery One of a series of paired embryological vascular structures formed within a pharyngeal arch; in the adult, some of these vessels give rise to the great vessels[MP]. NMDCO_relaxed.owl UBERON:0006905 biolink:NamedThing mandibular process mesenchyme Mesenchyme that is part of a mandibular prominence. NMDCO_relaxed.owl UBERON:0009494 biolink:NamedThing pharyngeal arch mesenchymal region A portion of mesenchymal tissue associated with an individual pharyngeal arch. NMDCO_relaxed.owl UBERON:0009663 biolink:NamedThing telencephalic nucleus A nucleus of brain that is part of a telencephalon. NMDCO_relaxed.owl UBERON:0010046 biolink:NamedThing entire pharyngeal arch associated mesenchyme The sum total of mesenchymal tissue in the pharyngeal arch region. Pharyngeal mesenchyme is undifferentiated, loose connective tissue derived mostly from mesoderm, and also contains ectodermally derived neural crest cells. NMDCO_relaxed.owl UBERON:0011300 biolink:NamedThing gray matter of telencephalon A portion of gray matter that is part of a telencephalon. NMDCO_relaxed.owl UBERON:0011595 biolink:NamedThing jaw region A subdivision of the head that corresponds to the jaw skeleton, containing both soft tissue, skeleton and teeth (when present). The jaw region is divided into upper and lower regions. NMDCO_relaxed.owl UBERON:0036654 biolink:NamedThing wall of lateral ventricle NMDCO_relaxed.owl UBERON:0000220 biolink:NamedThing atlanto-occipital joint The Atlanto-occipital joint (articulation between the atlas and the occipital bone) consists of a pair of condyloid joints. The atlanto-occipital joint is a synovial joint. The ligaments connecting the bones are: Two Articular capsules; Posterior atlantoöccipital membrane; Anterior atlantoöccipital membrane; Lateral atlantoöccipital. NMDCO_relaxed.owl UBERON:0001145 biolink:NamedThing ovarian vein A vein that carries deoxygenated blood from its corresponding ovary to inferior vena cava or one of its tributaries. NMDCO_relaxed.owl UBERON:0001421 biolink:NamedThing pectoral girdle region An organism subdivision that includes the pectoral girdle skeleton and associated soft tissue. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). Examples: There are only two instances in an organism, right and left pectoral girdle regions. NMDCO_relaxed.owl UBERON:0001534 biolink:NamedThing right subclavian artery The subclavian artery that supplies the right pectoral appendage. NMDCO_relaxed.owl UBERON:0001584 biolink:NamedThing left subclavian artery The subclavian artery that supplies the left pectoral appendage. NMDCO_relaxed.owl UBERON:0002118 biolink:NamedThing right ovary An ovary that is part of a right side of organism [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0002119 biolink:NamedThing left ovary An ovary that is part of a left side of organism [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003077 biolink:NamedThing paraxial mesoderm The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube[GO]. NMDCO_relaxed.owl UBERON:0005062 biolink:NamedThing neural fold One of the two elevated edges of the neural groove[GO,MP]. NMDCO_relaxed.owl UBERON:0005460 biolink:NamedThing left vitelline vein A vitelline vein that is in the left side of a multicellular organism. NMDCO_relaxed.owl UBERON:0005472 biolink:NamedThing right vitelline vein A vitelline vein that is in the right side of a multicellular organism. NMDCO_relaxed.owl UBERON:0010707 biolink:NamedThing appendage girdle complex An organism subdivision that includes both an appendage and its associated girdle region. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). NMDCO_relaxed.owl UBERON:0015280 biolink:NamedThing pancreas left lobe A pancreatic lobule that is in_the_left_side_of a exocrine pancreas. NMDCO_relaxed.owl UBERON:0015281 biolink:NamedThing pancreas right lobe A pancreatic lobule that is in_the_right_side_of a exocrine pancreas. NMDCO_relaxed.owl UBERON:0034713 biolink:NamedThing cranial neuron projection bundle Any of the cranial nerves, or their central nervous system analogs (the optic tract, the epiphyseal tract). These analogs are not true nerves, and are instead evaginated sensory afferents emanating from the brain. NMDCO_relaxed.owl UBERON:0035553 biolink:NamedThing left cardiac chamber Any chamber of the left side of the heart. NMDCO_relaxed.owl UBERON:0035554 biolink:NamedThing right cardiac chamber Any chamber of the right side of the heart. NMDCO_relaxed.owl UBERON:8000006 biolink:NamedThing left side of back Left part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. NMDCO_relaxed.owl UBERON:8000007 biolink:NamedThing right side of back Right part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. NMDCO_relaxed.owl UBERON:0000062 biolink:NamedThing organ Anatomical structure that performs a specific function or group of functions [WP]. NMDCO_relaxed.owl UBERON:0000171 biolink:NamedThing respiration organ Organ that functions in gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms. NMDCO_relaxed.owl UBERON:0002530 biolink:NamedThing gland An organ that functions as a secretory or excretory organ. NMDCO_relaxed.owl UBERON:0002535 biolink:NamedThing gill Anatomical surface structure found in many aquatic organisms. It is a respiration organ whose function is the extraction of oxygen from water and the excretion of carbon dioxide. The microscopic structure of a gill is such that it presents a very large surface area to the external environment. Gills usually consist of thin filaments of tissue, branches, or slender tufted processes which have a highly folded surface to increase surface area. A high surface area is crucial to the gas exchange of aquatic organisms as water contains only 1/20 parts dissolved Oxygen compared to air. With the exception of some aquatic insects, the filaments and lamellae (folds) contain blood or coelomic fluid, from which gases are exchanged through the thin walls. Oxygen is carried by the blood to other parts of the body. Carbon dioxide passes from the blood through the thin gill tissue into the water. Gills or gill-like organs, located in different parts of the body, are found in various groups of aquatic animals, including mollusks, crustaceans, insects, fish, and amphibians. NMDCO_relaxed.owl UBERON:0003103 biolink:NamedThing compound organ Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types. NMDCO_relaxed.owl UBERON:0003133 biolink:NamedThing reproductive organ An organ involved in reproduction. NMDCO_relaxed.owl UBERON:0004765 biolink:NamedThing skeletal element Organ consisting of skeletal tissue. Encompasses whole bones, fused bones, cartilaginious elements, teeth, dermal denticles. NMDCO_relaxed.owl UBERON:0005057 biolink:NamedThing immune organ An organ that is part of a immune system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005172 biolink:NamedThing abdomen element An organ or element that is in the abdomen. Examples: spleen, intestine, kidney, abdominal mammary gland. NMDCO_relaxed.owl UBERON:0005174 biolink:NamedThing dorsal region element An organ or element that part of the dorsum of the organism. Examples: spinal cord, vertebrae, muscles of back. NMDCO_relaxed.owl UBERON:0005178 biolink:NamedThing thoracic cavity element An organ or element that is in the thoracic cavity. Examples: lung, heart, longus colli. NMDCO_relaxed.owl UBERON:0013765 biolink:NamedThing digestive system element Any of the organs or elements that are part of the digestive system. Examples: tongue, esophagus, spleen, crop, lunge feeding organ, tooth elements. NMDCO_relaxed.owl UBERON:0000021 biolink:NamedThing cutaneous appendage Anatomical projection that protrudes from the skin. Examples: hair, nail, feather, claw, hoof, horn, wattle, spur, beak, antler, bristle and some scales. NMDCO_relaxed.owl UBERON:0013703 biolink:NamedThing integumentary projection Anatomical projection that is part of the integumentl system. NMDCO_relaxed.owl UBERON:0000025 biolink:NamedThing tube Any hollow cylindrical anatomical structure containing a lumen through which substances are transported. NMDCO_relaxed.owl UBERON:0004111 biolink:NamedThing anatomical conduit Any tube, opening or passage that connects two distinct anatomical spaces. NMDCO_relaxed.owl UBERON:0000055 biolink:NamedThing vessel A tubular structure that contains, conveys body fluid, such as blood or lymph. NMDCO_relaxed.owl UBERON:0000161 biolink:NamedThing orifice Anatomical conduit that connects two adjacent body spaces (or a body space with the space surrounding the organism)[FMA,modified]. NMDCO_relaxed.owl UBERON:0001005 biolink:NamedThing respiratory airway An airway through which respiratory air passes in organisms. NMDCO_relaxed.owl UBERON:0001131 biolink:NamedThing vertebral foramen A foramen within a vertebral element through which the spinal cord runs. It is formed by the anterior segment, and the posterior part, the vertebral arch. NMDCO_relaxed.owl UBERON:0005744 biolink:NamedThing bone foramen Anatomical space that is an opening in a bone, usually for passage of blood vessels or nerves. NMDCO_relaxed.owl UBERON:0006692 biolink:NamedThing vertebral canal A conduit enclosed within the vertebral foramen of the vertebrae through which the spinal cord passes. NMDCO_relaxed.owl UBERON:0000026 biolink:NamedThing appendage Major subdivision of an organism that protrudes from the body[DOS, CARO]. NMDCO_relaxed.owl UBERON:0000475 biolink:NamedThing organism subdivision Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument. NMDCO_relaxed.owl UBERON:0000153 biolink:NamedThing anterior region of body NMDCO_relaxed.owl UBERON:0000154 biolink:NamedThing posterior region of body NMDCO_relaxed.owl UBERON:0000974 biolink:NamedThing neck An organism subdivision that extends from the head to the pectoral girdle, encompassing the cervical vertebral column. NMDCO_relaxed.owl UBERON:0001137 biolink:NamedThing dorsum A major subdivision of an organism that is the entire part of the organism dorsal to a horizontal plane and bounded on one side by the same transverse plane. In vertebrares this includes the vertebral column.. NMDCO_relaxed.owl UBERON:0001353 biolink:NamedThing anal region The anus and surrounding regions. Encompasses both internal and external regions, where present. NMDCO_relaxed.owl UBERON:0001444 biolink:NamedThing subdivision of head NMDCO_relaxed.owl UBERON:0007811 biolink:NamedThing craniocervical region The anteriormost subdivision of the body that includes the head, jaws, pharyngeal region and the neck (if present). In vertebrates this is the subdivision that includes the cervical vertebrae. NMDCO_relaxed.owl UBERON:0007823 biolink:NamedThing appendage girdle region An organism subdivision that encompasses the region containing the pectoral or pelvic girdle. Note that this includes both the skeletal elements and associated tissues (integument, muscle, etc). NMDCO_relaxed.owl UBERON:0008231 biolink:NamedThing dorsal thoracic segment of trunk Subdivision of thorax, which in humans is the posterior part of the thorax and is demarcated from the chest by the external surface of the posterolateral part of the rib cage and the anterior surface of the thoracic vertebral column; together with the chest, it constitutes the thorax. NMDCO_relaxed.owl UBERON:0009569 biolink:NamedThing subdivision of trunk NMDCO_relaxed.owl UBERON:0011676 biolink:NamedThing subdivision of organism along main body axis A major subdivision of an organism that divides an organism along its main body axis (typically anterio-posterior axis). In vertebrates, this is based on the vertebral column. NMDCO_relaxed.owl UBERON:0013701 biolink:NamedThing main body axis A principle subdivision of an organism that includes all structures along the primary axis, typically the anterior-posterior axis, from head to tail, including structures of the body proper where present (for example, ribs), but excluding appendages. NMDCO_relaxed.owl UBERON:0013702 biolink:NamedThing body proper The region of the organism associated with the visceral organs. NMDCO_relaxed.owl UBERON:0000031 biolink:NamedThing lamina propria of trachea A lamina propria that is part of a respiratory airway. NMDCO_relaxed.owl UBERON:0001974 biolink:NamedThing lamina propria of esophagus A lamina propria that is part of a esophagus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004779 biolink:NamedThing respiratory system lamina propria A lamina propria that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004780 biolink:NamedThing gastrointestinal system lamina propria A lamina propria that is part of a gastrointestinal system. NMDCO_relaxed.owl UBERON:0005334 biolink:NamedThing oral lamina propria A lamina propria that is part of a mucosa of oral region. NMDCO_relaxed.owl UBERON:0015834 biolink:NamedThing duodenum lamina propria A lamina propria that is part of a duodenum. NMDCO_relaxed.owl UBERON:0000033 biolink:NamedThing head The head is the anterior-most division of the body [GO]. NMDCO_relaxed.owl UBERON:0000915 biolink:NamedThing thoracic segment of trunk Subdivision of trunk that lies between the head and the abdomen. NMDCO_relaxed.owl UBERON:0002100 biolink:NamedThing trunk Organism subdivision which is the part of the body posterior to the cervical region (or head, when cervical region not present) and anterior to the caudal region. Includes the sacrum when present. NMDCO_relaxed.owl UBERON:0002415 biolink:NamedThing tail An external caudal extension of the body. In chordates, the tail is post-anal, in other animals the anus ends in the tail. NMDCO_relaxed.owl UBERON:0002417 biolink:NamedThing abdominal segment of trunk The abdominal segment of the torso. NMDCO_relaxed.owl UBERON:0005434 biolink:NamedThing cervical region NMDCO_relaxed.owl UBERON:0006071 biolink:NamedThing caudal region Subdivision of an organism along anterior-posterior axis that is the posteriormost region, extending past the anus (or cloaca, if present), consisting of a tail in some fully formed chordates (or a tail bud in embryos). In animals that have a sacral region, this is the region immediately posterior to this. NMDCO_relaxed.owl UBERON:0010162 biolink:NamedThing post-anal tail tip The distal end of the tail. NMDCO_relaxed.owl UBERON:0000481 biolink:NamedThing multi-tissue structure Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types. NMDCO_relaxed.owl UBERON:0000073 biolink:NamedThing regional part of nervous system Any part or collection of parts of the central or peripheral nervous system. Parts may span both CNS and PNS. NMDCO_relaxed.owl UBERON:0007375 biolink:NamedThing roof of mouth A multi-tissue structure consisting of bone and soft tissue that forms a part of the roof of the oral cavity. In mammals this is the combination of the primary palate (premaxilla) and the secondary palate. In early tetrapods it consists of the vomer, pterygoid, parasphenoid, palatine and ectopterygoid bones. NMDCO_relaxed.owl UBERON:0009191 biolink:NamedThing sphenoid bone pre-cartilage condensation A sphenoid endochondral element that is composed primarily of a pre-cartilage condensation. NMDCO_relaxed.owl UBERON:0011997 biolink:NamedThing coelom The aggregate of the coelemic cavity lumen plus the membranes that line the lumen. NMDCO_relaxed.owl UBERON:0012361 biolink:NamedThing internal anal region NMDCO_relaxed.owl UBERON:0012469 biolink:NamedThing external anal region NMDCO_relaxed.owl UBERON:0016887 biolink:NamedThing entire extraembryonic component The part of the conceptus that may be lost before birth or will be discarded at birth, or when the embryo becomes an independent organism. NMDCO_relaxed.owl UBERON:0000043 biolink:NamedThing tendon Dense regular connective tissue that connects muscle to bone[VSAO]. NMDCO_relaxed.owl UBERON:0000063 biolink:NamedThing organ subunit A part of an organ that constitutes a distinct modular sub-unit. In some cases, the organ may also contain other sub-units of identical or similar types, in other cases this may be a distinct entity. NMDCO_relaxed.owl UBERON:0004732 biolink:NamedThing segmental subdivision of nervous system Any segmental subdivision of a nervous system. Includes metameric developmental segments, such as vertebrates neuromeres. NMDCO_relaxed.owl UBERON:0009911 biolink:NamedThing lobule NMDCO_relaxed.owl UBERON:0009912 biolink:NamedThing anatomical lobe A portion of an organ, such as the liver, lung, breast, or brain. NMDCO_relaxed.owl UBERON:0004921 biolink:NamedThing subdivision of digestive tract A proximal-distal subdivision of the digestive tract. NMDCO_relaxed.owl UBERON:0000168 biolink:NamedThing proximal-distal subdivision of colon A section dividing a colon along a proximal-distal axis. NMDCO_relaxed.owl UBERON:0001041 biolink:NamedThing foregut Anterior subdivision of a digestive tract. NMDCO_relaxed.owl UBERON:0001045 biolink:NamedThing midgut Middle subdivision of a digestive tract[CJM]. In vertebrates: The middle part of the alimentary canal from the stomach, or entrance of the bile duct, to, or including, the large intestine[GO]. NMDCO_relaxed.owl UBERON:0001046 biolink:NamedThing hindgut The caudalmost subdivision of a digestive tract. NMDCO_relaxed.owl UBERON:0004907 biolink:NamedThing lower digestive tract The region of the digestive tract extending from the beginning of the intestines to the anus[GO - gut definition]. NMDCO_relaxed.owl UBERON:0004908 biolink:NamedThing upper digestive tract The region of the digestive tract extending from the mouth cavity through pharynx esophagus stomach and duodenum. NMDCO_relaxed.owl UBERON:0006562 biolink:NamedThing pharynx The pharynx is the part of the digestive system immediately posterior to the mouth[GO]. NMDCO_relaxed.owl UBERON:0006866 biolink:NamedThing terminal part of digestive tract The distalmost portion of the digestive tract, derived from the hindgut, and terminating with the anus. NMDCO_relaxed.owl UBERON:0009854 biolink:NamedThing digestive tract diverticulum Branch or outpocketing of the digestive tract. NMDCO_relaxed.owl UBERON:0003408 biolink:NamedThing gland of digestive tract A gland that is part of a digestive tract [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003832 biolink:NamedThing esophagus muscle Any muscle organ that is part of a esophagus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0006925 biolink:NamedThing digestive system gland Any gland that is part of the digestive system. NMDCO_relaxed.owl UBERON:0010039 biolink:NamedThing food storage organ An organ of the digestive tract that is capable of retaining and storing food. NMDCO_relaxed.owl UBERON:0011185 biolink:NamedThing gastrointestinal sphincter A sphincter muscle that is part of the gastrointestinal system. NMDCO_relaxed.owl UBERON:0012360 biolink:NamedThing bone of jaw A bone element that is part of a jaw region. NMDCO_relaxed.owl UBERON:0014783 biolink:NamedThing cloacal muscle Any muscle organ that is part of a cloaca. NMDCO_relaxed.owl UBERON:0000060 biolink:NamedThing anatomical wall Organ component adjacent to an organ cavity and which consists of a maximal aggregate of organ component layers. NMDCO_relaxed.owl UBERON:0000064 biolink:NamedThing organ part A multicellular structure that is a part of an organ. NMDCO_relaxed.owl UBERON:0000353 biolink:NamedThing parenchyma Functional part of an organ in the body. This is in contrast to the stroma, which refers to the structural tissue of organs, being exactly, connective tissues. NMDCO_relaxed.owl UBERON:0000440 biolink:NamedThing trabecula A small, often microscopic, tissue element in the form of a small beam, strut or rod, generally having a mechanical function, and usually but not necessarily composed of dense collagenous tissue. On histological section, a trabecula can look like a septum, but in three dimensions they are topologically distinct, with trabeculae being roughly rod or pillar-shaped and septa being sheet-like. Trabeculae are usually composed of dense fibrous tissue, i.e. mainly of collagen, and in most cases provide mechanical strengthening or stiffening to a soft solid organ, such as the spleen. They can be composed of other materials, such as bone or muscle[WP]. NMDCO_relaxed.owl UBERON:0003891 biolink:NamedThing stroma Connective, non-functional supportive framework of a biological cell, tissue, or organ. Contrast with parenchyma. NMDCO_relaxed.owl UBERON:0006003 biolink:NamedThing integumentary adnexa Anatomical structure embedded in or located in the integument that is part of the integumental system. Examples: hair, follicles, skin glands, claws, nails, feathers. NMDCO_relaxed.owl UBERON:0013522 biolink:NamedThing subdivision of tube NMDCO_relaxed.owl UBERON:0000463 biolink:NamedThing organism substance Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body. NMDCO_relaxed.owl UBERON:0005423 biolink:NamedThing developing anatomical structure NMDCO_relaxed.owl UBERON:0034923 biolink:NamedThing disconnected anatomical group Material anatomical entity consisting of multiple anatomical structures that are not connected to each other. NMDCO_relaxed.owl UBERON:0034925 biolink:NamedThing anatomical collection A collection of anatomical structures that are alike in terms of their morphology or developmental origin. NMDCO_relaxed.owl UBERON:0036215 biolink:NamedThing anatomical surface region Material anatomical entity that forms the outermost boundary of an anatomical structure. NMDCO_relaxed.owl UBERON:0000468 biolink:NamedThing multicellular organism Anatomical structure that is an individual member of a species and consists of more than one cell. NMDCO_relaxed.owl UBERON:0000479 biolink:NamedThing tissue Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation. NMDCO_relaxed.owl UBERON:0005156 biolink:NamedThing reproductive structure Any anatomical structure that is part of the reproductive system. NMDCO_relaxed.owl UBERON:0034921 biolink:NamedThing multi organ part structure An multicellular anatomical structure that has subparts of multiple organs as a part. NMDCO_relaxed.owl UBERON:0000066 biolink:NamedThing fully formed stage The stage of development at which the animal is fully formed, including immaturity and maturity. Includes both sexually immature stage, and adult stage. NMDCO_relaxed.owl UBERON:0000105 biolink:NamedThing life cycle stage A spatiotemporal region encompassing some part of the life cycle of an organism. NMDCO_relaxed.owl UBERON:0000069 biolink:NamedThing larval stage A distinct juvenile stage many animals undergo before metamorphosis into adults. Animals with indirect development such as insects, amphibians, or cnidarians typically have a larval phase of their life cycle. NMDCO_relaxed.owl UBERON:0000071 biolink:NamedThing death stage End of the life of an organism. NMDCO_relaxed.owl UBERON:0000092 biolink:NamedThing post-embryonic stage Stage succeeding embryo, including mature structure. NMDCO_relaxed.owl UBERON:0000106 biolink:NamedThing zygote stage A stage at which the organism is a single cell produced by means of sexual reproduction. NMDCO_relaxed.owl UBERON:0000107 biolink:NamedThing cleavage stage The first few specialized divisions of an activated animal egg; Stage consisting of division of cells in the early embryo. The zygotes of many species undergo rapid cell cycles with no significant growth, producing a cluster of cells the same size as the original zygote. The different cells derived from cleavage are called blastomeres and form a compact mass called the morula. Cleavage ends with the formation of the blastula. NMDCO_relaxed.owl UBERON:0000108 biolink:NamedThing blastula stage An early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence. NMDCO_relaxed.owl UBERON:0000109 biolink:NamedThing gastrula stage A stage defined by complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm. NMDCO_relaxed.owl UBERON:0000110 biolink:NamedThing neurula stage Staged defined by the formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system. NMDCO_relaxed.owl UBERON:0000111 biolink:NamedThing organogenesis stage A stage at which the ectoderm, endoderm, and mesoderm develop into the internal organs of the organism. NMDCO_relaxed.owl UBERON:0000162 biolink:NamedThing cloaca Common chamber into which the intestines and excretory system opens. Arises during development in all vertebrates, but in many it becomes subdivided, lost or incorporated into other structures. NMDCO_relaxed.owl UBERON:0000930 biolink:NamedThing stomodeum Anterior part of the embryonic digestive tract that develops into a mouth. The stomodeum includes as parts an invagination of the ectoderm and the stomodeal cavity. NMDCO_relaxed.owl UBERON:0006834 biolink:NamedThing uterus or analog A subdivision of a the reproductive tract in a female organism that is the site of embryo development. NMDCO_relaxed.owl UBERON:0035804 biolink:NamedThing future mouth The primordial mouth region of the developing head. NMDCO_relaxed.owl UBERON:0000076 biolink:NamedThing external ectoderm The surface (external) layer of ectoderm which begins to proliferate shortly after separation from the neuroectoderm. NMDCO_relaxed.owl UBERON:0000490 biolink:NamedThing unilaminar epithelium Epithelium which consists of a single layer of epithelial cells. Examples: endothelium, mesothelium, glandular squamous epithelium.[FMA]. NMDCO_relaxed.owl UBERON:0000484 biolink:NamedThing simple cuboidal epithelium Unilaminar epithelium that consists of a single layer of cuboidal cells. NMDCO_relaxed.owl UBERON:0000485 biolink:NamedThing simple columnar epithelium Unilaminar epithelium, which consists of a single layer of columnar cells. Examples: ciliated columnar epithelium, gastric epithelium, microvillus columnar epithelium.[FMA]. NMDCO_relaxed.owl UBERON:0000487 biolink:NamedThing simple squamous epithelium Unilaminar epithelium which consists of a single layer of squamous cells. Examples: pulmonary alveolar epithelium, endothelium.[FMA]. NMDCO_relaxed.owl UBERON:0001081 biolink:NamedThing endocardium of ventricle Endocardium that is part of the cardiac ventricle. NMDCO_relaxed.owl UBERON:0003071 biolink:NamedThing eye primordium Portion of tissue that is part of the anterior neural keel and will form the optic vesicle[ZFA]. A paired ectodermal placode that becomes invaginated to form the embryonic lens vesicles. NMDCO_relaxed.owl UBERON:0003258 biolink:NamedThing endoderm of foregut An endoderm that is part of a foregut [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003259 biolink:NamedThing endoderm of midgut An endoderm that is part of a midgut [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003260 biolink:NamedThing endoderm of hindgut An endoderm that is part of a hindgut [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003372 biolink:NamedThing pectoral appendage bud ectoderm An unilaminar epithelium that surrounds a pectoral appendage bud. NMDCO_relaxed.owl UBERON:0004345 biolink:NamedThing trophectoderm Outermost layer of cells in the blastodermic vesicle, which will develop into the trophoblast layer and then contact the endometrium and take part in establishing the embryo's means of nutrition. NMDCO_relaxed.owl UBERON:0005233 biolink:NamedThing medial-nasal process ectoderm An ectoderm that is part of a medial nasal prominence [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0006267 biolink:NamedThing notochordal plate The notochordal plate is the dorsal part of the notochordal process when the ventral portion breaks down. It is continuous laterally with the endoderm that composes the roof of the primitive foregut and is in contact dorsally with the neural tube. The folding off of the notochordal plate gives rise to the notochord. NMDCO_relaxed.owl UBERON:0007383 biolink:NamedThing enveloping layer of ectoderm Outermost layer of cells surrounding the embryo. NMDCO_relaxed.owl UBERON:0007690 biolink:NamedThing early pharyngeal endoderm NMDCO_relaxed.owl UBERON:0009129 biolink:NamedThing right atrium endocardium Endocardium that is part of the right atrium. NMDCO_relaxed.owl UBERON:0009497 biolink:NamedThing epithelium of foregut-midgut junction An epithelium that is part of a foregut-midgut junction. NMDCO_relaxed.owl UBERON:0009521 biolink:NamedThing anal membrane endodermal component An endoderm that is part of a anal region. NMDCO_relaxed.owl UBERON:0009846 biolink:NamedThing embryonic cloacal epithelium An epithelium that is part of a embryonic cloaca. NMDCO_relaxed.owl UBERON:0011272 biolink:NamedThing embryonic skin basal layer NMDCO_relaxed.owl UBERON:0011592 biolink:NamedThing future upper lip NMDCO_relaxed.owl UBERON:0011596 biolink:NamedThing future lower lip NMDCO_relaxed.owl UBERON:0011642 biolink:NamedThing oral epithelium from ectoderm An epithelium that develops_from a ectoderm and is part of a oral epithelium. NMDCO_relaxed.owl UBERON:0014702 biolink:NamedThing frontonasal process epithelium An epithelium that is part of a frontonasal prominence. NMDCO_relaxed.owl UBERON:0014703 biolink:NamedThing anal membrane ectodermal component A unilaminar epithelium that develops_from a ectoderm and is part of a anal region. NMDCO_relaxed.owl UBERON:0016545 biolink:NamedThing pharyngeal ectoderm The external part of the developing pharynx that is made of ectoderm. During vertebrate development, pockets form in pharyngeal ectoderm between the pharyngeal arches. NMDCO_relaxed.owl UBERON:0005291 biolink:NamedThing embryonic tissue A portion of tissue that is part of an embryo. NMDCO_relaxed.owl UBERON:0001049 biolink:NamedThing neural tube In the developing vertebrate, the neural tube is the embryo's precursor to the central nervous system, which comprises the brain and spinal cord. The neural groove gradually deepens as the neural folds become elevated, and ultimately the folds meet and coalesce in the middle line and convert the groove into a closed tube, the neural tube or neural canal (which strictly speaking is the center of the neural tube), the ectodermal wall of which forms the rudiment of the nervous system. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0003075 biolink:NamedThing neural plate A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]. NMDCO_relaxed.owl UBERON:0003304 biolink:NamedThing mesoderm blood island A blood island that is part of a mesoderm. NMDCO_relaxed.owl UBERON:0003894 biolink:NamedThing liver primordium A small endodermal thickening in the foregut adjacent to the transverse septum. Invaginates forming the hepatic diverticulum. NMDCO_relaxed.owl UBERON:0003922 biolink:NamedThing pancreatic epithelial bud The embryonic pancreas develops from two separate anlagen in the foregut epithelium, one dorsal and two ventral pancreatic buds[PMID]. NMDCO_relaxed.owl UBERON:0004022 biolink:NamedThing germinal neuroepithelium The single layer of epithelial cells that lines the early neural tube and develops into the nervous system and into the neural crest cells. NMDCO_relaxed.owl UBERON:0004060 biolink:NamedThing neural tube ventricular layer The layer of undifferentiated, proliferating cells that line the neural tube lumen that is the immediate transformation of the germinal neuroepithelium. NMDCO_relaxed.owl UBERON:0004061 biolink:NamedThing neural tube mantle layer The layer of glia and differentiating neurons that forms as a second layer around the germinal neuroepithium; as this develops it comes to lie between the ventricular and marginal layers and includes the basal and alar plates. Develops into neurons and glia forming a gray matter layer. NMDCO_relaxed.owl UBERON:0004141 biolink:NamedThing heart tube An epithelial tube that will give rise to the mature heart. NMDCO_relaxed.owl UBERON:0005253 biolink:NamedThing head mesenchyme Portion of primordial embryonic connective tissue of the developing head, consisting of mesenchymal cells supported in interlaminar jelly, that derive mostly from the mesoderm and contribute to head connective tissue, bone and musculature in conjunction with cranial neural crest cells. NMDCO_relaxed.owl UBERON:0005256 biolink:NamedThing trunk mesenchyme Mesenchyme that is part of a developing trunk. NMDCO_relaxed.owl UBERON:0005594 biolink:NamedThing head somite Somite located in the head region, caudal to the otic vesicle. NMDCO_relaxed.owl UBERON:0005702 biolink:NamedThing optic eminence mesenchyme Mesenchyme that is part of a optic eminence. NMDCO_relaxed.owl UBERON:0005866 biolink:NamedThing pre-cartilage condensation A delimited region of dense mesenchyme within looser mesenchyme whose cells are committed to become chondroblasts. NMDCO_relaxed.owl UBERON:0006239 biolink:NamedThing future central tendon A tendon that has the potential to develop into a central tendon. NMDCO_relaxed.owl UBERON:0006279 biolink:NamedThing pleuroperitoneal canal Each of the canals that links the peritoneal cavity and the caudal part of a pleural cavity. NMDCO_relaxed.owl UBERON:0008835 biolink:NamedThing hepatic diverticulum An out-pocket of thickened ventral foregut epithelium adjacent to the developing heart. Constitutes the first morphological sign of the embryonic liver. The anterior portion of the hepatic diverticulum gives rise to the liver and intrahepatic biliary tree, while the posterior portion forms the gall bladder and extrahepatic bile ducts. NMDCO_relaxed.owl UBERON:0009133 biolink:NamedThing pleuroperitoneal membrane A fold of tissue which extends into the peritoneal cavity of the developing embryo and participates in the separation of the pleural and peritoneal cavities. NMDCO_relaxed.owl UBERON:0009526 biolink:NamedThing maxillary process mesenchyme Mesenchyme that is part of a maxillary prominence. NMDCO_relaxed.owl UBERON:0009722 biolink:NamedThing entire pharyngeal arch endoderm NMDCO_relaxed.owl UBERON:0010316 biolink:NamedThing germ layer / neural crest NMDCO_relaxed.owl UBERON:0010359 biolink:NamedThing pharyngeal arch mesenchyme from neural crest Mesenchyme that develops_from a neural crest and is part of a entire pharyngeal arch associated mesenchyme. NMDCO_relaxed.owl UBERON:0000085 biolink:NamedThing morula A spherical embryonic mass of blastomeres formed before the blastula and resulting from cleavage of the fertilized ovum. NMDCO_relaxed.owl UBERON:0000307 biolink:NamedThing blastula Organism at the blastula stage - an early stage of embryonic development in animals. It is produced by cleavage of a fertilized ovum and consists of a spherical layer of around 128 cells surrounding a central fluid-filled cavity called the blastocoel. The blastula follows the morula and precedes the gastrula in the developmental sequence. NMDCO_relaxed.owl UBERON:0000323 biolink:NamedThing late embryo An embryo that is at the late embryonic stage; this stage covers late steps of the embryogenesis with a fully formed embryo still developing before birth or egg hatching. NMDCO_relaxed.owl UBERON:0004455 biolink:NamedThing neurula embryo An embryo at the neurula stage. NMDCO_relaxed.owl UBERON:0004734 biolink:NamedThing gastrula Organism at the gastrula stage. NMDCO_relaxed.owl UBERON:0007010 biolink:NamedThing cleaving embryo Organism at the cleavage stage. NMDCO_relaxed.owl UBERON:0000086 biolink:NamedThing zona pellucida A glycoprotein membrane surrounding the plasma membrane of an oocyte. It is a vital constitutive part of the latter, external but not extraneous to it. The zona pellucida first appears in multilaminar primary oocytes. NMDCO_relaxed.owl UBERON:0005764 biolink:NamedThing acellular membrane An acellular anatomical structure that is the bounding layer of a anatomical structure. NMDCO_relaxed.owl UBERON:0002050 biolink:NamedThing embryonic structure Anatomical structure that is part of an embryo. NMDCO_relaxed.owl UBERON:0000088 biolink:NamedThing trophoblast The mesectodermal cell layer arising from the trophectoderm that erodes the uterine mucosa and contributes to the formation of the placenta. NMDCO_relaxed.owl UBERON:0000091 biolink:NamedThing bilaminar disc A flattened, almost circular bilaminar plate of cells formed when the inner cell mass (aka embryoblast) forms two epithelial layers, each of a distinct lineage, separated by an extracellular basement membrane: the external (dorsal) layer is called the epiblast and the internal (ventral) layer is called the hypoblast (aka primitive endoderm); together, they compose the bilaminar embryonic disc. NMDCO_relaxed.owl UBERON:0000164 biolink:NamedThing primitive urogenital sinus The ventral part of the cloaca remaining after septation of the rectum, which further develops into part of the bladder, part of the prostatic part of the male urethra and the urethra and vestibule in females. NMDCO_relaxed.owl UBERON:0002061 biolink:NamedThing truncus arteriosus The truncus arteriosus and bulbus cordis are divided by the aorticopulmonary septum. The truncus arteriosus gives rise to the ascending aorta and the pulmonary trunk. The bulbus cordis gives rise to the smooth parts (outflow tract) of the left and right ventricles. NMDCO_relaxed.owl UBERON:0002296 biolink:NamedThing dorsal mesentery The mesentery that originates from the dorsal side of the peritoneal cavity[ZFA]. NMDCO_relaxed.owl UBERON:0002532 biolink:NamedThing epiblast (generic) In amniote animal embryology, the epiblast is a tissue type derived either from the inner cell mass in mammals or the blastodisc in birds and reptiles. It lies above the hypoblast. In mammalian embryogenesis, the columnar cells of the epiblast are adjacent to the trophoblast, while the cuboidal cells of the hypoblast are closer to the blastocoele. The epiblast, whilst referred to as the primary ectoderm, differentiates to form all three layers of the trilaminar germ disc in a process called gastrulation[WP]. The outer of the two layers of the blastoderm that form during gastrulation, corresponding to primitive ectoderm during gastrulation and to the definitive ectoderm after gastrulation[ZFA]. NMDCO_relaxed.owl UBERON:0002533 biolink:NamedThing post-anal tail bud The rapidly proliferating mass of cells at the caudal extremity of the embryo; remnant of the primitive node. NMDCO_relaxed.owl UBERON:0003057 biolink:NamedThing chordal neural plate The portion of neural plate posterior to the mid-hindbrain junction. NMDCO_relaxed.owl UBERON:0003063 biolink:NamedThing prechordal plate A horseshoe-shaped thickening of the endoderm at the cranial (rostral) end of the primitive streak formed by the involution of Spemann's organizer cells which, together with the notochord, induces the formation of the neural plate from the overlying ectodermal cells and contributes mesodermal type cells to the surrounding tissue. NMDCO_relaxed.owl UBERON:0003064 biolink:NamedThing intermediate mesoderm The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads. NMDCO_relaxed.owl UBERON:0003068 biolink:NamedThing axial mesoderm The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord. NMDCO_relaxed.owl UBERON:0003076 biolink:NamedThing posterior neural tube NMDCO_relaxed.owl UBERON:0003080 biolink:NamedThing anterior neural tube NMDCO_relaxed.owl UBERON:0003887 biolink:NamedThing intraembryonic coelom The part of the coelom in the embryo between the somatopleuric and splanchnopleuric mesoderm; the principal body cavities of the trunk (thoracic, abdominal, and pelvic) arise from this embryonic part of the coelom. NMDCO_relaxed.owl UBERON:0004139 biolink:NamedThing cardiogenic plate The first recognizable structure derived from the heart field. NMDCO_relaxed.owl UBERON:0004356 biolink:NamedThing apical ectodermal ridge Multilayered ectodermal region at the distal tip of a limb or fin bud necessary for the proper development of the underlying mesenchyme[MP,modified]. Along with the zone of polarizing activity, it is a crucial organizing region during limb development[WP]. NMDCO_relaxed.owl UBERON:0004364 biolink:NamedThing ectoplacental cone Thickened trophoblast of the blastocyst in rodents that becomes the fetal portion of the placenta. NMDCO_relaxed.owl UBERON:0004706 biolink:NamedThing bulbus cordis A transient fetal dilation of the distal (or cranial) heart tube located where the arterial trunk joins the ventral roots of the aortic arches. NMDCO_relaxed.owl UBERON:0004872 biolink:NamedThing splanchnic layer of lateral plate mesoderm Layer of lateral plate mesoderm that forms the circulatory system and future gut wall - overlies endoderm[WP]. NMDCO_relaxed.owl UBERON:0004873 biolink:NamedThing splanchnopleure A structure created during embryogenesis when the lateral mesoderm splits into two layers - the inner (or splanchnic) layer adheres to the endoderm, and with it forms the splanchnopleure[WP]. NMDCO_relaxed.owl UBERON:0004874 biolink:NamedThing somatopleure A structure created during embryogenesis when the lateral mesoderm splits into two layers - the outer (or somatic) layer becomes applied to the inner surface of the ectoderm, and with it forms the somatopleure.[WP]. NMDCO_relaxed.owl UBERON:0004880 biolink:NamedThing chordamesoderm The central region of trunk mesoderm. This tissue forms the notochord. NMDCO_relaxed.owl UBERON:0005061 biolink:NamedThing neural groove The median dorsal longitudinal groove formed in the embryo by the neural plate after the appearance of the neural folds. NMDCO_relaxed.owl UBERON:0005085 biolink:NamedThing ectodermal placode An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm[GO]. NMDCO_relaxed.owl UBERON:0005092 biolink:NamedThing right horn of sinus venosus NMDCO_relaxed.owl UBERON:0005432 biolink:NamedThing aortic sac The dilated structure that is lined by endothelial cells and located at the arterial pole of the heart just above (distal to) the truncus arteriosus in mammalian embryos; it is the primordial vascular channel from which the aortic arches (and eventually the dorsal aortae) arise; the aortic sac is homologous to the ventral aorta of gill-bearing vertebrates. NMDCO_relaxed.owl UBERON:0005868 biolink:NamedThing maxillary prominence The paired dorsal prominences formed by bifurcation of the first pharyngeal arches in the embryo that unite with the ipsilateral medial nasal process to form the upper jaw. NMDCO_relaxed.owl UBERON:0006218 biolink:NamedThing common atrial chamber NMDCO_relaxed.owl UBERON:0006598 biolink:NamedThing presumptive structure Portion of embryonic tissue determined by fate mapping to become a structure. NMDCO_relaxed.owl UBERON:0007144 biolink:NamedThing embryonic post-anal tail An embryonic structure that will either develop into a post-anal tail or recede into a vestigial remnant of the tail. NMDCO_relaxed.owl UBERON:0007237 biolink:NamedThing 1st arch mandibular component NMDCO_relaxed.owl UBERON:0007238 biolink:NamedThing 1st arch maxillary component NMDCO_relaxed.owl UBERON:0012314 biolink:NamedThing embryonic facial prominence One of five swellings formed during the development of the face. NMDCO_relaxed.owl UBERON:0034878 biolink:NamedThing prechordal mesoderm The area of axial mesoderm that develops into the prechordal plate. NMDCO_relaxed.owl UBERON:0002200 biolink:NamedThing vasculature of head Vasculature that is part of a head [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0002201 biolink:NamedThing vasculature of trunk A vasculature that is part of a trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0002203 biolink:NamedThing vasculature of eye Vasculature that is part of the eye region. NMDCO_relaxed.owl UBERON:0004118 biolink:NamedThing vasculature of iris A vasculature that is part of a iris [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004374 biolink:NamedThing vitelline vasculature Vascular network that is connected to the yolk sac. NMDCO_relaxed.owl UBERON:0004521 biolink:NamedThing vasculature of muscle organ A vasculature that is part of a muscle organ [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004522 biolink:NamedThing vasculature of musculoskeletal system A vasculature that is part of a musculoskeletal system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004536 biolink:NamedThing lymph vasculature A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep. NMDCO_relaxed.owl UBERON:0004581 biolink:NamedThing systemic venous system The part of the venous system that drains the general body tissues[Kardong]. NMDCO_relaxed.owl UBERON:0004864 biolink:NamedThing vasculature of retina A vasculature that is part of a retina [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005629 biolink:NamedThing vascular plexus A vascular network formed by frequent anastomoses between the blood vessels (arteries or veins) of a part. NMDCO_relaxed.owl UBERON:0005806 biolink:NamedThing portal system In the circulatory system of animals, a portal venous system occurs when a capillary bed drains into another capillary bed through veins, without first going through the heart. Both capillary beds and the blood vessels that connect them are considered part of the portal venous system. They are relatively uncommon as the majority of capillary beds drain into veins which then drain into the heart, not into another capillary bed. Portal venous systems are considered venous because the blood vessels that join the two capillary beds are either veins or venules. Examples of such systems include the hepatic portal system and the hypophyseal portal system. Unqualified, 'portal venous system' often refers to the hepatic portal system. For this reason, 'portal vein' most commonly refers to the hepatic portal vein[WP]. NMDCO_relaxed.owl UBERON:0006876 biolink:NamedThing vasculature of organ A vasculature that is part of a organ. NMDCO_relaxed.owl UBERON:0006877 biolink:NamedThing vasculature of liver A vasculature that is part of a liver. NMDCO_relaxed.owl UBERON:0007204 biolink:NamedThing brachiocephalic vasculature The vasculature consisting of brachiocephalic arteries and veins. NMDCO_relaxed.owl UBERON:0007302 biolink:NamedThing pectoral appendage vasculature A vasculature that is part of a pectoral appendage. NMDCO_relaxed.owl UBERON:0007303 biolink:NamedThing pharyngeal vasculature A vasculature that is part of a chordate pharynx. NMDCO_relaxed.owl UBERON:0007304 biolink:NamedThing appendage vasculature A vasculature that is part of a limb/fin. NMDCO_relaxed.owl UBERON:0010204 biolink:NamedThing tail vasculature A vasculature that is part of a post-anal tail. NMDCO_relaxed.owl UBERON:0013127 biolink:NamedThing pulmonary venous system The part of the venous system that drains the lungs[Kardong]. NMDCO_relaxed.owl UBERON:0018674 biolink:NamedThing heart vasculature An interconnected tubular multi-tissue structure that contains fluid that is actively transported around the heart. NMDCO_relaxed.owl UBERON:0035549 biolink:NamedThing vasculature of integument The part of the circulatory system that lies within the subcutaneous tissue layers close to the surface of the skin. NMDCO_relaxed.owl UBERON:0035551 biolink:NamedThing deep vasculature The part of the circulatory system that lies deep beneath the subcutaneous tissue layers away from the surface of the skin. NMDCO_relaxed.owl UBERON:0036301 biolink:NamedThing vasculature of spleen NMDCO_relaxed.owl UBERON:0036302 biolink:NamedThing vasculature of central nervous system plus retina NMDCO_relaxed.owl UBERON:0036303 biolink:NamedThing vasculature of central nervous system NMDCO_relaxed.owl UBERON:2001073 biolink:NamedThing axial vasculature NMDCO_relaxed.owl UBERON:0001886 biolink:NamedThing choroid plexus A network formed by blood vessels and the tela choroidea which secretes CSF into the ventricular spaces. NMDCO_relaxed.owl UBERON:0000104 biolink:NamedThing life cycle An entire span of an organism's life. In metazoans, commences with the zygote stage and ends with the death of the organism. NMDCO_relaxed.owl UBERON:0003566 biolink:NamedThing head connective tissue A portion of connective tissue that is part of a head [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003567 biolink:NamedThing abdomen connective tissue A portion of connective tissue that is part of an abdomen [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003568 biolink:NamedThing neck connective tissue A portion of connective tissue that is part of a neck [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003570 biolink:NamedThing respiratory system connective tissue A portion of connective tissue that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003586 biolink:NamedThing trunk connective tissue A portion of connective tissue that is part of a trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003593 biolink:NamedThing thoracic cavity connective tissue A portion of connective tissue that is part of a thoracic cavity [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003599 biolink:NamedThing tail connective tissue A portion of connective tissue that is part of a tail [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003837 biolink:NamedThing thoracic segment connective tissue A portion of connective tissue that is part of a thorax [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003838 biolink:NamedThing abdominal segment connective tissue A portion of connective tissue that is part of an abdominal segment of trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004267 biolink:NamedThing back connective tissue A portion of connective tissue that is part of a back [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004755 biolink:NamedThing skeletal tissue A specialized form of connective tissue in which the extracellular matrix is firm, providing the tissue with resilience, and/or mineralized and that functions in mechanical and structural support.[VSAO]. NMDCO_relaxed.owl UBERON:0004857 biolink:NamedThing skeletal muscle connective tissue A connective tissue that surrounds a skeletal muscle tissue. NMDCO_relaxed.owl UBERON:0011821 biolink:NamedThing irregular connective tissue Connective tissue, which consists of a population of connective tissue cells, the intercellular matrix of which contains an irregular network of collagen and elastic fiber bundles. Examples: areolar tissue, mucoid tissue, connective tissue of peritoneum, connective tissue of fibrous pericardium. NMDCO_relaxed.owl UBERON:0006670 biolink:NamedThing central tendon of diaphragm The three-lobed cloverleaf-shaped aponeurosis situated at the center of the diaphragm; the central tendon is fused with the fibrous pericardium that provides attachment for the muscle fibers. NMDCO_relaxed.owl UBERON:0000486 biolink:NamedThing multilaminar epithelium Epithelium which consists of more than one layer of epithelial cells that may or may not be in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, ciliated stratified columnar epithelium.[FMA]. NMDCO_relaxed.owl UBERON:0000488 biolink:NamedThing atypical epithelium Epithelium that consists of epithelial cells not arranged in one ore more layers. NMDCO_relaxed.owl UBERON:0001276 biolink:NamedThing epithelium of stomach The epithelial layer of the stomach . NMDCO_relaxed.owl UBERON:0001278 biolink:NamedThing epithelium of large intestine An epithelium that is part of a large intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001778 biolink:NamedThing ciliary epithelium A double layer covering the ciliary body that produces aqueous humor. NMDCO_relaxed.owl UBERON:0001986 biolink:NamedThing endothelium A layer of epithelium that lines the heart, blood vessels (endothelium, vascular), lymph vessels (endothelium, lymphatic), and the serous cavities of the body[MESH]. Simple squamous epithelium which lines blood and lymphatic vessels and the heart[FMA]. NMDCO_relaxed.owl UBERON:0002506 biolink:NamedThing iris epithelium An epithelium that is part of a iris [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003235 biolink:NamedThing epithelium of upper jaw An epithelium that is part of a upper jaw [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003257 biolink:NamedThing yolk sac endoderm The portion of the yolk sac that is derived from endoderm and lines the yolk sac. NMDCO_relaxed.owl UBERON:0003350 biolink:NamedThing epithelium of mucosa A layer of epithelial cells on the surface of the mucosa. NMDCO_relaxed.owl UBERON:0003351 biolink:NamedThing pharyngeal epithelium An epithelium that is part of a pharynx [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003352 biolink:NamedThing epithelium of midgut An epithelium that is part of a midgut. NMDCO_relaxed.owl UBERON:0003353 biolink:NamedThing epithelium of hindgut An epithelium that is part of a hindgut [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003364 biolink:NamedThing epithelium of right lung An epithelium that is part of a right lung [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003365 biolink:NamedThing epithelium of left lung An epithelium that is part of a left lung [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003911 biolink:NamedThing choroid plexus epithelium The epithelial component of the choroid plexus. Consists of cuboidal epithelial cells surrounding a core of capillaries and loose connective tissue. NMDCO_relaxed.owl UBERON:0003914 biolink:NamedThing epithelial tube Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system. NMDCO_relaxed.owl UBERON:0003929 biolink:NamedThing digestive tract epithelium An epithelium that lines the lumen of the digestive tract. NMDCO_relaxed.owl UBERON:0004807 biolink:NamedThing respiratory system epithelium An epithelium that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004808 biolink:NamedThing gastrointestinal system epithelium An epithelium that is part of a digestive system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004815 biolink:NamedThing lower respiratory tract epithelium An epithelium that is part of a lower respiratory tract [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004820 biolink:NamedThing bile duct epithelium Any epithelium that lines one of the bile ducts. NMDCO_relaxed.owl UBERON:0004909 biolink:NamedThing epithelium of gonad An epithelium surrounding a gonad. NMDCO_relaxed.owl UBERON:0004911 biolink:NamedThing epithelium of female gonad An epithelium surrounding an ovary. NMDCO_relaxed.owl UBERON:0005157 biolink:NamedThing epithelial fold An epithelial sheet bent on a linear axis. NMDCO_relaxed.owl UBERON:0005614 biolink:NamedThing lens anterior epithelium A layer of cuboidal epithelial cells bounded anteriorly by the capsule of the lens and posteriorly by the lens cortex. NMDCO_relaxed.owl UBERON:0005636 biolink:NamedThing caecum epithelium An epithelium that is part of a caecum. NMDCO_relaxed.owl UBERON:0005637 biolink:NamedThing pyloric region epithelium An epithelium that is part of a pylorus. NMDCO_relaxed.owl UBERON:0005638 biolink:NamedThing anterior chamber epithelium An epithelium that is part of a anterior chamber of eyeball. NMDCO_relaxed.owl UBERON:0005656 biolink:NamedThing lens vesicle epithelium An epithelium that is part of a lens vesicle. NMDCO_relaxed.owl UBERON:0006913 biolink:NamedThing lip epithelium An epithelium that is part of a lip. NMDCO_relaxed.owl UBERON:0006914 biolink:NamedThing squamous epithelium An epithelium characterised by its most superficial layer consisting of squamous epithelial cells. NMDCO_relaxed.owl UBERON:0006934 biolink:NamedThing sensory epithelium Simple columnar epithelium made up of cells specialized to serve as sensory cells for the reception of external stimuli, as the sensory cells of the cochlea, vestibule, nasal mucosa, and tongue. NMDCO_relaxed.owl UBERON:0007499 biolink:NamedThing epithelial sac An epithelial tube that is open at one end only. NMDCO_relaxed.owl UBERON:0007503 biolink:NamedThing epithelial vesicle A closed epithelium with a lumen. NMDCO_relaxed.owl UBERON:0007601 biolink:NamedThing ciliated epithelium Epithelium bearing vibratile cilia on the free surface. NMDCO_relaxed.owl UBERON:0007625 biolink:NamedThing pigment epithelium of eye Epithelial layer of the retina, ciliary body, or iris composed of cells containing pigment granules. NMDCO_relaxed.owl UBERON:0009970 biolink:NamedThing epithelium of pancreatic duct An epithelium that is part of a pancreatic duct. NMDCO_relaxed.owl UBERON:0010077 biolink:NamedThing cuboidal epithelium An epithelium consisting of cuboidal epithelial cells. NMDCO_relaxed.owl UBERON:0010136 biolink:NamedThing epithelial sheet An epithelial sheet is a flat surface consisting of closely packed epithelial cells. NMDCO_relaxed.owl UBERON:0010303 biolink:NamedThing extraembryonic epithelium An epithelium that is part of a extraembryonic structure. NMDCO_relaxed.owl UBERON:0012274 biolink:NamedThing columnar epithelium An epithelium that consists of columnar epithelial cells. Columnar epithelia are epithelial cells whose heights are at least four times their width. Columnar epithelia are divided into simple (or unilayered), and the rarer stratified (or multi-layered).[WP, modified]. NMDCO_relaxed.owl UBERON:0012481 biolink:NamedThing cloacal epithelium An epithelium that is part of a cloaca. NMDCO_relaxed.owl UBERON:0013636 biolink:NamedThing epithelium of intestinal villus An epithelium that is part of a intestinal villus. NMDCO_relaxed.owl UBERON:0015179 biolink:NamedThing somite boundary epithelium Epithelium located in the intersomitic region. NMDCO_relaxed.owl UBERON:0015716 biolink:NamedThing anal canal epithelium An epithelium that is part of a anal canal. NMDCO_relaxed.owl UBERON:0015808 biolink:NamedThing eye epithelium An epithelium that is part of a camera-type eye. NMDCO_relaxed.owl UBERON:0015833 biolink:NamedThing foregut epithelium An epithelium that is part of a foregut. NMDCO_relaxed.owl UBERON:0016885 biolink:NamedThing epithelium of terminal part of digestive tract Epithelium lining the distalmost portion of the digestive tract. NMDCO_relaxed.owl UBERON:0019204 biolink:NamedThing skin epithelium Any region of epithelium that is part of a skin region. NMDCO_relaxed.owl UBERON:0019304 biolink:NamedThing sensory organ epithelium NMDCO_relaxed.owl UBERON:0034705 biolink:NamedThing developing neuroepithelium An embryonic or larval epithelium that is committed to form part of the nervous system. NMDCO_relaxed.owl UBERON:0034932 biolink:NamedThing epithelium of biliary system The epithelial layer covering the biliary system. This includes the epithelium of the gallbladder (when present) as well as the intrahepatic and extrahepatic bile ducts. NMDCO_relaxed.owl UBERON:0034969 biolink:NamedThing epithelial layer of duct NMDCO_relaxed.owl UBERON:0035037 biolink:NamedThing jaw epithelium NMDCO_relaxed.owl UBERON:0006555 biolink:NamedThing excretory tube A tube that is part of a excretory system. NMDCO_relaxed.owl UBERON:0000118 biolink:NamedThing lung bud Structure derived from foregut that becomes a lung[GO]. NMDCO_relaxed.owl UBERON:0005153 biolink:NamedThing epithelial bud A bud is a protrusion that forms from an epithelial sheet by localized folding. NMDCO_relaxed.owl UBERON:0010081 biolink:NamedThing future common hepatic duct An extrahepatic bile duct that has the potential to develop into a common hepatic duct. NMDCO_relaxed.owl UBERON:0036072 biolink:NamedThing respiratory primordium epithelium NMDCO_relaxed.owl UBERON:0012423 biolink:NamedThing layer of microvilli A layer of microvilli, Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments[GO,modified]. NMDCO_relaxed.owl UBERON:0022303 biolink:NamedThing nervous system cell part layer Single layer of a laminar structure, identified by different density, arrangement or size of cells and processes arranged in flattened layers or lamina[CUMBO]. NMDCO_relaxed.owl UBERON:0000125 biolink:NamedThing neural nucleus A spatially aggregated collection of nerve cell bodies in the CNS, consisting of one or more subpopulations that share cell type, chemical phenotype, and connections, and including nearby cells that share the same cell type, chemical phenotype, and connections. (CUMBO). NMDCO_relaxed.owl UBERON:0002020 biolink:NamedThing gray matter A nervous system structure composed primarily of nerve cell bodies (somas). May also include dendrites and the initial unmyelinated portion of axons. NMDCO_relaxed.owl UBERON:0016550 biolink:NamedThing spinal cord column NMDCO_relaxed.owl UBERON:0016570 biolink:NamedThing lamina of gray matter of spinal cord NMDCO_relaxed.owl UBERON:0034709 biolink:NamedThing hindbrain marginal layer NMDCO_relaxed.owl UBERON:0000126 biolink:NamedThing cranial nerve nucleus Nucleus that receives projections from or contains neurons that send projections through one of the cranial nerves. NMDCO_relaxed.owl UBERON:0002308 biolink:NamedThing nucleus of brain A neural nucleus that is part of the brain. NMDCO_relaxed.owl UBERON:0002925 biolink:NamedThing trigeminal nucleus A nucleus of brain that is part of a trigeminal nuclear complex. NMDCO_relaxed.owl UBERON:0006331 biolink:NamedThing brainstem nucleus A nucleus of brain that is part of a brainstem. NMDCO_relaxed.owl UBERON:0006568 biolink:NamedThing hypothalamic nucleus A nucleus of brain that is part of a hypothalamus. NMDCO_relaxed.owl UBERON:0006569 biolink:NamedThing diencephalic nucleus A nucleus of brain that is part of a diencephalon. NMDCO_relaxed.owl UBERON:0007247 biolink:NamedThing nucleus of superior olivary complex Any of the nuclei that comprise the superior olivary complex (superior olive). This includes both the primary nuclei such as the lateral and medial nuclei, as well as periolivary nuclei. NMDCO_relaxed.owl UBERON:0009661 biolink:NamedThing midbrain nucleus Nucleus located in the midbrain. NMDCO_relaxed.owl UBERON:0009662 biolink:NamedThing hindbrain nucleus Nucleus located within the hindbrain. NMDCO_relaxed.owl UBERON:0000163 biolink:NamedThing embryonic cloaca Endoderm-lined chamber that develops as pouch-like dilation of the caudal end of the hindgut and receives the allantois ventrally and two mesonephric ducts laterally; caudally it ends blindly at the cloacal membrane formed by the union of proctodeal (anal pit) ectoderm and cloacal endoderm, with no intervening mesoderm[MP]. NMDCO_relaxed.owl UBERON:0000166 biolink:NamedThing oral opening The orifice that connects the mouth to the exterior of the body. NMDCO_relaxed.owl UBERON:0012464 biolink:NamedThing cloacal vent The opening of the cloacal chamber to the outside of the organism. Birds maintain a single cloacal opening throughout their lives. NMDCO_relaxed.owl UBERON:0016458 biolink:NamedThing esophageal hiatus A hole in the diaphragm through which the esophagus passes. NMDCO_relaxed.owl UBERON:0036253 biolink:NamedThing orifice of skull NMDCO_relaxed.owl UBERON:0000167 biolink:NamedThing oral cavity Anatomical cavity at the start of the digestive tract that that is enclosed by the mouth. The boundaries and contents vary depending on the species. In vertebrates, the boundaries are the oral opening, the cheeks, the palate and (if present) the palatoglossal arch - if this is not present then the mouth and pharynx form the oropharyngeal cavity. The buccal cavity contains the teeth, tongue and palate (when present). NMDCO_relaxed.owl UBERON:0001731 biolink:NamedThing cavity of pharynx An anatomical space that is enclosed by a pharynx. NMDCO_relaxed.owl UBERON:0002224 biolink:NamedThing thoracic cavity The part of the coelemic cavity lumen that is enclosed by the walls of the thorax. NMDCO_relaxed.owl UBERON:0002553 biolink:NamedThing anatomical cavity Anatomical space which contains portions of one or more body substances and is bounded by the internal surface of one maximally connected anatomical structure. Examples: cranial cavity, pharyngeal recess space, nasal cavity, tooth socket, cavity of serous sac, lumen of stomach, lumen of artery, fornix of vagina. NMDCO_relaxed.owl UBERON:0003684 biolink:NamedThing abdominal cavity The part of the ventral body cavity that is within the abdomen proper (excluding the pelvic cavity). NMDCO_relaxed.owl UBERON:0003842 biolink:NamedThing neural tube lumen An anatomical space that surrounded_by a neural tube. NMDCO_relaxed.owl UBERON:0003886 biolink:NamedThing future coelemic cavity lumen An anatomical cavity that has the potential to develop into a coelemic cavity lumen. NMDCO_relaxed.owl UBERON:0005082 biolink:NamedThing tube lumen A hole in a tube[GO]. NMDCO_relaxed.owl UBERON:0005688 biolink:NamedThing lens vesicle cavity An anatomical cavity that is part of a lens vesicle. NMDCO_relaxed.owl UBERON:0006909 biolink:NamedThing lumen of digestive tract An anatomical space that surrounded_by a digestive tract. NMDCO_relaxed.owl UBERON:0007147 biolink:NamedThing lumen of midgut An anatomical cavity that surrounded_by a midgut. NMDCO_relaxed.owl UBERON:0007148 biolink:NamedThing lumen of hindgut An anatomical cavity that surrounded_by a hindgut. NMDCO_relaxed.owl UBERON:0007158 biolink:NamedThing lumen of anal canal An anatomical cavity that surrounded_by a anal canal. NMDCO_relaxed.owl UBERON:0007159 biolink:NamedThing lumen of colon An anatomical cavity that surrounded_by a colon. NMDCO_relaxed.owl UBERON:0007473 biolink:NamedThing lumen of epithelial sac The space within an epithelial sphere. NMDCO_relaxed.owl UBERON:0008851 biolink:NamedThing ectoplacental cavity Closed space within the ectoplacental cone, formed by the fusion of the parts of the amniotic fold that separate it from the amniotic cavity[MP]. a developmental cavity that exists in some mammals and is derived by division of the proamniotic space; it is further removed from the embryo than the amniotic cavity in some mammals. NMDCO_relaxed.owl UBERON:0009669 biolink:NamedThing embryonic cloacal lumen An anatomical space that surrounded_by a embryonic cloaca. NMDCO_relaxed.owl UBERON:0009670 biolink:NamedThing rectal lumen An anatomical space that surrounded_by a rectum. NMDCO_relaxed.owl UBERON:0009715 biolink:NamedThing stomodeal lumen An anatomical cavity that surrounded_by a stomodeum. NMDCO_relaxed.owl UBERON:0010064 biolink:NamedThing open anatomical space An anatomical space with at least one opening to another space or the exterior. NMDCO_relaxed.owl UBERON:0010161 biolink:NamedThing lumen of blood vessel An anatomical cavity that surrounded_by a blood vessel. NMDCO_relaxed.owl UBERON:0010276 biolink:NamedThing space in vertebral column Any anatomical space that is part of a vertebral column. NMDCO_relaxed.owl UBERON:0011566 biolink:NamedThing lumen of esophagus An anatomical cavity that is part of a esophagus. NMDCO_relaxed.owl UBERON:0011772 biolink:NamedThing lower jaw opening An anatomical space that is part of a bone of lower jaw. NMDCO_relaxed.owl UBERON:0011773 biolink:NamedThing upper jaw opening An anatomical space that is part of a bone of upper jaw. NMDCO_relaxed.owl UBERON:0012463 biolink:NamedThing cloacal lumen An anatomical space that is enclosed by a cloaca. NMDCO_relaxed.owl UBERON:0012465 biolink:NamedThing lumen of terminal part of digestive tract An anatomical space that is enclosed by a terminal part of digestive tract. NMDCO_relaxed.owl UBERON:0012466 biolink:NamedThing extraembryonic cavity NMDCO_relaxed.owl UBERON:0012467 biolink:NamedThing enclosed anatomical space An anatomical space with no opening to another space or to the exterior. NMDCO_relaxed.owl UBERON:0013514 biolink:NamedThing space surrounding organism The space that surrounds an organism. NMDCO_relaxed.owl UBERON:0013525 biolink:NamedThing stomach lumen The anatomical space that is enclosed by a stomach. NMDCO_relaxed.owl UBERON:0013686 biolink:NamedThing anatomical conduit space An anatomical space which is the lumen of some anatomical conduit and connects two or more spaces together[FMA,modified]. NMDCO_relaxed.owl UBERON:0014399 biolink:NamedThing sinusoidal space An anatomical space that is enclosed by a sinusoid. NMDCO_relaxed.owl UBERON:0014704 biolink:NamedThing pleuroperitoneal canal lumen An anatomical space that is enclosed by a pleuroperitoneal canal. NMDCO_relaxed.owl UBERON:0016512 biolink:NamedThing lumen of duodenum An anatomical space that is part of a duodenum. NMDCO_relaxed.owl UBERON:0018543 biolink:NamedThing lumen of intestine The anatomical space within the intestine. NMDCO_relaxed.owl UBERON:0034905 biolink:NamedThing gland lumen NMDCO_relaxed.owl UBERON:0035819 biolink:NamedThing abdominopelvic cavity The part of the ventral body cavity that is within the abdominal segment of the trunk, which encompasses the abdomen proper plus pelvic cavity. NMDCO_relaxed.owl UBERON:0001074 biolink:NamedThing pericardial cavity A potential space between the visceral and parietal layers of the pericardium. NMDCO_relaxed.owl UBERON:0001179 biolink:NamedThing peritoneal cavity Anatomical cavity bounded by visceral and parietal peritoneum. NMDCO_relaxed.owl UBERON:0002323 biolink:NamedThing coelemic cavity lumen The cavity within the body of all animals higher than the coelenterates and certain primitive worms, formed by the splitting of the embryonic mesoderm into two layers. In mammals it forms the peritoneal, pleural, and pericardial cavities. NMDCO_relaxed.owl UBERON:0002402 biolink:NamedThing pleural cavity The fluid-filled cavity that lies between the visceral and parietal pleurae. NMDCO_relaxed.owl UBERON:0002558 biolink:NamedThing organ cavity NMDCO_relaxed.owl UBERON:0004867 biolink:NamedThing orbital cavity Anatomical cavity bounded by the orbital region of the cranium and forming the location of some or all of the eye. NMDCO_relaxed.owl UBERON:0005251 biolink:NamedThing yolk sac cavity An anatomical cavity that is part of a yolk sac [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0007617 biolink:NamedThing synovial cavity of joint An anatomical cavity that surrounded_by a synovial joint. NMDCO_relaxed.owl UBERON:0011565 biolink:NamedThing lumen of gastrointestinal system NMDCO_relaxed.owl UBERON:0012054 biolink:NamedThing myocoele The cavity within a myotome. NMDCO_relaxed.owl UBERON:0013411 biolink:NamedThing cranial cavity Anatomical cavity that is the lumen of the skull and contains the brain. NMDCO_relaxed.owl UBERON:0016509 biolink:NamedThing cavity of right ventricle Luminal space of the right ventricle of the heart. NMDCO_relaxed.owl UBERON:0016513 biolink:NamedThing cavity of left atrium Luminal space of the left atrium of the heart. NMDCO_relaxed.owl UBERON:0016514 biolink:NamedThing cavity of left ventricle Luminal space of the left ventricle of the heart. NMDCO_relaxed.owl UBERON:0016522 biolink:NamedThing cavity of right atrium Luminal space of the right atrium of the heart. NMDCO_relaxed.owl UBERON:0035763 biolink:NamedThing cavity of cardiac chamber NMDCO_relaxed.owl UBERON:0035809 biolink:NamedThing serous cavity NMDCO_relaxed.owl UBERON:0000170 biolink:NamedThing pair of lungs The pair of anatomical structures comprised of a left lung and right lung. NMDCO_relaxed.owl UBERON:0004288 biolink:NamedThing skeleton Anatomical cluster that consists of all the skeletal elements (eg., bone, cartilage, and teeth) of the body. NMDCO_relaxed.owl UBERON:0004770 biolink:NamedThing articular system Anatomical system that consists of all the joints of the body. NMDCO_relaxed.owl UBERON:0036017 biolink:NamedThing regurgitated substance A bodily fluid consisting of the contents of the digestive tract expulsed through the anterior portion of the digestive tract. NMDCO_relaxed.owl UBERON:0036016 biolink:NamedThing honey A sweet viscid material elaborated out of the nectar of flowers in the honey sac of various bees. NMDCO_relaxed.owl UBERON:0002409 biolink:NamedThing pericardial fluid Transudate contained in the pericardial cavity.[FMA]. NMDCO_relaxed.owl UBERON:0006312 biolink:NamedThing ocular refractive media Body substance in a liquid or semi-solid state in the eyeball which serves to refract light. NMDCO_relaxed.owl UBERON:0006535 biolink:NamedThing skin secretion A portion of organism substance that secreted_by a zone of skin. NMDCO_relaxed.owl UBERON:0006537 biolink:NamedThing female reproductive gland secretion A portion of organism substance that is secreted by a female reproductive gland. NMDCO_relaxed.owl UBERON:0006538 biolink:NamedThing respiratory system fluid/secretion A portion of organism substance that secreted_by a respiratory system. NMDCO_relaxed.owl UBERON:0012112 biolink:NamedThing ingested food A substance that is consumed by the organism for food. NMDCO_relaxed.owl UBERON:0022293 biolink:NamedThing reproductive gland secretion A portion of organism substance that is secreted by a reproductive gland. NMDCO_relaxed.owl UBERON:0034873 biolink:NamedThing bodily gas Any substance in the body or expelled from the body that is in a gaseous state. NMDCO_relaxed.owl UBERON:0001087 biolink:NamedThing pleural fluid Transudate contained in the pleural cavity. NMDCO_relaxed.owl UBERON:0000209 biolink:NamedThing tetrapod frontal bone The bone forming the forehead and roof of the eye orbit. NMDCO_relaxed.owl UBERON:0002514 biolink:NamedThing intramembranous bone Bone tissue forms directly within mesenchyme, and does not replace other tissues[TAO]. Intramembranous ossification is the formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified[GO]. Intramembranous ossification is the way flat bones and the shell of a turtle are formed[GO]. Unlike endochondral ossification, cartilage is not present during intramembranous ossification[WP]. NMDCO_relaxed.owl UBERON:0008907 biolink:NamedThing dermal bone Skeletal element that forms superficially in the organism, usually in association with the ectoderm[VSAO]. NMDCO_relaxed.owl UBERON:0012071 biolink:NamedThing palate bone Any bone that is part of a palate. NMDCO_relaxed.owl UBERON:0010428 biolink:NamedThing flat bone A bone that is shaped as a broad flat plate and composed of two thin layers of compact tissue enclosing between them a variable quantity of cancellous tissue, which is the location of red bone marrow. NMDCO_relaxed.owl UBERON:0001676 biolink:NamedThing occipital bone The bone at the lower, posterior part of the skull. NMDCO_relaxed.owl UBERON:0011164 biolink:NamedThing neurocranium bone A bone that is part of a neurocranium [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001679 biolink:NamedThing ethmoid bone A bone in the skull that separates the nasal cavity from the brain. As such, it is located at the roof of the nose, between the two orbits. The cubical bone is lightweight due to a spongy construction. The ethmoid bone is one of the bones that makes up the orbit of the eye[WP]. NMDCO_relaxed.owl UBERON:0000219 biolink:NamedThing vertebral foramen of atlas NMDCO_relaxed.owl UBERON:0008429 biolink:NamedThing cervical vertebral foramen A vertebral foramen that is part of a cervical vertebra. NMDCO_relaxed.owl UBERON:0008432 biolink:NamedThing thoracic vertebral foramen A vertebral foramen that is part of a thoracic vertebra. NMDCO_relaxed.owl UBERON:0013685 biolink:NamedThing foramen of skull Anatomical space that is an opening in a bone of the skull. NMDCO_relaxed.owl UBERON:0011108 biolink:NamedThing synovial joint of pectoral girdle A synovial joint that is part of a pectoral girdle region. NMDCO_relaxed.owl UBERON:0011171 biolink:NamedThing joint connecting upper and lower jaws Synovial joint that articulates bones of upper and lower jaw. NMDCO_relaxed.owl UBERON:0002548 biolink:NamedThing larva A distinct juvenile form many animals undergo before metamorphosis into adults. Animals with indirect development such as insects, amphibians, or cnidarians typically have a larval phase of their life cycle. NMDCO_relaxed.owl UBERON:0003100 biolink:NamedThing female organism Gonochoristic organism that can produce female gametes. NMDCO_relaxed.owl UBERON:0009850 biolink:NamedThing nematode larva A multicellular organism that existence_starts_and_ends_during a nematode larval stage. NMDCO_relaxed.owl UBERON:0009953 biolink:NamedThing post-embryonic organism A multicellular organism that existence_starts_with a post-embryonic stage. NMDCO_relaxed.owl UBERON:0000314 biolink:NamedThing cecum mucosa A mucosa that is part of a cecum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0000317 biolink:NamedThing colonic mucosa Mucosa that is part of a colon. The mucosa of the colon is lined by a simple columnar epithelium with a thin brush border and numerous goblet cells. NMDCO_relaxed.owl UBERON:0004990 biolink:NamedThing mucosa of ascending colon A mucosa that is part of an ascending colon [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004991 biolink:NamedThing mucosa of transverse colon A mucosa that is part of a transverse colon [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004992 biolink:NamedThing mucosa of descending colon A mucosa that is part of a descending colon [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004993 biolink:NamedThing mucosa of sigmoid colon A mucosa that is part of a sigmoid colon [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0000320 biolink:NamedThing duodenal mucosa A mucosa that is part of a duodenum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0000355 biolink:NamedThing pharyngeal mucosa A mucosa that is part of a pharynx [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0000379 biolink:NamedThing tracheal mucosa A mucosa that is part of a respiratory airway. NMDCO_relaxed.owl UBERON:0001204 biolink:NamedThing mucosa of small intestine A mucosa that is part of a small intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001207 biolink:NamedThing mucosa of large intestine A mucosa that is part of a large intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0002469 biolink:NamedThing esophagus mucosa A mucosa that is part of a esophagus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003343 biolink:NamedThing mucosa of oral region A mucosa that is part of a oral opening [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003346 biolink:NamedThing mucosa of rectum A mucosa that is part of a rectum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003729 biolink:NamedThing mouth mucosa A mucous membrane that lines the mouth. NMDCO_relaxed.owl UBERON:0004785 biolink:NamedThing respiratory system mucosa The mucous membrane lining the respiratory tract. NMDCO_relaxed.owl UBERON:0004786 biolink:NamedThing gastrointestinal system mucosa A mucosa that is part of a gastrointestinal system. NMDCO_relaxed.owl UBERON:0004988 biolink:NamedThing mucosa of cystic duct A mucosa that is part of a cystic duct [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004995 biolink:NamedThing mucosa of body of stomach A mucosa that is part of a body of stomach [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004998 biolink:NamedThing mucosa of pylorus A mucosa that is part of a pylorus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005000 biolink:NamedThing mucosa of common bile duct A mucosa that is part of a common bile duct [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005001 biolink:NamedThing mucosa of common hepatic duct A mucosa that is part of a common hepatic duct [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005002 biolink:NamedThing mucosa of right hepatic duct A mucosa that is part of a right hepatic duct [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005003 biolink:NamedThing mucosa of left hepatic duct A mucosa that is part of a left hepatic duct [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005031 biolink:NamedThing mucosa of upper lip A mucosa that is part of a upper lip [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005032 biolink:NamedThing mucosa of lower lip A mucosa that is part of a lower lip [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0012480 biolink:NamedThing cloacal mucosa A mucosa that is part of a cloaca [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0012651 biolink:NamedThing mucosa of gastroduodenal junction A mucosa that is part of a gastroduodenal junction. NMDCO_relaxed.owl UBERON:0019042 biolink:NamedThing reproductive system mucosa NMDCO_relaxed.owl UBERON:0036294 biolink:NamedThing mucosa of lip A mucosa that is part of a lip region [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0000414 biolink:NamedThing mucous gland A gland in which the principal secretory cells are mucus secreting cells. NMDCO_relaxed.owl UBERON:0010047 biolink:NamedThing oral gland Gland of the epithelium lining the oral cavity. The most common are the salivary glands. NMDCO_relaxed.owl UBERON:0010243 biolink:NamedThing merocrine gland An exocrine gland whose secretions are excreted via exocytosis from secretory cells into an epithelial-walled duct or ducts and thence onto a bodily surface or into the lumen; the gland releases its product and no part of the gland is lost or damaged. NMDCO_relaxed.owl UBERON:0019319 biolink:NamedThing exocrine gland of integumental system An exocrine gland that is part of a integumental system. NMDCO_relaxed.owl UBERON:0003294 biolink:NamedThing gland of foregut A gland that is part of a foregut [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0000326 biolink:NamedThing pancreatic juice Pancreatic juice is slightly alkaline and contains numerous enzymes and inactive enzyme precursors including alpha-amylase, chymotrypsinogen, lipase, procarboxypeptidase, proelastase, prophospholipase A2, ribonuclease, and trypsinogen. Its high concentration of bicarbonate ions helps to neutralize the acid from the stomach. NMDCO_relaxed.owl UBERON:0001971 biolink:NamedThing gastric juice NMDCO_relaxed.owl UBERON:0002466 biolink:NamedThing intestine secretion Clear to pale yellow watery secretions from the glands lining the small intestine walls. Secretion is stimulated by the mechanical pressure of partly digested food in the intestine. NMDCO_relaxed.owl UBERON:0004792 biolink:NamedThing secretion of endocrine pancreas A secretion that is part of a endocrine pancreas [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004793 biolink:NamedThing secretion of exocrine pancreas A secretion that is part of a exocrine pancreas [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004794 biolink:NamedThing esophagus secretion A secretion that is part of a esophagus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004795 biolink:NamedThing pancreas secretion A secretion that is part of a pancreas [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0006539 biolink:NamedThing mammary gland fluid/secretion A substance that is secreted by a mammary gland. The substance may differ depending on phase, with colostrum produced during pregancy/early lactation, and milk produced afterwards. NMDCO_relaxed.owl UBERON:0013212 biolink:NamedThing anal sac gland secretion A bodily secretion that is produced by a gland of anal sac. NMDCO_relaxed.owl UBERON:0000328 biolink:NamedThing gut wall The wall of the digestive tract. This encompasses all parts of the digestive tract with the exception of the lumen (cavity). NMDCO_relaxed.owl UBERON:0000415 biolink:NamedThing artery wall An anatomical wall that is part of an artery [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001096 biolink:NamedThing wall of esophagus An anatomical wall that is part of a esophagus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001167 biolink:NamedThing wall of stomach The layered structure that makes up the stomach, typiclly consists of a serous coat, a muscular coat, a mucous membrane, and other tissue layers in between. NMDCO_relaxed.owl UBERON:0001168 biolink:NamedThing wall of small intestine An anatomical wall that is part of a small intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001169 biolink:NamedThing wall of large intestine An anatomical wall that is part of a large intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001262 biolink:NamedThing wall of intestine An anatomical wall that is part of a intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003697 biolink:NamedThing abdominal wall The tissues that surround the organs that are present within the abdominal cavity. The abdominal wall tissue is composed of layers of fat, parietal peritoneum, fascia, and muscles. NMDCO_relaxed.owl UBERON:0004663 biolink:NamedThing aorta wall An anatomical wall that is part of an aorta, enclosing the luminal space. NMDCO_relaxed.owl UBERON:0004784 biolink:NamedThing heart ventricle wall An anatomical wall that is part of a cardiac ventricle [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0036351 biolink:NamedThing wall of brachiocephalic artery NMDCO_relaxed.owl UBERON:0036352 biolink:NamedThing wall of subclavian artery NMDCO_relaxed.owl UBERON:0036422 biolink:NamedThing wall of pulmonary artery NMDCO_relaxed.owl UBERON:0036553 biolink:NamedThing wall of synovial tendon sheath NMDCO_relaxed.owl UBERON:0037094 biolink:NamedThing wall of common carotid artery NMDCO_relaxed.owl UBERON:0000332 biolink:NamedThing yellow bone marrow Bone marrow in which the fat cells predominate in the meshes of the reticular network. NMDCO_relaxed.owl UBERON:0000361 biolink:NamedThing red bone marrow The red vascular substance consisting of connective tissue and blood vessels, containing primitive blood cells, macrophages, megakaryocytes, and fat cells. Red marrow is found in the cavities of many bones. It manufactures and releases leukocytes and erythrocytes into the bloodstream. NMDCO_relaxed.owl UBERON:0000333 biolink:NamedThing intestinal gland A gland that is part of the intestinal mucosa. Examples include the intestinal crypts, duodenal gland[cjm]. NMDCO_relaxed.owl UBERON:0002368 biolink:NamedThing endocrine gland Endocrine glands are glands of the endocrine system that secrete their products directly into the circulatory system rather than through a duct.[WP, modified]. NMDCO_relaxed.owl UBERON:0003295 biolink:NamedThing pharyngeal gland Racemose mucous glands beneath the mucous membrane of the pharynx. NMDCO_relaxed.owl UBERON:0003297 biolink:NamedThing gland of integumental system A gland that is part of a integumental system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003937 biolink:NamedThing reproductive gland Any of the organized aggregations of cells that function as secretory or excretory organs and are associated with reproduction. NMDCO_relaxed.owl UBERON:0004859 biolink:NamedThing eye gland A gland that is part of a eye. The eye is a compound unit which depending on the species may consist of an eyeballs plus associated ducts and integumentary structures. Eye glands therefore include the various types of lacrimal gland, the various types of apocrine and sebaceous glands associated with the eyelid. NMDCO_relaxed.owl UBERON:0005058 biolink:NamedThing hemolymphoid system gland A gland that is part of a hemolymphoid system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005250 biolink:NamedThing stomatodeum gland A gland that is part of a stomodeum. NMDCO_relaxed.owl UBERON:0007771 biolink:NamedThing epidermis gland A gland that is part of a epidermis. NMDCO_relaxed.owl UBERON:0012478 biolink:NamedThing cloacal gland A gland that is part of a cloaca. NMDCO_relaxed.owl UBERON:0013158 biolink:NamedThing foregut-midgut junction gland A gland that is part of a foregut-midgut junction. NMDCO_relaxed.owl UBERON:0015152 biolink:NamedThing gland of ocular region A gland that is typically found in or near the orbital region, in or around either the medial or lateral canthi, and is typically associated with secretions onto the eyeball or associated ducts. Includes the Harderian, nictitans and lacrimal glands. NMDCO_relaxed.owl UBERON:0036225 biolink:NamedThing respiratory system gland Any gland that is part os the respiratory system. NMDCO_relaxed.owl UBERON:0001212 biolink:NamedThing duodenal gland A compound tubular submucosal gland found in that portion of the duodenum which is above the hepatopancreatic sphincter (Sphincter of Oddi). The main function of these glands is to produce a mucus-rich alkaline secretion (containing bicarbonate)[WP]. NMDCO_relaxed.owl UBERON:0008989 biolink:NamedThing submucosal esophageal gland One of the racemose glands in the walls of the esophagus that in humans are small and serve principally to lubricate the food but in some birds secrete a milky fluid on which the young are fed. NMDCO_relaxed.owl UBERON:0000377 biolink:NamedThing maxillary nerve The sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the palate, upper teeth and gingiva, the skin between the palpebral fissure and the mouth, and from the nasal cavity and maxillary sinuses. NMDCO_relaxed.owl UBERON:0011779 biolink:NamedThing nerve of head region A nerve that is part of a head. NMDCO_relaxed.owl UBERON:0001785 biolink:NamedThing cranial nerve Cranial nerves are nerves that emerge directly from the brain, in contrast to spinal nerves, which emerge from segments of the spinal cord. NMDCO_relaxed.owl UBERON:0034728 biolink:NamedThing autonomic nerve The autonomic nerve is a small nerve which carries postganglionic sympathetic and parasympathetic neurons from the zygomaticotemporal nerve; a branch of the maxillary nerve, to the lacrimal nerve; a branch of the ophthalmic nerve. These neurons derive from the superior cervical ganglion and the pterygopalatine ganglion respectively. They will travel to the lacrimal gland via the lacrimal nerve. Parasympathetic will induce lacrimation and vice versa. NMDCO_relaxed.owl UBERON:0036264 biolink:NamedThing zygomaticotemporal nerve The zygomaticotemporal nerve or zygomaticotemporal branch (temporal branch) is derived from the maxillary branch of the trigeminal nerve (Cranial nerve V). It runs along the lateral wall of the orbit in a groove in the zygomatic bone, receives a branch of communication from the lacrimal, and passes through zygomaticotemporal foramen in the zygomatic bone to enter the temporal fossa. It ascends between the bone, and substance of the Temporalis muscle, pierces the temporal fascia about 2.5 cm. above the zygomatic arch, and is distributed to the skin of the side of the forehead, and communicates with the facial nerve and with the auriculotemporal branch of the mandibular nerve. As it pierces the temporal fascia, it gives off a slender twig, which runs between the two layers of the fascia to the lateral angle of the orbit. NMDCO_relaxed.owl UBERON:0000957 biolink:NamedThing lamina Any thin layer or plate. NMDCO_relaxed.owl UBERON:0003714 biolink:NamedThing neural tissue Portion of tissue in the nervous system which consists of neurons and glial cells, and may also contain parts of the vasculature. NMDCO_relaxed.owl UBERON:0005292 biolink:NamedThing extraembryonic tissue Portion of tissue that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo. NMDCO_relaxed.owl UBERON:0007475 biolink:NamedThing matrix-based tissue A tissue whose predominant feature is extracellular matrix which may or may not be highly hydrated or calcified. NMDCO_relaxed.owl UBERON:0007688 biolink:NamedThing anlage Anlagen are populations of contiguous cells, typically arranged in one plane, that are morphologically indistinct, but that already correspond in extent to a later organ/tissue. NMDCO_relaxed.owl UBERON:0015757 biolink:NamedThing heterogeneous tissue NMDCO_relaxed.owl UBERON:0000474 biolink:NamedThing female reproductive system The organs and associated structures associated with bearing offspring in a female animal. NMDCO_relaxed.owl UBERON:0000990 biolink:NamedThing reproductive system Anatomical system that has as its parts the organs concerned with reproduction. NMDCO_relaxed.owl UBERON:0000477 biolink:NamedThing anatomical cluster Anatomical group that has its parts adjacent to one another.|Anatomical group whose component anatomical structures lie in close proximity to each other. NMDCO_relaxed.owl UBERON:0010009 biolink:NamedThing aggregate regional part of brain A regional part of brain consisting of multiple brain regions that are not related through a simple volummetric part of hierarchy, e.g., basal ganglia[NIF]. NMDCO_relaxed.owl UBERON:0015203 biolink:NamedThing non-connected functional system An anatomical group whose component structures share a common function. NMDCO_relaxed.owl UBERON:0001048 biolink:NamedThing primordium Primordia are populations of contiguous cells that are morphologically distinct and already correspond in extent to a later organ/tissue[FBbt, Hartenstein, V. (2004)]. NMDCO_relaxed.owl UBERON:0002329 biolink:NamedThing somite Somites are spheres of epithelial cells that form sequentially along the anterior-posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. NMDCO_relaxed.owl UBERON:0006268 biolink:NamedThing notochordal process A midline cellular cord formed from the migration of mesenchymal cells from the primitive knot. NMDCO_relaxed.owl UBERON:0009145 biolink:NamedThing pharyngeal region of foregut NMDCO_relaxed.owl UBERON:0010312 biolink:NamedThing immature eye Developing anatomical structure that develops into the eyeball and associated structures. NMDCO_relaxed.owl UBERON:0016888 biolink:NamedThing transitional anatomical structure An embryonic anatomical entity that will turn into one or more other anatomical entities, perhaps with other anatomical entities, later in development. NMDCO_relaxed.owl UBERON:0017650 biolink:NamedThing developing mesenchymal structure A mesenchyme-derived anatomical entity undergoing a transtion to become another structure. NMDCO_relaxed.owl UBERON:0006915 biolink:NamedThing stratified squamous epithelium Multilaminar epithelium which consists of more than one layer of squamous cells only one layer of which is in contact with a basement membrane. Examples: keratinized stratified squamous epithelium, epithelium of wall of esophagus.[FMA]. NMDCO_relaxed.owl UBERON:0006920 biolink:NamedThing esophagus squamous epithelium A squamous epithelium that is part of a esophagus. NMDCO_relaxed.owl UBERON:0006921 biolink:NamedThing stomach squamous epithelium A squamous epithelium that is part of a stomach. NMDCO_relaxed.owl UBERON:0000489 biolink:NamedThing cavitated compound organ Compound organ that contains one or more macroscopic anatomical spaces. NMDCO_relaxed.owl UBERON:0015228 biolink:NamedThing circulatory organ A hollow, muscular organ, which, by contracting rhythmically, contributes to the circulation of lymph, blood or analogs. Examples: a chambered vertebrate heart; the tubular peristaltic heart of ascidians; the dorsal vessel of an insect; the lymoh heart of a reptile. NMDCO_relaxed.owl UBERON:0011270 biolink:NamedThing dorsal trunk The part of the trunk that is in the dorsum[cjm]. NMDCO_relaxed.owl UBERON:0000923 biolink:NamedThing germ layer A layer of cells produced during the process of gastrulation during the early development of the animal embryo, which is distinct from other such layers of cells, as an early step of cell differentiation. The three types of germ layers are the endoderm, ectoderm, and mesoderm. NMDCO_relaxed.owl UBERON:0000931 biolink:NamedThing proctodeum Inward fold on the surface of the embryonic ectoderm that develops into an ectodermal terminal part of the digestive tract. NMDCO_relaxed.owl UBERON:0016566 biolink:NamedThing pit An roughly circular indentation in a surface. NMDCO_relaxed.owl UBERON:0000947 biolink:NamedThing aorta The main trunk of the systemic arterial system that carries blood from the heart to all the organs and other structures of the body, bringing oxygenated blood to all parts of the body in the systemic circulation. NMDCO_relaxed.owl UBERON:0003509 biolink:NamedThing arterial blood vessel A blood vessel that is part of the arterial system. Includes artery, arteriole and aorta. NMDCO_relaxed.owl UBERON:0003643 biolink:NamedThing respiratory system arterial blood vessel An arterial blood vessel that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003519 biolink:NamedThing thoracic cavity blood vessel A blood vessel that is part of a thoracic cavity [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003473 biolink:NamedThing thoracic cavity artery An artery that is part of a thoracic cavity[cjm]. NMDCO_relaxed.owl UBERON:0003479 biolink:NamedThing thoracic cavity vein A vein that is part of a thoracic cavity [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0013768 biolink:NamedThing great vessel of heart Great vessels is a term used to refer collectively to the large vessels that bring blood to and from the heart. NMDCO_relaxed.owl UBERON:0002016 biolink:NamedThing pulmonary vein Pulmonary veins are blood vessels that transport blood from the lungs to the heart[GO]. NMDCO_relaxed.owl UBERON:0004087 biolink:NamedThing vena cava Any of the veins that carries deoxygenated blood from a part of the body into the right atrium of the heart. NMDCO_relaxed.owl UBERON:0002359 biolink:NamedThing fibrous pericardium Membrane organ which is attached to the pericardial sac proper and the central tendon of diaphragm and is continuous with the pretracheal fascia.[FMA]. NMDCO_relaxed.owl UBERON:0002406 biolink:NamedThing pericardial sac A double-walled sac containing the heart and the roots of the great vessels. NMDCO_relaxed.owl UBERON:0003827 biolink:NamedThing thoracic segment bone A bone that is part of a thorax [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003830 biolink:NamedThing thoracic segment muscle Any muscle organ that is part of a thorax [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0015008 biolink:NamedThing thoracic vertebra endochondral element A vertebral endochondral element in the thoracic region of the vertebral column. NMDCO_relaxed.owl UBERON:0015204 biolink:NamedThing glandular system A non-connected functional system that is composed primarily of a gland. NMDCO_relaxed.owl UBERON:0000962 biolink:NamedThing nerve of cervical vertebra The cervical nerves are the spinal nerves from the cervical vertebrae. Although there are seven cervical vertebrae (C1-C7), there are eight cervical nerves (C1-C8). All nerves except C8 emerge above their corresponding vertebrae, while the C8 nerve emerges below the C7 vertebra. (In the other portions of the spine, the nerve emerges below the vertebra with the same name. Dorsal (posterior) distribution includes the greater occipital (C2) and third occipital (C3). Ventral (anterior) distribution includes the cervical plexus (C1-C4) and brachial plexus (C5-C8) [WP,unvetted]. NMDCO_relaxed.owl UBERON:0003726 biolink:NamedThing thoracic nerve The twelve spinal nerves on each side of the thorax. They include eleven INTERCOSTAL NERVES and one subcostal nerve. Both sensory and motor, they supply the muscles and skin of the thoracic and abdominal walls. NMDCO_relaxed.owl UBERON:0003727 biolink:NamedThing intercostal nerve The intercostal nerves are the anterior divisions (rami anteriores; ventral divisions) of the thoracic spinal nerves from T1 to T11. Each nerve is connected with the adjoining ganglion of the sympathetic trunk by a gray and a white ramus communicans. The intercostal nerves are distributed chiefly to the thoracic pleura and abdominal peritoneum and differ from the anterior divisions of the other spinal nerves in that each pursues an independent course without plexus formation. The first two nerves supply fibers to the upper limb in addition to their thoracic branches; the next four are limited in their distribution to the parietes of the thorax; the lower five supply the parietes of the thorax and abdomen. The 7th intercostal nerve terminates at the xyphoid process, at the lower end of the sternum. The 10th intercostal nerve terminates at the umbilicus. The twelfth thoracic is distributed to the abdominal wall and groin. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0000963 biolink:NamedThing head sensillum NMDCO_relaxed.owl UBERON:6007240 biolink:NamedThing insect embryonic/larval sensillum Any sensillum (UBERON:6007152) that is part of some larva (UBERON:6001727). NMDCO_relaxed.owl UBERON:6007242 biolink:NamedThing insect embryonic/larval head sensillum Any sensillum (UBERON:6007152) that is part of some larval head (UBERON:6001730). NMDCO_relaxed.owl UBERON:0001201 biolink:NamedThing serosa of stomach The outermost layer of the stomach wall, consisting of layers of connective tissue continuous with the peritoneum. NMDCO_relaxed.owl UBERON:0001206 biolink:NamedThing serosa of small intestine A serous membrane that is part of a small intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001209 biolink:NamedThing serosa of large intestine A serous membrane that is part of a large intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001243 biolink:NamedThing serosa of intestine A serous membrane that is part of a wall of intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001975 biolink:NamedThing serosa of esophagus A serous membrane that is part of a esophagus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0002095 biolink:NamedThing mesentery Anatomical organ component composed of a double layer of serous membrane that suspends a viscus from the body wall or connects adjacent viscera and in doing so conveys blood vessels, lymphatics and nerves to and from the viscera. Examples: greater omentum, broad ligament of uterus, sigmoid mesocolon. NMDCO_relaxed.owl UBERON:0002357 biolink:NamedThing serous pericardium Serous membrane which is divided into parietal and visceral serous pericardium. NMDCO_relaxed.owl UBERON:0003334 biolink:NamedThing serosa of rectum A serous membrane that is part of a rectum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003335 biolink:NamedThing serosa of colon A serous membrane that is part of a colon [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003336 biolink:NamedThing serosa of duodenum A serous membrane that is part of a duodenum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004782 biolink:NamedThing gastrointestinal system serosa A serous membrane that is part of a digestive system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0007616 biolink:NamedThing layer of synovial tissue A thin, loose vascular connective tissue that makes up the membranes surrounding joints and the sheaths protecting tendons (particularly flexor tendons in the hands and feet) where they pass over bony prominences. Synovial tissue contains synovial cells, which secrete a viscous liquid called synovial fluid; this liquid contains protein and hyaluronic acid and serves as a lubricant and nutrient for the joint cartilage surfaces[BTO]. Synovial tissue can be found in tendons (tissues that connect muscle to bone), bursae (fluid-filled, cushioning sacs found in spaces between tendons, ligaments, and bones), and the cavity (hollow enclosed area) that separates the bones of a freely movable joint, such as the knee or elbow[BTO]. NMDCO_relaxed.owl UBERON:0012483 biolink:NamedThing serosa of cloaca A serous membrane that is part of a cloaca [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0000982 biolink:NamedThing skeletal joint Anatomical cluster that consists of two or more adjacent skeletal structures, which may be interconnected by various types of tissue[VSAO].|Anatomical structure that consists of two or more adjacent skeletal structures, which may be interconnected by various types of tissue[VSAO]. NMDCO_relaxed.owl UBERON:0004905 biolink:NamedThing articulation Anatomical cluster that connects two or more adjacent skeletal elements or hardened body parts.|Anatomical structure that connects two or more adjacent skeletal elements or hardened body parts. NMDCO_relaxed.owl UBERON:0000988 biolink:NamedThing pons The part of the central nervous system lying between the medulla oblongata and the midbrain, ventral to the cerebellum. NMDCO_relaxed.owl UBERON:0001890 biolink:NamedThing forebrain The most anterior region of the brain including both the telencephalon and diencephalon. NMDCO_relaxed.owl UBERON:0001898 biolink:NamedThing hypothalamus A specialized brain region of the ventral diencephalon arising near the end of the segmentation period; the embryonic hypothalamic region will give rise to the posterior pituitary gland as well as a number of brain nuclei. [ZFA]. One of the most important functions of the hypothalamus is to link the nervous system to the endocrine system via the pituitary gland (hypophysis).[Wikipedia]. NMDCO_relaxed.owl UBERON:0001943 biolink:NamedThing midbrain tegmentum Ventral part of the midbrain, separated from the hindbrain by the isthmus[ISBN:0471888893]. Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle[FMA] The part of the midbrain extending from the substantia nigra to the cerebral aqueduct in a horizontal section of the midbrain. It forms the floor of the midbrain that surrounds the cerebral aqueduct[WP]. NMDCO_relaxed.owl UBERON:0002028 biolink:NamedThing hindbrain The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata (From: Neuroanatomy of the Zebrafish Brain)[ZFA]. Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata[FMA]. NMDCO_relaxed.owl UBERON:0002275 biolink:NamedThing reticular formation A composite substructure of the brainstem that consists of the midbrain reticular formation, the pontine reticular formation and the medullary reticular formation ( Carpenter-1983 ). NMDCO_relaxed.owl UBERON:8440015 biolink:NamedThing noradrenergic cell groups Collections of neurons in the central nervous system that have been demonstrated by histochemical fluorescence to contain the neurotransmitter norepinephrine (noradrenalin). NMDCO_relaxed.owl UBERON:0001007 biolink:NamedThing digestive system Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes. NMDCO_relaxed.owl UBERON:0001009 biolink:NamedThing circulatory system Organ system that passes nutrients (such as amino acids and electrolytes), gases, hormones, blood cells, etc. to and from cells in the body to help fight diseases and help stabilize body temperature and pH to maintain homeostasis[WP]. NMDCO_relaxed.owl UBERON:0002193 biolink:NamedThing hemolymphoid system Anatomical cluster consisting of the hematopoietic system and the lymphoid system, or its analogs. NMDCO_relaxed.owl UBERON:0002204 biolink:NamedThing musculoskeletal system Anatomical system that consists of the muscular and skeletal systems. NMDCO_relaxed.owl UBERON:0002465 biolink:NamedThing lymphoid system The lymphatic system in vertebrates is a network of conduits that carry a clear fluid called lymph. It also includes the lymphoid tissue through which the lymph travels. Lymphoid tissue is found in many organs, particularly the lymph nodes, and in the lymphoid follicles associated with the digestive system such as the tonsils. The system also includes all the structures dedicated to the circulation and production of lymphocytes, which includes the spleen, thymus, bone marrow and the lymphoid tissue associated with the digestive system[WP]. NMDCO_relaxed.owl UBERON:0004122 biolink:NamedThing genitourinary system Anatomical system that has as its parts the organs concerned with the production and excretion of urine and those concerned with reproduction. NMDCO_relaxed.owl UBERON:0004456 biolink:NamedThing entire sense organ system Sum of all sensory systems in an organism. NMDCO_relaxed.owl UBERON:0005409 biolink:NamedThing alimentary part of gastrointestinal system The part of the digestive system that excludes the hepatobiliary system. NMDCO_relaxed.owl UBERON:0007798 biolink:NamedThing vascular system Anatomical system that consists of all blood and lymph vessels. NMDCO_relaxed.owl UBERON:8450002 biolink:NamedThing excretory system An anatomical system that eliminates waste products that arise as a result of metabolic activity. NMDCO_relaxed.owl UBERON:0000991 biolink:NamedThing gonad Reproductive organ that produces and releases eggs (ovary) or sperm (testis). NMDCO_relaxed.owl UBERON:0003134 biolink:NamedThing female reproductive organ A female organ involved in reproduction. NMDCO_relaxed.owl UBERON:0004175 biolink:NamedThing internal genitalia The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals. NMDCO_relaxed.owl UBERON:0004176 biolink:NamedThing external genitalia The external genitalia are the outer sex organs, such as the penis or vulva in mammals. NMDCO_relaxed.owl UBERON:0009117 biolink:NamedThing indifferent gonad A gonad prior to differentiating into a definitive testis or ovary. NMDCO_relaxed.owl UBERON:0003975 biolink:NamedThing internal female genitalia The internal feminine genital organs, including the ovaries, uterine tubes, uterus, uterine cervix, and vagina. NMDCO_relaxed.owl UBERON:0005056 biolink:NamedThing external female genitalia An external genitalia that is part of a female reproductive system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:3000961 biolink:NamedThing external integument structure Structures of the dermis, epidermis, glands and pigment cells recognizable on the external surfaces of the integument. NMDCO_relaxed.owl UBERON:3000972 biolink:NamedThing head external integument structure Dermal, epidermal, glandular and pigment structures of the external head integument. NMDCO_relaxed.owl UBERON:3000977 biolink:NamedThing body external integument structure Dermal, epidermal, glandular and pigment structures of the body integument. NMDCO_relaxed.owl UBERON:3000982 biolink:NamedThing tail external integument structure Dermal, epidermal, glandular and pigment structures of the tail integument. NMDCO_relaxed.owl UBERON:0001008 biolink:NamedThing renal system The renal system in an anatomical system that maintains fluid balance and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. NMDCO_relaxed.owl UBERON:0011822 biolink:NamedThing dense irregular connective tissue Irregular connective tissue is an irregular connective tissue, the intercellular matrix of which contains a dense irregular network of collagen and elastic fiber bundles. Examples: connective tissue of peritoneum, connective tissue of fibrous pericardium. NMDCO_relaxed.owl UBERON:0011824 biolink:NamedThing fibrous connective tissue NMDCO_relaxed.owl UBERON:0001021 biolink:NamedThing nerve An enclosed, cable-like bundle of axons in the peripheral nervous system originating in a nerve root in the central nervous system (or a condensed nervous structure) connecting with peripheral structures. NMDCO_relaxed.owl UBERON:0004904 biolink:NamedThing neuron projection bundle connecting eye with brain A neuron projection bundle that connects the retina or its analog in the eye with the brain. This includes the vertebrate optic nerve (not truly a nerve) as well as analogous structures such as the Bolwig nerve in Drosophila. NMDCO_relaxed.owl UBERON:0001027 biolink:NamedThing sensory nerve A nerve that transmits from sensory receptors on the surface of the body to the central nervous system. NMDCO_relaxed.owl UBERON:0001884 biolink:NamedThing phrenic nerve A nerve that arises from the caudal cervical nerves and is primarily the motor nerve of the diaphragm but also sends sensory fibers to the pericardium. NMDCO_relaxed.owl UBERON:0003429 biolink:NamedThing abdomen nerve A nerve that is part of an abdomen [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003430 biolink:NamedThing neck nerve A nerve that is part of a neck [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003438 biolink:NamedThing iris nerve Any nerve that innervates the iris. NMDCO_relaxed.owl UBERON:0003439 biolink:NamedThing nerve of trunk region A nerve that is part of the trunk region of the body (not to be confused with a nerve trunk). NMDCO_relaxed.owl UBERON:0003443 biolink:NamedThing thoracic cavity nerve A nerve that is located in a thoracic cavity [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003715 biolink:NamedThing splanchnic nerve The major nerves supplying sympathetic innervation to the abdomen, including the greater, lesser, and lowest (or smallest) splanchnic nerves that are formed by preganglionic fibers from the spinal cord which pass through the paravertebral ganglia and then to the celiac ganglia and plexuses and the lumbar splanchnic nerves carry fibers which pass through the lumbar paravertebral ganglia to the mesenteric and hypogastric ganglia. NMDCO_relaxed.owl UBERON:0003824 biolink:NamedThing nerve of thoracic segment A nerve that is part of a thorax [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003825 biolink:NamedThing nerve of abdominal segment A nerve that is part of an abdominal segment of trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004215 biolink:NamedThing back nerve A nerve that is part of a back [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0034729 biolink:NamedThing sympathetic nerve NMDCO_relaxed.owl UBERON:0001040 biolink:NamedThing yolk sac A sac-like expansion of the ventral wall of the intestine, narrowed into a yolk stalk near the body[Hyman's]. Membranous sac attached to an embryo, providing early nourishment in the form of yolk in bony fishes, sharks, reptiles, birds, and primitive mammals. It functions as the developmental circulatory system of the human embryo, before internal circulation begins. In the mouse, the yolk sac is the first site of blood formation, generating primitive macrophages and erythrocytes[WP]. NMDCO_relaxed.owl UBERON:0005631 biolink:NamedThing extraembryonic membrane Intrinsic membrane that arises from embryonic germ layers and grow to surround the developing embryo. NMDCO_relaxed.owl UBERON:0004912 biolink:NamedThing biliary bud NMDCO_relaxed.owl UBERON:0008836 biolink:NamedThing liver bud NMDCO_relaxed.owl UBERON:0001042 biolink:NamedThing chordate pharynx A portion of the respiratory and digestive tracts; its distal limit is the superior part of the esophagus and it connects the nasal and oral cavities with the esophagus and larynx; it contains the valleculae and the pyriform recesses; its upper limits are the nasal cavity and cranial base.[FEED]. NMDCO_relaxed.owl UBERON:0015410 biolink:NamedThing heart plus pericardium NMDCO_relaxed.owl UBERON:0003915 biolink:NamedThing endothelial tube Any endothelium that has the quality of being cylindrical [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0007500 biolink:NamedThing epithelial tube open at both ends An epithelial tube open at both ends that allows fluid flow. NMDCO_relaxed.owl UBERON:0003055 biolink:NamedThing periderm A temporary epithelium that derives from the outer layer of the ectdoerm and is shed once the inner layer differentiates to form a true epidermis. NMDCO_relaxed.owl UBERON:0013694 biolink:NamedThing brain endothelium Vascular endothelium found in blood vessels of the blood-brain-barrier. NMDCO_relaxed.owl UBERON:0016879 biolink:NamedThing future central nervous system Primordium that develops into the central nervous system. NMDCO_relaxed.owl UBERON:0005068 biolink:NamedThing neural rod A solid rod of neurectoderm derived from the neural keel. The neural rod is roughly circular in cross section. Neural rod formation occurs during primary neurulation in teleosts[GO]. An intermediate stage in the development of the central nervous system present during the segmentation period; the neural rod is roughly cylindrical in shape, forms from the neural keel, and is not yet hollowed out into the neural tube[ZFIN]. NMDCO_relaxed.owl UBERON:0007135 biolink:NamedThing neural keel An intermediate stage (between the neural plate and neural rod) during the early segmentation period in the morphogenesis of the central nervous system primordium; the keel is roughly triangular shaped in cross section. NMDCO_relaxed.owl UBERON:0007284 biolink:NamedThing presumptive neural plate A presumptive structure that has the potential to develop into a neural plate. NMDCO_relaxed.owl UBERON:0001084 biolink:NamedThing skin of head A zone of skin that is part of a head [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001085 biolink:NamedThing skin of trunk A zone of skin that is part of a trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001417 biolink:NamedThing skin of neck A zone of skin that is part of a neck [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001418 biolink:NamedThing skin of thorax A zone of skin that is part of a thorax [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001458 biolink:NamedThing skin of lip A zone of skin that is part of a lip [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003534 biolink:NamedThing tail skin A zone of skin that is part of a tail [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003836 biolink:NamedThing abdominal segment skin A skin of body that is part of an abdominal segment of trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0012180 biolink:NamedThing head or neck skin A zone of skin that is part of a craniocervical region. NMDCO_relaxed.owl UBERON:0018150 biolink:NamedThing skin of lower lip A zone of skin that is part of a lower lip. NMDCO_relaxed.owl UBERON:0018151 biolink:NamedThing skin of upper lip A zone of skin that is part of a upper lip. NMDCO_relaxed.owl UBERON:8480025 biolink:NamedThing skin of clavicle region A zone of skin that is above the clavicle zone in the pectoral girdle region. NMDCO_relaxed.owl UBERON:8480029 biolink:NamedThing skin of external genitalia A zone of skin that is part of the external genitalia. NMDCO_relaxed.owl UBERON:8480074 biolink:NamedThing skin of gonad A zone of skin part of some gonad. NMDCO_relaxed.owl UBERON:0001070 biolink:NamedThing external carotid artery A terminal branch of the left or right common carotid artery which supplies oxygenated blood to to the throat, neck glands, tongue, face, mouth, ear, scalp and dura mater of the meninges[MP]. NMDCO_relaxed.owl UBERON:0001071 biolink:NamedThing superficial cervical artery It ascends beneath the anterior margin of the trapezius, distributing branches to it, and to the neighboring muscles and lymph glands in the neck, and anastomosing with the superficial branch of the descending branch of the occipital artery. NMDCO_relaxed.owl UBERON:0012320 biolink:NamedThing cervical artery An artery of the neck. NMDCO_relaxed.owl UBERON:0012321 biolink:NamedThing deep cervical artery The deep cervical artery (Profunda cervicalis) is an artery of the neck. NMDCO_relaxed.owl UBERON:0012324 biolink:NamedThing transverse cervical artery The transverse cervical artery (transverse artery of neck, transversa colli artery) is a branch of the thyrocervical trunk, running at a higher level than the suprascapular artery. NMDCO_relaxed.owl UBERON:0001072 biolink:NamedThing posterior vena cava A vein that carries deoxygenated blood from the lower half of the body into the right atrium of the heart. NMDCO_relaxed.owl UBERON:0001585 biolink:NamedThing anterior vena cava A vein that carries deoxygenated blood from the upper half of the body into the right atrium of the heart. NMDCO_relaxed.owl UBERON:0001073 biolink:NamedThing ileocecal junction A point along the course of the gastrointestinal tract where the small intestine (ileum) ends as it opens into the cecal portion of the large intestine; occurs usually within the iliac fossa, demarcated internally as the ileocecal orifice. NMDCO_relaxed.owl UBERON:0006235 biolink:NamedThing foregut-midgut junction An anatomical junctions that overlaps the foregut and midgut. NMDCO_relaxed.owl UBERON:0006264 biolink:NamedThing mouth-foregut junction An anatomical junctions that overlaps the mouth and foregut. NMDCO_relaxed.owl UBERON:0012650 biolink:NamedThing gastroduodenal junction An anatomical junction that connects a stomach and connects a duodenum. NMDCO_relaxed.owl UBERON:0015178 biolink:NamedThing somite border A region of somite adjacent to presomitic mesoderm. NMDCO_relaxed.owl UBERON:0015485 biolink:NamedThing choledocho-duodenal junction Hat part of the duodenal wall traversed by the ductus choledochus, ductus pancreaticus, and ampulla. NMDCO_relaxed.owl UBERON:0036214 biolink:NamedThing rectosigmoid junction An anatomical junction that is between the sigmoid colon and rectum. NMDCO_relaxed.owl UBERON:1100000 biolink:NamedThing digestive tract junction An anatomical junction between two parts of the digestive tract. NMDCO_relaxed.owl UBERON:8410016 biolink:NamedThing descending sigmoid junction The anatomical junction between the descending colon and the sigmoid colon. NMDCO_relaxed.owl UBERON:8410024 biolink:NamedThing intestinal junction An anatomical junction between two parts of the intestine. NMDCO_relaxed.owl UBERON:0001136 biolink:NamedThing mesothelium Simple squamous epithelium of mesodermal origin which lines serous membranes. Examples: mesothelium of pleura, mesothelium of peritoneum[FMA]. Wikipedia: The mesothelium is a membrane that forms the lining of several body cavities: the pleura (thoracal cavity), peritoneum (abdominal cavity including the mesentery) and pericardium (heart sac). Mesothelial tissue also surrounds the male internal reproductive organs (the tunica vaginalis testis) and covers the internal reproductive organs of women (the tunica serosa uteri). NMDCO_relaxed.owl UBERON:0002166 biolink:NamedThing endocardium of atrium Endocardium that is part of the atrium. NMDCO_relaxed.owl UBERON:0005243 biolink:NamedThing interventricular septum endocardium An endocardium that is part of a interventricular septum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0034903 biolink:NamedThing left atrium endocardium Endocardium that is part of the left atrium. NMDCO_relaxed.owl UBERON:0004291 biolink:NamedThing heart rudiment A cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube. NMDCO_relaxed.owl UBERON:0001082 biolink:NamedThing epicardium of ventricle An epicardial layer that lines a cardiac ventricle. NMDCO_relaxed.owl UBERON:0001083 biolink:NamedThing myocardium of ventricle Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer. NMDCO_relaxed.owl UBERON:0002349 biolink:NamedThing myocardium The middle layer of the heart, comprised mainly of striated cardiac muscle fibers. NMDCO_relaxed.owl UBERON:0002302 biolink:NamedThing myocardium of atrium The atrial part of middle layer of the heart, comprised of involuntary muscle. NMDCO_relaxed.owl UBERON:0004265 biolink:NamedThing outflow tract myocardium A myocardium that is part of a outflow tract [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005248 biolink:NamedThing bulbus cordis myocardium A myocardium that is part of a bulbus cordis [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0036290 biolink:NamedThing myocardium of anterior wall of left ventricle NMDCO_relaxed.owl UBERON:0036291 biolink:NamedThing myocardium of anterior wall of right ventricle NMDCO_relaxed.owl UBERON:0001268 biolink:NamedThing peritoneal fluid Transudate contained in the peritoneal cavity. NMDCO_relaxed.owl UBERON:0036244 biolink:NamedThing secretion of serous membrane A transudate found in the serous sac. NMDCO_relaxed.owl UBERON:0034945 biolink:NamedThing excreted gas Any gaseous product of an excretory process. NMDCO_relaxed.owl UBERON:0001092 biolink:NamedThing vertebral bone 1 The first vertebral bone in the vertebral column. NMDCO_relaxed.owl UBERON:0001093 biolink:NamedThing vertebral bone 2 The second vertebral bone in the vertebral column. NMDCO_relaxed.owl UBERON:0001095 biolink:NamedThing caudal vertebra Any vertebral bone that is part of the caudal region of the vertebral column (tail or coccyx). NMDCO_relaxed.owl UBERON:0002347 biolink:NamedThing thoracic vertebra A thoracic vertebra endochondral element that is composed primarily of a bone tissue. NMDCO_relaxed.owl UBERON:0004451 biolink:NamedThing trunk or cervical vertebra A vertebra in the trunk or cervical region. Includes all cervical, thoracic and lumbar vertebrae, but excludes caudal vertebra. NMDCO_relaxed.owl UBERON:0011677 biolink:NamedThing trunk vertebra A vertebra in the trunk region. For tetrapods, includes lumbar and thoracic vertebrae. Excludes caudal/coccygeal vertebra, which are located posteriorly. In tetrapods this includes thoracic, lumbar and sacral vertebrae, and excludes the cervical vertebrae, which are located anteriorly. NMDCO_relaxed.owl UBERON:0004247 biolink:NamedThing bone of dorsum A bone that is part of the dorsal region of an animal. NMDCO_relaxed.owl UBERON:0002413 biolink:NamedThing cervical vertebra A vertebra that is located in the cervical region of the vertebral column. NMDCO_relaxed.owl UBERON:0018142 biolink:NamedThing caudal vertebra endochondral element Any vertebra endochondral element that is part of the caudal region of the vertebral column (tail or coccyx). NMDCO_relaxed.owl UBERON:0013503 biolink:NamedThing caudal vertebra cartilage element A caudal vertebra endochondral element that is composed primarily of cartilage tissue. NMDCO_relaxed.owl UBERON:0013504 biolink:NamedThing caudal vertebra pre-cartilage condensation A caudal vertebra endochondral element that is composed primarily of a pre-cartilage condensation. NMDCO_relaxed.owl UBERON:0001103 biolink:NamedThing diaphragm A thin musculomebranous barrier that separates the abdominal and thoracic cavities. Often used for breathing control. NMDCO_relaxed.owl UBERON:0008243 biolink:NamedThing upper back muscle A muscle of back that is part of a dorsal thoracic segment of trunk. NMDCO_relaxed.owl UBERON:0003831 biolink:NamedThing respiratory system muscle Any muscle organ that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0014398 biolink:NamedThing respiratory muscle Muscle that is part of the respiratory system. NMDCO_relaxed.owl UBERON:0001114 biolink:NamedThing right lobe of liver The right lobe is much larger than the left; the proportion between them being as six to one. It occupies the right hypochondrium, and is separated from the left lobe on its upper surface by the falciform ligament; on its under and posterior surfaces by the left sagittal fossa; and in front by the umbilical notch. It is of a somewhat quadrilateral form, its under and posterior surfaces being marked by three fossæ: the porta and the fossæ for the gall-bladder and inferior vena cava, which separate its left part into two smaller lobes; the quadrate and caudate lobes. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0001115 biolink:NamedThing left lobe of liver The left lobe is smaller and more flattened than the right. It is situated in the epigastric and left hypochondriac regions. Its upper surface is slightly convex and is moulded on to the diaphragm; its under surface presents the gastric impression and omental tuberosity. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0001130 biolink:NamedThing vertebral column Subdivision of skeletal system that consists of all the vertebra and associated skeletal elements and joints in the body[modified from VSAO]. NMDCO_relaxed.owl UBERON:0002517 biolink:NamedThing basicranium The base of skull is the most inferior area of the skull, composed of the endocranium and lower parts of the skull roof. NMDCO_relaxed.owl UBERON:0003128 biolink:NamedThing cranium Upper portion of the skull that excludes the mandible (when present in the organism). NMDCO_relaxed.owl UBERON:0004761 biolink:NamedThing cartilaginous neurocranium The primitive cartilagionous skeletal structure of the fetal skull that grows to envelop the rapidly growing embyonic brain. In humans, the chondrocranium begins forming at 28 days from mesenchymal condensations and is fully formed between week 7 and 9 of fetal development. While the majority of the chondrocranium is succeeded by the bony skull in most higher vertebrates, some components do persist into adulthood.[1] In Cartilagious fishes and Agnathans, the chondrocranium persist throughout life.[2] Embryologically, the chondrocranium represent the basal cranial structure, and lay the base for the formation of the endocranium in higher vertebrates[WP]. NMDCO_relaxed.owl UBERON:0006077 biolink:NamedThing subdivision of vertebral column A collection of all skeletal elements in some subdivision of the vertebral column. NMDCO_relaxed.owl UBERON:0010323 biolink:NamedThing cranial skeletal system Skeletal subdivision of the head including skull (cranium plus mandible), pharyngeal and/or hyoid apparatus. NMDCO_relaxed.owl UBERON:0011137 biolink:NamedThing axial skeletal system Subdivision of the skeletal system which consists of the axial skeleton plus associated joints. NMDCO_relaxed.owl UBERON:0011138 biolink:NamedThing postcranial axial skeletal system Subdivision of the skeletal system which consists of the postcranial axial skeleton plus associated joints. NMDCO_relaxed.owl UBERON:0011158 biolink:NamedThing primary subdivision of skull The skull can be divided into two: the neurocranium and the facial skeleton. NMDCO_relaxed.owl UBERON:0011159 biolink:NamedThing primary subdivision of cranial skeletal system NMDCO_relaxed.owl UBERON:0011249 biolink:NamedThing appendicular skeletal system Subdivision of the skeletal system which consists of the appendicular skeleton plus associated joints. NMDCO_relaxed.owl UBERON:0012072 biolink:NamedThing palatal part of dermatocranium NMDCO_relaxed.owl UBERON:0002036 biolink:NamedThing striated muscle tissue Muscle tissue that contains fibers that are divided by transverse bands into striations. NMDCO_relaxed.owl UBERON:8600006 biolink:NamedThing visceral striated muscle tissue A striated muscle tissue that is associated with soft internal organs (viscera). NMDCO_relaxed.owl UBERON:0001135 biolink:NamedThing smooth muscle tissue Muscle tissue which is unstriated, composed primarily of smooth muscle fibers surrounded by a reticulum of collagen and elastic fibers. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length[GO]. NMDCO_relaxed.owl UBERON:0004667 biolink:NamedThing interventricular septum muscular part The muscular portion of the wall between the two lower chambers of the heart. NMDCO_relaxed.owl UBERON:0016886 biolink:NamedThing muscle tissue of terminal part of digestive tract Any muscle tissue of the distalmost portion of the digestive tract. NMDCO_relaxed.owl UBERON:0001138 biolink:NamedThing superior mesenteric vein In anatomy, the superior mesenteric vein (SMV) is a blood vessel that drains blood from the small intestine. At its termination behind the neck of the pancreas, the SMV combines with the splenic vein to form the hepatic portal vein. The SMV lies to the right of the similarly named artery, the superior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0005617 biolink:NamedThing mesenteric vein A vein that returns blood from the intestines. NMDCO_relaxed.owl UBERON:0001215 biolink:NamedThing inferior mesenteric vein A blood vessel that drains blood from the large intestine that usually terminates when reaching the splenic vein, which goes on to form the portal vein with the superior mesenteric vein (SMV). Anatomical variations include the IMV draining into the confluence of the SMV and splenic vein and the IMV draining in the SMV. The IMV lies to the right of the similarly name artery, the inferior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0001143 biolink:NamedThing hepatic vein Vein that carries blood away from the liver[ZFA]. NMDCO_relaxed.owl UBERON:0002017 biolink:NamedThing portal vein A vein that conducts blood from the digestive organs, spleen, pancreas, and gallbladder to the liver[BTO]. NMDCO_relaxed.owl UBERON:0003476 biolink:NamedThing respiratory system venous blood vessel A vein that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003477 biolink:NamedThing vein of upper lip The inferior labial vein is the vein receiving blood from the upper lip. NMDCO_relaxed.owl UBERON:0003478 biolink:NamedThing vein of lower lip The inferior labial vein is the vein receiving blood from the lower lip. NMDCO_relaxed.owl UBERON:0003481 biolink:NamedThing tail vein A vein that is part of a tail [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003711 biolink:NamedThing brachiocephalic vein The left and right brachiocephalic veins in the upper chest are formed by the union of each corresponding internal jugular vein and subclavian vein. This is at the level of the sternoclavicular joint. These great vessels merge to form the superior vena cava. The brachiocephalic veins are the major veins returning blood to the superior vena cava. NMDCO_relaxed.owl UBERON:0003713 biolink:NamedThing splenic vein A vein arising from the splenic trabecular vein in the hilum of the spleen that drains into the portal vein. NMDCO_relaxed.owl UBERON:0003848 biolink:NamedThing gonadal vein In medicine, gonadal vein refers to the blood vessel that carrying blood away from the gonad (testis, ovary) toward the heart. Females : ovarian vein Males : testicular vein [WP,unvetted]. NMDCO_relaxed.owl UBERON:0004148 biolink:NamedThing cardiac vein Vein of heart that drains the myocardium. NMDCO_relaxed.owl UBERON:0004711 biolink:NamedThing jugular vein The jugular veins are veins that bring deoxygenated blood from the head back to the heart via the superior vena cava. NMDCO_relaxed.owl UBERON:0005194 biolink:NamedThing thoracic vein A vein that is part of a thorax [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005487 biolink:NamedThing vitelline vein The paired veins that carry blood from the yolk sac back to the embryo. NMDCO_relaxed.owl UBERON:0006686 biolink:NamedThing spinal vein A vein that is part of a vertebral column. NMDCO_relaxed.owl UBERON:0009141 biolink:NamedThing craniocervical region vein A vein that is part of a craniocervical region. NMDCO_relaxed.owl UBERON:0010400 biolink:NamedThing spleen trabecular vein One of the veins that feed the splenic vein. NMDCO_relaxed.owl UBERON:0012193 biolink:NamedThing phrenic vein The veins that run parallel to the phrenic arteries which include the two superior and two inferior phrenic veins. NMDCO_relaxed.owl UBERON:0013126 biolink:NamedThing vein of abdomen A vein that is part of a abdomen. NMDCO_relaxed.owl UBERON:0013136 biolink:NamedThing vein of lip A vein that drains a lip. NMDCO_relaxed.owl UBERON:0013140 biolink:NamedThing systemic vein Any vein within the general circulation that transports blood back to the right atrium of the heart. NMDCO_relaxed.owl UBERON:0035546 biolink:NamedThing uveal vein NMDCO_relaxed.owl UBERON:0035550 biolink:NamedThing superficial vein Any of the veins carrying deoxygenated blood from the subcutaneous tissue layers. NMDCO_relaxed.owl UBERON:0035552 biolink:NamedThing deep vein A blood vessel carrying deoxygenated blood far beneath the skin usually accompanying an artery. NMDCO_relaxed.owl UBERON:0039228 biolink:NamedThing sigmoid vein NMDCO_relaxed.owl UBERON:0015481 biolink:NamedThing left hepatic artery A hepatic artery that is part of a left lobe of liver. NMDCO_relaxed.owl UBERON:0015482 biolink:NamedThing right hepatic artery A hepatic artery that is part of a right lobe of liver. NMDCO_relaxed.owl UBERON:0039222 biolink:NamedThing cystic artery An artery that supplies oxygenated blood to the cystic duct. NMDCO_relaxed.owl UBERON:0001152 biolink:NamedThing cystic duct The tubular structure that conducts gall bladder contents from the gall bladder to the common bile duct. NMDCO_relaxed.owl UBERON:0003928 biolink:NamedThing digestive system duct A duct that is part of a digestive system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004913 biolink:NamedThing hepatopancreatic ampulla A dilation of the duodenal papilla that is the opening of the juncture of the common bile duct and the main pancreatic duct. NMDCO_relaxed.owl UBERON:0014716 biolink:NamedThing interlobular duct A duct that is located between lobules, within the thin connective tissue septa that separate lobules. All interlobular ducts are excretory. NMDCO_relaxed.owl UBERON:0014719 biolink:NamedThing intralobular duct A duct that is located within a lobule, with no more connective tissue intervening between ducts and secretory units (i.e., acini or tubules) than between adjacent secretory units. Intercalated and striated ducts are intralobular. NMDCO_relaxed.owl UBERON:0014720 biolink:NamedThing interlobar duct A duct that is located between lobes, within conspicuous, thick connective tissue septa that separate lobes. All interlobar ducts are excretory. NMDCO_relaxed.owl UBERON:0035050 biolink:NamedThing excretory duct NMDCO_relaxed.owl UBERON:0003703 biolink:NamedThing extrahepatic bile duct Passages external to the liver for the conveyance of bile. These include the common bile duct and the common hepatic duct. NMDCO_relaxed.owl UBERON:0001174 biolink:NamedThing common bile duct The part of the biliary tree formed by the union of the cystic duct and the common hepatic duct. NMDCO_relaxed.owl UBERON:0001175 biolink:NamedThing common hepatic duct Predominantly extrahepatic bile duct which is formed by the junction of the right and left hepatic ducts, which are predominantly intrahepatic, and, in turn, joins the cystic duct to form the common bile duct[GAID]. The common hepatic duct is the duct formed by the convergence of the right hepatic duct (which drains bile from the right functional lobe of the liver) and the left hepatic duct (which drains bile from the left functional lobe of the liver). The common hepatic duct then joins the cystic duct coming from the gallbladder to form the common bile duct[WP]. NMDCO_relaxed.owl UBERON:0001176 biolink:NamedThing right hepatic duct The duct that drains bile from the right half of the liver and joins the left hepatic duct to form the common hepatic duct. NMDCO_relaxed.owl UBERON:0001177 biolink:NamedThing left hepatic duct The duct that drains bile from the left half of the liver and joins the right hepatic duct to form the common hepatic duct. NMDCO_relaxed.owl UBERON:0001161 biolink:NamedThing body of stomach The body of stomach is the part of the stomach that lies between the fundus above and the pyloric antrum below; its boundaries are poorly defined[GO]. NMDCO_relaxed.owl UBERON:0001165 biolink:NamedThing pyloric antrum The area at the bottom of the stomach on the caudal side of the pyloric canal that contains gastrin-producing G cells, which stimulate acid production, and the luminal pH-sensitive population of somatostatin-producing D cells. NMDCO_relaxed.owl UBERON:0008858 biolink:NamedThing pyloric canal The short narrow part of the stomach extending from the pyloric antrum to the pyloric sphincter. NMDCO_relaxed.owl UBERON:0001170 biolink:NamedThing mesentery of small intestine The peritoneum responsible for connecting the jejunum and ileum (parts of the small intestine) to the back wall of the abdomen. Between the two sheets of peritoneum are blood vessels, lymph vessels, and nerves. This allows these parts of the small intestine to move relatively freely within the abdominopelvic cavity. The brain, however, cannot map sensation accurately, so sensation is usually referred to the midline, an example of referred pain[WP]. NMDCO_relaxed.owl UBERON:0003281 biolink:NamedThing mesentery of stomach The portion of the primitive mesentery that encloses the stomach; from its dorsal sheet, the greater omentum develops, and from its ventral sheet, the lesser omentum. NMDCO_relaxed.owl UBERON:0003282 biolink:NamedThing mesentery of heart A mesentery that surrounds the heart. NMDCO_relaxed.owl UBERON:0003283 biolink:NamedThing mesentery of oesophagus A mesentery that is part of a esophagus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003284 biolink:NamedThing mesentery of midgut A mesentery that is part of a midgut [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003393 biolink:NamedThing mesentery of urinary system A mesentery that is part of a urinary system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003394 biolink:NamedThing mesentery of hindgut A mesentery that is part of a hindgut [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003395 biolink:NamedThing mesentery of rectum A mesentery that is part of a rectum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003396 biolink:NamedThing mesentery of colon A mesentery that is part of a colon [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003397 biolink:NamedThing mesentery of duodenum A mesentery that is part of a duodenum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004854 biolink:NamedThing gastrointestinal system mesentery A mesentery that is part of a digestive system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005677 biolink:NamedThing caecum mesentery A mesentery that is part of a caecum. NMDCO_relaxed.owl UBERON:0007826 biolink:NamedThing peritoneal mesentery Mesentery that is located in the peritoneum. NMDCO_relaxed.owl UBERON:0009483 biolink:NamedThing mesentery of foregut-midgut junction A mesentery that is part of a foregut-midgut junction. NMDCO_relaxed.owl UBERON:0009664 biolink:NamedThing gut mesentery NMDCO_relaxed.owl UBERON:0011858 biolink:NamedThing acinus of exocrine gland An acinus that is part of a exocrine gland. NMDCO_relaxed.owl UBERON:0013232 biolink:NamedThing serous acinus The secretory unit of a serous gland. The acinar portion is composed of serous secreting cells. NMDCO_relaxed.owl UBERON:0014717 biolink:NamedThing mucous acinus The secretory unit of a mucous gland. The acinar portion is composed of mucous secreting cells. NMDCO_relaxed.owl UBERON:8600012 biolink:NamedThing submucosal gland acinus A spherical or tubular structure in a submucosal gland that produces and secretes mucus and other substances into the ducts leading to the surface epithelium. NMDCO_relaxed.owl UBERON:0002425 biolink:NamedThing visceral serous pericardium Visceral serous membrane which is continuous with the parietal serous pericardium and is attached to the myocardium[FMA]. NMDCO_relaxed.owl UBERON:0001183 biolink:NamedThing inferior mesenteric artery Mesenteric artery that supplies the large intestine from the left colic (or splenic) flexure to the upper part of the rectum, which includes the descending colon, the sigmoid colon, and part of the rectum. Proximally, its territory of distribution overlaps (forms a watershed) with the middle colic artery, and therefore the superior mesenteric artery. The SMA and IMA anastomose via the marginal artery (artery of Drummond). The territory of distribution of the IMA is more or less equivalent to the embryonic hindgut. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0005616 biolink:NamedThing mesenteric artery Arteries which arise from the abdominal aorta and distribute to most of the intestines. NMDCO_relaxed.owl UBERON:0035039 biolink:NamedThing rectal artery NMDCO_relaxed.owl UBERON:0001190 biolink:NamedThing ovarian artery An artery that supplies an ovary. NMDCO_relaxed.owl UBERON:0001193 biolink:NamedThing hepatic artery An artery that supplies the liver. NMDCO_relaxed.owl UBERON:0001194 biolink:NamedThing splenic artery An artery that supplies the spleen. NMDCO_relaxed.owl UBERON:0001612 biolink:NamedThing facial artery A branch of the external carotid artery that supplies structures of the face. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0001616 biolink:NamedThing maxillary artery An artery that supplies deep structures of the face. It comes just out behind the neck of the mandible. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0001651 biolink:NamedThing right pulmonary artery The pulmonary artery that supplies the right lung. NMDCO_relaxed.owl UBERON:0001652 biolink:NamedThing left pulmonary artery The pulmonary artery that supplies the left lung. NMDCO_relaxed.owl UBERON:0002333 biolink:NamedThing pulmonary trunk An arterial trunk which is continuous with the heart and branches into the pulmonary arteries. NMDCO_relaxed.owl UBERON:0002457 biolink:NamedThing intersomitic artery The small branching sprouts of the dorsal aorta that grow across the medial surface of the somite, turn right angles to grow over that surface and then fuse with other sprouts and form the vertebral arteries adjacent to the neural tube; the intersomitic arteries supply the body wall and persist in the adult as the posterior intercostal, subcostal and the lumbar arteries. NMDCO_relaxed.owl UBERON:0002458 biolink:NamedThing spinal artery Arteries that supply the spinal cord. NMDCO_relaxed.owl UBERON:0003086 biolink:NamedThing caudal artery Extension of the dorsal aorta in the tail. NMDCO_relaxed.owl UBERON:0003469 biolink:NamedThing respiratory system artery An artery that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003470 biolink:NamedThing artery of upper lip The superior labial artery (superior labial branch of facial artery) is larger and more tortuous than the inferior labial artery. It follows a similar course along the edge of the upper lip, lying between the mucous membrane and the Orbicularis oris, and anastomoses with the artery of the opposite side. It supplies the upper lip, and gives off in its course two or three vessels which ascend to the nose; a septal branch ramifies on the nasal septum as far as the point of the nose, and an alar branch supplies the ala of the nose. NMDCO_relaxed.owl UBERON:0003471 biolink:NamedThing artery of lower lip The inferior labial artery (inferior labial branch of facial artery) arises near the angle of the mouth; it passes upward and forward beneath the Triangularis and, penetrating the Orbicularis oris, runs in a tortuous course along the edge of the lower lip between this muscle and the mucous membrane. It supplies the labial glands, the mucous membrane, and the muscles of the lower lip; and anastomoses with the artery of the opposite side, and with the mental branch of the inferior alveolar artery. NMDCO_relaxed.owl UBERON:0004573 biolink:NamedThing systemic artery An artery of the systemic circulation, which is the part of the cardiovascular system which carries oxygenated blood away from the heart, to the body, and returns deoxygenated blood back to the heart. NMDCO_relaxed.owl UBERON:0004688 biolink:NamedThing costo-cervical trunk The costocervical trunk arises from the upper and back part of the subclavian artery, behind the scalenus anterior on the right side, and medial to that muscle on the left side. Passing backward, it splits into the deep cervical artery and the supreme intercostal artery (or the Highest intercostal artery), which descends behind the pleura in front of the necks of the first and second ribs, and anastomoses with the first aortic intercostal (3rd posterior intercostal artery). As it crosses the neck of the first rib it lies medial to the anterior division of the first thoracic nerve, and lateral to the first thoracic ganglion of the sympathetic trunk. In the first intercostal space, it gives off a branch which is distributed in a manner similar to the distribution of the aortic intercostals. The branch for the second intercostal space usually joins with one from the highest aortic intercostal artery. This branch is not constant, but is more commonly found on the right side; when absent, its place is supplied by an intercostal branch from the aorta. Each intercostal gives off a posterior branch which goes to the posterior vertebral muscles, and sends a small spinal branch through the corresponding intervertebral foramen to the medulla spinalis and its membranes. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0006002 biolink:NamedThing vitelline artery The paired arteries that carry blood to the yolk sac from the dorsal aorta. NMDCO_relaxed.owl UBERON:0006347 biolink:NamedThing communicating artery An artery that connects two larger arteries. NMDCO_relaxed.owl UBERON:0009657 biolink:NamedThing artery of lip NMDCO_relaxed.owl UBERON:0010399 biolink:NamedThing spleen trabecular artery One of the branches of the splenic artery[MP]. NMDCO_relaxed.owl UBERON:0012254 biolink:NamedThing abdominal aorta artery An artery that originates from the abdominal aorta. NMDCO_relaxed.owl UBERON:0035398 biolink:NamedThing branch of external carotid artery NMDCO_relaxed.owl UBERON:0035539 biolink:NamedThing esophageal artery Any of several arteries that arise from the aorta and supply blood to the esophagus. NMDCO_relaxed.owl UBERON:0035548 biolink:NamedThing colic artery NMDCO_relaxed.owl UBERON:0039261 biolink:NamedThing pancreatic artery NMDCO_relaxed.owl UBERON:0001200 biolink:NamedThing submucosa of stomach The fibrous connective tissue layer beneath the stomach mucosa. NMDCO_relaxed.owl UBERON:0001205 biolink:NamedThing submucosa of small intestine Submucosal tissue in the small intestines. NMDCO_relaxed.owl UBERON:0001208 biolink:NamedThing submucosa of large intestine A submucosa that is part of a large intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001972 biolink:NamedThing submucosa of esophagus A submucosa that is part of a esophagus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003330 biolink:NamedThing submucosa of rectum The submucous layer of the wall of the rectum. NMDCO_relaxed.owl UBERON:0003331 biolink:NamedThing submucosa of colon A submucosa that is part of a colon [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003332 biolink:NamedThing submucosa of duodenum A submucosa that is part of a duodenum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004777 biolink:NamedThing respiratory system submucosa A submucosa that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004924 biolink:NamedThing submucosa of pharynx The tissue underlying the tunica mucosa of the pharynx. NMDCO_relaxed.owl UBERON:0004926 biolink:NamedThing submucosa of cystic duct A submucosa that is part of a cystic duct [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004927 biolink:NamedThing submucosa of cecum A submucosa that is part of a cecum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004929 biolink:NamedThing submucosa of ascending colon A submucosa that is part of an ascending colon [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004930 biolink:NamedThing submucosa of transverse colon A submucosa that is part of a transverse colon [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004931 biolink:NamedThing submucosa of descending colon A submucosa that is part of a descending colon [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004932 biolink:NamedThing submucosa of sigmoid colon A submucosa that is part of a sigmoid colon [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004934 biolink:NamedThing submucosa of body of stomach A submucosa that is part of a body of stomach [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004936 biolink:NamedThing submucosa of pyloric antrum A submucosa that is part of a pyloric antrum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004937 biolink:NamedThing submucosa of pylorus A submucosa that is part of a pylorus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004939 biolink:NamedThing submucosa of common bile duct A submucosa that is part of a common bile duct [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004940 biolink:NamedThing submucosa of common hepatic duct A submucosa that is part of a common hepatic duct [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004941 biolink:NamedThing submucosa of right hepatic duct A submucosa that is part of a right hepatic duct [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004942 biolink:NamedThing submucosa of left hepatic duct A submucosa that is part of a left hepatic duct [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0009566 biolink:NamedThing intestinal submucosa A submucosa that is part of a intestine. NMDCO_relaxed.owl UBERON:0012482 biolink:NamedThing submucosa of cloaca A submucosa that is part of a cloaca [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0018257 biolink:NamedThing submucosa of digestive tract Any portion of submucosa that lines the digestive tract. NMDCO_relaxed.owl UBERON:0001202 biolink:NamedThing pyloric sphincter A strong ring of smooth muscle at the end of the pyloric canal which lets food pass from the stomach to the duodenum. It receives sympathetic innervation from the celiac ganglion[WP]. NMDCO_relaxed.owl UBERON:0004916 biolink:NamedThing anal sphincter A sphincter muscle that is part of a anal region. NMDCO_relaxed.owl UBERON:0007521 biolink:NamedThing smooth muscle sphincter A ring of smooth muscle cells whose contraction closes the opening of the ring. NMDCO_relaxed.owl UBERON:0007522 biolink:NamedThing striated muscle sphincter A ring of striated muscle cells whose contraction closes the opening of the ring. NMDCO_relaxed.owl UBERON:0007652 biolink:NamedThing esophageal sphincter A sphincter that is part of an esophagus. NMDCO_relaxed.owl UBERON:0013501 biolink:NamedThing cloacal sphincter A sphincter muscle that is part of a cloaca. NMDCO_relaxed.owl UBERON:0004790 biolink:NamedThing skin mucous gland A mucous gland that is part of the skin. NMDCO_relaxed.owl UBERON:0008861 biolink:NamedThing pyloric gastric gland The gastric glands in the pyloric region of the stomach; the pyloric glands secrete mucin, which coats the stomach and protects it, and hormones such as gastrin and enkephalin[MP]. NMDCO_relaxed.owl UBERON:0011148 biolink:NamedThing submucosal gland Gland of the lamina epithelialis mucosae which perforate the lamina muscularis, with their adenomeres located in the submucosal connective tissue. NMDCO_relaxed.owl UBERON:0001218 biolink:NamedThing middle colic vein The middle colic vein drains the transverse colon. It is a tributary of the superior mesenteric vein, and follows the path of its corresponding artery, the middle colic artery. [WP,unvetted]. NMDCO_relaxed.owl UBERON:8410017 biolink:NamedThing left colic vein A portal vein that drains the descending colon. It is a tributary of the inferior mesenteric vein, and follows the path of its corresponding artery, the left colic artery. NMDCO_relaxed.owl UBERON:8410018 biolink:NamedThing right colic vein A portal vein that drains the ascending colon. It is a tributary of the superior mesenteric vein, and travels with its corresponding artery, the right colic artery. NMDCO_relaxed.owl UBERON:0002063 biolink:NamedThing sinus venosus The sinus venosus is a large cardiac chamber at the inflow tract that receives venous blood from systemic circulation. precedes the atrium on the venous side of the chordate heart. NMDCO_relaxed.owl UBERON:0001246 biolink:NamedThing interlobular bile duct The canals that carry bile in the liver between the intralobular ducts and the biliary ductules; interlobular bile ducts are part of the interlobular portal triad. NMDCO_relaxed.owl N42028777ac884221aac1bf719eb0cddf biolink:NamedThing NMDCO_relaxed.owl UBERON:0001714 biolink:NamedThing cranial ganglion The groups of nerve cell bodies associated with the twelve cranial nerves. NMDCO_relaxed.owl N063268f615b347a2b6ad06898cf7a9d1 biolink:NamedThing NMDCO_relaxed.owl N1e5dc6bd48bd48ff908797c45d9d9e91 biolink:NamedThing NMDCO_relaxed.owl UBERON:0006238 biolink:NamedThing future brain The embryonic precursor of the brain. NMDCO_relaxed.owl UBERON:0006595 biolink:NamedThing presumptive endoderm Presumptive structure of the blastula that will develop into endoderm. NMDCO_relaxed.owl N7ac177b19961444a9a438818763fc9f6 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002167 biolink:NamedThing right lung Lung which consists of the right upper lobe, middle lobe and right lower lobe.[FMA]. NMDCO_relaxed.owl Nea979d4cef37461c9f7550a35c389adc biolink:NamedThing NMDCO_relaxed.owl UBERON:0002148 biolink:NamedThing locus ceruleus The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic[GO]. Bluish region in the superior angle of the fourth ventricle floor, corresponding to melanin-like pigmented nerve cells which lie lateral to the ponto-mesencephalic central gray (griseum centrale). It is also known as nucleus pigmentosus pontis[GAID]. NMDCO_relaxed.owl UBERON:0007844 biolink:NamedThing cartilage element Skeletal element that is composed of cartilage tissue and may be permanent or transient. NMDCO_relaxed.owl UBERON:0003902 biolink:NamedThing retinal neural layer The part of the retina that contains neurons and photoreceptor cells[GO]. NMDCO_relaxed.owl N470c462d4186469e93dcfcda74311d45 biolink:NamedThing NMDCO_relaxed.owl Ne5c724315d324a6f83f522c55078f149 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001895 biolink:NamedThing metencephalon Rostral segment of the hindbrain that has as its parts the pons (where present) and the cerebellum[WP,modified]. NMDCO_relaxed.owl N27026b141f2d4e7e8ca8058136ff9c8f biolink:NamedThing NMDCO_relaxed.owl UBERON:0001456 biolink:NamedThing face A subdivision of the head that has as parts the layers deep to the surface of the anterior surface, including the mouth, eyes, and nose (when present). In vertebrates, this includes the facial skeleton and structures superficial to the facial skeleton (cheeks, mouth, eyeballs, skin of face, etc). NMDCO_relaxed.owl UBERON:0002513 biolink:NamedThing endochondral bone Replacement bone that forms within cartilage. NMDCO_relaxed.owl N2c30887959d0431e9c97bfa4a885c115 biolink:NamedThing NMDCO_relaxed.owl UBERON:0035820 biolink:NamedThing peritoneal sac A serous sac that is the aggregate of the peritoneum and the peritoneal cavity, located in the abdominal cavity. NMDCO_relaxed.owl Ncab2c18dc14a49119cb44f103e80b136 biolink:NamedThing NMDCO_relaxed.owl Na66f9d3c8d1c46f5a169569b7a8027b8 biolink:NamedThing NMDCO_relaxed.owl N2e660531ef75485594c7bf8f5a4e2ba8 biolink:NamedThing NMDCO_relaxed.owl Nf90736e29f874dbbaf9152fc0b812d81 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001892 biolink:NamedThing rhombomere A segment of the developing hindbrain[ZFA]. In the vertebrate embryo, a rhombomere is a transiently divided segment of the developing neural tube, within the hindbrain region (a neuromere) in the area that will eventually become the rhombencephalon. The rhombomeres appear as a series of slightly constricted swellings in the neural tube, caudal to the cephalic flexure.[WP]. NMDCO_relaxed.owl UBERON:0011825 biolink:NamedThing loose connective tissue Irregular connective tissue, the intercellular matrix of which contains a sparse irregular network of collagen and elastic fiber bundles. Examples: areolar tissue, neuroglial tissue, mucoid tissue. NMDCO_relaxed.owl N97dc909b500c42608c70d6380912cdbf biolink:NamedThing NMDCO_relaxed.owl UBERON:0005597 biolink:NamedThing lung primordium A pair of lateral diverticula just over the liver rudiment representing the primordia of the lungs, formed by the floor of the foregut just anterior to the liver diverticulum. NMDCO_relaxed.owl Nca6d8b6a16cc42998997a6eb2fb66b48 biolink:NamedThing NMDCO_relaxed.owl N47d4496f9b7a42b4b2039d97002967f8 biolink:NamedThing NMDCO_relaxed.owl UBERON:0006966 biolink:NamedThing coronary capillary A capillary that is part of the coronary system. NMDCO_relaxed.owl N0482d36d93e9488995c2f271e2c6309f biolink:NamedThing NMDCO_relaxed.owl UBERON:0008814 biolink:NamedThing pharyngeal arch system A transient embryonic complex that comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming, which may include (depending on species) the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear[GO,modified]. NMDCO_relaxed.owl UBERON:0007026 biolink:NamedThing presumptive gut NMDCO_relaxed.owl UBERON:0010084 biolink:NamedThing future diaphragm A structure that will develop into a diaphragm. NMDCO_relaxed.owl UBERON:0003869 biolink:NamedThing presumptive ganglion A presumptive structure that has the potential to develop into a ganglion. NMDCO_relaxed.owl UBERON:0001516 biolink:NamedThing abdominal aorta Abdominal part of aorta: the distal part of the descending aorta, which is the continuation of the thoracic part and gives rise to the inferior phrenic, lumbar, median sacral, superior and inferior mesenteric, middle suprarenal, renal, and testicular or ovarian arteries, and celiac trunk[BTO]. The abdominal aorta is the largest artery in the abdominal cavity. As part of the aorta, it is a direct continuation of descending aorta(of the thorax). [WP,unvetted]. NMDCO_relaxed.owl N261201d044e34b30a0db7d18ca779f94 biolink:NamedThing NMDCO_relaxed.owl Na83bf845364d4724808cb4ad5b3823fb biolink:NamedThing NMDCO_relaxed.owl Na32b529507ec4dba9de9681bdd5249cd biolink:NamedThing NMDCO_relaxed.owl Nc1376fd6ef7640118131d5cf6105b037 biolink:NamedThing NMDCO_relaxed.owl UBERON:0014477 biolink:NamedThing thoracic skeleton Subdivision of skeletal system that consists of all skeletal elements in the thoracic region of the trunk. In most vertebrates this is the rib cage and sternum. NMDCO_relaxed.owl Nc9fc65bd84d94d4aac347dc7e90e19d0 biolink:NamedThing NMDCO_relaxed.owl N31d442f718b24d4b83bc2c70599bd770 biolink:NamedThing NMDCO_relaxed.owl Ndad1faa7e31a42abb3796401508bd33d biolink:NamedThing NMDCO_relaxed.owl N466cdd137bde490e95589d7f3dada102 biolink:NamedThing NMDCO_relaxed.owl UBERON:0003382 biolink:NamedThing cardiac muscle of left ventricle A portion of cardiac muscle tissue that is part of a left ventricle [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0008947 biolink:NamedThing respiratory primordium NMDCO_relaxed.owl UBERON:0003498 biolink:NamedThing heart blood vessel A blood vessel that is part of a heart [Automatically generated definition]. NMDCO_relaxed.owl N5f00777698674a7a8d1291058bfb51ae biolink:NamedThing NMDCO_relaxed.owl N6c8e7406c8d74d43a3567fb06398c080 biolink:NamedThing NMDCO_relaxed.owl UBERON:0006596 biolink:NamedThing presumptive blood NMDCO_relaxed.owl UBERON:0002079 biolink:NamedThing left cardiac atrium A cardiac atrium that is in the left side of the heart. It receives oxygenated blood from the pulmonary veins, In mammals this is pumped into the left ventricle, via the Mitral valve. NMDCO_relaxed.owl N0abc419d4eed4847ba0ac1a58d1a0676 biolink:NamedThing NMDCO_relaxed.owl UBERON:0014892 biolink:NamedThing skeletal muscle organ, vertebrate A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles). NMDCO_relaxed.owl Nba69e36557574a17acd7b40e671731be biolink:NamedThing NMDCO_relaxed.owl N5bfe1c194c184ca0a54fbfebcd62cb7f biolink:NamedThing NMDCO_relaxed.owl UBERON:0005604 biolink:NamedThing extrahepatic part of hepatic duct NMDCO_relaxed.owl N640103e328ce4030a84767321f726a9d biolink:NamedThing NMDCO_relaxed.owl UBERON:0004133 biolink:NamedThing salivatory nucleus Missing definition for term UBERON:0004133. Please replace it using linked reference. NMDCO_relaxed.owl UBERON:0010913 biolink:NamedThing vertebral element Skeletal element that forms around the notochord and is part of the vertebral column. NMDCO_relaxed.owl UBERON:0001496 biolink:NamedThing ascending aorta The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta[GO]. A portion of the aorta commencing at the upper part of the base of the left ventricle, on a level with the lower border of the third costal cartilage behind the left half of the sternum; it passes obliquely upward, forward, and to the right, in the direction of the heart's axis, as high as the upper border of the second right costal cartilage, describing a slight curve in its course, and being situated, about 6 cm behind the posterior surface of the sternum. The total length is about 5 cm in length [Wikipedia]. NMDCO_relaxed.owl N19b06444239a43ffadb63d8ad01ef190 biolink:NamedThing NMDCO_relaxed.owl UBERON:0018649 biolink:NamedThing cardiac muscle tissue of ventricle NMDCO_relaxed.owl UBERON:0004126 biolink:NamedThing trabecular layer of ventricle A myocardium trabecular layer that is part of a cardiac ventricle. NMDCO_relaxed.owl UBERON:0005064 biolink:NamedThing left ventricular trabecular myocardium Missing definition for term UBERON:0005064. Please replace it using linked reference. NMDCO_relaxed.owl N40e9602ef1f94130aa8a74bd9ac8651f biolink:NamedThing NMDCO_relaxed.owl N50d898d8f0284ea391d764a53dfaeb67 biolink:NamedThing NMDCO_relaxed.owl UBERON:0005564 biolink:NamedThing gonad primordium Portion of tissue that gives rise to the immature gonad. NMDCO_relaxed.owl UBERON:0016880 biolink:NamedThing future nervous system Primordium that develops into the nervous system. NMDCO_relaxed.owl Nf23dd69b1c904d4fa2fe3680ed9eb462 biolink:NamedThing NMDCO_relaxed.owl N6d976b820e37435482ac1e19396a2e67 biolink:NamedThing NMDCO_relaxed.owl Ne2ebf16c71f94a1fabe198ef218c3d9d biolink:NamedThing NMDCO_relaxed.owl N40a20410ad64410aa69591745e953a45 biolink:NamedThing NMDCO_relaxed.owl Ned05411c870043e09c6618ce90cf9222 biolink:NamedThing NMDCO_relaxed.owl Na9d302a9ad6f409cb00f1734a9e2b802 biolink:NamedThing NMDCO_relaxed.owl UBERON:0001645 biolink:NamedThing trigeminal nerve Cranial nerve that has three branches - the ophthalmic (supplying the skin of the nose and upper jaw), the maxillary and the mandibular (supplying the lower jaw). NMDCO_relaxed.owl UBERON:0001640 biolink:NamedThing celiac artery The first major branch of the abdominal aorta. NMDCO_relaxed.owl N8cac43cf118747689af1e9b0dcd3ad8b biolink:NamedThing NMDCO_relaxed.owl N6470736bd5f9403fb9f836bc11b7bd8b biolink:NamedThing NMDCO_relaxed.owl Ndfe736fdc6394f13b4b1daeda2254e5e biolink:NamedThing NMDCO_relaxed.owl UBERON:0002168 biolink:NamedThing left lung Lung which consists of the left upper lobe and left lower lobe.[FMA]. NMDCO_relaxed.owl UBERON:0004142 biolink:NamedThing outflow tract septum The outflow tract septum is a partition in the outflow tract. NMDCO_relaxed.owl UBERON:0034874 biolink:NamedThing air in respiratory system Any portion of gas located in a part of the respiratory system that is composed primarily of air. NMDCO_relaxed.owl N69bf51119e2e4d959ae9a92a50e62950 biolink:NamedThing NMDCO_relaxed.owl Nf5c8a3df6fae4dbea5e56163b541232e biolink:NamedThing NMDCO_relaxed.owl UBERON:0006601 biolink:NamedThing presumptive ectoderm Presumptive structure of the blastula that will develop into ectoderm. NMDCO_relaxed.owl N73ea65583a0744dea3eccba496666555 biolink:NamedThing NMDCO_relaxed.owl UBERON:0006072 biolink:NamedThing cervical region of vertebral column That portion of the spine comprising the cervical vertebrae. The neck area of the spine. NMDCO_relaxed.owl UBERON:0001530 biolink:NamedThing common carotid artery plus branches A bilaterally paired branched artery that originates from the aortic arches and divides into and includes as parts the internal and external carotid arteries[cjm]. NMDCO_relaxed.owl N28fd1c5f4ebe42afbee3ad030600ae19 biolink:NamedThing NMDCO_relaxed.owl UBERON:0003923 biolink:NamedThing dorsal pancreatic bud Pancreatic bud that gives rise to the accessory pancreatic duct. NMDCO_relaxed.owl UBERON:0005316 biolink:NamedThing endocardial endothelium The endothelial lining of the endocardium. NMDCO_relaxed.owl UBERON:0004490 biolink:NamedThing cardiac muscle tissue of atrium A portion of cardiac muscle tissue that is part of an atrium [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001703 biolink:NamedThing neurocranium Subdivision of skeletal system that surrounds and protects the brain. Includes the skull base, sensory capsules and the central part of the skull roof. NMDCO_relaxed.owl N3ecfd83e7041413c9af44fe03881fa3b biolink:NamedThing NMDCO_relaxed.owl UBERON:0007842 biolink:NamedThing membrane bone Bone element that arises as a result of intramembranous ossification. NMDCO_relaxed.owl UBERON:0001514 biolink:NamedThing descending aorta The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries[GO]. The descending aorta is part of the aorta, the largest artery in the body. The descending aorta is the part of the aorta beginning at the aortic arch that runs down through the chest and abdomen. The descending aorta is divided into two portions, the thoracic and abdominal, in correspondence with the two great cavities of the trunk in which it is situated. Within the abdomen, the descending aorta branches into the two common iliac arteries which serve the legs. [WP,unvetted]. NMDCO_relaxed.owl N4fc0ef8b4279411a99a19179fa8d00b0 biolink:NamedThing NMDCO_relaxed.owl UBERON:0003073 biolink:NamedThing lens placode A thickened portion of ectoderm which serves as the precursor to the lens. SOX2 and Pou2f1 are involved in its development[WP]. NMDCO_relaxed.owl N3ccc92576b0f45bc927b7c994ab5e3b9 biolink:NamedThing NMDCO_relaxed.owl N50e3adde667e4da48419a00469be93be biolink:NamedThing NMDCO_relaxed.owl Nb8af18666fe34272a8b1ccfe18195874 biolink:NamedThing NMDCO_relaxed.owl UBERON:0004161 biolink:NamedThing septum transversum A thick plate of mesodermal tissue that occupies the space between the thoracic cavity and yolk stalk in the early embryo, forming a transverse partition partially separating the coelomic cavity into thoracic and abdominal portions. It gives rise to the central tendon of the diaphragm[VHOG]. NMDCO_relaxed.owl Nf8d2f00978de4bfda1d43f6bcad93616 biolink:NamedThing NMDCO_relaxed.owl N3083c028052f497e9708c3cc2c16674f biolink:NamedThing NMDCO_relaxed.owl Nc87b5c8f54f7449d9bf1295777e5f59b biolink:NamedThing NMDCO_relaxed.owl N3f5315507d29494ca531c61750bb8a3c biolink:NamedThing NMDCO_relaxed.owl N3d4aeb8eb24548dcac95280166f4ab5f biolink:NamedThing NMDCO_relaxed.owl UBERON:0003924 biolink:NamedThing ventral pancreatic bud Pancreatic bud that gives rise to the major pancreatic duct. NMDCO_relaxed.owl Nf6cf60feeedd4cbbb2eb6eaf374ef156 biolink:NamedThing NMDCO_relaxed.owl N917d5c1854da46e68eff8533df5326c7 biolink:NamedThing NMDCO_relaxed.owl N7810b64a6a394e13a6e4ac4630ed0003 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002149 biolink:NamedThing superior salivatory nucleus Nucleus containing parasympathetic neurons giving rise to the parasympathetic division of the facial nerve, innervating the salivary glands (Brodal, Neurological Anatomy, 3rd ed., 1981, pg 703). NMDCO_relaxed.owl UBERON:0002078 biolink:NamedThing right cardiac atrium A cardiac atrium that is in the right side of the heart. It receives deoxygenated blood. In mammals, this comes from the superior and inferior vena cava and the coronary sinus, and pumps it into the right ventricle through the tricuspid valve. NMDCO_relaxed.owl UBERON:0004160 biolink:NamedThing proepicardium An embryonic group of progenitor cells that forms from an outpouching of the septum transversum near the venous pole of the heart and gives rise to the epicardium. NMDCO_relaxed.owl Nf552bb7d34474a498dd0c6713cc663e9 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002354 biolink:NamedThing cardiac Purkinje fiber The cardiac Purkinje fiber is part of the cardiac conduction system that receives signals from the bundle of His and innervates the ventricular cardiac muscle. NMDCO_relaxed.owl Nc124fe185b1b467aaa596e64bf02a97c biolink:NamedThing NMDCO_relaxed.owl UBERON:0005726 biolink:NamedThing chemosensory system NMDCO_relaxed.owl UBERON:0002104 biolink:NamedThing visual system The sensory system subserving the sense of vision. NMDCO_relaxed.owl UBERON:0006984 biolink:NamedThing anatomical surface A two dimensional anatomical structure that is the boundary between an anatomical structure and an anatomical substance, an anatomical space or the organism's environment. Examples include the surface of your skin, the surface of the lining of your gut; the surface of the endothelium of you aorta that is in contact with blood.n. NMDCO_relaxed.owl Nb4c16c65b7994ecab6d0c3d47e744a13 biolink:NamedThing NMDCO_relaxed.owl N2e45086c6e5243c38bd81339bc63b7df biolink:NamedThing NMDCO_relaxed.owl UBERON:0006924 biolink:NamedThing stomach glandular epithelium A glandular epithelium that lines the stomach. The stomach's glandular epithelium is characterized by the presence of gastric glands. NMDCO_relaxed.owl N79b419aa76a94893b3ab24a84fe043af biolink:NamedThing NMDCO_relaxed.owl UBERON:0006603 biolink:NamedThing presumptive mesoderm Presumptive structure of the blastula that will develop into mesoderm. NMDCO_relaxed.owl Nfe924535c1e74e4e99f04bedc509d4db biolink:NamedThing NMDCO_relaxed.owl Ndcbab50be1d84884b1ac52de671d0368 biolink:NamedThing NMDCO_relaxed.owl N94e8f89693e44721b7aae12c0ec29adb biolink:NamedThing NMDCO_relaxed.owl Nfdcaea996c6d49e8b53adda420751972 biolink:NamedThing NMDCO_relaxed.owl UBERON:0003089 biolink:NamedThing sclerotome Ventral somitic compartment that is a precursor of the axial skeleton[XAO]. Sclerotomes eventually differentiate into the vertebrae and most of the skull. The caudal (posterior) half of one sclerotome fuses with the rostral (anterior) half of the adjacent one to form each vertebra. From their initial location within the somite, the sclerotome cells migrate medially towards the notochord. These cells meet the sclerotome cells from the other side to form the vertebral body. From this vertebral body, sclerotome cells move dorsally and surround the developing spinal cord, forming the vertebral arch[WP]. NMDCO_relaxed.owl N0461d402c5024468a9402bc5599c4ca0 biolink:NamedThing NMDCO_relaxed.owl Ne4bbccf00fca4859ad33793730c5ab54 biolink:NamedThing NMDCO_relaxed.owl UBERON:0012425 biolink:NamedThing striated border microvillus layer A microvillus layer that is striated and found in the intestine. NMDCO_relaxed.owl UBERON:0005171 biolink:NamedThing hepatic duct Any portion of the ducts that carry bile from the liver to the common bile duct. This may include both intrahapetic components (parts of left and right hepatic ducts) and extrahapetic components (common hepatic duct, plus hilar portion). NMDCO_relaxed.owl N12dbf9e371d84fefab0dc94a5d861872 biolink:NamedThing NMDCO_relaxed.owl N7eba89547d484a60945a370572b65c7e biolink:NamedThing NMDCO_relaxed.owl UBERON:0003855 biolink:NamedThing gonad mesenchyme Mesenchyme that is part of a developing gonad [Automatically generated definition]. NMDCO_relaxed.owl N81b45eef05b6404eb7fcb5b2a2b81c26 biolink:NamedThing NMDCO_relaxed.owl UBERON:0002726 biolink:NamedThing cervical spinal cord A spinal cord segment that adjacent_to a cervical region. NMDCO_relaxed.owl N6d7312d38c8446f5a58ebb20f58ff774 biolink:NamedThing NMDCO_relaxed.owl N61d2fcf266a64cc29431d00e8c6f7d34 biolink:NamedThing NMDCO_relaxed.owl UBERON:0011233 biolink:NamedThing synovial membrane of synovial tendon sheath Synovial sac which surrounds parts of one or more tendons. Examples: synovial tendon sheath of manual digit 2, radial bursa. NMDCO_relaxed.owl Nd9732ae15a77447e82034c9d28942943 biolink:NamedThing NMDCO_relaxed.owl UBERON:0012075 biolink:NamedThing replacement bone Bone that forms as a replacement of another structural tissue. NMDCO_relaxed.owl Neb99426f5e9d4ab3a5b3467de8d602c1 biolink:NamedThing NMDCO_relaxed.owl N54c587046c284fab94c33007cbd04448 biolink:NamedThing NMDCO_relaxed.owl N7beb73a1e5034f6686fbcb9d7d246d57 biolink:NamedThing NMDCO_relaxed.owl Ndc2342a87c2e4b098e01a05e68e06c23 biolink:NamedThing NMDCO_relaxed.owl Nc299e9385c7d40fb8cce7610b285d0df biolink:NamedThing NMDCO_relaxed.owl UBERON:0003082 biolink:NamedThing myotome A transitional population of migrating mesenchymal cells that derive from somites and that will become muscle cells. NMDCO_relaxed.owl Nb765f3a80ea648c9b27995481d817f75 biolink:NamedThing NMDCO_relaxed.owl N036bf140b5294a048a70299d8302c2bb biolink:NamedThing NMDCO_relaxed.owl UBERON:0005066 biolink:NamedThing right ventricular trabecular myocardium Missing definition for term UBERON:0005066. Please replace it using linked reference. NMDCO_relaxed.owl UBERON:0001282 biolink:NamedThing intralobular bile duct The tubules located between the bile canaliculi and interlobular bile ducts near the outer edge of a classic liver lobule. NMDCO_relaxed.owl Nee77d8997f7e47e9b395568d02efcd84 biolink:NamedThing NMDCO_relaxed.owl N6a26dce86ebc4fc78da195d4d7cf2126 biolink:NamedThing NMDCO_relaxed.owl Nc98395e1f0e343f0942132dd10f25c85 biolink:NamedThing NMDCO_relaxed.owl N7d072b41665d4940a4ad5ace10da95a4 biolink:NamedThing NMDCO_relaxed.owl UBERON:0003381 biolink:NamedThing cardiac muscle of right ventricle A portion of cardiac muscle tissue that is part of a right ventricle [Automatically generated definition]. NMDCO_relaxed.owl Nfb7eef9f49004315b93591fa5b361427 biolink:NamedThing NMDCO_relaxed.owl Nf757f0baaf4c471bab3fcc3c230535da biolink:NamedThing NMDCO_relaxed.owl UBERON:0004016 biolink:NamedThing dermatome A transitional population of migrating mesenchymal cells that derive from somites and that will become dermal cells. NMDCO_relaxed.owl N46d2c71ea88b404ba66fe7862f564b43 biolink:NamedThing NMDCO_relaxed.owl Nb8ef381b33b34ec28525a12d2f2a0be6 biolink:NamedThing NMDCO_relaxed.owl N9328bef547f0474b85d445fcf598f92b biolink:NamedThing NMDCO_relaxed.owl UBERON:0002350 biolink:NamedThing conducting system of heart The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat[GO]. NMDCO_relaxed.owl N4a16e9e9bf2b44de92afe334df7dfa44 biolink:NamedThing NMDCO_relaxed.owl UBERON:0003704 biolink:NamedThing intrahepatic bile duct Passages within the liver for the conveyance of bile. Includes right and left hepatic ducts even though these may join outside the liver to form the common hepatic duct. NMDCO_relaxed.owl Nb6c88ea0e1fe4718a99c1eef5fee4444 biolink:NamedThing NMDCO_relaxed.owl Na9c789a0922b4162b9facf9c97ae70e3 biolink:NamedThing NMDCO_relaxed.owl UBERON:0003113 biolink:NamedThing dermatocranium Subdivision of skeleton that includes all dermal bones in the cranial skeleton[ZFA,modified]. NMDCO_relaxed.owl N7e2eabd0fb6a4201ae931c711498ac44 biolink:NamedThing NMDCO_relaxed.owl UBERON:0007812 biolink:NamedThing post-anal tail A tail that extends from the posterior tip of the organism to the anus, contains muscle and skeleton. NMDCO_relaxed.owl UBERON:0005805 biolink:NamedThing dorsal aorta The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once. NMDCO_relaxed.owl UBERON:0002481 biolink:NamedThing bone tissue Skeletal tissue with a collagen-rich extracellular matrix vascularized, mineralized with hydroxyapatite and typically including osteocytes located in lacunae that communicate with one another by cell processes (in canaliculi). Bone is deposited by osteoblasts. NMDCO_relaxed.owl UBERON:0004348 biolink:NamedThing optic eminence The embryonic structure that gives rise to the corneal ectoderm. NMDCO_relaxed.owl Nfba0a86eed18429a8e52d0291f1c95e9 biolink:NamedThing NMDCO_relaxed.owl N2469a7eb271943da9f717035a51954c5 biolink:NamedThing NMDCO_relaxed.owl UBERON:0017672 biolink:NamedThing abdominal viscera A viscus that is part of a abdomen. NMDCO_relaxed.owl UBERON:0005945 biolink:NamedThing neurocranial trabecula NMDCO_relaxed.owl UBERON:0006929 biolink:NamedThing glandular columnar epithelium Simple columnar epithelium that constitutes the secretory part of a gland. Examples: epithelium of stomach, luminal epithelium of lactiferous duct.[FMA]. NMDCO_relaxed.owl UBERON:0007592 biolink:NamedThing ciliated columnar epithelium Simple columnar epithelium in which the luminal side of the cells bears cilia. Examples: epithelium of trachea, epithelium of uterine tube.[FMA]. NMDCO_relaxed.owl UBERON:0010498 biolink:NamedThing pseudostratified columnar epithelium A simple columnar epithelium that looks stratified but is not, because its cells are arranged with their nuclei at different levels. NMDCO_relaxed.owl UBERON:0003112 biolink:NamedThing olfactory region Anatomical cluster that is located in the anterior region of the cranium and provides structural support for the olfactory organ. NMDCO_relaxed.owl UBERON:0005902 biolink:NamedThing occipital region Anatomical cluster that is located in the posterior region of the cranium and forms the margin of the foramen magnum and occipital condyles. NMDCO_relaxed.owl UBERON:0011241 biolink:NamedThing ethmoid region The most anterior region of the braincase. Provides structural support for peripheral olfactory organ. NMDCO_relaxed.owl UBERON:0035639 biolink:NamedThing ocular adnexa The parts of the orbital region that are outside of the the eyeball, including the lacrimal apparatus, the extraocular muscles and the eyelids, eyelashes, eyebrows and the conjunctiva. NMDCO_relaxed.owl UBERON:0001978 biolink:NamedThing parenchyma of pancreas NMDCO_relaxed.owl UBERON:0005221 biolink:NamedThing liver right lobe parenchyma A parenchyma that is part of a right lobe of liver [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005222 biolink:NamedThing liver left lobe parenchyma A parenchyma that is part of a left lobe of liver [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0002408 biolink:NamedThing parietal serous pericardium Parietal serous membrane which is part of the pericardium and forms the outer layer of the pericardial sac. NMDCO_relaxed.owl UBERON:0001422 biolink:NamedThing facial lymphatic vessel A lymphatic vessel that is part of a face [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001473 biolink:NamedThing lymphatic vessel A vessel that contains or conveys lymph, that originates as an interfibrillar or intercellular cleft or space in a tissue or organ, and that if small has no distinct walls or walls composed only of endothelial cells and if large resembles a vein in structure[BTO]. NMDCO_relaxed.owl UBERON:0001425 biolink:NamedThing pectoral lymphatic vessel NMDCO_relaxed.owl UBERON:0003456 biolink:NamedThing respiratory system lymphatic vessel A lymphatic vessel that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004089 biolink:NamedThing midface The middle of the face including the nose and its associated bony structures[MW]. NMDCO_relaxed.owl UBERON:0010363 biolink:NamedThing endochondral element A skeletal element that has the potential to participate in endochondral ossification, and may participate in intramembranous ossification. NMDCO_relaxed.owl UBERON:0010522 biolink:NamedThing replacement element Skeletal element that forms as a replacement or substitution of another element or tissue. NMDCO_relaxed.owl UBERON:0001484 biolink:NamedThing articular capsule An articular capsule (or joint capsule) is an envelope surrounding a synovial joint. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0001515 biolink:NamedThing thoracic aorta The part of the aorta that extends from the origin at the heart to the diaphragm, and from which arises numerous branches that supply oxygenated blood to the chest cage and the organs within the chest. NMDCO_relaxed.owl UBERON:0001508 biolink:NamedThing arch of aorta The convex portion of the aorta between the ascending and descending parts of the aorta; branches from it include the brachiocephalic trunk, the left common carotid artery, and the left subclavian artery; the brachiocephalic trunk further splits to form the right subclavian artery and the right common carotid artery. NMDCO_relaxed.owl UBERON:0002040 biolink:NamedThing bronchial artery A systemic artery that supplies the lung with with oxygenated blood. NMDCO_relaxed.owl UBERON:0002057 biolink:NamedThing phrenic artery An artery that supplies the diaphragm. NMDCO_relaxed.owl UBERON:0005436 biolink:NamedThing common hepatic artery In anatomy, the common hepatic artery is a short blood vessel that supplies oxygenated blood to the liver, pylorus (a part of the stomach), duodenum (a part of the small intestine) and pancreas. It arises from the celiac artery and has the following branches:. NMDCO_relaxed.owl UBERON:0010192 biolink:NamedThing genital artery One of the laterally paired arteries that supply the gonads. NMDCO_relaxed.owl UBERON:0001586 biolink:NamedThing internal jugular vein One of two jugular veins that collect the blood from the brain, the superficial parts of the face, and the neck. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0004234 biolink:NamedThing iris smooth muscle A portion of smooth muscle tissue that is part of a iris [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001606 biolink:NamedThing muscle of iris NMDCO_relaxed.owl UBERON:0004253 biolink:NamedThing skin muscle Any muscle organ that is part of a skin of body [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0018544 biolink:NamedThing trigeminal nerve muscle Muscle innervated by the trigeminal nerve (Cranial Nerve V). NMDCO_relaxed.owl UBERON:0001608 biolink:NamedThing dilatator pupillae A smooth muscle of the eye, running radially in the iris that functions as a dilator. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0003920 biolink:NamedThing venous blood vessel A blood vessel that carries blood from the capillaries toward the heart. NMDCO_relaxed.owl UBERON:0001653 biolink:NamedThing facial vein The anterior facial vein (facial vein) commences at the side of the root of the nose, and is a direct continuation of the angular vein where it also receives a small nasal branch. It lies behind the facial artery and follows a less tortuous course. It receives blood from the external palatine vein before it either joins the anterior branch of the retromandibular vein to form the common facial vein, or drains directly into the internal jugular vein. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0003496 biolink:NamedThing head blood vessel A blood vessel that is part of a head [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001800 biolink:NamedThing sensory ganglion The clusters of neurons in the somatic peripheral nervous system which contain the cell bodies of sensory nerve axons, interneurons and non-neuronal supporting cells. NMDCO_relaxed.owl UBERON:0001677 biolink:NamedThing sphenoid bone An unpaired bone situated at the base of the skull in front of the temporal bone and basilar part of the occipital bone. The sphenoid bone is one of the seven bones that articulate to form the orbit. Its shape somewhat resembles that of a butterfly or bat with its wings extended. NMDCO_relaxed.owl UBERON:0008193 biolink:NamedThing pneumatized bone A bone that is hollow or contains many air cells, such as the mastoid process of the temporal bone[TMD]. NMDCO_relaxed.owl UBERON:0009193 biolink:NamedThing sphenoid cartilage element A sphenoid endochondral element that is composed primarily of cartilage tissue. NMDCO_relaxed.owl UBERON:0002090 biolink:NamedThing postcranial axial skeleton The postcranial subdivision of skeleton structural components forming the long axis of the vertebrate body; in Danio, consisting of the notochord, vertebrae, ribs, supraneurals, intermuscular bones, and unpaired median fins; in human consists of the bones of the vertebral column, the thoracic cage and the pelvis[ZFA+FMA]. NMDCO_relaxed.owl UBERON:0002091 biolink:NamedThing appendicular skeleton Subdivision of skeleton which which consists of all the skeletal elements in in the pectoral and pelvic appendage complexes[cjm]. NMDCO_relaxed.owl UBERON:0005944 biolink:NamedThing axial skeleton plus cranial skeleton Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified]. NMDCO_relaxed.owl UBERON:0007272 biolink:NamedThing pectoral appendage skeleton Skeletal subdivision consisting of the anterior appendicular limb skeleton, excluding the pectoral girdle. NMDCO_relaxed.owl UBERON:0007831 biolink:NamedThing pectoral girdle skeleton A subdivision of a limb or fin skeleton consisting of bones which connects the upper limb or fin to the axial skeleton on each side. It consists of the clavicle and scapula in humans and, in those species with three bones in the pectoral girdle, the coracoid. Some mammalian species (e.g. the dog and the horse) have only the scapula. In humans, the only joints between the shoulder girdle and axial skeleton are the sternoclavicular joints on each side. No joint exists between each scapula and the rib cage; instead the muscular connection between the two permits relatively great mobility of the shoulder girdle in relation to the pelvic girdle. In those species having only the scapula, no joint exists between the forelimb and the thorax, the only attachment being muscular[WP]. Examples: There are only two instances, right and left pectoral girdle skeletons. NMDCO_relaxed.owl UBERON:0010362 biolink:NamedThing endoskeleton Skeletal subdivision that undergoes indirect development and includes elements that develop as a replacement or substitution of other elements or tissues. NMDCO_relaxed.owl UBERON:0010364 biolink:NamedThing dermal skeleton Skeletal subdivision that undergoes direct development and includes elements that either develop in association with the basement membrane of the ectoderm or are homologous with such elements; includes dermatocranium, components of the appendicular skeleton, teeth and tooth-like elements of the oropharynx, and integumentary elements. NMDCO_relaxed.owl UBERON:0010719 biolink:NamedThing girdle skeleton The subdivision of the skeleton of either the pectoral or pelvic girdle. NMDCO_relaxed.owl UBERON:0012475 biolink:NamedThing skeleton of pectoral complex The collection of all skeletal elements in a pectoral complex - i.e. the combination of free limb or fin plus pectoral girdle. NMDCO_relaxed.owl UBERON:0001805 biolink:NamedThing autonomic ganglion Ganglion that has dendrites that form a junction between autonomic nerves originating from the central nervous system and autonomic nerves innervating their target organs in the periphery. There are two subtypes, sympathetic ganglion and parasympathetic ganglion. NMDCO_relaxed.owl UBERON:0003338 biolink:NamedThing ganglion of peripheral nervous system A spatially aggregated collection of nerve cell bodies in the PNS, consisting of one or more subpopulations that share cell type, chemical phenotype, and connections. (CUMBO). NMDCO_relaxed.owl UBERON:0007134 biolink:NamedThing trunk ganglion Ganglion which is located in the trunk. NMDCO_relaxed.owl UBERON:0009758 biolink:NamedThing abdominal ganglion A ganglion that is part of a abdominal segment of trunk. NMDCO_relaxed.owl UBERON:0001799 biolink:NamedThing vitreous chamber of eyeball The chamber in the eyeball enclosing the vitreous humor, bounded anteriorly by the lens and ciliary body and posteriorly by the posterior wall of the eyeball[BTO,modified]. NMDCO_relaxed.owl UBERON:0010294 biolink:NamedThing scleral endothelium An endothelium that is part of a sclera. NMDCO_relaxed.owl UBERON:0002324 biolink:NamedThing muscle of back Any muscle organ that is part of a back [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0002377 biolink:NamedThing muscle of neck Any muscle that is part of the cervical (neck) region. NMDCO_relaxed.owl UBERON:0002378 biolink:NamedThing muscle of abdomen Muscle (organ) which is a part of the abdomen. Examples: external oblique, rectus abdominis. NMDCO_relaxed.owl UBERON:0003665 biolink:NamedThing post-anal tail muscle A muscle organ that attaches to a tail vertebra [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003833 biolink:NamedThing abdominal segment muscle A muscle organ that is part of an abdominal segment of trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003897 biolink:NamedThing axial muscle One of the skeletal muscles of the head and neck, spine, and ribs. NMDCO_relaxed.owl UBERON:0004518 biolink:NamedThing muscle of vertebral column A muscle that is attached to a vertebra of the vertebral column. NMDCO_relaxed.owl UBERON:0008196 biolink:NamedThing muscle of pectoral girdle Any muscle organ that is part of a pectoral girdle region. NMDCO_relaxed.owl UBERON:0010891 biolink:NamedThing pectoral complex muscle A muscle of a pectoral girdle, pectoral fin or anterior limb. NMDCO_relaxed.owl UBERON:0010959 biolink:NamedThing craniocervical muscle Any muscle organ that is part of either the head or the neck. NMDCO_relaxed.owl UBERON:0014794 biolink:NamedThing pectoral appendage muscle Any muscle organ that is part of a pectoral appendage (forelimb or pectoral fin). NMDCO_relaxed.owl UBERON:0006960 biolink:NamedThing ovary stroma The stroma of the ovary is a peculiar soft tissue, abundantly supplied with blood vessels, consisting for the most part of spindle-shaped cells with a small amount of ordinary connective tissue. These cells have been regarded by some anatomists as unstriped muscle cells, which, indeed, they most resemble; by others as connective-tissue cells. On the surface of the organ this tissue is much condensed, and forms a layer composed of short connective-tissue fibers, with fusiform cells between them. The stroma of the ovary may contain interstitial cells resembling those of the testis. NMDCO_relaxed.owl UBERON:0010295 biolink:NamedThing substantia propria of sclera A stroma that is part of a sclera. NMDCO_relaxed.owl UBERON:0018234 biolink:NamedThing stroma of pancreas A stroma that is part of a pancreas. NMDCO_relaxed.owl UBERON:0016548 biolink:NamedThing central nervous system gray matter layer A layer of of the central nervous system that is part of gray matter. NMDCO_relaxed.owl UBERON:0006930 biolink:NamedThing glandular cuboidal epithelium NMDCO_relaxed.owl UBERON:0001833 biolink:NamedThing lip One of the two fleshy folds which surround the opening of the mouth. NMDCO_relaxed.owl UBERON:0004357 biolink:NamedThing paired limb/fin bud An outgrowth on the lateral trunk of the embryo that develops into a limb or paired fin. The limb/fin bud is divided into ectoderm and mesenchyme[cjm, modified from MP]. NMDCO_relaxed.owl UBERON:0001834 biolink:NamedThing upper lip Lip that covers the upper portion of the mouth.[TAO]. NMDCO_relaxed.owl UBERON:0001835 biolink:NamedThing lower lip Lip that covers the lower portion of the mouth.[TAO]. NMDCO_relaxed.owl UBERON:0004086 biolink:NamedThing brain ventricle One of the system of communicating cavities in the brain that are continuous with the central canal of the spinal cord, that like it are derived from the medullary canal of the embryo, that are lined with an epithelial ependyma, and that contain a serous fluid. NMDCO_relaxed.owl UBERON:0014775 biolink:NamedThing prosomere A neuromere that is part of the presumptive forebrain. NMDCO_relaxed.owl UBERON:0014776 biolink:NamedThing midbrain neuromere A neuromere that is part of the presumptive midbrain. NMDCO_relaxed.owl UBERON:0014777 biolink:NamedThing spinal neuromere A neuromere that is part of the presumptive spinal cord. NMDCO_relaxed.owl UBERON:0005290 biolink:NamedThing myelencephalon The posterior part of the developing vertebrate hindbrain or the corresponding part of the adult brain composed of the medulla oblongata and a portion of the fourth ventricle; as well as the glossopharyngeal nerve (CN IX), vagus nerve (CN X), accessory nerve (CN XI), hypoglossal nerve (CN XII), and a portion of the vestibulocochlear nerve (CN VIII).[BTO,WP]. NMDCO_relaxed.owl UBERON:0001916 biolink:NamedThing endothelium of arteriole An endothelium that is part of an arteriole [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001918 biolink:NamedThing endothelium of venule An endothelium that is part of a venule [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0001919 biolink:NamedThing endothelium of vein An endothelium that is part of a vein [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004698 biolink:NamedThing vena cava endothelium An endothelium that is part of a vena cava [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004699 biolink:NamedThing outflow tract endothelium An endothelium that is part of a outflow tract [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004700 biolink:NamedThing arterial system endothelium An endothelium that is part of an arterial system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004701 biolink:NamedThing venous system endothelium An endothelium that is part of a venous system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004851 biolink:NamedThing aorta endothelium The thin layer of flat cells that line the aorta and form a barrier between circulating blood in the lumen and the rest of the vessel wall. NMDCO_relaxed.owl UBERON:0004852 biolink:NamedThing cardiovascular system endothelium An endothelium that is part of the cardiovascular system. NMDCO_relaxed.owl UBERON:0008307 biolink:NamedThing heart endothelium An endothelium that is part of a heart [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0019189 biolink:NamedThing carotid artery endothelium NMDCO_relaxed.owl UBERON:0004702 biolink:NamedThing respiratory system blood vessel endothelium A blood vessel endothelium that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:2005260 biolink:NamedThing fenestrated capillary Capillary that has pores in the endothelial cells (60-80 nm in diameter) that are spanned by a diaphragm of radially oriented fibrils and allow small molecules and limited amounts of protein to diffuse. NMDCO_relaxed.owl UBERON:8410081 biolink:NamedThing blood microvessel Any of the smallest blood vessels where blood circulates within organ tissues. Microvessels include terminal arterioles, metarterioles, capillaries, and venules (but exclude lymphatic capillaries). Arterioles carry oxygenated blood to the capillaries, and blood flows out of the capillaries through venules into veins. NMDCO_relaxed.owl UBERON:0001982 biolink:NamedThing capillary Any of the smallest blood vessels connecting arterioles with venules. NMDCO_relaxed.owl UBERON:0003497 biolink:NamedThing abdomen blood vessel A blood vessel that is part of an abdomen [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003502 biolink:NamedThing neck blood vessel A blood vessel that is part of a neck [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003504 biolink:NamedThing respiratory system blood vessel A blood vessel that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003513 biolink:NamedThing trunk blood vessel A blood vessel that is part of a trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003524 biolink:NamedThing tail blood vessel A blood vessel that is part of a tail [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003834 biolink:NamedThing thoracic segment blood vessel A blood vessel that is part of a thorax [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003835 biolink:NamedThing abdominal segment blood vessel A blood vessel that is part of an abdominal segment of trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004258 biolink:NamedThing back blood vessel A blood vessel that is part of a back [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004365 biolink:NamedThing vitelline blood vessel Blood vessel that is connected to the yolk sac. NMDCO_relaxed.owl UBERON:0007300 biolink:NamedThing pectoral appendage blood vessel A blood vessel that is part of a pectoral appendage. NMDCO_relaxed.owl UBERON:0007301 biolink:NamedThing appendage blood vessel A blood vessel that is part of a limb/fin. NMDCO_relaxed.owl UBERON:0014907 biolink:NamedThing intersomitic vessel One of the primary blood vessel sprouts that originate from the dorsal aorta and posterior cardinal vein and align dorsoventrally at the myotomal boundaries between somites. NMDCO_relaxed.owl UBERON:3010200 biolink:NamedThing vasculature of respiratory integument Blood vessels in respiratory skin. NMDCO_relaxed.owl UBERON:0002047 biolink:NamedThing pontine raphe nucleus The pontine raphe nucleus is one of the raphe nuclei. It is located in the pontine tegmentum. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0007635 biolink:NamedThing nucleus of medulla oblongata A neural nucleus that is part of a medulla oblongata. NMDCO_relaxed.owl UBERON:0006612 biolink:NamedThing shell A rigid covering that envelops an object. NMDCO_relaxed.owl UBERON:0009142 biolink:NamedThing entire embryonic mesenchyme Sum total of mesenchyme in the embryo. NMDCO_relaxed.owl UBERON:0003314 biolink:NamedThing eye mesenchyme Mesenchyme that is part of a developing camera-type eye. NMDCO_relaxed.owl UBERON:0003315 biolink:NamedThing mesenchyme of ovary Mesenchyme that is part of a developing ovary [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003316 biolink:NamedThing mesenchyme of yolk sac The portion of the yolk sac that is derived from mesoderm and consists of mesenchyme. NMDCO_relaxed.owl UBERON:0003323 biolink:NamedThing mesenchyme of upper jaw Mesenchyme that is part of a developing upper jaw [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003413 biolink:NamedThing pectoral appendage bud mesenchyme Mesenchyme that is part of a pectoral appendage bud. NMDCO_relaxed.owl UBERON:0005691 biolink:NamedThing 4th arch mesenchyme Mesenchyme that is part of a pharyngeal arch 4. NMDCO_relaxed.owl UBERON:0007213 biolink:NamedThing mesenchyme derived from head neural crest Mesenchyme that develops_from a cranial neural crest. NMDCO_relaxed.owl UBERON:0007214 biolink:NamedThing mesenchyme derived from trunk neural crest Mesenchyme that develops_from a trunk neural crest. NMDCO_relaxed.owl UBERON:0007524 biolink:NamedThing dense mesenchyme tissue Mesenchyme with little extracellular matrix. NMDCO_relaxed.owl UBERON:0007530 biolink:NamedThing migrating mesenchyme population Mesenchymal cells that are migrating. NMDCO_relaxed.owl UBERON:0009204 biolink:NamedThing medial nasal process mesenchyme Mesenchyme that is part of a medial nasal prominence. NMDCO_relaxed.owl UBERON:0009482 biolink:NamedThing associated mesenchyme of foregut-midgut junction Mesenchyme that is part of a foregut-midgut junction. NMDCO_relaxed.owl UBERON:0009501 biolink:NamedThing mesenchyme of fronto-nasal process The embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the frontonasal region of the head. NMDCO_relaxed.owl UBERON:0009503 biolink:NamedThing mesenchyme of hindgut Mesenchyme that is part of a developing hindgut. NMDCO_relaxed.owl UBERON:0009584 biolink:NamedThing 1st arch mandibular mesenchyme Mesenchyme that is part of a 1st arch mandibular component. NMDCO_relaxed.owl UBERON:0009602 biolink:NamedThing left lung associated mesenchyme Mesenchyme that is part of a developing left lung. NMDCO_relaxed.owl UBERON:0009603 biolink:NamedThing right lung associated mesenchyme Mesenchyme that is part of a developing right lung. NMDCO_relaxed.owl UBERON:0009752 biolink:NamedThing pancreas mesenchyme The embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing pancreas. NMDCO_relaxed.owl UBERON:0009891 biolink:NamedThing facial mesenchyme Mesenchyme that is part of a developing face. NMDCO_relaxed.owl UBERON:0010031 biolink:NamedThing 6th arch mesenchyme Mesenchyme that is part of a pharyngeal arch 6. NMDCO_relaxed.owl UBERON:0010042 biolink:NamedThing 1st arch mesenchyme Mesenchyme that is part of a pharyngeal arch 1. NMDCO_relaxed.owl UBERON:0010045 biolink:NamedThing 1st arch maxillary mesenchyme Mesenchyme that is part of a 1st arch maxillary component. NMDCO_relaxed.owl UBERON:0010083 biolink:NamedThing future dermis Mesenchyme that has the potential to develop into a dermis. NMDCO_relaxed.owl UBERON:0010252 biolink:NamedThing 1st arch mandibular mesenchyme from neural crest Mesenchyme that develops_from a neural crest and is part of a 1st arch mandibular mesenchyme. NMDCO_relaxed.owl UBERON:0010253 biolink:NamedThing 1st arch maxillary mesenchyme from neural crest Mesenchyme that develops_from a neural crest and is part of a 1st arch maxillary mesenchyme. NMDCO_relaxed.owl UBERON:0010256 biolink:NamedThing 4th arch mesenchyme from neural crest Mesenchyme that develops_from a neural crest and is part of a 4th arch mesenchyme. NMDCO_relaxed.owl UBERON:0010257 biolink:NamedThing 6th arch mesenchyme from neural crest Mesenchyme that develops_from a neural crest and is part of a 6th arch mesenchyme. NMDCO_relaxed.owl UBERON:0010258 biolink:NamedThing mesenchyme from rhombencephalic neural crest Mesenchyme that develops_from a rhombencephalon neural crest. NMDCO_relaxed.owl UBERON:0010259 biolink:NamedThing 1st arch mesenchyme from neural crest Mesenchyme that develops_from a neural crest and is part of a 1st arch mesenchyme. NMDCO_relaxed.owl UBERON:0010299 biolink:NamedThing scleral mesenchyme Mesenchyme surrounding the developing optic cup which develops into the sclera. NMDCO_relaxed.owl UBERON:0010329 biolink:NamedThing paired limb/fin bud mesenchyme Mesenchyme that is part of a limb/fin bud. NMDCO_relaxed.owl UBERON:0010334 biolink:NamedThing maxillary process mesenchyme from neural crest Mesenchyme that develops_from a neural crest and is part of a maxillary process mesenchyme. NMDCO_relaxed.owl UBERON:0010336 biolink:NamedThing mandibular process mesenchyme from neural crest Mesenchyme that develops_from a neural crest and is part of a mandibular process mesenchyme. NMDCO_relaxed.owl UBERON:0010337 biolink:NamedThing mandibular process mesenchyme from head mesenchyme Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a mandibular process mesenchyme. NMDCO_relaxed.owl UBERON:0010338 biolink:NamedThing 1st arch maxillary mesenchyme from head mesenchyme Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch maxillary mesenchyme. NMDCO_relaxed.owl UBERON:0010339 biolink:NamedThing 1st arch mandibular mesenchyme from head mesenchyme Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mandibular mesenchyme. NMDCO_relaxed.owl UBERON:0010341 biolink:NamedThing 1st arch mesenchyme from head mesenchyme Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 1st arch mesenchyme. NMDCO_relaxed.owl UBERON:0010345 biolink:NamedThing 4th arch mesenchyme from head mesenchyme Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 4th arch mesenchyme. NMDCO_relaxed.owl UBERON:0010347 biolink:NamedThing 6th arch mesenchyme from head mesenchyme Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 6th arch mesenchyme. NMDCO_relaxed.owl UBERON:0034995 biolink:NamedThing jaw mesenchyme Mesenchyme that is part of a developing jaw [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0009618 biolink:NamedThing trunk paraxial mesoderm NMDCO_relaxed.owl UBERON:0003218 biolink:NamedThing ovary septum Septum that divides the ovary, the basal portion of a carpel or group of fused carpels, that encloses the ovule(s)[GO]. NMDCO_relaxed.owl UBERON:0003219 biolink:NamedThing shell septum Septum that divides the internal chambers (camerae) of the shell of a cephalopod, namely nautiloids or ammonoids. NMDCO_relaxed.owl UBERON:0006211 biolink:NamedThing buccopharyngeal membrane The thin bilaminar membrane derived from the prechordal plate that is devoid of mesoderm and formed by the apposition of the stomodeal ectoderm with the foregut endoderm; after the embryonic head fold has evolved it lies at the caudal limit of the stomodeum, forming a septum between the primitive mouth and pharynx; the membrane eventually disappears, and thus a communication is established between the mouth and the future pharynx. NMDCO_relaxed.owl UBERON:0002105 biolink:NamedThing vestibulo-auditory system Sensory system responsible for the perception of spatial orientation and auditory stimuli. NMDCO_relaxed.owl UBERON:0007037 biolink:NamedThing mechanosensory system NMDCO_relaxed.owl UBERON:0016490 biolink:NamedThing auditory system Is the sensory system for the sense of hearing. NMDCO_relaxed.owl UBERON:0018707 biolink:NamedThing bladder organ A membranous sac in animals that serves as the receptacle of a liquid or contains gas. NMDCO_relaxed.owl UBERON:0002111 biolink:NamedThing artery smooth muscle tissue A portion of smooth muscle tissue that is part of an artery [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0002112 biolink:NamedThing smooth muscle of esophagus A portion of smooth muscle tissue that is part of a esophagus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004220 biolink:NamedThing large intestine smooth muscle A portion of smooth muscle tissue that is part of a large intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004221 biolink:NamedThing intestine smooth muscle A portion of smooth muscle tissue that is part of a intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004222 biolink:NamedThing stomach smooth muscle A portion of smooth muscle tissue that is part of a stomach [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004225 biolink:NamedThing respiratory system smooth muscle A portion of smooth muscle tissue that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004226 biolink:NamedThing gastrointestinal system smooth muscle A portion of smooth muscle tissue that is part of a digestive system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004231 biolink:NamedThing anal region smooth muscle A portion of smooth muscle tissue that is part of an anal region [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004232 biolink:NamedThing lymphatic vessel smooth muscle A portion of smooth muscle tissue that is part of a lymphatic vessel [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004236 biolink:NamedThing arteriole smooth muscle A portion of smooth muscle tissue that is part of an arteriole [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004237 biolink:NamedThing blood vessel smooth muscle Smooth muscle found within, and composing the majority of the wall of blood vessels. NMDCO_relaxed.owl UBERON:0004238 biolink:NamedThing spleen smooth muscle A portion of smooth muscle tissue that is part of a spleen [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004239 biolink:NamedThing small intestine smooth muscle A portion of smooth muscle tissue that is part of a small intestine [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004246 biolink:NamedThing outflow tract smooth muscle A portion of smooth muscle tissue that is part of a outflow tract [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004296 biolink:NamedThing respiratory system lymphatic vessel smooth muscle A lymphatic vessel smooth muscle that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004297 biolink:NamedThing respiratory system blood vessel smooth muscle A blood vessel smooth muscle that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004695 biolink:NamedThing arterial system smooth muscle A portion of smooth muscle tissue that is part of an arterial system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004696 biolink:NamedThing venous system smooth muscle A portion of smooth muscle tissue that is part of a venous system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0012416 biolink:NamedThing respiratory system arterial smooth muscle NMDCO_relaxed.owl UBERON:0012418 biolink:NamedThing respiratory system venous smooth muscle A smooth muscle tissue that is part of a respiratory system venous blood vessel. NMDCO_relaxed.owl UBERON:0015783 biolink:NamedThing smooth muscle layer in fatty layer of subcutaneous tissue A smooth muscle tissue that is part of a hypodermis. NMDCO_relaxed.owl UBERON:0018112 biolink:NamedThing rectum smooth muscle tissue Any portion of smooth muscle tissue that is part of the rectum. NMDCO_relaxed.owl UBERON:8480002 biolink:NamedThing thoracic aorta smooth muscle tissue A portion of smooth muscle tissue that is part of the thoracic aorta. NMDCO_relaxed.owl UBERON:0002128 biolink:NamedThing superior olivary complex A collection of brainstem nuclei that functions in multiple aspects of hearing and is an important component of the ascending and descending auditory pathways of the auditory system. NMDCO_relaxed.owl UBERON:0007245 biolink:NamedThing nuclear complex of neuraxis Gray matter of the central nervous system which is a collection of clustered nuclei. NMDCO_relaxed.owl UBERON:0007641 biolink:NamedThing trigeminal nuclear complex The sensory trigeminal nerve nuclei are the largest of the cranial nerve nuclei, and extend through the whole of the midbrain, pons and medulla. There is also a distinct trigeminal motor nucleus that is medial to the chief sensory nucleus[WP]. NMDCO_relaxed.owl UBERON:0010225 biolink:NamedThing thalamic complex A nuclear complex which in mammals consists of four parts, the hypothalamus, epithalamus, ventral thalamus, and dorsal thalamus[WP,modified]. NMDCO_relaxed.owl UBERON:0019263 biolink:NamedThing gray matter of hindbrain NMDCO_relaxed.owl UBERON:0003619 biolink:NamedThing aorta tunica intima The innermost layer of the aorta, containing the endothelium and an inner elastic membrane. NMDCO_relaxed.owl UBERON:0005740 biolink:NamedThing tunica intima of artery A tunica intima that is part of a artery. NMDCO_relaxed.owl UBERON:0007242 biolink:NamedThing tunica intima of vein A tunica intima that is part of a vein. NMDCO_relaxed.owl UBERON:0003426 biolink:NamedThing dermis adipose tissue An adipose tissue that is part of a dermis [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0007808 biolink:NamedThing adipose tissue of abdominal region Adipose tissue that is located in the abdominal region. This includes any subcutaneous fat, visceral fat or encapsulated adipose tissue depots. NMDCO_relaxed.owl UBERON:0014454 biolink:NamedThing visceral abdominal adipose tissue Subcutaneous adipose tissue that is located in the peritoneal cavity. NMDCO_relaxed.owl UBERON:0014455 biolink:NamedThing subcutaneous abdominal adipose tissue Subcutaneous adipose tissue that is located in the abdominal region. NMDCO_relaxed.owl UBERON:0019143 biolink:NamedThing intramuscular adipose tissue Adipose tissue which is located throughout skeletal muscle and is responsible for the marbling seen in certain cuts of beef. In humans, excess accumulation of intramuscular fat is associated with insulin resistance and type 2 diabetes. NMDCO_relaxed.owl UBERON:0035814 biolink:NamedThing pericardial fat The sum of epicardial and paracardial fat deposits. NMDCO_relaxed.owl UBERON:0035815 biolink:NamedThing paracardial fat Fat deposits in the mediastinum outside the parietal pericardium . NMDCO_relaxed.owl UBERON:0035818 biolink:NamedThing visceral fat Any fat deposit surrounding a visceral organ. NMDCO_relaxed.owl UBERON:0011362 biolink:NamedThing cranial blood vasculature A blood vasculature that is part of a head. NMDCO_relaxed.owl UBERON:0011363 biolink:NamedThing cranial lymph vasculature A lymph vasculature that is part of a head. NMDCO_relaxed.owl UBERON:0002213 biolink:NamedThing cartilaginous joint Nonsynovial joint in which the articulating bones or cartilages are connected by cartilage. Examples: Spheno-occipital synchondrosis, first sternocostal joint, pubic symphysis.[FMA]. NMDCO_relaxed.owl UBERON:0011134 biolink:NamedThing nonsynovial joint Joint in which the articulating bones or cartilages are connected by ligaments or fibrocartilage without an intervening synovial cavity. Examples: sagittal suture, inferior tibiofibular syndesmosis, costochondral joint, pubic symphysis. NMDCO_relaxed.owl UBERON:0003694 biolink:NamedThing atlanto-axial joint The Atlanto-axial joint is of a complicated nature, comprising no fewer than four distinct joints. There is a pivot articulation between the odontoid process of the axis and the ring formed by the anterior arch and the transverse ligament of the atlas. NMDCO_relaxed.owl UBERON:0008114 biolink:NamedThing joint of girdle A skeletal joint that is part of a appendage girdle region. NMDCO_relaxed.owl UBERON:0008823 biolink:NamedThing neural tube derived brain A brain that develops_from a neural tube. NMDCO_relaxed.owl UBERON:0015007 biolink:NamedThing cervical vertebra endochondral element A vertebral endochondral element in the cervical region of the vertebral column. NMDCO_relaxed.owl UBERON:0002241 biolink:NamedThing chondrocranium Endoskeletal elements that encase the brain, nose, inner ear[cjm]. that part of the neurocranium formed by endochondral ossification and comprising the bones of the base of the skull[TFD]. NMDCO_relaxed.owl UBERON:0008895 biolink:NamedThing splanchnocranium Subdivision of endoskeleton derived from pharyngeal arches. NMDCO_relaxed.owl UBERON:0003061 biolink:NamedThing blood island Blood islands are structures in the developing embryo which lead to many different parts of the circulatory system. They primarily derive from plexuses formed from angioblasts. Within them, vacuoles appear through liquefaction of the central part of the syncytium into plasma. The lumen of the blood vessels thus formed is probably intracellular. The flattened cells at the periphery form the endothelium. The nucleated red blood corpuscles develop either from small masses of the original angioblast left attached to the inner wall of the lumen or directly from the flat endothelial cells. In either case the syncytial mass thus formed projects from and is attached to the wall of the vessel. Such a mass is known as a blood island and hemoglobin gradually accumulates within it. Later the cells on the surface round up, giving the mass a mulberry-like appearance. Then the red blood cells break loose and are carried away in the plasma. Such free blood cells continue to divide. Blood islands have been seen in the area vasculosa in the omphalomesenteric vein and arteries, and in the dorsal aorta[WP, unvetted]. NMDCO_relaxed.owl UBERON:0003921 biolink:NamedThing pancreas primordium Embryonic structure that develops into pancreatic bud. NMDCO_relaxed.owl UBERON:0005425 biolink:NamedThing presumptive neural retina Portion of tissue that is the inner layer of the optic cup and will become the neural retina. NMDCO_relaxed.owl UBERON:0005729 biolink:NamedThing pectoral appendage field A limb/fin field that has the potential to develop into a pectoral appendage bud mesenchyme. NMDCO_relaxed.owl UBERON:0006222 biolink:NamedThing future diencephalon The foremost region of the future forebrain that develops into the diencephalon. NMDCO_relaxed.owl UBERON:0006240 biolink:NamedThing future forebrain A presumptive structure that has the potential to develop into a forebrain. NMDCO_relaxed.owl UBERON:0006241 biolink:NamedThing future spinal cord NMDCO_relaxed.owl UBERON:0006242 biolink:NamedThing gallbladder primordium A sac-like cavity ventral to the liver, lying in the sub-mesodermal space and closed by a thin sheet of ectodermal cells, from which the future gall bladder develops. NMDCO_relaxed.owl UBERON:0006283 biolink:NamedThing future cardiac ventricle Multi-tissue structure that is part of the heart tube and will become the cardiac ventricle. NMDCO_relaxed.owl UBERON:0007277 biolink:NamedThing presumptive hindbrain The rhombencephalon (or hindbrain) is a developmental categorization of portions of the central nervous system in vertebrates. The rhombencephalon can be subdivided in a variable number of transversal swellings called rhombomeres. In the human embryo eight rhombomeres can be distinguished, from caudal to rostral: Rh7-Rh1 and the isthmus (the most rostral rhombomere). A rare disease of the rhombencephalon, 'rhombencephalosynapsis' is characterized by a missing vermis resulting in a fused cerebellum. Patients generally present with cerebellar ataxia. The caudal rhombencephalon has been generally considered as the initiation site for neural tube closure. NMDCO_relaxed.owl UBERON:0007278 biolink:NamedThing presumptive sinus venosus Portion of tissue that is part of the heart tube and will become the sinus venosus. NMDCO_relaxed.owl UBERON:0007280 biolink:NamedThing presumptive endocardium A presumptive structure that has the potential to develop into a endocardium. NMDCO_relaxed.owl UBERON:0007281 biolink:NamedThing presumptive midbrain hindbrain boundary Embryonic structure that gives rise to the midbrain hindbrain boundary. NMDCO_relaxed.owl UBERON:0007282 biolink:NamedThing presumptive segmental plate A presumptive structure that has the potential to develop into a presomitic mesoderm. NMDCO_relaxed.owl UBERON:0007285 biolink:NamedThing presumptive paraxial mesoderm The part of the blastula that has the potential to develop into a paraxial mesoderm. NMDCO_relaxed.owl UBERON:0009615 biolink:NamedThing midbrain hindbrain boundary neural plate NMDCO_relaxed.owl UBERON:0009616 biolink:NamedThing presumptive midbrain A presumptive structure that has the potential to develop into a midbrain. NMDCO_relaxed.owl UBERON:0010092 biolink:NamedThing future metencephalon A developing anatomical structure that has the potential to develop into a metencephalon. NMDCO_relaxed.owl UBERON:0010096 biolink:NamedThing future myelencephalon A developing anatomical structure that has the potential to develop into a myelencephalon. NMDCO_relaxed.owl UBERON:0010227 biolink:NamedThing future cardiac atrium Multi-tissue structure that is part of the heart tube and will become the cardiac atrium. NMDCO_relaxed.owl UBERON:0010375 biolink:NamedThing pancreas dorsal primordium NMDCO_relaxed.owl UBERON:0010376 biolink:NamedThing pancreas ventral primordium NMDCO_relaxed.owl UBERON:0014371 biolink:NamedThing future telencephalon Embryonic structure that gives rise to the telencephalon. NMDCO_relaxed.owl UBERON:0007414 biolink:NamedThing nucleus of midbrain tegmentum A nucleus of brain that spans a midbrain tegmentum. NMDCO_relaxed.owl UBERON:0011777 biolink:NamedThing nucleus of spinal cord A neural nucleus that is part of the spinal cord. NMDCO_relaxed.owl UBERON:0002315 biolink:NamedThing gray matter of spinal cord The ridge-shaped grey matter of the spinal cord that extends longitudunally through the center of each half of the spinal cord, and are largely or entirely composed of nerve cell bodies and their dendrites and some supportive tissue. NMDCO_relaxed.owl UBERON:0003528 biolink:NamedThing brain gray matter A gray matter that is part of a brain [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0010125 biolink:NamedThing future superior salivatory nucleus A gray matter that has the potential to develop into a superior salivatory nucleus. NMDCO_relaxed.owl UBERON:0010285 biolink:NamedThing midbrain basal plate Portion of tissue that is dorsolateral to the floor plate and part of the midbrain. NMDCO_relaxed.owl UBERON:0019264 biolink:NamedThing gray matter of forebrain NMDCO_relaxed.owl UBERON:0019267 biolink:NamedThing gray matter of midbrain NMDCO_relaxed.owl UBERON:0019269 biolink:NamedThing gray matter of diencephalon NMDCO_relaxed.owl UBERON:0002343 biolink:NamedThing abdomen musculature Set of all muscles in abdomen. NMDCO_relaxed.owl UBERON:0004461 biolink:NamedThing skeletal musculature of head Any collection of skeletal muscles that is part of a head [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004464 biolink:NamedThing musculature of thorax Any collection of muscles that is part of a thorax [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004465 biolink:NamedThing musculature of neck Any collection of muscles that is part of a neck [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004468 biolink:NamedThing set of muscles of vertebral column NMDCO_relaxed.owl UBERON:0004469 biolink:NamedThing musculature of back Any collection of muscles that is part of a back [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004471 biolink:NamedThing musculature of pectoral girdle A subdivision of the musculature of the body in the pectoral girdle region. Includes pectoral and shoulder muscles. NMDCO_relaxed.owl UBERON:0004473 biolink:NamedThing musculature of face Any collection of muscles that is part of a face. NMDCO_relaxed.owl UBERON:0004479 biolink:NamedThing musculature of trunk Any collection of muscles that is part of a trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0007269 biolink:NamedThing pectoral appendage musculature Any collection of muscles that is part of a pectoral appendage. NMDCO_relaxed.owl UBERON:0007271 biolink:NamedThing appendage musculature Any collection of muscles that is part of an appendage. NMDCO_relaxed.owl UBERON:0008229 biolink:NamedThing craniocervical region musculature Musculature system of the pharyngeal and head regions. NMDCO_relaxed.owl UBERON:0013700 biolink:NamedThing axial musculature Musculature of the head and neck, spine, and ribs. NMDCO_relaxed.owl UBERON:0014793 biolink:NamedThing musculature of pectoral complex Any collection of muscles that is part of a pectoral complex. The pectoral complex comprises the pectoral girdle and the associated limb or fin. NMDCO_relaxed.owl UBERON:0013507 biolink:NamedThing thoracic vertebra cartilage element A thoracic vertebra endochondral element that is composed primarily of cartilage tissue. NMDCO_relaxed.owl UBERON:0013508 biolink:NamedThing thoracic vertebra pre-cartilage condensation A thoracic vertebra endochondral element that is composed primarily of a pre-cartilage condensation. NMDCO_relaxed.owl UBERON:0004493 biolink:NamedThing cardiac muscle tissue of myocardium A portion of cardiac muscle tissue that is part of a myocardium [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0010131 biolink:NamedThing conducting tissue of heart Any portion of cardiac muscle tissue that is part of the conducting system of heart or the Purkinje fibers. NMDCO_relaxed.owl UBERON:8000009 biolink:NamedThing Purkinje fiber network A collection of Purkinje fibers that receives signals from the right and left bundle branches and innervates the ventricular cardiac muscle. The Purkinje fiber network creates synchronized contractions of the heart ventricles. NMDCO_relaxed.owl UBERON:0003379 biolink:NamedThing cardiac muscle of right atrium A portion of cardiac muscle tissue that is part of a right atrium [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004491 biolink:NamedThing cardiac muscle tissue of interatrial septum A portion of cardiac muscle tissue that is part of a interatrial septum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003452 biolink:NamedThing trabecula carnea cardiac muscle tissue A portion of cardiac muscle tissue that is part of a trabecula carnea [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0002396 biolink:NamedThing vomer The triangular flat bone of the nasal septum. NMDCO_relaxed.owl UBERON:0008001 biolink:NamedThing irregular bone The irregular bones are bones which, from their peculiar form, cannot be grouped as long bone, short bone, flat bone or sesamoid bone. Irregular bones serve various purposes in the body, such as protection of nervous tissue, affording multiple anchor points for skeletal muscle attachment (as with the sacrum), and maintaining pharynx and trachea support, and tongue attachment (such as the hyoid bone). They consist of cancellous tissue enclosed within a thin layer of compact bone. The irregular bones are: the vertebrC&, sacrum, coccyx, temporal, sphenoid, ethmoid, zygomatic, maxilla, mandible, palatine, inferior nasal concha, and hyoid. NMDCO_relaxed.owl UBERON:0011597 biolink:NamedThing bone of upper jaw Any bone that is part of the upper jaw skeleton. This includes (when present): the maxilla, the quadrate (in some species). NMDCO_relaxed.owl UBERON:0011094 biolink:NamedThing vertebra cartilage element The cartilaginous form of a vertebral element, a skeletal element that forms around the notochord and is part of the vertebral column. NMDCO_relaxed.owl UBERON:0011095 biolink:NamedThing vertebra pre-cartilage condensation The pre-cartilaginous form of a vertebral element, a skeletal element that forms around the notochord and is part of the vertebral column. NMDCO_relaxed.owl UBERON:0003458 biolink:NamedThing neck bone A bone that is part of a neck [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0013505 biolink:NamedThing cervical vertebra cartilage element A cervical vertebra endochondral element that is composed primarily of cartilage tissue. NMDCO_relaxed.owl UBERON:0013506 biolink:NamedThing cervical vertebra pre-cartilage condensation A cervical vertebra endochondral element that is composed primarily of a pre-cartilage condensation. NMDCO_relaxed.owl UBERON:0003457 biolink:NamedThing head bone A bone that is part of a head [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003828 biolink:NamedThing abdominal segment bone A bone that is part of an abdominal segment of trunk [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004766 biolink:NamedThing cranial bone A bone that is part of a cranium. NMDCO_relaxed.owl UBERON:0004768 biolink:NamedThing bone of lower jaw Any bone that is part of the lower jaw skeleton. This includes (when present): the dentary/mandible, the articular, the splenial, the suprangular. NMDCO_relaxed.owl UBERON:0006068 biolink:NamedThing bone of tail A bone that is part of a post-anal tail. NMDCO_relaxed.owl UBERON:0007719 biolink:NamedThing bone of reproductive organ A bone that is part of a reproductive organ. NMDCO_relaxed.owl UBERON:0007828 biolink:NamedThing girdle bone/zone A bone that is part of a appendage girdle region. NMDCO_relaxed.owl UBERON:0007829 biolink:NamedThing pectoral girdle bone A bone that is part of a pectoral girdle region. NMDCO_relaxed.owl UBERON:0007914 biolink:NamedThing bone of craniocervical region A bone that is part of a craniocervical region. NMDCO_relaxed.owl UBERON:0008909 biolink:NamedThing perichordal bone Bone element that is adjacent to the notochord. NMDCO_relaxed.owl UBERON:0010740 biolink:NamedThing bone of appendage girdle complex A bone that is part of an appendage girdle complex (i.e. any bone in a limb, fin or girdle). NMDCO_relaxed.owl UBERON:0010741 biolink:NamedThing bone of pectoral complex A bone that is part of a pectoral complex. Examples: scapula, manus phalanx, any carpal bone, any bone of the pectoral fin. NMDCO_relaxed.owl UBERON:0002522 biolink:NamedThing tunica media The middle layer of an artery or vein. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0002546 biolink:NamedThing cranial placode Ectodermal placode that develops in the head into a part of the sensory nervous system. With a few exceptions (lens, adenohypophyseal), cranial placodes are neurogenic. NMDCO_relaxed.owl UBERON:0009955 biolink:NamedThing neurogenic placode Cranial ectodermal placode with potential to develop into a component of the nervous system, such as nerves or ganglia. NMDCO_relaxed.owl UBERON:0011814 biolink:NamedThing non-neurogenic ectodermal placode Ectodermal placode that does not develop into a component of the nervous system. NMDCO_relaxed.owl UBERON:0002561 biolink:NamedThing lumen of central nervous system The cavity that is enclosed by the central nervous system. In vertebrates this is the cavity that includes as parts ventricular cavities and the central canal of the spinal cord that develops from the lumen of the neura tube. NMDCO_relaxed.owl UBERON:0010527 biolink:NamedThing cavity of bone organ An organ cavity that surrounded_by a bone. NMDCO_relaxed.owl UBERON:0005844 biolink:NamedThing spinal cord segment NMDCO_relaxed.owl UBERON:0003038 biolink:NamedThing thoracic spinal cord The thoracic nerves are the spinal nerves emerging from the thoracic vertebrae. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0005845 biolink:NamedThing caudal segment of spinal cord A spinal cord segment that adjacent_to a caudal region. NMDCO_relaxed.owl UBERON:0003067 biolink:NamedThing dorsolateral placode Lateral neurogenic placodes positioned dorsal of the epibranchial placodes. NMDCO_relaxed.owl UBERON:0003078 biolink:NamedThing epibranchial placode Focal thickenings of the embryonic ectoderm that form immediately dorsal and caudal of the clefts between the pharyngeal arches and that produce the neuroblasts that migrate and condense to form the distal cranial ganglia. NMDCO_relaxed.owl UBERON:0003070 biolink:NamedThing trigeminal placode complex A neurogenic placode that arises at the level of the midbrain-hindbrain boundary and develops into a trigeminal ganglion. NMDCO_relaxed.owl UBERON:0003084 biolink:NamedThing heart primordium Bilateral groups of cells consisting of three rows: one row of endocardial precursors medially and two rows of myocardical precursors laterally. The two populations fuse at the midline to form the heart rudiment or cone. NMDCO_relaxed.owl UBERON:0006227 biolink:NamedThing ethmoid bone primordium NMDCO_relaxed.owl UBERON:0006236 biolink:NamedThing tetrapod frontal bone primordium NMDCO_relaxed.owl UBERON:0012172 biolink:NamedThing stomach primordium A primordium that has the potential to develop into a stomach. NMDCO_relaxed.owl UBERON:0014903 biolink:NamedThing primordial vasculature A portion of tissue that will develop into vasculature. NMDCO_relaxed.owl UBERON:0005856 biolink:NamedThing developing mesenchymal condensation A delimited region of dense mesenchyme within looser mesenchyme. NMDCO_relaxed.owl UBERON:0005863 biolink:NamedThing cartilaginous condensation Cell condensation that is an aggregation of mesenchymal cells that are committed to differentiate into chondroblasts and chondrocytes. NMDCO_relaxed.owl UBERON:0005865 biolink:NamedThing pre-muscle condensation NMDCO_relaxed.owl UBERON:0005563 biolink:NamedThing trigeminal neural crest Cranial neural crest which gives rise to the trigeminal ganglion. NMDCO_relaxed.owl UBERON:0009920 biolink:NamedThing optic neural crest NMDCO_relaxed.owl UBERON:0003115 biolink:NamedThing pharyngeal arch 4 Contributes to development of the cartilage of the larynx, laryngeal, pharyngeal, and soft palate muscles, superior parathyroid gland, and C-cells of the thymus. NMDCO_relaxed.owl UBERON:0003117 biolink:NamedThing pharyngeal arch 6 The 6th pharyngeal arch. contributes to the development of the sternocleidomastoid and trapezius muscles. NMDCO_relaxed.owl UBERON:0004362 biolink:NamedThing pharyngeal arch 1 The first of the series of pharyngeal arches that develop into jaw bones or their homologs, and their associated nerves and arteries. NMDCO_relaxed.owl UBERON:0003118 biolink:NamedThing pharyngeal arch artery 1 The vessels formed within the first pair of branchial arches in embryogenesis. NMDCO_relaxed.owl UBERON:0003121 biolink:NamedThing pharyngeal arch artery 4 The vessels formed within the fourth pair of branchial arches in embryogenesis. NMDCO_relaxed.owl UBERON:0003123 biolink:NamedThing pharyngeal arch artery 6 The vessels formed within the sixth pair of branchial arches in embryogenesis. NMDCO_relaxed.owl UBERON:0011919 biolink:NamedThing yolk sac blood island Masses of developing blood cells attached to endothelium in the yolk sac. NMDCO_relaxed.owl UBERON:0003384 biolink:NamedThing skeletal muscle tissue of pharynx A portion of skeletal muscle tissue that is part of a pharynx [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003898 biolink:NamedThing skeletal muscle tissue of trunk A portion of skeletal muscle tissue in the trunk. NMDCO_relaxed.owl UBERON:0004495 biolink:NamedThing skeletal muscle tissue of diaphragm A portion of skeletal muscle tissue that is part of a diaphragm [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004830 biolink:NamedThing respiratory system skeletal muscle A portion of skeletal muscle tissue that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004831 biolink:NamedThing esophagus skeletal muscle A portion of skeletal muscle tissue that is part of a esophagus [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004832 biolink:NamedThing anal region skeletal muscle A portion of skeletal muscle tissue that is part of an anal region [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004833 biolink:NamedThing lip skeletal muscle A portion of skeletal muscle tissue that is part of a lip [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003389 biolink:NamedThing mesothelium of diaphragm A mesothelium that is part of a diaphragm [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003380 biolink:NamedThing cardiac muscle of left atrium A portion of cardiac muscle tissue that is part of a left atrium [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003383 biolink:NamedThing cardiac muscle tissue of interventricular septum A portion of cardiac muscle tissue that is part of an interventricular septum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004492 biolink:NamedThing cardiac muscle tissue of cardiac septum A portion of cardiac muscle tissue that is part of a cardiac septum [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003388 biolink:NamedThing mesothelium of pericardial cavity A mesothelium that is part of a pericardium [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003390 biolink:NamedThing mesothelium of pleural cavity A mesothelium that is part of a pleural cavity [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005669 biolink:NamedThing peritoneal cavity mesothelium A mesothelium that is part of a peritoneal cavity. NMDCO_relaxed.owl UBERON:0007188 biolink:NamedThing mesothelium of serous pericardium A mesothelium that is part of a serous pericardium. NMDCO_relaxed.owl UBERON:0015128 biolink:NamedThing subepicardial layer of epicardium NMDCO_relaxed.owl UBERON:0003406 biolink:NamedThing cartilage of respiratory system A cartilage element that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003601 biolink:NamedThing neck cartilage A cartilage that is part of a neck [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003932 biolink:NamedThing cartilage element of chondrocranium A cartilage element of chondrocranium. Example: neurocranial trabecula. NMDCO_relaxed.owl UBERON:0003933 biolink:NamedThing cranial cartilage A cartilage element that is part of the cranial skeleton. NMDCO_relaxed.owl UBERON:0011004 biolink:NamedThing pharyngeal arch cartilage A cartilage element that is part of a splanchnocranium. NMDCO_relaxed.owl UBERON:2001457 biolink:NamedThing postcranial axial cartilage Cartilage which is part of the axial skeleton. NMDCO_relaxed.owl UBERON:0003495 biolink:NamedThing respiratory system arteriole An arteriole that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003489 biolink:NamedThing respiratory system capillary endothelium An endothelium of capillary that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004848 biolink:NamedThing respiratory system arterial endothelium An endothelium of artery that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004849 biolink:NamedThing respiratory system venous endothelium An endothelium of vein that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003494 biolink:NamedThing respiratory system venule A venule that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:8410001 biolink:NamedThing small intestine venule Venule of villus of small intestine. NMDCO_relaxed.owl UBERON:8410008 biolink:NamedThing venule of anorectum A venule that is located in the anorectum. NMDCO_relaxed.owl UBERON:8410048 biolink:NamedThing venule of colon A venule located in the colon. NMDCO_relaxed.owl UBERON:8600024 biolink:NamedThing pulmonary venule A venule that is part of a lung and drains oxygenated blood from pulmonary capillaries. A pulmonary venule merges into a pulmonary vein branch that runs in the pulmonary interlobular septa. NMDCO_relaxed.owl UBERON:0003526 biolink:NamedThing respiratory system capillary A capillary that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0022292 biolink:NamedThing splenic arteriole NMDCO_relaxed.owl UBERON:8410004 biolink:NamedThing small intestine arteriole Arteriole of villus of small intestine. NMDCO_relaxed.owl UBERON:8410009 biolink:NamedThing arteriole of anorectum An arteriole that is located in the anorectum. NMDCO_relaxed.owl UBERON:8410015 biolink:NamedThing arteriole of colon An arteriole located in the colon. NMDCO_relaxed.owl UBERON:8410056 biolink:NamedThing capillary of anorectum A capillary that is part of the anorectum. NMDCO_relaxed.owl UBERON:8410057 biolink:NamedThing capillary of colon A capillary that is part of the colon. NMDCO_relaxed.owl UBERON:8410068 biolink:NamedThing capillary of small intestine A capillary that is part of a small intestine. NMDCO_relaxed.owl UBERON:8480001 biolink:NamedThing capillary of brain A capillary that is part of the brain. NMDCO_relaxed.owl UBERON:0003611 biolink:NamedThing respiratory system elastic tissue An elastic tissue that is part of a respiratory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003605 biolink:NamedThing eye skin gland A skin gland that is part of a camera-type eye [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003609 biolink:NamedThing aorta elastic tissue The dense connective tissue which contains predominantly elastic fibers and is found in the tunica media of the aorta wall. NMDCO_relaxed.owl UBERON:0003613 biolink:NamedThing cardiovascular system elastic tissue An elastic tissue that is part of a circulatory system [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0003615 biolink:NamedThing lung elastic tissue Elastic tissue that is part of a lung [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0036186 biolink:NamedThing fibroelastic connective tissue NMDCO_relaxed.owl UBERON:0003618 biolink:NamedThing aorta tunica media The middle layer of the aorta wall, containing the smooth muscle layer and elastic fibers. NMDCO_relaxed.owl UBERON:0006563 biolink:NamedThing tunica media of pulmonary trunk Tunica media of artery which is continuous with the myocardium of right ventricle.[FMA]. NMDCO_relaxed.owl UBERON:0007239 biolink:NamedThing tunica media of artery A tunica media that is part of a artery. NMDCO_relaxed.owl UBERON:0007243 biolink:NamedThing tunica media of vein A tunica media that is part of a vein. NMDCO_relaxed.owl UBERON:0003687 biolink:NamedThing foramen magnum In anatomy, in the occipital bone, the foramen magnum is one of the several oval or circular apertures in the base of the skull, through which the medulla oblongata (an extension of the spinal cord) enters and exits the skull vault. Apart from the transmission of the medulla oblongata and its membranes, the foramen magnum transmits the Spinal Accessory nerve, vertebral arteries, the anterior and posterior spinal arteries, the membrana tectoria and alar ligaments. [WP,unvetted]. NMDCO_relaxed.owl UBERON:0005613 biolink:NamedThing left dorsal aorta NMDCO_relaxed.owl UBERON:0005622 biolink:NamedThing right dorsal aorta NMDCO_relaxed.owl UBERON:0003849 biolink:NamedThing mesencephalic neural crest A neural crest that has_potential_to_developmentally_contribute_to a midbrain. NMDCO_relaxed.owl UBERON:0003852 biolink:NamedThing rhombencephalon neural crest A neural crest that has_potential_to_developmentally_contribute_to a hindbrain. NMDCO_relaxed.owl UBERON:0003853 biolink:NamedThing spinal cord neural crest A neural crest that has_potential_to_developmentally_contribute_to a spinal cord. NMDCO_relaxed.owl UBERON:0007098 biolink:NamedThing mandibular neural crest Cranial neural crest that migrates into the mandibular arch. NMDCO_relaxed.owl UBERON:0003854 biolink:NamedThing spinal cord neural plate A neural plate that develops_from a future spinal cord. NMDCO_relaxed.owl UBERON:0009610 biolink:NamedThing forebrain neural plate A neural plate that develops_from a future forebrain. NMDCO_relaxed.owl UBERON:0009611 biolink:NamedThing midbrain neural plate A neural plate that develops_from a presumptive midbrain. NMDCO_relaxed.owl UBERON:0009614 biolink:NamedThing hindbrain neural plate A neural plate that develops_from a presumptive hindbrain. NMDCO_relaxed.owl UBERON:0004015 biolink:NamedThing embryonic-extraembryonic boundary The connection between the embryo proper and extraembryonic tissues. NMDCO_relaxed.owl UBERON:0034706 biolink:NamedThing proliferating neuroepithelium An epithelium that is undergoing proliferation to provide large numbers of neuronal cells. NMDCO_relaxed.owl UBERON:0034707 biolink:NamedThing differentiating neuroepithelium A neuroepithelium some of whose cells are undergoing terminal differentiation to become neuronal cells. NMDCO_relaxed.owl UBERON:0004066 biolink:NamedThing frontonasal prominence The unpaired embryonic prominence that is formed by the tissues surrounding the forebrain vesicle and develops into the forehead and bridge of the nose/snout. NMDCO_relaxed.owl UBERON:0009292 biolink:NamedThing embryonic nasal process NMDCO_relaxed.owl UBERON:0004068 biolink:NamedThing medial nasal prominence The central area of the two limbs of a horseshoe-shaped mesenchymal swelling that lie medial to the olfactory placode or pit in the future nasal region of the embryo; it joins with the ipsilateral maxillary prominence in the formation of half of the upper jaw, and the nasal tip and philtrum of the upper lip develop from it. NMDCO_relaxed.owl UBERON:0004124 biolink:NamedThing myocardium trabecular layer The layer of the myocardium composed of projections of contractile myocytes. The trabecular layer is bounded internally by the endocardium. In zebrafish, unlike the trabeculations of higher vertebrates, both atrial and ventricular trabeculae have more strut-like character, and are more uniform without apparent regional differences[ZFA]. NMDCO_relaxed.owl UBERON:0004290 biolink:NamedThing dermomyotome The bilaminar epithelium formed from the myotome and dermatome. NMDCO_relaxed.owl UBERON:0015329 biolink:NamedThing respiratory system basement membrane A basement membrane of epithelium that is part of a respiratory system. NMDCO_relaxed.owl UBERON:0004525 biolink:NamedThing cardiac muscle tissue of trabecula carnea of right ventricle A portion of trabecula carnea cardiac muscle tissue that is part of a right ventricle [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004526 biolink:NamedThing cardiac muscle tissue of trabecula carnea of left ventricle A portion of trabecula carnea cardiac muscle tissue that is part of a left ventricle [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0004529 biolink:NamedThing anatomical projection A projection or outgrowth of tissue from a larger body or organ. NMDCO_relaxed.owl UBERON:0004571 biolink:NamedThing systemic arterial system The part of the arterial system which carries oxygenated blood away from the heart to the body, and returns deoxygenated blood back to the heart. NMDCO_relaxed.owl UBERON:0007240 biolink:NamedThing tunica adventitia of artery A tunica adventitia that is part of a artery. NMDCO_relaxed.owl UBERON:0007241 biolink:NamedThing tunica adventitia of vein A tunica adventitia that is part of a vein. NMDCO_relaxed.owl UBERON:0004710 biolink:NamedThing pectoral appendage Paired appendage that consists of the anterior appendicular skeleton and associated soft and hard tissues, but excludes the pectoral girdle and its associated soft and hard tissues. NMDCO_relaxed.owl UBERON:0004729 biolink:NamedThing nematode larval stage Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew. NMDCO_relaxed.owl UBERON:0004764 biolink:NamedThing intramembranous bone tissue Bone tissue that forms directly within mesenchyme, and does not replace other tissues[TAO]. Intramembranous ossification is the formation of bone in which osteoblasts secrete a collagen-proteoglycan matrix that binds calcium salts and becomes calcified[GO]. Intramembranous ossification is the way flat bones and the shell of a turtle are formed[GO]. Unlike endochondral ossification, cartilage is not present during intramembranous ossification[WP]. NMDCO_relaxed.owl UBERON:0010499 biolink:NamedThing pseudostratified ciliated columnar epithelium Epithelium composed of a single layer of cells, appearing as layered because the column-shaped cells vary in height so the nuclei are at different levels. The basal portions of all the cells are in contact with the basement membrane. It lines the respiratory system and the male reproductive tract. The cilia in the respiratory tract are motile, while the stereocilia in the male reproductive tract are immobile. NMDCO_relaxed.owl UBERON:0006931 biolink:NamedThing stomach glandular region mucosa Stomach mucosa that is lined with glandular epithelium and part of a stomach glandular region. NMDCO_relaxed.owl UBERON:0009196 biolink:NamedThing indifferent external genitalia NMDCO_relaxed.owl UBERON:0005234 biolink:NamedThing optic eminence ectoderm An ectoderm that is part of a optic eminence [Automatically generated definition]. NMDCO_relaxed.owl UBERON:0005662 biolink:NamedThing 4th arch ectoderm An ectoderm that is part of a pharyngeal arch 4. NMDCO_relaxed.owl UBERON:0009479 biolink:NamedThing ectoderm of buccopharyngeal membrane An ectoderm that is part of a buccopharyngeal membrane. NMDCO_relaxed.owl UBERON:0005239 biolink:NamedThing basal plate metencephalon NMDCO_relaxed.owl UBERON:0005337 biolink:NamedThing outflow tract of ventricle A ventricular outflow tract is a portion of either the left ventricle or right ventricle of the heart through which blood passes in order to enter the great arteries. The right ventricular outflow tract (RVOT) is an infundibular extension of the ventricular cavity which connects to the pulmonary artery. The left ventricular outflow tract (LVOT), which connects to the aorta, is nearly indistinguishable from the rest of the ventricle[WP]. NMDCO_relaxed.owl UBERON:0005338 biolink:NamedThing outflow tract aortic component An outflow tract that is part of a aorta. NMDCO_relaxed.owl UBERON:0005339 biolink:NamedThing outflow tract pulmonary component NMDCO_relaxed.owl UBERON:0005946 biolink:NamedThing outflow tract of atrium An outflow tract that is part of a cardiac atrium. NMDCO_relaxed.owl UBERON:0005398 biolink:NamedThing female reproductive gland A sex gland that is part of a female reproductive system. NMDCO_relaxed.owl UBERON:0005419 biolink:NamedThing pectoral appendage bud A limb bud that develops into a forelimb or pectoral fin. NMDCO_relaxed.owl UBERON:0005421 biolink:NamedThing pectoral appendage apical ectodermal ridge An apical ectodermal ridge that is part of a pectoral appendage bud. NMDCO_relaxed.owl UBERON:0005478 biolink:NamedThing sulcus limitans of neural tube A longitudinal groove in the neural tube wall that divides the neural tube into dorsal (alar) and ventral (basal) halves (dorsal receives input from sensory neurons, ventral effects motor functions); stretches from the mesencephalon caudad[TMD]. NMDCO_relaxed.owl UBERON:0005501 biolink:NamedThing rhombomere lateral wall A neural tube lateral wall that is part of a rhombomere. NMDCO_relaxed.owl UBERON:0005598 biolink:NamedThing trunk somite A somite that is part of a trunk. NMDCO_relaxed.owl UBERON:0009621 biolink:NamedThing tail somite A somite that is part of a tail. NMDCO_relaxed.owl UBERON:0005602 biolink:NamedThing dorsal mesogastrium The portion of mesentery attached to the greater curvature of the stomach is named the dorsal mesentery (or dorsal mesogastrium, when referring to the portion at the stomach), and the part which suspends the colon is termed the mesocolon. The dorsal mesogastrium develops into the greater omentum. NMDCO_relaxed.owl UBERON:0005666 biolink:NamedThing 4th arch endoderm An endoderm that is part of a pharyngeal arch 4. NMDCO_relaxed.owl UBERON:0009480 biolink:NamedThing endoderm of buccopharyngeal membrane An endoderm that is part of a buccopharyngeal membrane. NMDCO_relaxed.owl UBERON:0009550 biolink:NamedThing endoderm of foregut-midgut junction An endoderm that is part of a foregut-midgut junction. NMDCO_relaxed.owl UBERON:0005685 biolink:NamedThing midgut dorsal mesentery A dorsal mesentery that is part of a midgut. NMDCO_relaxed.owl UBERON:0005686 biolink:NamedThing caecum dorsal mesentery A dorsal mesentery that is part of a caecum. NMDCO_relaxed.owl UBERON:0012504 biolink:NamedThing adventitia of esophagus An adventitia that is part of a esophagus. NMDCO_relaxed.owl UBERON:0005867 biolink:NamedThing mandibular prominence The paired ventral prominences formed by bifurcation of the first pharyngeal arches in the embryo; the two prominences unite ventrally and fuse to form the mandible and lower lip. NMDCO_relaxed.owl UBERON:0005953 biolink:NamedThing outflow part of right ventricle Anteriosuperior, smooth-walled portion of the cavity of the right ventricle, beginning at the supraventricular crest and terminating in the pulmonary trunk. NMDCO_relaxed.owl UBERON:0005956 biolink:NamedThing outflow part of left ventricle Anterosuperior fibrous portion of the left ventricle that connects to the ascending aorta. NMDCO_relaxed.owl UBERON:0005965 biolink:NamedThing outflow part of right atrium Outflow part of atrium which consists of wall and cavity of the outflow part of right atrium and the tricuspid valve.[FMA]. NMDCO_relaxed.owl UBERON:0005966 biolink:NamedThing outflow part of left atrium An outflow tract of atrium that is part of a left atrium. NMDCO_relaxed.owl UBERON:0006056 biolink:NamedThing posterior surface of head NMDCO_relaxed.owl UBERON:0006677 biolink:NamedThing surface of epithelium An anatomical boundary that adjacent_to a epithelium. NMDCO_relaxed.owl UBERON:0008115 biolink:NamedThing surface of cartilage An anatomical surface that is part of a cartilage element. NMDCO_relaxed.owl UBERON:0022288 biolink:NamedThing surface of eyeball NMDCO_relaxed.owl UBERON:0006073 biolink:NamedThing thoracic region of vertebral column That part of the spine comprising the thoracic vertebrae. NMDCO_relaxed.owl UBERON:0006076 biolink:NamedThing caudal region of vertebral column Subdivision of vertebral column that corresponds to the caudal subdivision of the body, containing the caudal vertebrae. NMDCO_relaxed.owl UBERON:0009568 biolink:NamedThing trunk region of vertebral column Subdivision of vertebral column that corresponds to the trunk of the body, containing the trunk/presacral vertebrae. In organisms that have a thoracic and lumbar distinction, this corresponds to the sum of both of these regions. NMDCO_relaxed.owl UBERON:0006284 biolink:NamedThing early prosencephalic vesicle Future brain vesicle that gives rise to telencephalic ventricle/lateral ventricles and 3rd ventricle. NMDCO_relaxed.owl UBERON:0013150 biolink:NamedThing future brain vesicle NMDCO_relaxed.owl UBERON:0009676 biolink:NamedThing early telencephalic vesicle NMDCO_relaxed.owl UBERON:0006304 biolink:NamedThing future trigeminal ganglion NMDCO_relaxed.owl UBERON:0006518 biolink:NamedThing right lung lobe A lobe of lung that is part of a right lung. NMDCO_relaxed.owl UBERON:0008951 biolink:NamedThing left lung lobe A lobe of lung that is part of a left lung. NMDCO_relaxed.owl UBERON:0006566 biolink:NamedThing left ventricle myocardium A myocardium that is part of a left ventricle of a heart. NMDCO_relaxed.owl UBERON:0006567 biolink:NamedThing right ventricle myocardium A myocardium that is part of a right ventricle of a heart. NMDCO_relaxed.owl UBERON:0006570 biolink:NamedThing trabecula carnea of right ventricle A trabecula carnea that is part of a heart right ventricle. NMDCO_relaxed.owl UBERON:0006571 biolink:NamedThing trabecula carnea of left ventricle A trabecula carnea that is part of a heart left ventricle. NMDCO_relaxed.owl UBERON:0006828 biolink:NamedThing trabecula carnea of atrium The supporting bundles of muscular fibers lining the walls of the atria[MP]. NMDCO_relaxed.owl UBERON:0009617 biolink:NamedThing head paraxial mesoderm Bilateral mesenchymal mesoderm parallel and immediately adjacent to the neural tube/notochord; it generates a subset of extra-ocular, and other head, muscles. NMDCO_relaxed.owl UBERON:0007109 biolink:NamedThing meconium A dark greenish mass that accumulates in the bowel during fetal life and is discharged shortly after birth. NMDCO_relaxed.owl UBERON:0007389 biolink:NamedThing paired limb/fin cartilage A cartilage tissue that is part of a paired limb or fin. NMDCO_relaxed.owl UBERON:0008342 biolink:NamedThing intestinal villus of duodenum An intestinal villus in the duodenum. NMDCO_relaxed.owl UBERON:0008780 biolink:NamedThing inner cell mass derived epiblast An embryonic structure that is derived from the inner cell mass and lies above the hypoblast and gives rise to the three primary germ layers. NMDCO_relaxed.owl UBERON:0008816 biolink:NamedThing embryonic head A head that is part of a embryo. NMDCO_relaxed.owl UBERON:6000004 biolink:NamedThing panarthropod head NMDCO_relaxed.owl UBERON:6001730 biolink:NamedThing insect larval head Any head that is part of some larva. NMDCO_relaxed.owl UBERON:0011198 biolink:NamedThing muscle layer of large intestine A muscle layer that is part of a large intestine. NMDCO_relaxed.owl UBERON:0011201 biolink:NamedThing muscle layer of small intestine A muscle layer that is part of a small intestine. NMDCO_relaxed.owl UBERON:0011878 biolink:NamedThing muscle layer of esophagus A muscle layer that is part of a wall of esophagus. NMDCO_relaxed.owl UBERON:0012367 biolink:NamedThing muscle layer of intestine A muscle layer that is part of an intestine. NMDCO_relaxed.owl UBERON:0012486 biolink:NamedThing muscle layer of cloaca A muscular coat that is part of a cloaca. NMDCO_relaxed.owl UBERON:0012488 biolink:NamedThing muscle layer of duodenum A muscular coat that is part of a duodenum. NMDCO_relaxed.owl UBERON:0012489 biolink:NamedThing muscle layer of colon A muscular coat that is part of a colon. NMDCO_relaxed.owl UBERON:0018111 biolink:NamedThing muscle layer of rectum A muscle layer that is part of the rectum. NMDCO_relaxed.owl UBERON:0018261 biolink:NamedThing muscular coat of digestive tract A muscular coat that is part of a digestive tract. NMDCO_relaxed.owl UBERON:0035805 biolink:NamedThing muscle layer of sigmoid colon A muscle layer that is part of the sigmoid colon. NMDCO_relaxed.owl UBERON:0009030 biolink:NamedThing left pulmonary vein Vein that drains left lung and returns blood to the heart. NMDCO_relaxed.owl UBERON:0009032 biolink:NamedThing right pulmonary vein Vein that drains right lung and returns blood to the heart. NMDCO_relaxed.owl UBERON:0009472 biolink:NamedThing axilla The axilla is the area directly under the joint where the forelimb connects to the shoulder. NMDCO_relaxed.owl UBERON:0018692 biolink:NamedThing dorsal side of post-anal tail NMDCO_relaxed.owl UBERON:0009548 biolink:NamedThing hepatic sinusoid of left of lobe of liver A hepatic sinusoid that is part of a left lobe of liver. NMDCO_relaxed.owl UBERON:0009549 biolink:NamedThing hepatic sinusoid of right of lobe of liver A hepatic sinusoid that is part of a right lobe of liver. NMDCO_relaxed.owl UBERON:0009570 biolink:NamedThing spinal cord sulcus limitans A sulcus limitans of neural tube that is part of a future spinal cord. NMDCO_relaxed.owl UBERON:0009576 biolink:NamedThing medulla oblongata sulcus limitans A sulcus limitans of neural tube that is part of a future medulla oblongata. NMDCO_relaxed.owl UBERON:0009577 biolink:NamedThing metencephalon sulcus limitans A sulcus limitans of neural tube that is part of a future metencephalon. NMDCO_relaxed.owl UBERON:0009578 biolink:NamedThing myelencephalon sulcus limitans A sulcus limitans of neural tube that is part of a future myelencephalon. NMDCO_relaxed.owl UBERON:0009581 biolink:NamedThing midbrain mantle layer NMDCO_relaxed.owl UBERON:0009583 biolink:NamedThing spinal cord mantle layer NMDCO_relaxed.owl UBERON:0009712 biolink:NamedThing endocardium of right ventricle Any endocardium that is part of the right ventricle of the heart. NMDCO_relaxed.owl UBERON:0009713 biolink:NamedThing endocardium of left ventricle Any endocardium that is part of the left ventricle of the heart. NMDCO_relaxed.owl UBERON:0010152 biolink:NamedThing skin mucus A mucous secretion that is produced by glands in the epidermis. NMDCO_relaxed.owl UBERON:0016552 biolink:NamedThing phlegm Mucus produced in the respiratory tract. NMDCO_relaxed.owl UBERON:0016553 biolink:NamedThing respiratory system mucus Any mucus produced by a mucosae of the respiratory system. This includes the mucus produced in the nasal cavity (nasal mucus) and mucus produced in the respiratory tract (phlegm). NMDCO_relaxed.owl UBERON:0010194 biolink:NamedThing hepatic portal system A portal system that begins in capillaries in the wall of the digestive tract and and runs as the hepatic portal vein to the liver. NMDCO_relaxed.owl UBERON:0010304 biolink:NamedThing non-keratinized stratified squamous epithelium Stratified squamous epithelium is a stratified squamous epithelium, the cells of which synthesizes but does not accumulate keratin. Examples: epithelium of vagina, epithelium of wall of esophagus. NMDCO_relaxed.owl UBERON:0010528 biolink:NamedThing pneumatic cavity of bone NMDCO_relaxed.owl UBERON:0010708 biolink:NamedThing pectoral complex Appendage girdle complex that when present, encompasses the pectoral appendicular skeleton and the pectoral girdle. NMDCO_relaxed.owl UBERON:0011648 biolink:NamedThing jaw muscle NMDCO_relaxed.owl UBERON:0011695 biolink:NamedThing embryonic cardiovascular system A cardiovascular system that is part of a conceptus. NMDCO_relaxed.owl UBERON:0011863 biolink:NamedThing bone collagen fibril The connective tissue bundles in the extracellular matrix of bone tissue that are composed of collagen, and play a role in tissue strength and elasticity. NMDCO_relaxed.owl UBERON:0011864 biolink:NamedThing tendon collagen fibril The connective tissue bundles in the extracellular matrix of tendon tissue that are composed of collagen, and play a role in tissue strength and elasticity. NMDCO_relaxed.owl UBERON:0011955 biolink:NamedThing left hepatic vein A hepatic vein that is part of a left lobe of liver. NMDCO_relaxed.owl UBERON:0011956 biolink:NamedThing right hepatic vein A hepatic vein that is part of a right lobe of liver. NMDCO_relaxed.owl UBERON:0012485 biolink:NamedThing cloacal villus NMDCO_relaxed.owl UBERON:0034769 biolink:NamedThing lymphomyeloid tissue NMDCO_relaxed.owl UBERON:0012477 biolink:NamedThing dorsal part of neck The posterior region of the neck, including the suboccipital region. NMDCO_relaxed.owl UBERON:4100000 biolink:NamedThing skeletal element projection Anatomical projection that is composed of bone or cartilage tissue. NMDCO_relaxed.owl UBERON:0013755 biolink:NamedThing arterial blood A blood that is part of a artery. NMDCO_relaxed.owl UBERON:0013756 biolink:NamedThing venous blood A blood that is part of a vein. NMDCO_relaxed.owl UBERON:0013757 biolink:NamedThing capillary blood A blood that is part of a capillary. NMDCO_relaxed.owl UBERON:0014400 biolink:NamedThing hepatic sinusoidal space A sinusoidal space that is part of a hepatic sinusoid. NMDCO_relaxed.owl UBERON:0014404 biolink:NamedThing female anatomical structure A part of the body present only in females. NMDCO_relaxed.owl UBERON:0014610 biolink:NamedThing thoracic spinal cord ventral horn A ventral horn of spinal cord that is part of a thoracic spinal cord. NMDCO_relaxed.owl UBERON:0014621 biolink:NamedThing cervical spinal cord ventral horn A ventral horn of spinal cord that is part of a cervical spinal cord. NMDCO_relaxed.owl UBERON:0014613 biolink:NamedThing cervical spinal cord gray matter A gray matter of spinal cord that is part of a cervical spinal cord. NMDCO_relaxed.owl UBERON:0014636 biolink:NamedThing thoracic spinal cord gray matter A gray matter of spinal cord that is part of a thoracic spinal cord. NMDCO_relaxed.owl UBERON:0015480 biolink:NamedThing proper hepatic artery The hepatic artery proper (also proper hepatic artery), arises from the common hepatic artery and runs alongside the portal vein and the common bile duct to form the portal triad. The hepatic artery proper gives off a small supraduodenal artery to the duodenal bulb. Then the right gastric artery comes off and runs to the left along the lesser curvature of the stomach to meet the left gastric artery, which is a branch of the celiac trunk. It subsequently gives off the cystic artery, which feeds the gallbladder, before bifurcating into the right and left hepatic arteries. Of note, the right and left hepatic arteries may demonstrate variant anatomy. A replaced right hepatic artery may arise from the superior mesenteric artery (SMA) and a replaced left hepatic artery may arise from the left gastric artery. NMDCO_relaxed.owl UBERON:0018135 biolink:NamedThing fibrocollagenous connective tissue NMDCO_relaxed.owl UBERON:0034710 biolink:NamedThing spinal cord ventricular layer NMDCO_relaxed.owl UBERON:0034947 biolink:NamedThing gas in respiratory system Any portion of gas located in a part of the respiratory system. NMDCO_relaxed.owl UBERON:0034946 biolink:NamedThing gas excreted from digestive tract Any excreted gas that is produced by the digestive tract. NMDCO_relaxed.owl UBERON:0035159 biolink:NamedThing entire surface of organism Anatomical surface, which is the external surface of the whole body. Examples: There is only one body surface. NMDCO_relaxed.owl UBERON:4200230 biolink:NamedThing surface of bone An anatomical surface that is part of a bone. NMDCO_relaxed.owl UBERON:0036242 biolink:NamedThing post-embryonic notochord A notochord that has persisted beyond the embryonic stage. NMDCO_relaxed.owl UBERON:0036285 biolink:NamedThing wall of left ventricle Wall of ventricle which is continuous with the wall of aorta. NMDCO_relaxed.owl UBERON:0036286 biolink:NamedThing wall of right ventricle Wall of ventricle which is continuous with the wall of pulmonary trunk. NMDCO_relaxed.owl UBERON:0036288 biolink:NamedThing anterior wall of left ventricle NMDCO_relaxed.owl UBERON:0036289 biolink:NamedThing anterior wall of right ventricle Region of wall of right ventricle which is continuous with the lateral and septal walls of right ventricle. NMDCO_relaxed.owl UBERON:0039856 biolink:NamedThing right ovarian vein Ovarian vein, each instance of which is a tributary of some inferior vena cava that drains the right pampiniform plexus of some broad ligament. NMDCO_relaxed.owl UBERON:0039857 biolink:NamedThing left ovarian vein Ovarian vein, each instance of which is a tributary of some left renal vein that drains the left pampiniform plexus of some broad ligament. NMDCO_relaxed.owl UBERON:2007013 biolink:NamedThing preplacodal ectoderm Non neural ectoderm that surrounds the presumptive neural plate and gives rise to neurogenic placodes. NMDCO_relaxed.owl BFO:0000050 biolink:NamedThing part of a core relation that holds between a part and its whole NMDCO_relaxed.owl RO:0002131 biolink:NamedThing overlaps x overlaps y if and only if there exists some z such that x has part z and z part of y|x overlaps y iff they have some part in common. NMDCO_relaxed.owl BFO:0000051 biolink:NamedThing has part a core relation that holds between a whole and its part NMDCO_relaxed.owl RO:0001901 biolink:NamedThing axiom holds for all times ## Elucidation This is used when the statement/axiom is assumed to hold true 'eternally' ## How to interpret (informal) First the "atemporal" FOL is derived from the OWL using the standard interpretation. This axiom is temporalized by embedding the axiom within a for-all-times quantified sentence. The t argument is added to all instantiation predicates and predicates that use this relation. ## Example Class: nucleus SubClassOf: part_of some cell forall t : forall n : instance_of(n,Nucleus,t) implies exists c : instance_of(c,Cell,t) part_of(n,c,t) ## Notes This interpretation is *not* the same as an at-all-times relation NMDCO_relaxed.owl OBO:valid_for_go_annotation_extension biolink:NamedThing valid_for_go_annotation_extension NMDCO_relaxed.owl OBO:valid_for_go_gp2term biolink:NamedThing valid_for_go_gp2term NMDCO_relaxed.owl OBO:valid_for_go_ontology biolink:NamedThing valid_for_go_ontology NMDCO_relaxed.owl OBO:valid_for_gocam biolink:NamedThing valid_for_gocam NMDCO_relaxed.owl http://ontologydesignpatterns.org/wiki/Community:Parts_and_Collections biolink:NamedThing NMDCO_relaxed.owl http://ontologydesignpatterns.org/wiki/Submissions:PartOf biolink:NamedThing NMDCO_relaxed.owl BFO:0000054 biolink:NamedThing realized in NMDCO_relaxed.owl BFO:0000055 biolink:NamedThing realizes NMDCO_relaxed.owl OBO:bfo.owl biolink:NamedThing NMDCO_relaxed.owl OBO:iao.owl biolink:NamedThing NMDCO_relaxed.owl BFO:0000062 biolink:NamedThing preceded by The assertion P preceded_by P1 tells us something about Ps in general: that is, it tells us something about what happened earlier, given what we know about what happened later. Thus it does not provide information pointing in the opposite direction, concerning instances of P1 in general; that is, that each is such as to be succeeded by some instance of P.|x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. NMDCO_relaxed.owl RO:0002086 biolink:NamedThing ends after NMDCO_relaxed.owl BFO:0000063 biolink:NamedThing precedes x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. NMDCO_relaxed.owl OBO:ro/subsets#ro-eco biolink:NamedThing eco subset NMDCO_relaxed.owl RO:0002222 biolink:NamedThing temporally related to NMDCO_relaxed.owl BFO:0000066 biolink:NamedThing occurs in b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t NMDCO_relaxed.owl BFO:0000067 biolink:NamedThing contains process [copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t NMDCO_relaxed.owl BSPO:0000096 biolink:NamedThing anterior to x anterior to y iff x is further along the antero-posterior axis than y, towards the head. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail. NMDCO_relaxed.owl BSPO:0000099 biolink:NamedThing posterior to x posterior to y iff x is further along the antero-posterior axis than y, towards the body/tail. An antero-posterior axis is an axis that extends through an organism from head end to opposite end of body or tail. NMDCO_relaxed.owl FBcv:0000039 biolink:NamedThing NMDCO_relaxed.owl OBO:FBql_00005863 biolink:NamedThing NMDCO_relaxed.owl BSPO:0000097 biolink:NamedThing distal to x distal to y iff x is further along the proximo-distal axis than y, towards the appendage tip. A proximo-distal axis extends from tip of an appendage (distal) to where it joins the body (proximal). NMDCO_relaxed.owl BSPO:0000100 biolink:NamedThing proximal to x proximal to y iff x is closer to the point of attachment with the body than y. NMDCO_relaxed.owl FBcv:0000040 biolink:NamedThing NMDCO_relaxed.owl OBO:FBql_00005867 biolink:NamedThing NMDCO_relaxed.owl BSPO:0000098 biolink:NamedThing dorsal to x dorsal to y iff x is further along the dorso-ventral axis than y, towards the back. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly). NMDCO_relaxed.owl BSPO:0000102 biolink:NamedThing ventral to x ventral to y iff x is further along the dorso-ventral axis than y, towards the front. A dorso-ventral axis is an axis that extends through an organism from back (e.g. spinal column) to front (e.g. belly). NMDCO_relaxed.owl FBcv:0000041 biolink:NamedThing NMDCO_relaxed.owl OBO:FBql_00005865 biolink:NamedThing NMDCO_relaxed.owl FBcv:0000045 biolink:NamedThing NMDCO_relaxed.owl OBO:FBql_00005864 biolink:NamedThing NMDCO_relaxed.owl FBcv:0000047 biolink:NamedThing NMDCO_relaxed.owl OBO:FBql_00005868 biolink:NamedThing NMDCO_relaxed.owl FBcv:0000049 biolink:NamedThing NMDCO_relaxed.owl OBO:FBql_00005866 biolink:NamedThing NMDCO_relaxed.owl BSPO:0000107 biolink:NamedThing deep to Further away from the surface of the organism. Thus, the muscular layer is deep to the skin, but superficial to the intestines. NMDCO_relaxed.owl BSPO:0000108 biolink:NamedThing superficial to Near the outer surface of the organism. Thus, skin is superficial to the muscle layer. NMDCO_relaxed.owl BSPO:0000120 biolink:NamedThing in left side of X in left side of Y <=> if Y is subdivided into two left and right portions, X is part of the left portion. NMDCO_relaxed.owl BSPO:0000126 biolink:NamedThing in lateral side of X in lateral side of Y <=> if X is in left side of Y or X is in right side of Y. X is often, but not always a paired structure NMDCO_relaxed.owl BSPO:0000121 biolink:NamedThing in right side of X in right side of Y <=> if Y is subdivided into two left and right portions, X is part of the right portion. NMDCO_relaxed.owl BSPO:0000122 biolink:NamedThing in posterior side of X posterior side of Y <=> if Y is subdivided into two anterior and posterior portions, X is part of the posterior portion. NMDCO_relaxed.owl BSPO:0000123 biolink:NamedThing in anterior side of X anterior side of Y <=> if Y is subdivided into two anterior and posterior portions, X is part of the anterior portion. NMDCO_relaxed.owl BSPO:0000124 biolink:NamedThing in proximal side of x in proximal side of y <=> if y is subdivided into two proximal and distal portions, y is part of the proximal portion. NMDCO_relaxed.owl BSPO:0000125 biolink:NamedThing in distal side of x in distal side of y <=> if y is subdivided into two proximal and distal portions, y is part of the distal portion. NMDCO_relaxed.owl https://github.com/obophenotype/uberon/issues/2453 biolink:NamedThing NMDCO_relaxed.owl BSPO:0001106 biolink:NamedThing proximalmost part of X proximalmost part of Y <=> X is in proximal side of Y and X is adjacent to the proximal boundary of Y NMDCO_relaxed.owl BSPO:0001107 biolink:NamedThing immediately deep to x immediately deep to y iff x deep_to y and x is contiguous with y. NMDCO_relaxed.owl BSPO:0015014 biolink:NamedThing immediately superficial to x immediately superficial to y iff x superficial to y and x is contiguous with y. NMDCO_relaxed.owl BSPO:0001108 biolink:NamedThing distalmost part of X distalmost part of Y <=> X is in distal side of Y and X is adjacent to the distal boundary of Y NMDCO_relaxed.owl BSPO:0005001 biolink:NamedThing intersects midsagittal plane of X intersects median plane of iff X crosses the midine plane of Y. NMDCO_relaxed.owl RO:0002220 biolink:NamedThing adjacent to x adjacent to y if and only if x and y share a boundary. NMDCO_relaxed.owl BSPO:0015101 biolink:NamedThing in dorsal side of X dorsal side of Y <=> if Y is subdivided into two dorsal and ventral portions, X is part of the dorsal portion. NMDCO_relaxed.owl CL:4030045 biolink:NamedThing lacks_part NMDCO_relaxed.owl CL:4030046 biolink:NamedThing lacks_plasma_membrane_part NMDCO_relaxed.owl ENVO:01001307 biolink:NamedThing partially_surrounded_by x partially_surrounded_by y if and only if (1) x is adjacent to y and for the region r that is adjacent to x, r partially overlaps y (2) the shared boundary between x and y occupies a non-trivial proportion of the outermost boundary of x NMDCO_relaxed.owl ENVO:01003004 biolink:NamedThing derives from part of A relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist through the separation or transformation of a part of the old entity, and the new entity inherits a significant portion of the matter belonging to that part of the old entity. NMDCO_relaxed.owl ENVO:02000200 biolink:NamedThing has increased levels of A has part relationship between a whole and a part, where the number of parts present in the whole is higher than in comparable entities. NMDCO_relaxed.owl RO:0002180 biolink:NamedThing has component w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. NMDCO_relaxed.owl https://github.com/EnvironmentOntology/envo/issues/1380 biolink:NamedThing NMDCO_relaxed.owl ENVO:02500006 biolink:NamedThing results in transformation into NMDCO_relaxed.owl ENVO:02500016 biolink:NamedThing results in expansion of A process, p, results in the expansion of a material entity, m, if the spatial extent of m is increased as a result of participating in p. NMDCO_relaxed.owl ENVO:02500020 biolink:NamedThing results in proliferation of NMDCO_relaxed.owl ENVO:2000036 biolink:NamedThing generates A relation between a process and a disposition such that the existence of the disposition is caused by the execution of the process. NMDCO_relaxed.owl ORCID:0000-0002-6601-2165 biolink:NamedThing Christopher J. Mungall bioinformatics researcher NMDCO_relaxed.owl GOREL:0002003 biolink:NamedThing results in distribution of NMDCO_relaxed.owl GOREL:0002004 biolink:NamedThing results in fission of NMDCO_relaxed.owl RO:0000057 biolink:NamedThing has participant a relation between a process and a continuant, in which the continuant is somehow involved in the process NMDCO_relaxed.owl PO:0040001 biolink:NamedThing derives_by_manipulation_from A derives_by_manipulation_from B means: A is a type of in vitro plant structure, and every instance of A exists at a point in time later than some instance of B from which it was created through human manipulation, and every instance of A inherited a biologically significant portion of its matter from the instance of B from which it was derived. NMDCO_relaxed.owl PO:0040002 biolink:NamedThing isolated from germplasm NMDCO_relaxed.owl RO:0000052 biolink:NamedThing characteristic of a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence. NMDCO_relaxed.owl RO:0002314 biolink:NamedThing characteristic of part of q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w. NMDCO_relaxed.owl RO:0000053 biolink:NamedThing has characteristic Inverse of characteristic_of NMDCO_relaxed.owl RO:0000056 biolink:NamedThing participates in a relation between a continuant and a process, in which the continuant is somehow involved in the process NMDCO_relaxed.owl RO:0000058 biolink:NamedThing is concretized as A relationship between a generically dependent continuant and a specifically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. A generically dependent continuant may be concretized as multiple specifically dependent continuants. NMDCO_relaxed.owl RO:0000059 biolink:NamedThing concretizes A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant. NMDCO_relaxed.owl RO:0000079 biolink:NamedThing function of a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence NMDCO_relaxed.owl RO:0000085 biolink:NamedThing has function a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence NMDCO_relaxed.owl RO:0000080 biolink:NamedThing quality of a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence NMDCO_relaxed.owl RO:0000086 biolink:NamedThing has quality a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence NMDCO_relaxed.owl RO:0000081 biolink:NamedThing role of a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence NMDCO_relaxed.owl RO:0000087 biolink:NamedThing has role a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence NMDCO_relaxed.owl RO:0000091 biolink:NamedThing has disposition a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence NMDCO_relaxed.owl RO:0000092 biolink:NamedThing disposition of inverse of has disposition NMDCO_relaxed.owl RO:0002259 biolink:NamedThing defined by inverse NMDCO_relaxed.owl RO:0001000 biolink:NamedThing derives from a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity NMDCO_relaxed.owl RO:0001001 biolink:NamedThing derives into a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity NMDCO_relaxed.owl IAO:0000125 biolink:NamedThing pending final vetting All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor. NMDCO_relaxed.owl RO:0001015 biolink:NamedThing location of a relation between two independent continuants, the location and the target, in which the target is entirely within the location NMDCO_relaxed.owl RO:0001025 biolink:NamedThing located in a relation between two independent continuants, the target and the location, in which the target is entirely within the location NMDCO_relaxed.owl RO:0001020 biolink:NamedThing is allergic trigger for A relation between a material entity and a condition (a phenotype or disease) of a host, in which the material entity is not part of the host, and is considered harmless to non-allergic hosts, and the condition results in pathological processes that include an abnormally strong immune response against the material entity. NMDCO_relaxed.owl RO:0003302 biolink:NamedThing causes or contributes to condition A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some causal or contributing role that influences the condition. NMDCO_relaxed.owl RO:0001022 biolink:NamedThing has allergic trigger A relation between a condition (a phenotype or disease) of a host and a material entity, in which the material entity is not part of the host, and is considered harmless to non-allergic hosts, and the condition results in pathological processes that include an abnormally strong immune response against the material entity. NMDCO_relaxed.owl RO:0001021 biolink:NamedThing is autoimmune trigger for A relation between a material entity and a condition (a phenotype or disease) of a host, in which the material entity is part of the host itself, and the condition results in pathological processes that include an abnormally strong immune response against the material entity. NMDCO_relaxed.owl RO:0001023 biolink:NamedThing has autoimmune trigger A relation between a condition (a phenotype or disease) of a host and a material entity, in which the material entity is part of the host itself, and the condition results in pathological processes that include an abnormally strong immune response against the material entity. NMDCO_relaxed.owl RO:0002000 biolink:NamedThing 2D boundary of a relation between a 2D immaterial entity (the boundary) and a material entity, in which the boundary delimits the material entity NMDCO_relaxed.owl RO:0002323 biolink:NamedThing mereotopologically related to A mereological relationship or a topological relationship NMDCO_relaxed.owl RO:0002002 biolink:NamedThing has 2D boundary a relation between a material entity and a 2D immaterial entity (the boundary), in which the boundary delimits the material entity NMDCO_relaxed.owl RO:0002001 biolink:NamedThing aligned with NMDCO_relaxed.owl ORCID:0000-0002-7073-9172 biolink:NamedThing David Osumi-Sutherland researcher NMDCO_relaxed.owl RO:0002003 biolink:NamedThing electrically_synapsed_to A relation that holds between two neurons that are electrically coupled via gap junctions. NMDCO_relaxed.owl RO:0002170 biolink:NamedThing connected to a is connected to b if and only if a and b are discrete structure, and there exists some connecting structure c, such that c connects a and b NMDCO_relaxed.owl PMID:22402613 biolink:NamedThing NMDCO_relaxed.owl RO:0002004 biolink:NamedThing tracheates The relationship that holds between a trachea or tracheole and an antomical structure that is contained in (and so provides an oxygen supply to). NMDCO_relaxed.owl RO:0002005 biolink:NamedThing innervated_by NMDCO_relaxed.owl RO:0002134 biolink:NamedThing innervates Relation between a 'neuron projection bundle' and a region in which one or more of its component neuron projections either synapses to targets or receives synaptic input. T innervates some R Expands_to: T has_fasciculating_neuron_projection that synapse_in some R. NMDCO_relaxed.owl RO:0002006 biolink:NamedThing has synaptic terminal of NMDCO_relaxed.owl RO:0002130 biolink:NamedThing has synaptic terminal in A general relation between a neuron and some structure in which it either chemically synapses to some target or in which it receives (chemical) synaptic input. NMDCO_relaxed.owl RO:0002007 biolink:NamedThing bounding layer of X outer_layer_of Y iff: . X :continuant that bearer_of some PATO:laminar . X part_of Y . exists Z :surface . X has_boundary Z . Z boundary_of Y has_boundary: http://purl.obolibrary.org/obo/RO_0002002 boundary_of: http://purl.obolibrary.org/obo/RO_0002000 NMDCO_relaxed.owl RO:0002008 biolink:NamedThing coincident with A relation that holds between two linear structures that are approximately parallel to each other for their entire length and where either the two structures are adjacent to each other or one is part of the other. NMDCO_relaxed.owl RO:0002009 biolink:NamedThing cell expresses A relation that applies between a cell(c) and a gene(g) , where the process of 'transcription, DNA templated (GO_0006351)' is occuring in in cell c and that process has input gene g.|x 'cell expresses' y iff: cell(x) AND gene(y) AND exists some 'transcription, DNA templated (GO_0006351)'(t) AND t occurs_in x AND t has_input y NMDCO_relaxed.owl RO:0002292 biolink:NamedThing expresses y expresses x if and only if there is a gene expression process (GO:0010467) that occurs in y, and one of the following holds: (i) x is a gene, and x is transcribed into a transcript as part of the gene expression process (ii) x is a transcript, and x was transcribed from a gene as part of the gene expression process (iii) x is a mature gene product (protein or RNA), and x was translated or otherwise processed from a transcript that was transcribed as part of the gene expression process. NMDCO_relaxed.owl RO:0002010 biolink:NamedThing regulates in another organism x 'regulates in other organism' y if and only if: (x is the realization of a function to exert an effect on the frequency, rate or extent of y) AND (the agents of x are produced by organism o1 and the agents of y are produced by organism o2). NMDCO_relaxed.owl RO:0002418 biolink:NamedThing causally upstream of or within p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q. NMDCO_relaxed.owl RO:0002011 biolink:NamedThing regulates transport of A relationship that holds between a process that regulates a transport process and the entity transported by that process. NMDCO_relaxed.owl RO:0002012 biolink:NamedThing occurrent part of A part of relation that applies only between occurrents. NMDCO_relaxed.owl RO:0002013 biolink:NamedThing has regulatory component activity A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B. NMDCO_relaxed.owl RO:0002017 biolink:NamedThing has component activity NMDCO_relaxed.owl RO:0002334 biolink:NamedThing regulated by inverse of regulates NMDCO_relaxed.owl RO:0002014 biolink:NamedThing has negative regulatory component activity A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B. NMDCO_relaxed.owl RO:0002335 biolink:NamedThing negatively regulated by inverse of negatively regulates NMDCO_relaxed.owl RO:0002015 biolink:NamedThing has positive regulatory component activity A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole. More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B. NMDCO_relaxed.owl RO:0002336 biolink:NamedThing positively regulated by inverse of positively regulates NMDCO_relaxed.owl RO:0002016 biolink:NamedThing has necessary component activity NMDCO_relaxed.owl RO:0002018 biolink:NamedThing has component process w 'has process component' p if p and w are processes, w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. NMDCO_relaxed.owl RO:0002019 biolink:NamedThing has ligand A relationship that holds between between a receptor and an chemical entity, typically a small molecule or peptide, that carries information between cells or compartments of a cell and which binds the receptor and regulates its effector function. NMDCO_relaxed.owl RO:0002233 biolink:NamedThing has input p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p. NMDCO_relaxed.owl RO:0002020 biolink:NamedThing transports Holds between p and c when p is a transport process or transporter activity and the outcome of this p is to move c from one location to another. NMDCO_relaxed.owl RO:0002313 biolink:NamedThing transports or maintains localization of Holds between p and c when p is a localization process (localization covers maintenance of localization as well as its establishment) and the outcome of this process is to regulate the localization of c. NMDCO_relaxed.owl RO:0002021 biolink:NamedThing occurs across A relationship between a process and a barrier, where the process occurs in a region spanning the barrier. For cellular processes the barrier is typically a membrane. Examples include transport across a membrane and membrane depolarization. NMDCO_relaxed.owl RO:0002479 biolink:NamedThing has part that occurs in p has part that occurs in c if and only if there exists some p1, such that p has_part p1, and p1 occurs in c. NMDCO_relaxed.owl RO:0002022 biolink:NamedThing directly regulated by NMDCO_relaxed.owl RO:0002578 biolink:NamedThing directly regulates p directly regulates q iff p is immediately causally upstream of q and p regulates q. NMDCO_relaxed.owl RO:0002023 biolink:NamedThing directly negatively regulated by Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1. NMDCO_relaxed.owl RO:0002630 biolink:NamedThing directly negatively regulates p directly negatively regulates q iff p is immediately causally upstream of q, and p negatively regulates q. NMDCO_relaxed.owl RO:0002024 biolink:NamedThing directly positively regulated by Process(P2) is directly postively regulated by process(P1) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P2 is directly postively regulated by P1. NMDCO_relaxed.owl RO:0002629 biolink:NamedThing directly positively regulates p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q. NMDCO_relaxed.owl RO:0002025 biolink:NamedThing has effector activity A 'has effector activity' B if A and B are GO molecular functions (GO_0003674), A 'has component activity' B and B is the effector (output function) of B. Each compound function has only one effector activity. NMDCO_relaxed.owl RO:0002026 biolink:NamedThing in register with A relationship that holds between two images, A and B, where: A depicts X; B depicts Y; X and Y are both of type T' C is a 2 layer image consiting of layers A and B; A and B are aligned in C according to a shared co-ordinate framework so that common features of X and Y are co-incident with each other. Note: A and B may be 2D or 3D. Examples include: the relationship between two channels collected simultaneously from a confocal microscope; the relationship between an image dpeicting X and a painted annotation layer that delineates regions of X; the relationship between the tracing of a neuron on an EM stack and the co-ordinate space of the stack; the relationship between two separately collected images that have been brought into register via some image registration software. NMDCO_relaxed.owl RO:0002081 biolink:NamedThing before or simultaneous with NMDCO_relaxed.owl RO:0002082 biolink:NamedThing simultaneous with x simultaneous with y iff ω(x) = ω(y) and ω(α ) = ω(α), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point and '=' indicates the same instance in time. NMDCO_relaxed.owl RO:0002083 biolink:NamedThing before NMDCO_relaxed.owl RO:0002084 biolink:NamedThing during which ends NMDCO_relaxed.owl RO:0002093 biolink:NamedThing ends during NMDCO_relaxed.owl RO:0002085 biolink:NamedThing encompasses NMDCO_relaxed.owl RO:0002088 biolink:NamedThing during which starts NMDCO_relaxed.owl RO:0002092 biolink:NamedThing happens during NMDCO_relaxed.owl RO:0002087 biolink:NamedThing immediately preceded by NMDCO_relaxed.owl RO:0002090 biolink:NamedThing immediately precedes NMDCO_relaxed.owl RO:0002091 biolink:NamedThing starts during NMDCO_relaxed.owl RO:0002089 biolink:NamedThing starts before NMDCO_relaxed.owl RO:0002100 biolink:NamedThing has soma location Relation between a neuron and a material anatomical entity that its soma is part of. NMDCO_relaxed.owl RO:0002101 biolink:NamedThing fasciculates with relationship between a neuron and a neuron projection bundle (e.g.- tract or nerve bundle) that one or more of its projections travels through. NMDCO_relaxed.owl RO:0002132 biolink:NamedThing has fasciculating neuron projection The relation between a neuron projection bundle and a neuron projection that is fasciculated with it. NMDCO_relaxed.owl RO:0002102 biolink:NamedThing axon synapses in Relation between a neuron and some structure its axon forms (chemical) synapses in. NMDCO_relaxed.owl RO:0002113 biolink:NamedThing has presynaptic terminal in Relation between a neuron and some structure (e.g.- a brain region) in which it receives (chemical) synaptic input. NMDCO_relaxed.owl RO:0002103 biolink:NamedThing synapsed by Relation between an anatomical structure (including cells) and a neuron that chemically synapses to it. NMDCO_relaxed.owl RO:0002485 biolink:NamedThing receives input from NMDCO_relaxed.owl RO:0002120 biolink:NamedThing synapsed to Relation between a neuron and an anatomical structure (including cells) that it chemically synapses to. NMDCO_relaxed.owl RO:0002104 biolink:NamedThing has plasma membrane part Holds between a cell c and a protein complex or protein p if and only if that cell has as part a plasma_membrane[GO:0005886], and that plasma membrane has p as part. NMDCO_relaxed.owl ORCID:0000-0001-9990-8331 biolink:NamedThing NMDCO_relaxed.owl ORCID:0000-0003-1617-8244 biolink:NamedThing Lindsay G Cowell researcher NMDCO_relaxed.owl PMID:19243617 biolink:NamedThing NMDCO_relaxed.owl RO:0002105 biolink:NamedThing synapsed_via_type_Ib_bouton_to A relation between a motor neuron and a muscle that it synapses to via a type Ib bouton. NMDCO_relaxed.owl RO:0002109 biolink:NamedThing synapsed_by_via_type_Ib_bouton Relation between a muscle and a motor neuron that synapses to it via a type Ib bouton. NMDCO_relaxed.owl ORCID:0000-0001-5948-3092 biolink:NamedThing NMDCO_relaxed.owl RO:0002106 biolink:NamedThing synapsed_via_type_Is_bouton_to A relation between a motor neuron and a muscle that it synapses to via a type Is bouton. NMDCO_relaxed.owl RO:0002112 biolink:NamedThing synapsed_by_via_type_Is_bouton Relation between a muscle and a motor neuron that synapses to it via a type Is bouton. NMDCO_relaxed.owl RO:0002107 biolink:NamedThing synapsed_via_type_II_bouton_to A relation between a motor neuron and a muscle that it synapses to via a type II bouton. NMDCO_relaxed.owl RO:0002108 biolink:NamedThing synapsed_by_via_type_II_bouton Relation between a muscle and a motor neuron that synapses to it via a type II bouton. NMDCO_relaxed.owl RO:0002110 biolink:NamedThing has postsynaptic terminal in Relation between a neuron and some structure (e.g.- a brain region) in which it receives (chemical) synaptic input. NMDCO_relaxed.owl RO:0002111 biolink:NamedThing releases neurotransmitter NMDCO_relaxed.owl RO:0002114 biolink:NamedThing synapsed_via_type_III_bouton_to A relation between a motor neuron and a muscle that it synapses to via a type III bouton. NMDCO_relaxed.owl RO:0002115 biolink:NamedThing synapsed_by_via_type_III_bouton Relation between a muscle and a motor neuron that synapses to it via a type III bouton. NMDCO_relaxed.owl RO:0002486 biolink:NamedThing sends output to NMDCO_relaxed.owl RO:0002121 biolink:NamedThing dendrite synapsed in Relation between a neuron and some structure (e.g.- a brain region) in which its dendrite receives synaptic input. NMDCO_relaxed.owl RO:0002150 biolink:NamedThing continuous with X continuous_with Y if and only if X and Y share a fiat boundary. NMDCO_relaxed.owl RO:0002151 biolink:NamedThing partially overlaps x partially overlaps y iff there exists some z such that z is part of x and z is part of y, and it is also the case that neither x is part of y or y is part of x NMDCO_relaxed.owl RO:0002156 biolink:NamedThing derived by descent from d derived_by_descent_from a if d is specified by some genetic program that is sequence-inherited-from a genetic program that specifies a. NMDCO_relaxed.owl RO:0002320 biolink:NamedThing evolutionarily related to A relationship that holds via some environmental process NMDCO_relaxed.owl RO:0002157 biolink:NamedThing has derived by descendant inverse of derived by descent from NMDCO_relaxed.owl RO:0002158 biolink:NamedThing shares ancestor with two individual entities d1 and d2 stand in a shares_ancestor_with relation if and only if there exists some a such that d1 derived_by_descent_from a and d2 derived_by_descent_from a. NMDCO_relaxed.owl RO:0002159 biolink:NamedThing serially homologous to NMDCO_relaxed.owl RO:0002160 biolink:NamedThing only in taxon x only in taxon y if and only if x is in taxon y, and there is no other organism z such that y!=z a and x is in taxon z. NMDCO_relaxed.owl RO:0002162 biolink:NamedThing in taxon x is in taxon y if an only if y is an organism, and the relationship between x and y is one of: part of (reflexive), developmentally preceded by, derives from, secreted by, expressed. NMDCO_relaxed.owl PMID:17921072 biolink:NamedThing NMDCO_relaxed.owl PMID:20973947 biolink:NamedThing NMDCO_relaxed.owl https://github.com/obophenotype/uberon/wiki/Taxon-constraints biolink:NamedThing NMDCO_relaxed.owl ORCID:0000-0001-9227-417X biolink:NamedThing NMDCO_relaxed.owl RO:0002163 biolink:NamedThing spatially disjoint from A is spatially_disjoint_from B if and only if they have no parts in common NMDCO_relaxed.owl PMID:22293552 biolink:NamedThing NMDCO_relaxed.owl RO:0002176 biolink:NamedThing connects c connects a if and only if there exist some b such that a and b are similar parts of the same system, and c connects b, specifically, c connects a with b. When one structure connects two others it unites some aspect of the function or role they play within the system. NMDCO_relaxed.owl RO:0002177 biolink:NamedThing attached to part of a is attached to part of b if a is attached to b, or a is attached to some p, where p is part of b. NMDCO_relaxed.owl RO:0002567 biolink:NamedThing biomechanically related to A relation that holds between elements of a musculoskeletal system or its analogs. NMDCO_relaxed.owl RO:0002178 biolink:NamedThing supplies Relation between an arterial structure and another structure, where the arterial structure acts as a conduit channeling fluid, substance or energy. NMDCO_relaxed.owl PMID:20064205 biolink:NamedThing NMDCO_relaxed.owl RO:0002179 biolink:NamedThing drains Relation between an collecting structure and another structure, where the collecting structure acts as a conduit channeling fluid, substance or energy away from the other structure. NMDCO_relaxed.owl http://ontologydesignpatterns.org/wiki/Submissions:Componency biolink:NamedThing NMDCO_relaxed.owl RO:0002200 biolink:NamedThing has phenotype A relationship that holds between a biological entity and a phenotype. Here a phenotype is construed broadly as any kind of quality of an organism part, a collection of these qualities, or a change in quality or qualities (e.g. abnormally increased temperature). The subject of this relationship can be an organism (where the organism has the phenotype, i.e. the qualities inhere in parts of this organism), a genomic entity such as a gene or genotype (if modifications of the gene or the genotype causes the phenotype), or a condition such as a disease (such that if the condition inheres in an organism, then the organism has the phenotype). NMDCO_relaxed.owl RO:0016001 biolink:NamedThing has phenotype or disease NMDCO_relaxed.owl RO:0002201 biolink:NamedThing phenotype of inverse of has phenotype NMDCO_relaxed.owl RO:0002202 biolink:NamedThing develops from x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y NMDCO_relaxed.owl RO:0002254 biolink:NamedThing has developmental contribution from x has developmental contribution from y iff x has some part z such that z develops from y NMDCO_relaxed.owl RO:0002258 biolink:NamedThing developmentally preceded by Candidate definition: x developmentally related to y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p|X developmentally related to y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p. NMDCO_relaxed.owl RO:0002203 biolink:NamedThing develops into inverse of develops from NMDCO_relaxed.owl ORCID:0000-0001-9114-8737 biolink:NamedThing NMDCO_relaxed.owl ORCID:0000-0003-1980-3228 biolink:NamedThing NMDCO_relaxed.owl RO:0002286 biolink:NamedThing developmentally succeeded by Inverse of developmentally preceded by NMDCO_relaxed.owl RO:0002387 biolink:NamedThing has potential to develop into x has the potential to develop into y iff x develops into y or if x is capable of developing into y NMDCO_relaxed.owl RO:0002388 biolink:NamedThing has potential to directly develop into x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y NMDCO_relaxed.owl RO:0002204 biolink:NamedThing gene product of definition "x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from x" NMDCO_relaxed.owl RO:0002330 biolink:NamedThing genomically related to holds between two entities when some genome-level process such as gene expression is involved. This includes transcriptional, spliceosomal events. These relations can be used between either macromolecule entities (such as regions of nucleic acid) or between their abstract informational counterparts. NMDCO_relaxed.owl RO:0002205 biolink:NamedThing has gene product x has gene product y if and only if x is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from y NMDCO_relaxed.owl RO:0002206 biolink:NamedThing expressed in x expressed in y if and only if there is a gene expression process (GO:0010467) that occurs in y, and one of the following holds: (i) x is a gene, and x is transcribed into a transcript as part of the gene expression process (ii) x is a transcript, and the transcription of x is part of the gene expression process (iii) x is a mature gene product such as a protein, and x was translated or otherwise processes from a transcript that was transcribed as part of this gene expression process NMDCO_relaxed.owl RO:0002207 biolink:NamedThing directly develops from Candidate definition: x directly_develops from y if and only if there exists some developmental process (GO:0032502) p such that x and y both participate in p, and x is the output of p and y is the input of p, and a substantial portion of the matter of x comes from y, and the start of x is coincident with or after the end of y. NMDCO_relaxed.owl RO:0002210 biolink:NamedThing directly develops into inverse of directly develops from NMDCO_relaxed.owl RO:0002208 biolink:NamedThing parasitoid of A parasite that kills or sterilizes its host NMDCO_relaxed.owl RO:0002444 biolink:NamedThing parasite of NMDCO_relaxed.owl RO:0002209 biolink:NamedThing has parasitoid inverse of parasitoid of NMDCO_relaxed.owl RO:0002445 biolink:NamedThing parasitized by NMDCO_relaxed.owl RO:0002211 biolink:NamedThing regulates p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q. NMDCO_relaxed.owl RO:0002411 biolink:NamedThing causally upstream of p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q. NMDCO_relaxed.owl ORCID:0000-0001-7476-6306 biolink:NamedThing NMDCO_relaxed.owl ORCID:0000-0002-3837-8864 biolink:NamedThing NMDCO_relaxed.owl OBO:ro/docs/causal-relations biolink:NamedThing NMDCO_relaxed.owl RO:0002212 biolink:NamedThing negatively regulates p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q. NMDCO_relaxed.owl RO:0002305 biolink:NamedThing causally upstream of, negative effect p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q. NMDCO_relaxed.owl RO:0002213 biolink:NamedThing positively regulates p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q. NMDCO_relaxed.owl RO:0002304 biolink:NamedThing causally upstream of, positive effect p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q. NMDCO_relaxed.owl RO:0002214 biolink:NamedThing has prototype x has prototype y if and only if x is an instance of C and y is a prototypical instance of C. For example, every instance of heart, both normal and abnormal is related by the has prototype relation to some instance of a "canonical" heart, which participates in blood circulation. NMDCO_relaxed.owl RO:0002215 biolink:NamedThing capable of A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. NMDCO_relaxed.owl RO:0002216 biolink:NamedThing capable of part of c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p. NMDCO_relaxed.owl PMID:20123131 biolink:NamedThing NMDCO_relaxed.owl PMID:21208450 biolink:NamedThing NMDCO_relaxed.owl RO:0002328 biolink:NamedThing functionally related to A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities. NMDCO_relaxed.owl RO:0002500 biolink:NamedThing causal agent in process A relationship between a material entity and a process where the material entity has some causal role that influences the process NMDCO_relaxed.owl OBO:ro/docs/reflexivity/ biolink:NamedThing NMDCO_relaxed.owl RO:0002219 biolink:NamedThing surrounded by x surrounded_by y if and only if (1) x is adjacent to y and for every region r that is adjacent to x, r overlaps y (2) the shared boundary between x and y occupies the majority of the outermost boundary of x NMDCO_relaxed.owl RO:0002221 biolink:NamedThing surrounds inverse of surrounded by NMDCO_relaxed.owl https://en.wikipedia.org/wiki/Allen%27s_interval_algebra biolink:NamedThing NMDCO_relaxed.owl RO:0002223 biolink:NamedThing starts inverse of starts with NMDCO_relaxed.owl RO:0002224 biolink:NamedThing starts with x starts with y if and only if x has part y and the time point at which x starts is equivalent to the time point at which y starts. Formally: α(y) = α(x) ∧ ω(y) < ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. NMDCO_relaxed.owl RO:0002225 biolink:NamedThing develops from part of x develops from part of y if and only if there exists some z such that x develops from z and z is part of y NMDCO_relaxed.owl RO:0002226 biolink:NamedThing develops in x develops_in y if x is located in y whilst x is developing NMDCO_relaxed.owl RO:0002227 biolink:NamedThing obligate parasite of A sub-relation of parasite-of in which the parasite that cannot complete its life cycle without a host. NMDCO_relaxed.owl RO:0002228 biolink:NamedThing facultative parasite of A sub-relations of parasite-of in which the parasite that can complete its life cycle independent of a host. NMDCO_relaxed.owl RO:0002229 biolink:NamedThing ends inverse of ends with NMDCO_relaxed.owl RO:0002230 biolink:NamedThing ends with x ends with y if and only if x has part y and the time point at which x ends is equivalent to the time point at which y ends. Formally: α(y) > α(x) ∧ ω(y) = ω(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point. NMDCO_relaxed.owl RO:0002231 biolink:NamedThing has start location x 'has starts location' y if and only if there exists some process z such that x 'starts with' z and z 'occurs in' y NMDCO_relaxed.owl RO:0002232 biolink:NamedThing has end location x 'has end location' y if and only if there exists some process z such that x 'ends with' z and z 'occurs in' y NMDCO_relaxed.owl RO:0002352 biolink:NamedThing input of inverse of has input NMDCO_relaxed.owl RO:0002234 biolink:NamedThing has output p has output c iff c is a participant in p, c is present at the end of p, and c is not present in the same state at the beginning of p. NMDCO_relaxed.owl RO:0002353 biolink:NamedThing output of inverse of has output NMDCO_relaxed.owl RO:0002235 biolink:NamedThing stem parasite of A parasite-of relationship in which the host is a plant and the parasite that attaches to the host stem (PO:0009047) NMDCO_relaxed.owl RO:0002236 biolink:NamedThing root parasite of A parasite-of relationship in which the host is a plant and the parasite that attaches to the host root (PO:0009005) NMDCO_relaxed.owl RO:0002237 biolink:NamedThing hemiparasite of A sub-relation of parasite-of in which the parasite is a plant, and the parasite is parasitic under natural conditions and is also photosynthetic to some degree. Hemiparasites may just obtain water and mineral nutrients from the host plant. Many obtain at least part of their organic nutrients from the host as well. NMDCO_relaxed.owl RO:0002238 biolink:NamedThing has component participant X 'has component participant' Y means X 'has participant' Y and there is a cardinality constraint that specifies the numbers of Ys. NMDCO_relaxed.owl ORCID:0000-0001-9625-1899 biolink:NamedThing NMDCO_relaxed.owl RO:0002240 biolink:NamedThing has exposure receptor A broad relationship between an exposure event or process and any entity (e.g., an organism, organism population, or an organism part) that interacts with an exposure stimulus during the exposure event. NMDCO_relaxed.owl RO:0002244 biolink:NamedThing related via exposure to Any relationship between an exposure event or process and any other entity. NMDCO_relaxed.owl RO:0002241 biolink:NamedThing has exposure stressor A broad relationship between an exposure event or process and any agent, stimulus, activity, or event that causes stress or tension on an organism and interacts with an exposure receptor during an exposure event. NMDCO_relaxed.owl RO:0002309 biolink:NamedThing has exposure stimulus A relationship between an exposure event or process and any agent, stimulus, activity, or event that causally effects an organism and interacts with an exposure receptor during an exposure event. NMDCO_relaxed.owl RO:0002242 biolink:NamedThing has exposure route A broad relationship between an exposure event or process and a process by which the exposure stressor comes into contact with the exposure receptor NMDCO_relaxed.owl RO:0002243 biolink:NamedThing has exposure transport path A broad relationship between an exposure event or process and the course takes from the source to the target. NMDCO_relaxed.owl RO:0002410 biolink:NamedThing causally related to relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause. NMDCO_relaxed.owl RO:0002245 biolink:NamedThing over-expressed in g is over-expressed in t iff g is expressed in t, and the expression level of g is increased relative to some background. NMDCO_relaxed.owl RO:0002246 biolink:NamedThing under-expressed in g is under-expressed in t iff g is expressed in t, and the expression level of g is decreased relative to some background. NMDCO_relaxed.owl RO:0002248 biolink:NamedThing has active ingredient A relationship that holds between a substance and a chemical entity, if the chemical entity is part of the substance, and the chemical entity forms the biologically active component of the substance. NMDCO_relaxed.owl RO:0002249 biolink:NamedThing active ingredient in inverse of has active ingredient NMDCO_relaxed.owl RO:0002252 biolink:NamedThing connecting branch of b connecting-branch-of s iff b is connected to s, and there exists some tree-like structure t such that the mereological sum of b plus s is either the same as t or a branching-part-of t. NMDCO_relaxed.owl RO:0002375 biolink:NamedThing in branching relationship with A relationship that holds between two material entities in a system of connected structures, where the branching relationship holds based on properties of the connecting network. NMDCO_relaxed.owl RO:0002253 biolink:NamedThing has connecting branch inverse of connecting branch of NMDCO_relaxed.owl https://github.com/obophenotype/uberon/issues/2212 biolink:NamedThing NMDCO_relaxed.owl RO:0002255 biolink:NamedThing developmentally contributes to inverse of has developmental contribution from NMDCO_relaxed.owl RO:0002385 biolink:NamedThing has potential to developmentally contribute to x has potential to developmentrally contribute to y iff x developmentally contributes to y or x is capable of developmentally contributing to y NMDCO_relaxed.owl RO:0002256 biolink:NamedThing developmentally induced by t1 induced_by t2 if there is a process of developmental induction (GO:0031128) with t1 and t2 as interacting participants. t2 causes t1 to change its fate from a precursor material anatomical entity type T to T', where T' develops_from T NMDCO_relaxed.owl RO:0002257 biolink:NamedThing developmentally induces Inverse of developmentally induced by NMDCO_relaxed.owl RO:0002386 biolink:NamedThing has potential to developmentally induce x has potential to developmentally induce y iff x developmentally induces y or x is capable of developmentally inducing y NMDCO_relaxed.owl RO:0002324 biolink:NamedThing developmentally related to A relationship that holds between entities participating in some developmental process (GO:0032502) NMDCO_relaxed.owl RO:0002260 biolink:NamedThing has biological role c has-biological-role r iff c has-role r and r is a biological role (CHEBI:24432) NMDCO_relaxed.owl RO:0002261 biolink:NamedThing has application role c has-application-role r iff c has-role r and r is an application role (CHEBI:33232) NMDCO_relaxed.owl RO:0002262 biolink:NamedThing has chemical role c has-chemical-role r iff c has-role r and r is a chemical role (CHEBI:51086) NMDCO_relaxed.owl RO:0002263 biolink:NamedThing acts upstream of c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes. NMDCO_relaxed.owl RO:0002264 biolink:NamedThing acts upstream of or within c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process. NMDCO_relaxed.owl http://wiki.geneontology.org/index.php/Acts_upstream_of biolink:NamedThing NMDCO_relaxed.owl http://wiki.geneontology.org/index.php/Acts_upstream_of_or_within biolink:NamedThing NMDCO_relaxed.owl RO:0002285 biolink:NamedThing developmentally replaces x developmentally replaces y if and only if there is some developmental process that causes x to move or to cease to exist, and for the site that was occupied by x to become occupied by y, where y either comes into existence in this site or moves to this site from somewhere else NMDCO_relaxed.owl RO:0002384 biolink:NamedThing has developmental potential involving x has developmental potential involving y iff x is capable of a developmental process with output y. y may be the successor of x, or may be a different structure in the vicinity (as for example in the case of developmental induction). NMDCO_relaxed.owl RO:0002287 biolink:NamedThing part of developmental precursor of NMDCO_relaxed.owl RO:0002291 biolink:NamedThing ubiquitously expressed in x is ubiquitously expressed in y if and only if x is expressed in y, and the majority of cells in y express x NMDCO_relaxed.owl RO:0002293 biolink:NamedThing ubiquitously expresses inverse of ubiquiotously expressed in NMDCO_relaxed.owl RO:0002295 biolink:NamedThing results in developmental progression of p results in the developmental progression of s iff p is a developmental process and s is an anatomical entity and p causes s to undergo a change in state at some point along its natural developmental cycle (this cycle starts with its formation, through the mature structure, and ends with its loss). NMDCO_relaxed.owl http://wiki.geneontology.org/index.php/Ontology_extensions biolink:NamedThing NMDCO_relaxed.owl RO:0002296 biolink:NamedThing results in development of p 'results in development of' c if and only if p is a developmental process and p results in the state of c changing from its initial state as a primordium or anlage through its mature state and to its final state. NMDCO_relaxed.owl RO:0040036 biolink:NamedThing results in changes to anatomical or cellular structure p has anatomical participant c iff p has participant c, and c is an anatomical entity NMDCO_relaxed.owl RO:0002297 biolink:NamedThing results in formation of NMDCO_relaxed.owl RO:0002354 biolink:NamedThing formed as result of NMDCO_relaxed.owl RO:0002298 biolink:NamedThing results in morphogenesis of The relationship that links an entity with the process that results in the formation and shaping of that entity over time from an immature to a mature state. NMDCO_relaxed.owl RO:0002299 biolink:NamedThing results in maturation of The relationship that links an entity with a process that results in the progression of the entity over time that is independent of changes in it's shape and results in an end point state of that entity. NMDCO_relaxed.owl RO:0002300 biolink:NamedThing results in disappearance of NMDCO_relaxed.owl RO:0002552 biolink:NamedThing results in ending of p results in the end of s if p results in a change of state in s whereby s either ceases to exist, or s becomes functionally impaired or s has its fate committed such that it is put on a path to be degraded. NMDCO_relaxed.owl RO:0002301 biolink:NamedThing results in developmental regression of NMDCO_relaxed.owl RO:0002302 biolink:NamedThing is treated by substance Inverse of 'is substance that treats' NMDCO_relaxed.owl RO:0002606 biolink:NamedThing is substance that treats c is a substance that treats d if c is a material entity (such as a small molecule or compound) and d is a pathological process, phenotype or disease, and c is capable of some activity that negative regulates or decreases the magnitude of d. NMDCO_relaxed.owl RO:0002303 biolink:NamedThing has habitat x 'has habitat' y if and only if: x is an organism, y is a habitat, and y can sustain and allow the growth of a population of xs. NMDCO_relaxed.owl RO:0002321 biolink:NamedThing ecologically related to A relationship that is mediated in some way by the environment or environmental feature (ENVO:00002297) NMDCO_relaxed.owl IAO:0000428 biolink:NamedThing requires discussion A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues. NMDCO_relaxed.owl ORCID:0000-0002-4366-3088 biolink:NamedThing Pier Luigi Buttigieg researcher NMDCO_relaxed.owl RO:0004047 biolink:NamedThing causally upstream of or within, positive effect NMDCO_relaxed.owl https://wiki.geneontology.org/Causally_upstream_of,_positive_effect biolink:NamedThing NMDCO_relaxed.owl RO:0004046 biolink:NamedThing causally upstream of or within, negative effect NMDCO_relaxed.owl https://wiki.geneontology.org/Causally_upstream_of,_negative_effect biolink:NamedThing NMDCO_relaxed.owl ORCID:0000-0001-6996-0040 biolink:NamedThing Austin Meier Researcher NMDCO_relaxed.owl ORCID:0000-0002-8461-9745 biolink:NamedThing Marie-Angélique Laporte researcher NMDCO_relaxed.owl RO:0002312 biolink:NamedThing evolutionary variant of NMDCO_relaxed.owl RO:0002337 biolink:NamedThing related via localization to A relationship that holds via some process of localization NMDCO_relaxed.owl RO:0002502 biolink:NamedThing depends on NMDCO_relaxed.owl RO:0002315 biolink:NamedThing results in acquisition of features of The relationship that links a specified entity with the process that results in an unspecified entity acquiring the features and characteristics of the specified entity NMDCO_relaxed.owl RO:0002322 biolink:NamedThing confers advantage in NMDCO_relaxed.owl RO:0002325 biolink:NamedThing colocalizes with a colocalizes_with b if and only if a is transiently or peripherally associated with b[GO]. NMDCO_relaxed.owl RO:0002326 biolink:NamedThing contributes to NMDCO_relaxed.owl RO:0002329 biolink:NamedThing part of structure that is capable of this relation holds between c and p when c is part of some c', and c' is capable of p. NMDCO_relaxed.owl RO:0002327 biolink:NamedThing enables c enables p iff c is capable of p and c acts to execute p. NMDCO_relaxed.owl RO:0002333 biolink:NamedThing enabled by inverse of enables NMDCO_relaxed.owl RO:0002331 biolink:NamedThing involved in c involved_in p if and only if c enables some process p', and p' is part of p NMDCO_relaxed.owl RO:0002431 biolink:NamedThing involved in or involved in regulation of c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p NMDCO_relaxed.owl http://wiki.geneontology.org/index.php/Involved_in biolink:NamedThing NMDCO_relaxed.owl RO:0002332 biolink:NamedThing regulates levels of p regulates levels of c if p regulates some amount (PATO:0000070) of c NMDCO_relaxed.owl RO:0002427 biolink:NamedThing causally downstream of or within inverse of causally upstream of or within NMDCO_relaxed.owl RO:0002338 biolink:NamedThing has target start location This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from some initial location l to some destination. NMDCO_relaxed.owl RO:0002344 biolink:NamedThing results in transport to from or in NMDCO_relaxed.owl RO:0002339 biolink:NamedThing has target end location This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from a an initial location to some destination l. NMDCO_relaxed.owl RO:0002340 biolink:NamedThing imports Holds between p and c when p is a transportation or localization process and the outcome of this process is to move c to a destination that is part of some s, where the start location of c is part of the region that surrounds s. NMDCO_relaxed.owl RO:0002341 biolink:NamedThing results in transport along Holds between p and l when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that is aligned_with l NMDCO_relaxed.owl RO:0002342 biolink:NamedThing results in transport across Holds between p and m when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that crosses m. NMDCO_relaxed.owl RO:0002343 biolink:NamedThing results in growth of NMDCO_relaxed.owl RO:0002345 biolink:NamedThing exports Holds between p and c when p is a transportation or localization process and the outcome of this process is to move c to a destination that is part of some s, where the end location of c is part of the region that surrounds s. NMDCO_relaxed.owl RO:0002348 biolink:NamedThing results in commitment to p 'results in commitment to' c if and only if p is a developmental process and c is a cell and p results in the state of c changing such that is can only develop into a single cell type. NMDCO_relaxed.owl RO:0002349 biolink:NamedThing results in determination of p 'results in determination of' c if and only if p is a developmental process and c is a cell and p results in the state of c changing to be determined. Once a cell becomes determined, it becomes committed to differentiate down a particular pathway regardless of its environment. NMDCO_relaxed.owl RO:0002350 biolink:NamedThing member of is member of is a mereological relation between a item and a collection. NMDCO_relaxed.owl RO:0002351 biolink:NamedThing has member has member is a mereological relation between a collection and an item. NMDCO_relaxed.owl RO:0002355 biolink:NamedThing results in structural organization of A relationship between a process and an anatomical entity such that the process contributes to the act of creating the structural organization of the anatomical entity. NMDCO_relaxed.owl RO:0002356 biolink:NamedThing results in specification of The relationship linking a cell and its participation in a process that results in the fate of the cell being specified. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. NMDCO_relaxed.owl RO:0002357 biolink:NamedThing results in developmental induction of p results in developmental induction of c if and only if p is a collection of cell-cell signaling processes that signal to a neighbouring tissue that is the precursor of the mature c, where the signaling results in the commitment to cell types necessary for the formation of c. NMDCO_relaxed.owl RO:0002360 biolink:NamedThing has dendrite location NMDCO_relaxed.owl RO:0002371 biolink:NamedThing attached to a is attached to b if and only if a and b are discrete objects or object parts, and there are physical connections between a and b such that a force pulling a will move b, or a force pulling b will move a NMDCO_relaxed.owl RO:0002372 biolink:NamedThing has muscle origin m has_muscle_origin s iff m is attached_to s, and it is the case that when m contracts, s does not move. The site of the origin tends to be more proximal and have greater mass than what the other end attaches to. NMDCO_relaxed.owl http://dbpedia.org/property/origin biolink:NamedThing NMDCO_relaxed.owl RO:0002373 biolink:NamedThing has muscle insertion m has_muscle_insertion s iff m is attaches_to s, and it is the case that when m contracts, s moves. Insertions are usually connections of muscle via tendon to bone. NMDCO_relaxed.owl http://dbpedia.org/property/insertion biolink:NamedThing NMDCO_relaxed.owl RO:0002374 biolink:NamedThing derived from ancestral fusion of x has_fused_element y iff: there exists some z : x has_part z, z homologous_to y, and y is a distinct element, the boundary between x and z is largely fiat NMDCO_relaxed.owl OBO:ro/docs/branching_part_of.png biolink:NamedThing NMDCO_relaxed.owl RO:0002376 biolink:NamedThing tributary of x tributary_of y if and only if x a channel for the flow of a substance into y, where y is larger than x. If x and y are hydrographic features, then y is the main stem of a river, or a lake or bay, but not the sea or ocean. If x and y are anatomical, then y is a vein. NMDCO_relaxed.owl http://dbpedia.org/ontology/drainsTo biolink:NamedThing NMDCO_relaxed.owl RO:0002377 biolink:NamedThing distributary of x distributary_of y if and only if x is capable of channeling the flow of a substance to y, where y channels less of the substance than x NMDCO_relaxed.owl RO:0002378 biolink:NamedThing anabranch of x anabranch_of y if x is a distributary of y (i.e. it channels a from a larger flow from y) and x ultimately channels the flow back into y. NMDCO_relaxed.owl RO:0002382 biolink:NamedThing proper distributary of x proper_distributary_of y iff x distributary_of y and x does not flow back into y NMDCO_relaxed.owl RO:0002383 biolink:NamedThing proper tributary of x proper_tributary_of y iff x tributary_of y and x does not originate from y NMDCO_relaxed.owl RO:0002379 biolink:NamedThing spatially coextensive with x spatially_coextensive_with y if and inly if x and y have the same location NMDCO_relaxed.owl RO:0002380 biolink:NamedThing branching part of x is a branching part of y if and only if x is part of y and x is connected directly or indirectly to the main stem of y NMDCO_relaxed.owl RO:0002569 biolink:NamedThing has branching part inverse of branching part of NMDCO_relaxed.owl RO:0002381 biolink:NamedThing main stem of x main_stem_of y if y is a branching structure and x is a channel that traces a linear path through y, such that x has higher capacity than any other such path. NMDCO_relaxed.owl RO:0002400 biolink:NamedThing has direct input p has direct input c iff c is a participant in p, c is present at the start of p, and the state of c is modified during p. NMDCO_relaxed.owl RO:0002404 biolink:NamedThing causally downstream of inverse of upstream of NMDCO_relaxed.owl RO:0002405 biolink:NamedThing immediately causally downstream of NMDCO_relaxed.owl RO:0002412 biolink:NamedThing immediately causally upstream of p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q. NMDCO_relaxed.owl RO:0002407 biolink:NamedThing indirectly positively regulates p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q. NMDCO_relaxed.owl RO:0012012 biolink:NamedThing indirectly regulates p indirectly regulates q iff p is indirectly causally upstream of q and p regulates q. NMDCO_relaxed.owl RO:0002409 biolink:NamedThing indirectly negatively regulates p indirectly negatively regulates q iff p is indirectly causally upstream of q and p negatively regulates q. NMDCO_relaxed.owl RO:0002413 biolink:NamedThing provides input for p provides input for q iff p is immediately causally upstream of q, and there exists some c such that p has_output c and q has_input c. NMDCO_relaxed.owl RO:0002414 biolink:NamedThing transitively provides input for transitive form of directly_provides_input_for NMDCO_relaxed.owl RO:0002501 biolink:NamedThing causal relation between processes p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q. NMDCO_relaxed.owl RO:0002424 biolink:NamedThing differs in NMDCO_relaxed.owl RO:0002425 biolink:NamedThing differs in attribute of NMDCO_relaxed.owl RO:0002426 biolink:NamedThing differs in attribute NMDCO_relaxed.owl RO:0002428 biolink:NamedThing involved in regulation of c involved in regulation of p if c is involved in some p' and p' regulates some p NMDCO_relaxed.owl RO:0002429 biolink:NamedThing involved in positive regulation of c involved in regulation of p if c is involved in some p' and p' positively regulates some p NMDCO_relaxed.owl RO:0002430 biolink:NamedThing involved in negative regulation of c involved in regulation of p if c is involved in some p' and p' negatively regulates some p NMDCO_relaxed.owl RO:0002432 biolink:NamedThing is active in c executes activity in d if and only if c enables p and p occurs_in d. Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure. NMDCO_relaxed.owl RO:0002433 biolink:NamedThing contributes to morphology of p contributes to morphology of w if and only if a change in the morphology of p entails a change in the morphology of w. Examples: every skull contributes to morphology of the head which it is a part of. Counter-example: nuclei do not generally contribute to the morphology of the cell they are part of, as they are buffered by cytoplasm. NMDCO_relaxed.owl RO:0002434 biolink:NamedThing interacts with A relationship that holds between two entities in which the processes executed by the two entities are causally connected. NMDCO_relaxed.owl RO:0002435 biolink:NamedThing genetically interacts with NMDCO_relaxed.owl ECO:0000316 biolink:NamedThing NMDCO_relaxed.owl RO:0002436 biolink:NamedThing molecularly interacts with An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other. NMDCO_relaxed.owl ECO:0000353 biolink:NamedThing NMDCO_relaxed.owl RO:0002437 biolink:NamedThing biotically interacts with An interaction relationship in which at least one of the partners is an organism and the other is either an organism or an abiotic entity with which the organism interacts. NMDCO_relaxed.owl DOI:10.1016/j.ecoinf.2014.08.005 biolink:NamedThing NMDCO_relaxed.owl RO:0002438 biolink:NamedThing trophically interacts with An interaction relationship in which the partners are related via a feeding relationship. NMDCO_relaxed.owl RO:0002574 biolink:NamedThing participates in a biotic-biotic interaction with NMDCO_relaxed.owl RO:0002439 biolink:NamedThing preys on An interaction relationship involving a predation process, where the subject kills the target in order to eat it or to feed to siblings, offspring or group members NMDCO_relaxed.owl RO:0002458 biolink:NamedThing preyed upon by inverse of preys on NMDCO_relaxed.owl ORCID:0000-0001-7134-3324 biolink:NamedThing NMDCO_relaxed.owl ORCID:0000-0003-3138-4118 biolink:NamedThing Jorrit Poelen software/data engineer NMDCO_relaxed.owl RO:0002440 biolink:NamedThing symbiotically interacts with A biotic interaction in which the two organisms live together in more or less intimate association. NMDCO_relaxed.owl RO:0002441 biolink:NamedThing commensually interacts with An interaction relationship between two organisms living together in more or less intimate association in a relationship in which one benefits and the other is unaffected (GO). NMDCO_relaxed.owl RO:0002442 biolink:NamedThing mutualistically interacts with An interaction relationship between two organisms living together in more or less intimate association in a relationship in which both organisms benefit from each other (GO). NMDCO_relaxed.owl RO:0002443 biolink:NamedThing interacts with via parasite-host interaction An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO). NMDCO_relaxed.owl RO:0002454 biolink:NamedThing has host X 'has host' y if and only if: x is an organism, y is an organism, and x can live on the surface of or within the body of y NMDCO_relaxed.owl RO:0002453 biolink:NamedThing host of NMDCO_relaxed.owl RO:0002446 biolink:NamedThing participates in a abiotic-biotic interaction with A biotic interaction relationship in which one partner is an organism and the other partner is inorganic. For example, the relationship between a sponge and the substrate to which is it anchored. NMDCO_relaxed.owl RO:0002447 biolink:NamedThing phosphorylates NMDCO_relaxed.owl RO:0002448 biolink:NamedThing directly regulates activity of The entity A, immediately upstream of the entity B, has an activity that regulates an activity performed by B. For example, A and B may be gene products and binding of B by A regulates the kinase activity of B. A and B can be physically interacting but not necessarily. Immediately upstream means there are no intermediate entity between A and B. NMDCO_relaxed.owl RO:0011002 biolink:NamedThing regulates activity of The entity A has an activity that regulates an activity of the entity B. For example, A and B are gene products where the catalytic activity of A regulates the kinase activity of B. NMDCO_relaxed.owl ORCID:0000-0003-4639-4431 biolink:NamedThing NMDCO_relaxed.owl RO:0002449 biolink:NamedThing directly negatively regulates activity of The entity A, immediately upstream of the entity B, has an activity that negatively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B. NMDCO_relaxed.owl RO:0002450 biolink:NamedThing directly positively regulates activity of The entity A, immediately upstream of the entity B, has an activity that positively regulates an activity performed by B. For example, A and B may be gene products and binding of B by A positively regulates the kinase activity of B. NMDCO_relaxed.owl RO:0002451 biolink:NamedThing transmitted by A relationship that holds between a disease and organism NMDCO_relaxed.owl RO:0002452 biolink:NamedThing has symptom A relation that holds between a disease or an organism and a phenotype NMDCO_relaxed.owl RO:0002455 biolink:NamedThing pollinates NMDCO_relaxed.owl RO:0002456 biolink:NamedThing pollinated by NMDCO_relaxed.owl RO:0002457 biolink:NamedThing acquires nutrients from NMDCO_relaxed.owl RO:0002469 biolink:NamedThing provides nutrients for NMDCO_relaxed.owl RO:0002459 biolink:NamedThing is vector for NMDCO_relaxed.owl RO:0002460 biolink:NamedThing has vector NMDCO_relaxed.owl RO:0002461 biolink:NamedThing partner in NMDCO_relaxed.owl RO:0002462 biolink:NamedThing subject participant in NMDCO_relaxed.owl RO:0002463 biolink:NamedThing target participant in NMDCO_relaxed.owl RO:0002464 biolink:NamedThing helper property (not for use in curation) NMDCO_relaxed.owl RO:0002465 biolink:NamedThing is symbiosis NMDCO_relaxed.owl RO:0002563 biolink:NamedThing interaction relation helper property NMDCO_relaxed.owl RO:0002466 biolink:NamedThing is commensalism NMDCO_relaxed.owl RO:0002467 biolink:NamedThing is mutualism NMDCO_relaxed.owl RO:0002468 biolink:NamedThing is parasitism NMDCO_relaxed.owl RO:0002470 biolink:NamedThing eats NMDCO_relaxed.owl RO:0002471 biolink:NamedThing is eaten by NMDCO_relaxed.owl RO:0002472 biolink:NamedThing is evidence for A relationship between a piece of evidence a and some entity b, where b is an information content entity, material entity or process, and the a supports either the existence of b, or the truth value of b. NMDCO_relaxed.owl RO:0002616 biolink:NamedThing related via evidence or inference to NMDCO_relaxed.owl RO:0002558 biolink:NamedThing has evidence inverse of is evidence for NMDCO_relaxed.owl RO:0002473 biolink:NamedThing composed primarily of x composed_primarily_of y if and only if more than half of the mass of x is made from y or units of the same type as y. NMDCO_relaxed.owl RO:0002476 biolink:NamedThing child nucleus of c is a child nucleus of d if and only if c and d are both nuclei and parts of cells c' and d', where c' is derived from d' by mitosis and the genetic material in c is a copy of the generic material in d NMDCO_relaxed.owl RO:0002477 biolink:NamedThing child nucleus of in hermaphrodite A child nucleus relationship in which the cells are part of a hermaphroditic organism NMDCO_relaxed.owl RO:0002478 biolink:NamedThing child nucleus of in male A child nucleus relationship in which the cells are part of a male organism NMDCO_relaxed.owl RO:0002480 biolink:NamedThing ubiquitinates An interaction relation between x and y in which x catalyzes a reaction in which one or more ubiquitin groups are added to y NMDCO_relaxed.owl RO:0002481 biolink:NamedThing is kinase activity NMDCO_relaxed.owl RO:0002564 biolink:NamedThing molecular interaction relation helper property NMDCO_relaxed.owl RO:0002482 biolink:NamedThing is ubiquitination NMDCO_relaxed.owl RO:0002487 biolink:NamedThing relation between physical entity and a process or stage NMDCO_relaxed.owl RO:0002488 biolink:NamedThing existence starts during x existence starts during y if and only if the time point at which x starts is after or equivalent to the time point at which y starts and before or equivalent to the time point at which y ends. Formally: x existence starts during y iff α(x) >= α(y) & α(x) <= ω(y). NMDCO_relaxed.owl RO:0002490 biolink:NamedThing existence overlaps x existence overlaps y if and only if either (a) the start of x is part of y or (b) the end of x is part of y. Formally: x existence starts and ends during y iff (α(x) >= α(y) & α(x) <= ω(y)) OR (ω(x) <= ω(y) & ω(x) >= α(y)) NMDCO_relaxed.owl RO:0002496 biolink:NamedThing existence starts during or after x existence starts during or after y if and only if the time point at which x starts is after or equivalent to the time point at which y starts. Formally: x existence starts during or after y iff α (x) >= α (y). NMDCO_relaxed.owl RO:0002489 biolink:NamedThing existence starts with x starts ends with y if and only if the time point at which x starts is equivalent to the time point at which y starts. Formally: x existence starts with y iff α(x) = α(y). NMDCO_relaxed.owl RO:0002491 biolink:NamedThing existence starts and ends during x exists during y if and only if: 1) the time point at which x begins to exist is after or equal to the time point at which y begins and 2) the time point at which x ceases to exist is before or equal to the point at which y ends. Formally: x existence starts and ends during y iff α(x) >= α(y) & α(x) <= ω(y) & ω(x) <= ω(y) & ω(x) >= α(y) NMDCO_relaxed.owl RO:0002492 biolink:NamedThing existence ends during Relation between continuant c and occurrent s, such that every instance of c ceases to exist during some s, if it does not die prematurely.|x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y). NMDCO_relaxed.owl RO:0002497 biolink:NamedThing existence ends during or before x existence ends during or before y if and only if the time point at which x ends is before or equivalent to the time point at which y ends. NMDCO_relaxed.owl RO:0002493 biolink:NamedThing existence ends with x existence ends with y if and only if the time point at which x ends is equivalent to the time point at which y ends. Formally: x existence ends with y iff ω(x) = ω(y). NMDCO_relaxed.owl RO:0002494 biolink:NamedThing transformation of x transformation of y if x is the immediate transformation of y, or is linked to y through a chain of transformation relationships NMDCO_relaxed.owl RO:0002495 biolink:NamedThing immediate transformation of x immediate transformation of y iff x immediately succeeds y temporally at a time boundary t, and all of the matter present in x at t is present in y at t, and all the matter in y at t is present in x at t NMDCO_relaxed.owl RO:0002595 biolink:NamedThing causal relation between material entity and a process A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity. NMDCO_relaxed.owl RO:0002608 biolink:NamedThing process has causal agent Inverse of 'causal agent in process' NMDCO_relaxed.owl BFO:0000169 biolink:NamedThing NMDCO_relaxed.owl RO:0002503 biolink:NamedThing towards q towards e2 if and only if q is a relational quality such that q inheres-in some e, and e != e2 and q is dependent on e2 NMDCO_relaxed.owl RO:0002505 biolink:NamedThing has intermediate p has intermediate c if and only if p has parts p1, p2 and p1 has output c, and p2 has input c NMDCO_relaxed.owl RO:0002506 biolink:NamedThing causal relation between entities NMDCO_relaxed.owl RO:0002507 biolink:NamedThing determined by s determined by f if and only if s is a type of system, and f is a material entity that is part of s, such that f exerts a strong causal influence on the functioning of s, and the removal of f would cause the collapse of s. NMDCO_relaxed.owl RO:0002509 biolink:NamedThing determined by part of s 'determined by part of' w if and only if there exists some f such that (1) s 'determined by' f and (2) f part_of w, or f=w. NMDCO_relaxed.owl RO:0002559 biolink:NamedThing causally influenced by NMDCO_relaxed.owl RO:0002508 biolink:NamedThing determines inverse of determined by NMDCO_relaxed.owl PMID:24330602 biolink:NamedThing NMDCO_relaxed.owl RO:0002566 biolink:NamedThing causally influences The entity or characteristic A is causally upstream of the entity or characteristic B, A having an effect on B. An entity corresponds to any biological type of entity as long as a mass is measurable. A characteristic corresponds to a particular specificity of an entity (e.g., phenotype, shape, size). NMDCO_relaxed.owl RO:0002510 biolink:NamedThing transcribed from x is transcribed from y if and only if x is synthesized from template y NMDCO_relaxed.owl RO:0002511 biolink:NamedThing transcribed to inverse of transcribed from NMDCO_relaxed.owl RO:0002512 biolink:NamedThing ribosomal translation of x is the ribosomal translation of y if and only if a ribosome reads x through a series of triplet codon-amino acid adaptor activities (GO:0030533) and produces y NMDCO_relaxed.owl RO:0002513 biolink:NamedThing ribosomally translates to inverse of ribosomal translation of NMDCO_relaxed.owl RO:0002514 biolink:NamedThing sequentially related to A relation that holds between two entities that have the property of being sequences or having sequences. NMDCO_relaxed.owl http://biorxiv.org/content/early/2014/06/27/006650.abstract biolink:NamedThing NMDCO_relaxed.owl RO:0002515 biolink:NamedThing sequentially adjacent to x is sequentially adjacent to y iff x and y do not overlap and if there are no base units intervening between x and y NMDCO_relaxed.owl RO:0002527 biolink:NamedThing does not overlap sequence of x does not overlap the sequence of y if and only if there is no z such that x has a subsequence z and z is a subsequence of y. NMDCO_relaxed.owl RO:0002516 biolink:NamedThing has start sequence x has start sequence y if the start of x is identical to the start of y, and x has y as a subsequence NMDCO_relaxed.owl RO:0002524 biolink:NamedThing has subsequence x has subsequence y iff all of the sequence parts of y are sequence parts of x NMDCO_relaxed.owl RO:0002517 biolink:NamedThing is start sequence of inverse of has start sequence NMDCO_relaxed.owl RO:0002525 biolink:NamedThing is subsequence of inverse of has subsequence NMDCO_relaxed.owl RO:0002518 biolink:NamedThing has end sequence x has end sequence y if the end of x is identical to the end of y, and x has y as a subsequence NMDCO_relaxed.owl RO:0002519 biolink:NamedThing is end sequence of inverse of has end sequence NMDCO_relaxed.owl RO:0002520 biolink:NamedThing is consecutive sequence of x is a consecutive sequence of y iff x has subsequence y, and all the parts of x are made of zero or more repetitions of y or sequences as the same type as y. NMDCO_relaxed.owl RO:0002521 biolink:NamedThing is sequentially aligned with x is sequentially aligned with if a significant portion bases of x and y correspond in terms of their base type and their relative ordering NMDCO_relaxed.owl RO:0002522 biolink:NamedThing bounds sequence of x bounds the sequence of y iff the upstream-most part of x is upstream of or coincident with the upstream-most part of y, and the downstream-most part of x is downstream of or coincident with the downstream-most part of y NMDCO_relaxed.owl RO:0002523 biolink:NamedThing is bound by sequence of inverse of bounds sequence of NMDCO_relaxed.owl RO:0002526 biolink:NamedThing overlaps sequence of x overlaps the sequence of y if and only if x has a subsequence z and z is a subsequence of y. NMDCO_relaxed.owl RO:0002528 biolink:NamedThing is upstream of sequence of inverse of downstream of sequence of NMDCO_relaxed.owl RO:0002529 biolink:NamedThing is downstream of sequence of x is downstream of the sequence of y iff either (1) x and y have sequence units, and all units of x are downstream of all units of y, or (2) x and y are sequence units, and x is either immediately downstream of y, or transitively downstream of y. NMDCO_relaxed.owl RO:0002530 biolink:NamedThing is immediately downstream of sequence of x is immediately downstream of the sequence of y iff either (1) x and y have sequence units, and all units of x are downstream of all units of y, and x is sequentially adjacent to y, or (2) x and y are sequence units, in which case the immediately downstream relation is primitive and defined by context: for DNA bases, y would be adjacent and 5' to y NMDCO_relaxed.owl RO:0002531 biolink:NamedThing is immediately upstream of sequence of inverse of immediately downstream of NMDCO_relaxed.owl RO:0002551 biolink:NamedThing has skeleton A relation between a segment or subdivision of an organism and the maximal subdivision of material entities that provides structural support for that segment or subdivision. NMDCO_relaxed.owl RO:0002576 biolink:NamedThing skeleton of inverse of has skeleton NMDCO_relaxed.owl RO:0002553 biolink:NamedThing hyperparasite of x is a hyperparasite of y iff x is a parasite of a parasite of the target organism y NMDCO_relaxed.owl RO:0002554 biolink:NamedThing hyperparasitized by inverse of hyperparasite of NMDCO_relaxed.owl RO:0002555 biolink:NamedThing allelopath of NMDCO_relaxed.owl RO:0002556 biolink:NamedThing pathogen of NMDCO_relaxed.owl RO:0002557 biolink:NamedThing has pathogen NMDCO_relaxed.owl PMID:25052702 biolink:NamedThing NMDCO_relaxed.owl http://ontologydesignpatterns.org/wiki/Submissions:N-Ary_Relation_Pattern_%28OWL_2%29 biolink:NamedThing NMDCO_relaxed.owl RO:0002565 biolink:NamedThing results in movement of Holds between p and c when p is locomotion process and the outcome of this process is the change of location of c NMDCO_relaxed.owl RO:0002568 biolink:NamedThing has muscle antagonist m1 has_muscle_antagonist m2 iff m1 has_muscle_insertion s, m2 has_muscle_insection s, m1 acts in opposition to m2, and m2 is responsible for returning the structure to its initial position. NMDCO_relaxed.owl RO:0002570 biolink:NamedThing conduit for x is a conduit for y iff y overlaps through the lumen_of of x, and y has parts on either side of the lumen of x. NMDCO_relaxed.owl RO:0002571 biolink:NamedThing lumen of x lumen_of y iff x is the space or substance that is part of y and does not cross any of the inner membranes or boundaries of y that is maximal with respect to the volume of the convex hull. NMDCO_relaxed.owl RO:0002572 biolink:NamedThing luminal space of s is luminal space of x iff s is lumen_of x and s is an immaterial entity NMDCO_relaxed.owl RO:0002573 biolink:NamedThing has modifier A relation that holds between an attribute or a qualifier and another attribute. NMDCO_relaxed.owl RO:0002583 biolink:NamedThing existence starts at end of holds between x and y if and only if the time point at which x starts is equivalent to the time point at which y ends. Formally: iff α(x) = ω(y). NMDCO_relaxed.owl RO:0002584 biolink:NamedThing has part structure that is capable of s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p NMDCO_relaxed.owl RO:0002585 biolink:NamedThing results in closure of NMDCO_relaxed.owl RO:0002586 biolink:NamedThing results in breakdown of p results in breakdown of c if and only if the execution of p leads to c no longer being present at the end of p NMDCO_relaxed.owl RO:0002587 biolink:NamedThing results in synthesis of NMDCO_relaxed.owl RO:0002588 biolink:NamedThing results in assembly of NMDCO_relaxed.owl RO:0002592 biolink:NamedThing results in organization of p results in organization of c iff p results in the assembly, arrangement of constituent parts, or disassembly of c NMDCO_relaxed.owl RO:0002589 biolink:NamedThing results in catabolism of p results in catabolism of c if and only if p is a catabolic process, and the execution of p results in c being broken into smaller parts with energy being released. NMDCO_relaxed.owl RO:0002590 biolink:NamedThing results in disassembly of NMDCO_relaxed.owl RO:0002591 biolink:NamedThing results in remodeling of NMDCO_relaxed.owl RO:0002593 biolink:NamedThing existence ends at start of holds between x and y if and only if the time point at which x ends is equivalent to the time point at which y starts. Formally: iff ω(x) = α(y). NMDCO_relaxed.owl RO:0002596 biolink:NamedThing capable of regulating Holds between c and p if and only if c is capable of some activity a, and a regulates p. NMDCO_relaxed.owl RO:0002597 biolink:NamedThing capable of negatively regulating Holds between c and p if and only if c is capable of some activity a, and a negatively regulates p. NMDCO_relaxed.owl RO:0002598 biolink:NamedThing capable of positively regulating Holds between c and p if and only if c is capable of some activity a, and a positively regulates p. NMDCO_relaxed.owl RO:0002599 biolink:NamedThing capable of inhibiting or preventing pathological process Holds between a material entity c and a pathological process p if and only if c is capable of some activity a, where a inhibits p. NMDCO_relaxed.owl RO:0002600 biolink:NamedThing capable of upregulating or causing pathological process Holds between a material entity c and a pathological process p if and only if c is capable of some activity a, where a negatively regulates p. NMDCO_relaxed.owl https://code.google.com/p/obo-relations/issues/detail?id=46 biolink:NamedThing NMDCO_relaxed.owl RO:0002607 biolink:NamedThing is marker for c is marker for d iff the presence or occurrence of d is correlated with the presence of occurrence of c, and the observation of c is used to infer the presence or occurrence of d. Note that this does not imply that c and d are in a direct causal relationship, as it may be the case that there is a third entity e that stands in a direct causal relationship with c and d. NMDCO_relaxed.owl RO:0002610 biolink:NamedThing correlated with A relationship that holds between two entities, where the entities exhibit a statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes. NMDCO_relaxed.owl RO:0002614 biolink:NamedThing is evidence with support from A relationship between a piece of evidence and an entity that plays a role in supporting that evidence. NMDCO_relaxed.owl RO:0002615 biolink:NamedThing has model Inverse of is-model-of NMDCO_relaxed.owl RO:0003301 biolink:NamedThing has role in modeling A relation between a biological, experimental, or computational artifact and an entity it is used to study, in virtue of its replicating or approximating features of the studied entity. NMDCO_relaxed.owl RO:0002618 biolink:NamedThing visits NMDCO_relaxed.owl RO:0002619 biolink:NamedThing visited by NMDCO_relaxed.owl RO:0002622 biolink:NamedThing visits flowers of NMDCO_relaxed.owl RO:0002623 biolink:NamedThing has flowers visited by NMDCO_relaxed.owl RO:0002624 biolink:NamedThing lays eggs in NMDCO_relaxed.owl RO:0002625 biolink:NamedThing has eggs laid in by NMDCO_relaxed.owl RO:0002626 biolink:NamedThing kills NMDCO_relaxed.owl RO:0002627 biolink:NamedThing is killed by NMDCO_relaxed.owl RO:0002632 biolink:NamedThing ectoparasite of A sub-relation of parasite-of in which the parasite lives on or in the integumental system of the host NMDCO_relaxed.owl RO:0002633 biolink:NamedThing has ectoparasite inverse of ectoparasite of NMDCO_relaxed.owl https://en.wikipedia.org/wiki/Parasitism#Types biolink:NamedThing NMDCO_relaxed.owl RO:0002634 biolink:NamedThing endoparasite of NMDCO_relaxed.owl RO:0002635 biolink:NamedThing has endoparasite NMDCO_relaxed.owl RO:0002636 biolink:NamedThing mesoparasite of A sub-relation of parasite-of in which the parasite is partially an endoparasite and partially an ectoparasite NMDCO_relaxed.owl RO:0002637 biolink:NamedThing has mesoparasite inverse of mesoparasite of NMDCO_relaxed.owl RO:0002638 biolink:NamedThing intercellular endoparasite of A sub-relation of endoparasite-of in which the parasite inhabits the spaces between host cells. NMDCO_relaxed.owl RO:0002639 biolink:NamedThing has intercellular endoparasite inverse of intercellular endoparasite of NMDCO_relaxed.owl RO:0002640 biolink:NamedThing intracellular endoparasite of A sub-relation of endoparasite-of in which the parasite inhabits host cells. NMDCO_relaxed.owl RO:0002641 biolink:NamedThing has intracellular endoparasite inverse of intracellular endoparasite of NMDCO_relaxed.owl RO:0002801 biolink:NamedThing co-roosts with Two or more individuals sharing the same roost site (cave, mine, tree or tree hollow, animal burrow, leaf tent, rock crack, space in man-made structure, etc.). Individuals that are sharing a communal roost may be said to be co-roosting. The roost may be either a day roost where the individuals rest during daytime hours, or a night roost where individuals roost to feed, groom, or rest in between flights and/or foraging bouts. Communal roosting as thus defined is an umbrella term within which different specialized types -- which are not mutually exclusive -- may be recognized based on taxonomy and the temporal and spatial relationships of the individuals that are co-roosting. NMDCO_relaxed.owl RO:0008506 biolink:NamedThing ecologically co-occurs with An interaction relationship describing organisms that often occur together at the same time and space or in the same environment. NMDCO_relaxed.owl https://en.wikipedia.org/wiki/Communal_roosting biolink:NamedThing NMDCO_relaxed.owl RO:0002802 biolink:NamedThing reservoir host of A relation between a host organism and a hosted organism in which the hosted organism naturally occurs in an indefinitely maintained reservoir provided by the host. NMDCO_relaxed.owl RO:0002803 biolink:NamedThing has reservoir host inverse of reservoir host of NMDCO_relaxed.owl doi:10.3390/v13071356 biolink:NamedThing NMDCO_relaxed.owl ORCID:0000-0002-3120-4802 biolink:NamedThing NMDCO_relaxed.owl RO:0003000 biolink:NamedThing produces a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix. NMDCO_relaxed.owl RO:0003001 biolink:NamedThing produced by a produced_by b iff some process that occurs_in b has_output a. NMDCO_relaxed.owl RO:0003002 biolink:NamedThing represses expression of Holds between entity A (a transcription factor) and a nucleic acid B if and only if A down-regulates the expression of B. The nucleic acid can be a gene or an mRNA. NMDCO_relaxed.owl RO:0003003 biolink:NamedThing increases expression of Holds between entity A (a transcription factor) and nucleic acid B if and only if A up-regulates the expression of B. The nucleic acid can be a gene or mRNA. NMDCO_relaxed.owl ORCID:0000-0002-1048-5019 biolink:NamedThing NMDCO_relaxed.owl RO:0003303 biolink:NamedThing causes condition A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some causal role for the condition. NMDCO_relaxed.owl RO:0003304 biolink:NamedThing contributes to condition A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some contributing role that influences the condition. NMDCO_relaxed.owl RO:0003305 biolink:NamedThing contributes to severity of condition A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity influences the severity with which a condition manifests in an individual. NMDCO_relaxed.owl RO:0003306 biolink:NamedThing contributes to frequency of condition A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity influences the frequency of the condition in a population. NMDCO_relaxed.owl RO:0003307 biolink:NamedThing ameliorates condition A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the presence of the entity reduces or eliminates some or all aspects of the condition. NMDCO_relaxed.owl RO:0003308 biolink:NamedThing correlated with condition A relationship between an entity and a condition (phenotype or disease) with which it exhibits a statistical dependence relationship. NMDCO_relaxed.owl RO:0003309 biolink:NamedThing exacerbates condition A relationship between an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) and a condition (a phenotype or disease), where the presence of the entity worsens some or all aspects of the condition. NMDCO_relaxed.owl RO:0003310 biolink:NamedThing condition ameliorated by A relationship between a condition (a phenotype or disease) and an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) where some or all aspects of the condition are reduced or eliminated by the presence of the entity. NMDCO_relaxed.owl RO:0003311 biolink:NamedThing condition exacerbated by A relationship between a condition (a phenotype or disease) and an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) where some or all aspects of the condition are worsened by the presence of the entity. NMDCO_relaxed.owl RO:0004000 biolink:NamedThing condition has genetic basis in NMDCO_relaxed.owl RO:0004010 biolink:NamedThing is genetic basis for condition NMDCO_relaxed.owl RO:0004001 biolink:NamedThing has material basis in gain of function germline mutation in NMDCO_relaxed.owl RO:0004011 biolink:NamedThing is causal gain of function germline mutation of in Relates a gene to condition, such that a mutation in this gene in a germ cell provides a new function of the corresponding product and that is sufficient to produce the condition and that can be passed on to offspring[modified from orphanet]. NMDCO_relaxed.owl ORPHA:410295 biolink:NamedThing NMDCO_relaxed.owl ORPHA:410296 biolink:NamedThing NMDCO_relaxed.owl RO:0004002 biolink:NamedThing has material basis in loss of function germline mutation in NMDCO_relaxed.owl RO:0004012 biolink:NamedThing is causal loss of function germline mutation of in Relates a gene to condition, such that a mutation in this gene in a germ cell impairs the function of the corresponding product and that is sufficient to produce the condition and that can be passed on to offspring[modified from orphanet]. NMDCO_relaxed.owl RO:0004003 biolink:NamedThing has material basis in germline mutation in NMDCO_relaxed.owl RO:0004013 biolink:NamedThing is causal germline mutation in Relates a gene to condition, such that a mutation in this gene is sufficient to produce the condition and that can be passed on to offspring[modified from orphanet]. NMDCO_relaxed.owl ORPHA:317343 biolink:NamedThing NMDCO_relaxed.owl RO:0004004 biolink:NamedThing has material basis in somatic mutation in NMDCO_relaxed.owl RO:0004014 biolink:NamedThing is causal somatic mutation in Relates a gene to condition, such that a mutation in this gene is sufficient to produce the condition but that cannot be passed on to offspring[modified from orphanet]. NMDCO_relaxed.owl ORPHA:317344 biolink:NamedThing NMDCO_relaxed.owl RO:0004005 biolink:NamedThing has major susceptibility factor NMDCO_relaxed.owl RO:0004015 biolink:NamedThing is causal susceptibility factor for Relates a gene to condition, such that a mutation in this gene predisposes to the development of a condition and that is necessary but not sufficient to develop the condition[modified from orphanet]. NMDCO_relaxed.owl RO:0004006 biolink:NamedThing has partial material basis in germline mutation in NMDCO_relaxed.owl RO:0004016 biolink:NamedThing is causal germline mutation partially giving rise to Relates a gene to condition, such that a mutation in this gene partially contributes to the presentation of this condition[modified from orphanet]. NMDCO_relaxed.owl RO:0004007 biolink:NamedThing has primary input or output p 'has primary input ot output' c iff either (a) p 'has primary input' c or (b) p 'has primary output' c. NMDCO_relaxed.owl RO:0004008 biolink:NamedThing has primary output p has primary output c if (a) p has output c and (b) the goal of process is to modify, produce, or transform c. NMDCO_relaxed.owl RO:0004009 biolink:NamedThing has primary input p has primary input c if (a) p has input c and (b) the goal of process is to modify, consume, or transform c. NMDCO_relaxed.owl RO:0004018 biolink:NamedThing is basis for realizable NMDCO_relaxed.owl ORPHA:317345 biolink:NamedThing NMDCO_relaxed.owl ORPHA:317346 biolink:NamedThing NMDCO_relaxed.owl RO:0004017 biolink:NamedThing realizable has basis in NMDCO_relaxed.owl RO:0004019 biolink:NamedThing disease has basis in NMDCO_relaxed.owl RO:0004023 biolink:NamedThing causal relationship with disease as subject NMDCO_relaxed.owl RO:0004020 biolink:NamedThing disease has basis in dysfunction of A relation that holds between the disease and a material entity where the physical basis of the disease is a disorder of that material entity that affects its function. NMDCO_relaxed.owl RO:0004021 biolink:NamedThing disease has basis in disruption of A relation that holds between the disease and a process where the physical basis of the disease disrupts execution of a key biological process. NMDCO_relaxed.owl RO:0004022 biolink:NamedThing disease has basis in feature A relation that holds between the disease and a feature (a phenotype or other disease) where the physical basis of the disease is the feature. NMDCO_relaxed.owl RO:0040035 biolink:NamedThing disease relationship This relation groups relations between diseases and any other kind of entity. NMDCO_relaxed.owl RO:0004024 biolink:NamedThing disease causes disruption of A relationship between a disease and a process where the disease process disrupts the execution of the process. NMDCO_relaxed.owl RO:0004025 biolink:NamedThing disease causes dysfunction of NMDCO_relaxed.owl RO:0004026 biolink:NamedThing disease has location A relationship between a disease and an anatomical entity where the disease has one or more features that are located in that entity. NMDCO_relaxed.owl RO:0004027 biolink:NamedThing disease has inflammation site A relationship between a disease and an anatomical entity where the disease is triggered by an inflammatory response to stimuli occurring in the anatomical entity NMDCO_relaxed.owl RO:0004028 biolink:NamedThing realized in response to stimulus A relationship between a realizable entity R (e.g. function or disposition) and a material entity M where R is realized in response to a process that has an input stimulus of M. NMDCO_relaxed.owl RO:0004029 biolink:NamedThing disease has feature A relationship between a disease and some feature of that disease, where the feature is either a phenotype or an isolated disease. NMDCO_relaxed.owl RO:0004030 biolink:NamedThing disease arises from alteration in structure A relationship between a disease and an anatomical structure where the material basis of the disease is some pathological change in the structure. Anatomical structure includes cellular and sub-cellular entities, such as chromosome and organelles. NMDCO_relaxed.owl RO:0004031 biolink:NamedThing enables subfunction Holds between an entity and an process P where the entity enables some larger compound process, and that larger process has-part P. NMDCO_relaxed.owl RO:0004032 biolink:NamedThing acts upstream of or within, positive effect NMDCO_relaxed.owl http://wiki.geneontology.org/index.php/Acts_upstream_of_or_within,_positive_effect biolink:NamedThing NMDCO_relaxed.owl RO:0004033 biolink:NamedThing acts upstream of or within, negative effect NMDCO_relaxed.owl RO:0004034 biolink:NamedThing acts upstream of, positive effect c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive NMDCO_relaxed.owl http://wiki.geneontology.org/index.php/Acts_upstream_of,_positive_effect biolink:NamedThing NMDCO_relaxed.owl RO:0004035 biolink:NamedThing acts upstream of, negative effect c 'acts upstream of, negative effect' p if c is enables f, and f is causally upstream of p, and the direction of f is negative NMDCO_relaxed.owl http://wiki.geneontology.org/index.php/Acts_upstream_of,_negative_effect biolink:NamedThing NMDCO_relaxed.owl https://wiki.geneontology.org/Causally_upstream_of_or_within,_positive_effect biolink:NamedThing NMDCO_relaxed.owl RO:0007000 biolink:NamedThing has driver A relation between two entities, in which one of the entities is any natural or human-influenced factor that directly or indirectly causes a change in the other entity. NMDCO_relaxed.owl ORCID:0000-0001-8910-9851 biolink:NamedThing Lynn Schriml researcher, metadata, diseases, University of Maryland NMDCO_relaxed.owl https://github.com/oborel/obo-relations/issues/506 biolink:NamedThing NMDCO_relaxed.owl RO:0007001 biolink:NamedThing has disease driver A relation between an entity and a disease of a host, in which the entity is not part of the host itself, and the condition results in pathological processes. NMDCO_relaxed.owl RO:0008501 biolink:NamedThing epiphyte of An interaction relationship wherein a plant or algae is living on the outside surface of another plant. NMDCO_relaxed.owl RO:0008502 biolink:NamedThing has epiphyte inverse of epiphyte of NMDCO_relaxed.owl RO:0008503 biolink:NamedThing kleptoparasite of A sub-relation of parasite of in which a parasite steals resources from another organism, usually food or nest material NMDCO_relaxed.owl RO:0008504 biolink:NamedThing kleptoparasitized by inverse of kleptoparasite of NMDCO_relaxed.owl RO:0008505 biolink:NamedThing creates habitat for An interaction relationship wherein one organism creates a structure or environment that is lived in by another organism. NMDCO_relaxed.owl RO:0008507 biolink:NamedThing lays eggs on An interaction relationship in which organism a lays eggs on the outside surface of organism b. Organism b is neither helped nor harmed in the process of egg laying or incubation. NMDCO_relaxed.owl RO:0008508 biolink:NamedThing has eggs laid on by inverse of lays eggs on NMDCO_relaxed.owl RO:0008509 biolink:NamedThing has roost x 'has roost' y if and only if: x is an organism, y is a habitat, and y can support rest behaviors x. NMDCO_relaxed.owl ORCID:0000-0002-2908-3327 biolink:NamedThing Anne Thessen data scientist NMDCO_relaxed.owl RO:0009001 biolink:NamedThing has substance added "has substance added" is a relation existing between a (physical) entity and a substance in which the entity has had the substance added to it at some point in time. NMDCO_relaxed.owl ORCID:0000-0002-8844-9165 biolink:NamedThing NMDCO_relaxed.owl RO:0009002 biolink:NamedThing has substance removed "has substance removed" is a relation existing between two physical entities in which the first entity has had the second entity (a substance) removed from it at some point in time. NMDCO_relaxed.owl RO:0009003 biolink:NamedThing immersed in "immersed in" is a relation between a (physical) entity and a fluid substance in which the entity is wholely or substantially surrounded by the substance. NMDCO_relaxed.owl RO:0009004 biolink:NamedThing has consumer 'has consumer' is a relation between a material entity and an organism in which the former can normally be digested or otherwise absorbed by the latter without immediate or persistent ill effect. NMDCO_relaxed.owl RO:0009005 biolink:NamedThing has primary substance added 'has primary substance added' indicates that an entity has had the given substance added to it in a proportion greater than any other added substance. NMDCO_relaxed.owl RO:0009501 biolink:NamedThing realized in response to r 'realized in response to' s iff, r is a realizable (e.g. a plant trait such as responsivity to drought), s is an environmental stimulus (a process), and s directly causes the realization of r. NMDCO_relaxed.owl RO:0010001 biolink:NamedThing generically depends on A generically dependent continuant *b* generically depends on an independent continuant *c* at time *t* means: there inheres in *c* a specifically deendent continuant which concretizes *b* at *t*. NMDCO_relaxed.owl RO:0010002 biolink:NamedThing is carrier of *b* is carrier of *c* at time *t* if and only if *c* *g-depends on* *b* at *t* NMDCO_relaxed.owl RO:0011003 biolink:NamedThing regulates quantity of The entity A has an activity that regulates the quantity or abundance or concentration of the entity B. NMDCO_relaxed.owl RO:0011004 biolink:NamedThing indirectly regulates activity of The entity A is not immediately upstream of the entity B but A has an activity that regulates an activity performed by B. NMDCO_relaxed.owl RO:0011007 biolink:NamedThing decreases by repression quantity of The entity A has an activity that down-regulates by repression the quantity of B. The down-regulation is due to A having an effect on an intermediate entity (typically a DNA or mRNA element) which can produce B. For example, protein A (transcription factor) indirectly decreases by repression the quantity of protein B (gene product) if and only if A negatively regulates the process of transcription or translation of a nucleic acid element that produces B. NMDCO_relaxed.owl RO:0011023 biolink:NamedThing indirectly negatively regulates quantity of The entity A does not physically interact with the entity B, and A has an activity that down-regulates the quantity or abundance or concentration of B. NMDCO_relaxed.owl RO:0011008 biolink:NamedThing increases by expression quantity of The entity A has an activity that up-regulates by expression the quantity of B. The up-regulation is due to A having an effect on an intermediate entity (typically a DNA or mRNA element) which can produce B. For example, protein A (transcription factor) indirectly increases by expression the quantity of protein B (gene product) if and only if A positively regulates the process of transcription or translation of a nucleic acid element that produces B. NMDCO_relaxed.owl RO:0011024 biolink:NamedThing indirectly positively regulates quantity of The entity A does not physically interact with the entity B, and A has an activity that up-regulates the quantity or abundance or concentration of B. NMDCO_relaxed.owl RO:0011009 biolink:NamedThing directly positively regulates quantity of The entity A has an activity that directly positively regulates the quantity of B. NMDCO_relaxed.owl RO:0011021 biolink:NamedThing directly regulates quantity of The entity A, immediately upstream of B, has an activity that directly regulates the quantity of B. NMDCO_relaxed.owl RO:0011010 biolink:NamedThing directly negatively regulates quantity of The entity A has an activity that directly negatively regulates the quantity of B. NMDCO_relaxed.owl RO:0011013 biolink:NamedThing indirectly positively regulates activity of The entity A is not immediately upstream of the entity B and has an activity that up-regulates an activity performed by B. NMDCO_relaxed.owl RO:0011014 biolink:NamedThing destabilizes quantity of An entity A directly interacts with B and A has an activity that decreases the amount of an entity B by degradating it. NMDCO_relaxed.owl RO:0011015 biolink:NamedThing stabilizes quantity of An entity A physically interacts with B and A has an activity that increases the amount of an entity B by stabilizing it. NMDCO_relaxed.owl RO:0011016 biolink:NamedThing indirectly negatively regulates activity of The entity A is not immediately upstream of the entity B and has an activity that down-regulates an activity performed by B. NMDCO_relaxed.owl RO:0011022 biolink:NamedThing indirectly regulates quantity of The entity A is not immediately upstream of the entity B, but A has an activity that regulates the quantity or abundance or concentration of B. NMDCO_relaxed.owl RO:0012000 biolink:NamedThing has small molecule regulator a relation between a process and a continuant, in which the process is regulated by the small molecule continuant NMDCO_relaxed.owl RO:0012004 biolink:NamedThing is small molecule regulator of a relation between a continuant and a process, in which the continuant is a small molecule that regulates the process NMDCO_relaxed.owl ORCID:0000-0003-1813-6857 biolink:NamedThing Pascale Gaudet Canadian biocurator NMDCO_relaxed.owl RO:0012001 biolink:NamedThing has small molecule activator a relation between a process and a continuant, in which the process is activated by the small molecule continuant NMDCO_relaxed.owl RO:0012005 biolink:NamedThing is small molecule activator of a relation between a continuant and a process, in which the continuant is a small molecule that activates the process NMDCO_relaxed.owl RO:0012002 biolink:NamedThing has small molecule inhibitor a relation between a process and a continuant, in which the process is inhibited by the small molecule continuant NMDCO_relaxed.owl RO:0012006 biolink:NamedThing is small molecule inhibitor of a relation between a continuant and a process, in which the continuant is a small molecule that inhibits the process NMDCO_relaxed.owl RO:0012003 biolink:NamedThing acts on population of p acts on population of c iff c' is a collection, has members of type c, and p has participant c NMDCO_relaxed.owl RO:0012007 biolink:NamedThing results in adhesion of The relationship that links anatomical entities with a process that results in the adhesion of two or more entities via the non-covalent interaction of molecules expressed in, located in, and/or adjacent to, those entities. NMDCO_relaxed.owl RO:0012008 biolink:NamedThing results in fusion of NMDCO_relaxed.owl RO:0012009 biolink:NamedThing constitutively upstream of p is constitutively upstream of q iff p is causally upstream of q, p is required for execution of q or a part of q, and the execution of p is approximately constant. NMDCO_relaxed.owl RO:0012010 biolink:NamedThing removes input for p removes input for q iff p is causally upstream of q, there exists some c such that p has_input c and q has_input c, p reduces the levels of c, and c is rate limiting for execution of q. NMDCO_relaxed.owl RO:0012011 biolink:NamedThing indirectly causally upstream of p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q. NMDCO_relaxed.owl RO:0012013 biolink:NamedThing positively regulates in another organism x 'positively regulates in other organism' y if and only if: (x is the realization of a function to increase the frequency, rate or extent of y) AND (the agents of x are produced by organism o1 and the agents of y are produced by organism o2). NMDCO_relaxed.owl RO:0012014 biolink:NamedThing negatively regulates in another organism x 'negatively regulates in other organism' y if and only if: (x is the realization of a function to reduce the frequency, rate or extent of y) AND (the agents of x are produced by organism o1 and the agents of y are produced by organism o2). NMDCO_relaxed.owl RO:0013001 biolink:NamedThing has synaptic IO in region A relationship between a neuron and a region, where the neuron has a functionally relevant number of input and/or output synapses in that region. NMDCO_relaxed.owl ORCID:0000-0002-1373-1705 biolink:NamedThing NMDCO_relaxed.owl RO:0013002 biolink:NamedThing receives synaptic input in region A relationship between a neuron and a region, where the neuron has a functionally relevant number of input synapses in that region. NMDCO_relaxed.owl RO:0013003 biolink:NamedThing sends synaptic output to region A relationship between a neuron and a region, where the neuron has a functionally relevant number of output synapses in that region. NMDCO_relaxed.owl RO:0013004 biolink:NamedThing has synaptic IO throughout A relationship between a neuron and a region, where the neuron has a functionally relevant number of input and/or output synapses distributed throughout that region (rather than confined to a subregion). NMDCO_relaxed.owl RO:0013005 biolink:NamedThing receives synaptic input throughout A relationship between a neuron and a region, where the neuron has a functionally relevant number of input synapses distributed throughout that region (rather than confined to a subregion). NMDCO_relaxed.owl RO:0013006 biolink:NamedThing sends synaptic output throughout A relationship between a neuron and a region, where the neuron has a functionally relevant number output synapses distributed throughout that region (rather than confined to a subregion). NMDCO_relaxed.owl RO:0013007 biolink:NamedThing has sensory dendrite in Relation between a sensory neuron and some structure in which it receives sensory input via a sensory dendrite. NMDCO_relaxed.owl RO:0013008 biolink:NamedThing receives synaptic input from neuron A relationship between an anatomical structure (including cells) and a neuron that has a functionally relevant number of chemical synapses to it. NMDCO_relaxed.owl RO:0013009 biolink:NamedThing sends synaptic output to cell A relationship between a neuron and a cell that it has a functionally relevant number of chemical synapses to. NMDCO_relaxed.owl RO:0014001 biolink:NamedThing disease has infectious agent A relationship between a disease and an infectious agent where the material basis of the disease is an infection with some infectious agent. NMDCO_relaxed.owl ORCID:0000-0001-5208-3432 biolink:NamedThing NMDCO_relaxed.owl RO:0015001 biolink:NamedThing has exemplar data A relation between a material entity and some data in which the data is taken as exemplifying the material entity. NMDCO_relaxed.owl owl:topObjectProperty biolink:NamedThing NMDCO_relaxed.owl RO:0015002 biolink:NamedThing exemplar data of NMDCO_relaxed.owl ORCID:0000-0002-5260-9315 biolink:NamedThing NMDCO_relaxed.owl RO:0015003 biolink:NamedThing subcluster of A relation between a group and another group it is part of but does not fully constitute. NMDCO_relaxed.owl ORCID:0000-0001-7258-9596 biolink:NamedThing Shawn Zheng Kai Tan researcher NMDCO_relaxed.owl RO:0015004 biolink:NamedThing has characterizing marker set A relation that applies between a cell type and a set of markers that can be used to uniquely identify that cell type. NMDCO_relaxed.owl RO:0015006 biolink:NamedThing different in magnitude relative to q1 different_in_magnitude_relative_to q2 if and only if magnitude(q1) NOT =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. NMDCO_relaxed.owl RO:0015007 biolink:NamedThing increased in magnitude relative to q1 increased_in_magnitude_relative_to q2 if and only if magnitude(q1) > magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. NMDCO_relaxed.owl RO:0015008 biolink:NamedThing decreased in magnitude relative to q1 decreased_in_magnitude_relative_to q2 if and only if magnitude(q1) < magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. NMDCO_relaxed.owl RO:0015009 biolink:NamedThing similar in magnitude relative to q1 similar_in_magnitude_relative_to q2 if and only if magnitude(q1) =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale. NMDCO_relaxed.owl RO:0015010 biolink:NamedThing has relative magnitude NMDCO_relaxed.owl RO:0015011 biolink:NamedThing has cross section s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2. NMDCO_relaxed.owl RO:0015012 biolink:NamedThing reciprocal of q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e. NMDCO_relaxed.owl RO:0015015 biolink:NamedThing has high plasma membrane amount A relation between a cell and molecule or complex such that every instance of the cell has a high number of instances of that molecule expressed on the cell surface. NMDCO_relaxed.owl ORCID:0000-0003-1940-6740 biolink:NamedThing Anna Maria Masci researcher NMDCO_relaxed.owl RO:0015016 biolink:NamedThing has low plasma membrane amount A relation between a cell and molecule or complex such that every instance of the cell has a low number of instances of that molecule expressed on the cell surface. NMDCO_relaxed.owl ORCID:0000-0002-7463-6306 biolink:NamedThing Lauren E. Chan researcher NMDCO_relaxed.owl RO:0016002 biolink:NamedThing has disease A relationship that holds between an organism and a disease. Here a disease is construed broadly as a disposition to undergo pathological processes that exists in an organism because of one or more disorders in that organism. NMDCO_relaxed.owl RO:0016004 biolink:NamedThing has exposure medium X has exposure medium Y if X is an exposure event (process), Y is a material entity, and the stimulus for X is transmitted or carried in Y. NMDCO_relaxed.owl